primitive gut
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
primitive gut
DEFINITON:
Four large phagocytic cells associated with the embryonic pharynx.
TERM DEFINITION CITATIONS:
PMID:28072387
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0002087
ABOUT THIS TERM:
primitive gut
↳is a extraembryonic organ and material entity ↳contained in oral hemisphere
↳existence ends during or before Stage 6
↳existence overlaps Stage 4, Stage 3, Stage 6 and Stage 5
↳existence starts during or after Stage 3
↳part of embryonic digestive system
→ primitive gut cell part of primitive gut
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in primitive gut. Click this link to learn more about PAGE.
PAGE Curations: 11
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence primitive gut SMED30015696 Macrophage-expressed gene 1 protein SMESG000067839.1 SMED30015696 smed_20140614 PMID:28072387
Davies et al., 2017 
primitive gut SMED30015696 Macrophage-expressed gene 1 protein SMESG000067839.1 SMED30015696 smed_20140614 PMID:28072387
Davies et al., 2017 
primitive gut SMED30004295 Elongation factor 1-alpha 1 SMED30004295 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30004295 Elongation factor 1-alpha 1 SMED30004295 smed_20140614 PMID:28072387
Davies et al., 2017 
primitive gut SMED30003202 Eukaryotic initiation factor 4A-like Protein SMED30003202 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30003202 Eukaryotic initiation factor 4A-like Protein SMED30003202 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30035691 Macrophage-expressed gene 1 protein SMESG000067839.1 SMED30015696 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30035691 Macrophage-expressed gene 1 protein SMESG000067839.1 SMED30015696 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30028442 Lysosomal alpha-glucosidase SMED30028442 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30028442 Lysosomal alpha-glucosidase SMED30028442 smed_20140614 PMID:28072387
Davies et al., 2017 primitive gut SMED30023322 Cathepsin L SMED30023322 smed_20140614 PMID:28072387
Davies et al., 2017
Note: Hover over icons to view figure legend
↳contained in oral hemisphere
↳existence ends during or before Stage 6
↳existence overlaps Stage 4, Stage 3, Stage 6 and Stage 5
↳existence starts during or after Stage 3
↳part of embryonic digestive system
→ primitive gut cell part of primitive gut
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in primitive gut. Click this link to learn more about PAGE.
PAGE Curations: 11
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| primitive gut | SMED30015696 | Macrophage-expressed gene 1 protein | SMESG000067839.1 | SMED30015696 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| primitive gut | SMED30015696 | Macrophage-expressed gene 1 protein | SMESG000067839.1 | SMED30015696 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| primitive gut | SMED30004295 | Elongation factor 1-alpha 1 | SMED30004295 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | | |
| primitive gut | SMED30004295 | Elongation factor 1-alpha 1 | SMED30004295 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | | |
| primitive gut | SMED30003202 | Eukaryotic initiation factor 4A-like Protein | SMED30003202 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | | |
| primitive gut | SMED30003202 | Eukaryotic initiation factor 4A-like Protein | SMED30003202 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | | |
| primitive gut | SMED30035691 | Macrophage-expressed gene 1 protein | SMESG000067839.1 | SMED30015696 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| primitive gut | SMED30035691 | Macrophage-expressed gene 1 protein | SMESG000067839.1 | SMED30015696 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| primitive gut | SMED30028442 | Lysosomal alpha-glucosidase | SMED30028442 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | | |
| primitive gut | SMED30028442 | Lysosomal alpha-glucosidase | SMED30028442 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | | |
| primitive gut | SMED30023322 | Cathepsin L | SMED30023322 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
