pharynx tip
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
pharynx tip
DEFINITON:
The distal-most end of the pharnyx containing an opening to the pharynx lumen.
TERM ID:
PLANA:0002074
ABOUT THIS TERM:
pharynx tip
↳is a independent continuant and tissue ↳existence overlaps juvenile stage, asexual adult and adult hermaphrodite
↳part of pharynx
DEPICTED BY:
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in pharynx tip. Click this link to learn more about PAGE.
PAGE Curations: 16
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence pharynx tip SMED30012954 centriolin SMESG000006866.1 JQ036183 smed_ncbi_20200123 PMID:22223737
Azimzadeh et al., 2012 
pharynx tip SMED30022468 secreted frizzled-related protein 1 SMESG000075831.1 SMESG000029446.1 SMED30022468 smed_20140614 PMID:20707997
Gurley et al., 2010 pharynx tip SMED30010623 1.G9.2 SMESG000033798.1 SMESG000033795.1 dd_Smed_v4_3199_0_1 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 
pharynx tip SMED30002682 1.G9.2 SMESG000033798.1 SMESG000033795.1 dd_Smed_v4_3199_0_1 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30006908 G_PROTEIN_RECEP_F1_2 domain-containing protein SMESG000060818.1 dd_24149 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30016422 2-oxoisovalerate dehydrogenase subunit alpha SMESG000021412.1 dd_10732 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30003292 SMED30003292 SMESG000066258.1 dd_19593 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30005033 vinculin SMESG000028193.1 dd_3542 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30032615 SMED30032615 dd_77162 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30022406 Non-SMC condensin II complex subunit G2 dd_83746 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30025099 SMED30025099 SMESG000043295.1 dd_3524 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30026493 TPA_inf: pyrokinin prohormone like-1 SMESG000013290.1 dd_Smed_v4_14095_0_1 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30033618 SMED30033618 SMESG000042343.1 dd_3011 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 pharynx tip SMED30022468 secreted frizzled-related protein 1 SMESG000075831.1 SMESG000029446.1 dd_Smed_v6_13985_0_1 dd_Smed_v6 PMID:28171748
Stückemann et al., 2017 pharynx tip SMED30025215 Fzd-1/2/7 SMESG000040115.1 dd_Smed_v6_6353_0_1 dd_Smed_v6 PMID:28171748
Stückemann et al., 2017 pharynx tip SMED30022468 secreted frizzled-related protein 1 SMESG000075831.1 SMESG000029446.1 EU296635.1 smed_ncbi_20200123 PMID:27074666
Lander et al., 2016
Note: Hover over icons to view figure legend
↳existence overlaps juvenile stage, asexual adult and adult hermaphrodite
↳part of pharynx
DEPICTED BY:
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in pharynx tip. Click this link to learn more about PAGE.
PAGE Curations: 16
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| pharynx tip | SMED30012954 | centriolin | SMESG000006866.1 | JQ036183 | smed_ncbi_20200123 | PMID:22223737 Azimzadeh et al., 2012 | | | |
| pharynx tip | SMED30022468 | secreted frizzled-related protein 1 | SMESG000075831.1 SMESG000029446.1 | SMED30022468 | smed_20140614 | PMID:20707997 Gurley et al., 2010 | | | |
| pharynx tip | SMED30010623 | 1.G9.2 | SMESG000033798.1 SMESG000033795.1 | dd_Smed_v4_3199_0_1 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30002682 | 1.G9.2 | SMESG000033798.1 SMESG000033795.1 | dd_Smed_v4_3199_0_1 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30006908 | G_PROTEIN_RECEP_F1_2 domain-containing protein | SMESG000060818.1 | dd_24149 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30016422 | 2-oxoisovalerate dehydrogenase subunit alpha | SMESG000021412.1 | dd_10732 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30003292 | SMED30003292 | SMESG000066258.1 | dd_19593 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30005033 | vinculin | SMESG000028193.1 | dd_3542 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30032615 | SMED30032615 | dd_77162 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | | |
| pharynx tip | SMED30022406 | Non-SMC condensin II complex subunit G2 | dd_83746 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | | |
| pharynx tip | SMED30025099 | SMED30025099 | SMESG000043295.1 | dd_3524 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30026493 | TPA_inf: pyrokinin prohormone like-1 | SMESG000013290.1 | dd_Smed_v4_14095_0_1 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30033618 | SMED30033618 | SMESG000042343.1 | dd_3011 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| pharynx tip | SMED30022468 | secreted frizzled-related protein 1 | SMESG000075831.1 SMESG000029446.1 | dd_Smed_v6_13985_0_1 | dd_Smed_v6 | PMID:28171748 Stückemann et al., 2017 | | | |
| pharynx tip | SMED30025215 | Fzd-1/2/7 | SMESG000040115.1 | dd_Smed_v6_6353_0_1 | dd_Smed_v6 | PMID:28171748 Stückemann et al., 2017 | | | |
| pharynx tip | SMED30022468 | secreted frizzled-related protein 1 | SMESG000075831.1 SMESG000029446.1 | EU296635.1 | smed_ncbi_20200123 | PMID:27074666 Lander et al., 2016 | | | |
