chromatoid body
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
chromatoid body
DEFINITON:
A membrane-less, cytoplasmic ribonucleoprotein granule present in neoblasts and germ cells implicated in post-transcriptional regulation. The RNA helicase DHH1/RCK, Tudor, SmB, methylated substrates of PRMT5, PIWI-3 and Germinal Histone H4 localize to chromatoid bodies in neoblasts.
TERM DEFINITION CITATIONS:
PMID:24903754, PMID:22318224
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0002020
ABOUT THIS TERM:
chromatoid body
↳is a non-membrane-bounded organelle
DEPICTED BY:
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in chromatoid body. Click this link to learn more about PAGE.
PAGE Curations: 9
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence chromatoid body SMED30009514 histone H2B SMESG000067931.1 KC916781 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30016975 histone H2A SMESG000049774.1 KC916780 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30000270 Histone H3 SMESG000049112.1 SMESG000049109.1 KC916784 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30017680 Histone H3 SMESG000013634.1 KC916783 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30027563 Ras and EF-hand domain-containing protein homolog SMESG000049774.1 KC916780 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30021776 Histone H3 SMESG000074574.1 SMESG000074479.1 KC916782 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30033466 Histone H4 SMESG000070504.1 SMESG000070501.1 SMESG000011051.1 DN297663.1 ncbi_smed_ests PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30033466 Histone H4 SMESG000070504.1 SMESG000070501.1 SMESG000011051.1 KC916777 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
chromatoid body SMED30029763 histone H1 SMESG000024348.1 SMESG000010800.1 KC916779 smed_ncbi_20200123 PMID:24903754
Rouhana et al., 2014
Note: Hover over icons to view figure legend
DEPICTED BY:
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in chromatoid body. Click this link to learn more about PAGE.
PAGE Curations: 9
PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
---|---|---|---|---|---|---|---|---|---|
chromatoid body | SMED30009514 | histone H2B | SMESG000067931.1 | KC916781 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30016975 | histone H2A | SMESG000049774.1 | KC916780 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30000270 | Histone H3 | SMESG000049112.1 SMESG000049109.1 | KC916784 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30017680 | Histone H3 | SMESG000013634.1 | KC916783 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30027563 | Ras and EF-hand domain-containing protein homolog | SMESG000049774.1 | KC916780 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30021776 | Histone H3 | SMESG000074574.1 SMESG000074479.1 | KC916782 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30033466 | Histone H4 | SMESG000070504.1 SMESG000070501.1 SMESG000011051.1 | DN297663.1 | ncbi_smed_ests | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30033466 | Histone H4 | SMESG000070504.1 SMESG000070501.1 SMESG000011051.1 | KC916777 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |
chromatoid body | SMED30029763 | histone H1 | SMESG000024348.1 SMESG000010800.1 | KC916779 | smed_ncbi_20200123 | PMID:24903754 Rouhana et al., 2014 | ![]() | ![]() | ![]() |