lateral branch
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
lateral branch
DEFINITON:
Nerve branches that extend from the lateral side of each cephalic ganglia lobe. Each lobe has nine lateral branches which terminate in sensory organs. Evidence suggests they play a role in chemosensation.
TERM DEFINITION CITATIONS:
PMID:12128224, PMID:4452894, PMID:18466009, PMID:9493832, PMID:27612384
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0000461
ABOUT THIS TERM:
lateral branch
↳is a material entity and tissue ↳contained in ventral region of the whole animal, head region and anterior region of the whole animal
↳existence overlaps juvenile stage, asexual adult and adult hermaphrodite
↳part of cephalic ganglia
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in lateral branch. Click this link to learn more about PAGE.
PAGE Curations: 28
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence lateral branch SMED30005718 Guanine nucleotide-binding protein G(I) subunit alpha SMESG000026774.1 dd_Smed_v4_12112_0_1 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 
lateral branch SMED30000428 Glutathione S-transferase SMESG000016836.1 dd_Smed_v4_816_0_1 dd_Smed_v4 PMID:29674431
Fincher et al., 2018 lateral branch SMED30005718 Guanine nucleotide-binding protein G(I) subunit alpha SMESG000026774.1 HQ121519.1 smed_ncbi_20200123 PMID:21282632
Almuedo-Castillo et al., 2011 
lateral branch SMED30014799 Friend leukemia integration 1 SMESG000080027.1 Contig33356 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30014799 Friend leukemia integration 1 SMESG000080027.1 Contig33356 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30015600 BED-type domain-containing protein SMESG000080027.1 Contig33356 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30015600 BED-type domain-containing protein SMESG000080027.1 Contig33356 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30004979 SWIM-type domain-containing protein Contig40435 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30004979 SWIM-type domain-containing protein Contig40435 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30019914 Disks large homolog 1 SMESG000034854.1 Contig21285 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30019914 Disks large homolog 1 SMESG000034854.1 Contig21285 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30003783 Transcription factor 7-like 1 SMESG000059443.1 Contig55186 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30003783 Transcription factor 7-like 1 SMESG000059443.1 Contig55186 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30009090 Mushroom body large-type Kenyon-related protein SMESG000070784.1 Contig45195 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30009090 Mushroom body large-type Kenyon-related protein SMESG000070784.1 Contig45195 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30028543 Neur_chan_LBD domain-containing protein SMESG000021796.1 Contig16482 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30028543 Neur_chan_LBD domain-containing protein SMESG000021796.1 Contig16482 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30028730 LRP2-binding protein SMESG000050759.1 Contig18712 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30028730 LRP2-binding protein SMESG000050759.1 Contig18712 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30029329 cdc45-like protein Contig40435 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30029329 cdc45-like protein Contig40435 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30021257 Synaptic vesicle 2-related protein SMESG000069049.1 SMESG000069045.1 Contig47858 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30021257 Synaptic vesicle 2-related protein SMESG000069049.1 SMESG000069045.1 Contig47858 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30033309 slc35f-3 SMESG000077930.1 Contig28795 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30033309 slc35f-3 SMESG000077930.1 Contig28795 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30027052 noggin-like protein 1 SMESG000032255.1 Contig49725 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30027052 noggin-like protein 1 SMESG000032255.1 Contig49725 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 lateral branch SMED30027052 noggin-like protein 1 SMESG000032255.1 EF633691.1 smed_ncbi_20200123 PMID:19174194
Molina et al., 2009
Note: Hover over icons to view figure legend
↳contained in ventral region of the whole animal, head region and anterior region of the whole animal
↳existence overlaps juvenile stage, asexual adult and adult hermaphrodite
↳part of cephalic ganglia
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in lateral branch. Click this link to learn more about PAGE.
PAGE Curations: 28
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| lateral branch | SMED30005718 | Guanine nucleotide-binding protein G(I) subunit alpha | SMESG000026774.1 | dd_Smed_v4_12112_0_1 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| lateral branch | SMED30000428 | Glutathione S-transferase | SMESG000016836.1 | dd_Smed_v4_816_0_1 | dd_Smed_v4 | PMID:29674431 Fincher et al., 2018 | | | |
| lateral branch | SMED30005718 | Guanine nucleotide-binding protein G(I) subunit alpha | SMESG000026774.1 | HQ121519.1 | smed_ncbi_20200123 | PMID:21282632 Almuedo-Castillo et al., 2011 | | | |
| lateral branch | SMED30014799 | Friend leukemia integration 1 | SMESG000080027.1 | Contig33356 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30014799 | Friend leukemia integration 1 | SMESG000080027.1 | Contig33356 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30015600 | BED-type domain-containing protein | SMESG000080027.1 | Contig33356 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30015600 | BED-type domain-containing protein | SMESG000080027.1 | Contig33356 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30004979 | SWIM-type domain-containing protein | Contig40435 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | | |
| lateral branch | SMED30004979 | SWIM-type domain-containing protein | Contig40435 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | | |
| lateral branch | SMED30019914 | Disks large homolog 1 | SMESG000034854.1 | Contig21285 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30019914 | Disks large homolog 1 | SMESG000034854.1 | Contig21285 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30003783 | Transcription factor 7-like 1 | SMESG000059443.1 | Contig55186 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30003783 | Transcription factor 7-like 1 | SMESG000059443.1 | Contig55186 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30009090 | Mushroom body large-type Kenyon-related protein | SMESG000070784.1 | Contig45195 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30009090 | Mushroom body large-type Kenyon-related protein | SMESG000070784.1 | Contig45195 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30028543 | Neur_chan_LBD domain-containing protein | SMESG000021796.1 | Contig16482 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30028543 | Neur_chan_LBD domain-containing protein | SMESG000021796.1 | Contig16482 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30028730 | LRP2-binding protein | SMESG000050759.1 | Contig18712 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30028730 | LRP2-binding protein | SMESG000050759.1 | Contig18712 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30029329 | cdc45-like protein | Contig40435 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | | |
| lateral branch | SMED30029329 | cdc45-like protein | Contig40435 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | | |
| lateral branch | SMED30021257 | Synaptic vesicle 2-related protein | SMESG000069049.1 SMESG000069045.1 | Contig47858 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30021257 | Synaptic vesicle 2-related protein | SMESG000069049.1 SMESG000069045.1 | Contig47858 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30033309 | slc35f-3 | SMESG000077930.1 | Contig28795 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30033309 | slc35f-3 | SMESG000077930.1 | Contig28795 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30027052 | noggin-like protein 1 | SMESG000032255.1 | Contig49725 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30027052 | noggin-like protein 1 | SMESG000032255.1 | Contig49725 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| lateral branch | SMED30027052 | noggin-like protein 1 | SMESG000032255.1 | EF633691.1 | smed_ncbi_20200123 | PMID:19174194 Molina et al., 2009 | | | |
