germ cell
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
germ cell
DEFINITON:
1. A gamete (as an egg or sperm cell) or one of its antecedent cells. 2. A mature male or female germ cell usually possessing a haploid chromosome set and capable of initiating formation of a new diploid individual by fusion with a gamete of the opposite sex.
TERM DEFINITION CITATIONS:
BTO:0000535
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0000227
ABOUT THIS TERM:
germ cell
↳is a cell ↳part of reproductive system
Expand to see terms that is a germ cell
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in germ cell. Click this link to learn more about PAGE.
PAGE Curations: 5
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence germ cell SMED30006325 DNA methyl-transferase SMESG000017337.1 KF664583 smed_ncbi_20200123 PMID:24063805
Jaber-Hijazi et al., 2013 
germ cell SMED30021639 SMED30021639 SMESG000074722.1 Contig31883 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 
germ cell SMED30021639 SMED30021639 SMESG000074722.1 Contig31883 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 germ cell SMED30024217 SMED30024217 SMESG000065539.1 Contig43317 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 germ cell SMED30024217 SMED30024217 SMESG000065539.1 Contig43317 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016
Note: Hover over icons to view figure legend
↳part of reproductive system
Expand to see terms that is a germ cell
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in germ cell. Click this link to learn more about PAGE.
PAGE Curations: 5
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| germ cell | SMED30006325 | DNA methyl-transferase | SMESG000017337.1 | KF664583 | smed_ncbi_20200123 | PMID:24063805 Jaber-Hijazi et al., 2013 | | | |
| germ cell | SMED30021639 | SMED30021639 | SMESG000074722.1 | Contig31883 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| germ cell | SMED30021639 | SMED30021639 | SMESG000074722.1 | Contig31883 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| germ cell | SMED30024217 | SMED30024217 | SMESG000065539.1 | Contig43317 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| germ cell | SMED30024217 | SMED30024217 | SMESG000065539.1 | Contig43317 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
