spermatid
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
spermatid
DEFINITON:
A male germ cell that develops from the haploid secondary spermatocytes. Without further division, spermatids undergo structural changes and give rise to spermatozoa.
TERM DEFINITION CITATIONS:
CL:0000018
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0000222
ABOUT THIS TERM:
spermatid
↳is a male germ cell and material entity ↳contained in tail region, copulatory region, posterior region of the whole animal, parapharyngeal region, prepharyngeal region, dorsal region of the whole animal and anterior region of the whole animal
↳existence overlaps adult hermaphrodite
↳part of testis
→ elongate spermatid and round spermatid is a spermatid
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in spermatid. Click this link to learn more about PAGE.
PAGE Curations: 18
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence spermatid SMED30008848 TPA_inf: insulin-like prohormone-1 SMESG000080685.1 BK007034 smed_ncbi_20200123 PMID:22252538
Miller et al., 2012 
spermatid SMED30015977 HMG box domain-containing protein SMESG000021063.1 DN307831.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30000951 TPA_inf: Y box protein 4-like protein SMESG000076962.1 BK007100 smed_ncbi_20200123 PMID:22074376
Chong et al., 2011 spermatid SMED30019363 SMED30019363 SMESG000076903.1 DN311232.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30019363 SMED30019363 SMESG000076903.1 HO005509.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30016584 cAMP-dependent protein kinase type II regulatory subunit SMESG000023850.1 DN316100.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30016584 cAMP-dependent protein kinase type II regulatory subunit SMESG000023850.1 HO007035.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30034273 Serine/threonine protein phosphatase 2A regulatory subunit SMESG000075769.1 DN315773.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30034273 Serine/threonine protein phosphatase 2A regulatory subunit SMESG000075769.1 HO006984.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30021934 Plastin-3 SMESG000042101.1 DN311193.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30021934 Plastin-3 SMESG000042101.1 HO007660.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30027985 Phosphodiesterase SMESG000053281.1 DN313728.1 ncbi_smed_ests PMID:22074376
Chong et al., 2011 spermatid SMED30021934 Plastin-3 SMESG000042101.1 DN311193 ncbi_smed_ests PMID:17376870
Wang et al., 2007 
spermatid SMED30011677 RRM domain-containing protein SMESG000018666.1 KU519616 smed_ncbi_20200123 PMID:27330085
Iyer et al., 2016 spermatid SMED30017509 Boule 2 RNA-binding protein SMESG000061507.1 KU519617 smed_ncbi_20200123 PMID:27330085
Iyer et al., 2016 spermatid SMED30020626 RRM domain-containing protein SMESG000018666.1 KU519616 smed_ncbi_20200123 PMID:27330085
Iyer et al., 2016 spermatid SMED30003873 nuclear factor Y subunit B SMESG000017262.1 HM100653 smed_ncbi_20200123 PMID:20844018
Wang et al., 2010 spermatid SMED30024486 cytoplasmic poly(A) binding protein SMESG000004978.1 HM100651 smed_ncbi_20200123 PMID:20844018
Wang et al., 2010
Note: Hover over icons to view figure legend
↳contained in tail region, copulatory region, posterior region of the whole animal, parapharyngeal region, prepharyngeal region, dorsal region of the whole animal and anterior region of the whole animal
↳existence overlaps adult hermaphrodite
↳part of testis
→ elongate spermatid and round spermatid is a spermatid
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in spermatid. Click this link to learn more about PAGE.
PAGE Curations: 18
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| spermatid | SMED30008848 | TPA_inf: insulin-like prohormone-1 | SMESG000080685.1 | BK007034 | smed_ncbi_20200123 | PMID:22252538 Miller et al., 2012 | | | |
| spermatid | SMED30015977 | HMG box domain-containing protein | SMESG000021063.1 | DN307831.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30000951 | TPA_inf: Y box protein 4-like protein | SMESG000076962.1 | BK007100 | smed_ncbi_20200123 | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30019363 | SMED30019363 | SMESG000076903.1 | DN311232.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30019363 | SMED30019363 | SMESG000076903.1 | HO005509.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30016584 | cAMP-dependent protein kinase type II regulatory subunit | SMESG000023850.1 | DN316100.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30016584 | cAMP-dependent protein kinase type II regulatory subunit | SMESG000023850.1 | HO007035.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30034273 | Serine/threonine protein phosphatase 2A regulatory subunit | SMESG000075769.1 | DN315773.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30034273 | Serine/threonine protein phosphatase 2A regulatory subunit | SMESG000075769.1 | HO006984.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30021934 | Plastin-3 | SMESG000042101.1 | DN311193.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30021934 | Plastin-3 | SMESG000042101.1 | HO007660.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30027985 | Phosphodiesterase | SMESG000053281.1 | DN313728.1 | ncbi_smed_ests | PMID:22074376 Chong et al., 2011 | | | |
| spermatid | SMED30021934 | Plastin-3 | SMESG000042101.1 | DN311193 | ncbi_smed_ests | PMID:17376870 Wang et al., 2007 | | | |
| spermatid | SMED30011677 | RRM domain-containing protein | SMESG000018666.1 | KU519616 | smed_ncbi_20200123 | PMID:27330085 Iyer et al., 2016 | | | |
| spermatid | SMED30017509 | Boule 2 RNA-binding protein | SMESG000061507.1 | KU519617 | smed_ncbi_20200123 | PMID:27330085 Iyer et al., 2016 | | | |
| spermatid | SMED30020626 | RRM domain-containing protein | SMESG000018666.1 | KU519616 | smed_ncbi_20200123 | PMID:27330085 Iyer et al., 2016 | | | |
| spermatid | SMED30003873 | nuclear factor Y subunit B | SMESG000017262.1 | HM100653 | smed_ncbi_20200123 | PMID:20844018 Wang et al., 2010 | | | |
| spermatid | SMED30024486 | cytoplasmic poly(A) binding protein | SMESG000004978.1 | HM100651 | smed_ncbi_20200123 | PMID:20844018 Wang et al., 2010 | | | |
