spermatogonial stem cell
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
spermatogonial stem cell
DEFINITON:
gh4+, nanos+ cells residing at the testis periphery that self-renew and give rise to differentiating daughters that will ultimately produce haploid sperm.
TERM DEFINITION CITATIONS:
PMID:27330085, PMID:27163480, PMID:19022767, PMID:20844018
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0000219
ABOUT THIS TERM:
spermatogonial stem cell
↳is a male germ cell, material entity and stem cell ↳contained in tail region, copulatory region, posterior region of the whole animal, parapharyngeal region, prepharyngeal region, dorsal region of the whole animal and anterior region of the whole animal
↳develops from neoblast
↳existence overlaps juvenile stage and adult hermaphrodite
↳existence starts during or after juvenile stage
↳part of testis
→ spermatogonium develops from spermatogonial stem cell
Expand to see terms that is a spermatogonial stem cell
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in spermatogonial stem cell. Click this link to learn more about PAGE.
PAGE Curations: 17
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence spermatogonial stem cell SMED30018729 T-complex protein subunit epsilon SMESG000012740.1 MF669567.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30015115 SMED30015115 SMESG000078668.1 MF669566.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30011774 T-complex protein 1 subunit theta SMESG000009544.1 MF669571.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30015458 T-complex protein 1 subunit delta SMESG000060610.1 MF669565.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30006002 T-complex protein 1 subunit gamma SMESG000066978.1 MF669563.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30021699 T-complex protein 1 subunit beta SMESG000016726.1 MF669562.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30022614 T-complex protein 1 subunit alpha SMESG000067696.1 MF669561.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30030988 T-complex protein 1 subunit theta SMESG000023665.1 MF669570.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30025525 T-complex protein 1 subunit gamma SMESG000075311.1 MF669564.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30030151 T-complex protein 1 subunit zeta SMESG000049015.1 MF669568.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30033996 T-complex protein 1 subunit eta SMESG000079886.1 MF669569.1 smed_ncbi_20200123 PMID:29095551
Counts et al., 2017
spermatogonial stem cell SMED30017509 Boule 2 RNA-binding protein SMESG000061507.1 KT709533.1 smed_ncbi_20200123 PMID:27149082
Steiner et al., 2016
spermatogonial stem cell SMED30017509 Boule 2 RNA-binding protein SMESG000061507.1 KU519617 smed_ncbi_20200123 PMID:27149082
Steiner et al., 2016
spermatogonial stem cell SMED30011677 RRM domain-containing protein SMESG000018666.1 KU519616 smed_ncbi_20200123 PMID:27330085
Iyer et al., 2016
spermatogonial stem cell SMED30017509 Boule 2 RNA-binding protein SMESG000061507.1 KU519617 smed_ncbi_20200123 PMID:27330085
Iyer et al., 2016
spermatogonial stem cell SMED30020626 RRM domain-containing protein SMESG000018666.1 KU519616 smed_ncbi_20200123 PMID:27330085
Iyer et al., 2016
spermatogonial stem cell SMED30011351 Glyceraldehyde-3-phosphate dehydrogenase SMESG000034925.1 Contig6300_SE3 GPL10652 PMID:20844018
Wang et al., 2010
Note: Hover over icons to view figure legend
↳contained in tail region, copulatory region, posterior region of the whole animal, parapharyngeal region, prepharyngeal region, dorsal region of the whole animal and anterior region of the whole animal
↳develops from neoblast
↳existence overlaps juvenile stage and adult hermaphrodite
↳existence starts during or after juvenile stage
↳part of testis
→ spermatogonium develops from spermatogonial stem cell
Expand to see terms that is a spermatogonial stem cell
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in spermatogonial stem cell. Click this link to learn more about PAGE.
PAGE Curations: 17
PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
---|---|---|---|---|---|---|---|---|---|
spermatogonial stem cell | SMED30018729 | T-complex protein subunit epsilon | SMESG000012740.1 | MF669567.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30015115 | SMED30015115 | SMESG000078668.1 | MF669566.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30011774 | T-complex protein 1 subunit theta | SMESG000009544.1 | MF669571.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30015458 | T-complex protein 1 subunit delta | SMESG000060610.1 | MF669565.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30006002 | T-complex protein 1 subunit gamma | SMESG000066978.1 | MF669563.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30021699 | T-complex protein 1 subunit beta | SMESG000016726.1 | MF669562.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30022614 | T-complex protein 1 subunit alpha | SMESG000067696.1 | MF669561.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30030988 | T-complex protein 1 subunit theta | SMESG000023665.1 | MF669570.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30025525 | T-complex protein 1 subunit gamma | SMESG000075311.1 | MF669564.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30030151 | T-complex protein 1 subunit zeta | SMESG000049015.1 | MF669568.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30033996 | T-complex protein 1 subunit eta | SMESG000079886.1 | MF669569.1 | smed_ncbi_20200123 | PMID:29095551 Counts et al., 2017 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30017509 | Boule 2 RNA-binding protein | SMESG000061507.1 | KT709533.1 | smed_ncbi_20200123 | PMID:27149082 Steiner et al., 2016 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30017509 | Boule 2 RNA-binding protein | SMESG000061507.1 | KU519617 | smed_ncbi_20200123 | PMID:27149082 Steiner et al., 2016 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30011677 | RRM domain-containing protein | SMESG000018666.1 | KU519616 | smed_ncbi_20200123 | PMID:27330085 Iyer et al., 2016 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30017509 | Boule 2 RNA-binding protein | SMESG000061507.1 | KU519617 | smed_ncbi_20200123 | PMID:27330085 Iyer et al., 2016 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30020626 | RRM domain-containing protein | SMESG000018666.1 | KU519616 | smed_ncbi_20200123 | PMID:27330085 Iyer et al., 2016 | ![]() | ![]() | ![]() |
spermatogonial stem cell | SMED30011351 | Glyceraldehyde-3-phosphate dehydrogenase | SMESG000034925.1 | Contig6300_SE3 | GPL10652 | PMID:20844018 Wang et al., 2010 | ![]() | ![]() | ![]() |