dorsal region of the whole animal

▻ Planarian Anatomy Ontology Class Overview

▻ PAGE: Planarian Anatomy Gene Expression




Planarian Anatomy Ontology Class Overview

For more information about the ontology visit PLANA Overview


NAME:

  dorsal region of the whole animal


DEFINITON:

  Three dimensional compartment along the dorsoventral axis that is above the anteroposterior axis, containing the eyes.


TERM ID:

  PLANA:0000141


ABOUT THIS TERM:

  ↳has component dorsal region

  ↳part of whole organism


Expand to see terms that contained in dorsal region of the whole animal

  → pharynx pouch epithelium
  → parenchyma
  → sperm duct lumen
  → testis somatic gonadal cell
  → sperm duct epithelial cell
  → collecting duct epithelial cell
  → distal tubule epithelial cell
  → proximal tubule epithelial cell
  → yolk cell
  → testis nerve plexus
  → rhabdomere
  → cintillo+ sensory neuron
  → rhabdome
  → glial cell
  → optic nerve
  → ommochrome pigment cell
  → medial muscle cell
  → melanosome
  → early male germ cell
  → digestive tract lumen
  → pharynx lumen
  → pharynx pouch cavity
  → neoblast
  → testis
  → male primordial germ cell
  → spermatogonial stem cell
  → spermatocyte
  → spermatid
  → spermatogonium
  → submuscular nerve plexus
  → subepidermal nerve plexus
  → cement gland
  → copulatory apparatus
  → serotonergic neuron
  → body wall musculature
  → photoreceptor neuron
  → Category 4 cell
  → protonephridia
  → Category 5 cell
  → Category 2 cell
  → gut
  → pigment cup cell
  → epidermis
  → Category 3 cell
  → eye
  → anterior primary gut branch
  → circular muscle cell
  → cephalic ganglia
  → collecting duct
  → diagonal muscle cell
  → distal tubule
  → dorsal stripe
  → flame bulb
  → goblet cell
  → anterior gut branch
  → flame cell
  → gastrodermis
  → auricle
  → inner longitudinal muscle cell
  → intestinal phagocyte
  → optic cup
  → outer longitudinal muscle cell
  → cephalic ganglia lobe
  → parenchymal musculature
  → Category 1 cell
  → proximal tubule
  → dorsal-ventral muscle cell
  → sperm

  → dorsal region of the epidermis is a dorsal region of the whole animal



DEPICTED BY:


BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):

Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.



EXPLORE ONTOLOGY GRAPH:


Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.


PAGE: Planarian Anatomy Gene Expression

These transcripts were reported as being expressed in dorsal region of the whole animal. Click this link to learn more about PAGE.


PAGE Curations: 37


PLANA TermReference TranscriptDescriptionGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
dorsal region of the whole animalSMED30014877BMPSMESG000013937.1 ABV04322.1smed_ncbi_20200123PMID:23318641
Chen et al., 2013
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30019039MetalloendopeptidaseSMESG000005882.1 H.14.4asmed_ncbi_20200123PMID:17942485
Reddien et al., 2007
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30009457reticulocalbin-1SMESG000034805.1 AY068175.1smed_ncbi_20200123PMID:20865784
Zayas et al., 2010
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30009457reticulocalbin-1SMESG000034805.1 AY068175.1smed_ncbi_20200123PMID:20865784
Zayas et al., 2010
whole organism asexual adult fluorescence in situ hybridization evidence
dorsal region of the whole animalSMED30026600SMED30026600SMESG000017972.1 AY067799smed_ncbi_20200123PMID:20865784
Zayas et al., 2010
whole organism asexual adult fluorescence in situ hybridization evidence
dorsal region of the whole animalSMED30026600SMED30026600SMESG000017972.1 AY067799smed_ncbi_20200123PMID:20865784
Zayas et al., 2010
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30035258transient receptor potential cation channel subfamily A member-1SMESG000035379.1 SMU15032241SMUPMID:28495872
Birkholz et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30003366distal-lessSMESG000045025.1 SMED30003366smed_20140614PMID:21852957
Lapan et al., 2011
whole organism asexual adult fluorescence in situ hybridization evidence
dorsal region of the whole animalSMED30005819bambiSMESG000054829.1 bambismed_ncbi_20200123PMID:21295483
Gaviño et al., 2011
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30014877BMPSMESG000013937.1 ABV04322.1smed_ncbi_20200123PMID:21295483
Gaviño et al., 2011
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30026932noggin-like protein 8SMESG000008387.1 FJ471490.1smed_ncbi_20200123PMID:19174194
Molina et al., 2009
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30026932noggin-like protein 8SMESG000008387.1 FJ471490smed_ncbi_20200123PMID:19174194
Molina et al., 2009
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30008728mitochondrial sodium/calcium exchanger proteinSMESG000022802.1 dd_Smed_v4_9904_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30018173Sodium/potassium-transporting ATPase subunit beta-1 isoform 2SMESG000064592.1 dd_Smed_v4_6559_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30013706Caspase-3SMESG000053166.1 dd_Smed_v4_4986_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30015111Guanylate cyclaseSMESG000005445.1 dd_Smed_v4_9955_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30019590notch-1SMESG000056635.1 dd_Smed_v4_4586_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30013820slc24a-2SMESG000022802.1 dd_Smed_v4_9904_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30018739SMED30018739SMESG000025343.1 SMESG000025332.1 dd_Smed_v4_6330_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30031844ADP-ribosylation factorSMESG000052735.1 dd_Smed_v4_6927_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30006062SMED30006062SMESG000017127.1 dd_Smed_v4_8536_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30005819bambiSMESG000054829.1 dd_Smed_v4_11062_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30002413SMED30002413SMESG000026174.1 dd_Smed_v4_13733_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30005249PhosphodiesteraseSMESG000020487.1 dd_Smed_v4_13304_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30010039SMED30010039SMESG000028503.1 dd_Smed_v4_12038_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30000485SMED30000485SMESG000069311.1 dd_Smed_v4_11840_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30001191Transcription factor Sox-2SMESG000067682.1 SMESG000060099.1 dd_Smed_v4_8104_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30007111SMED30007111SMESG000027823.1 SMESG000018075.1 dd_Smed_v4_14341_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30032395T-box transcription factor TBX2SMESG000061015.1 dd_Smed_v4_11693_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30028832SMED30028832SMESG000029027.1 dd_Smed_v4_10089_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30026726RING domain ligase2 isoform 3SMESG000003596.1 dd_Smed_v4_5871_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30027878Dynein light chainSMESG000042102.1 dd_Smed_v4_15092_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30029942GNAT family N-acetyltransferaseSMESG000036868.1 dd_Smed_v4_12435_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30028816F-box/LRR-repeat protein 7SMESG000053104.1 dd_Smed_v4_10647_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30019930mmp1 proteinSMESG000040780.1 SMESG000040772.1 HE577118.1smed_ncbi_20200123PMID:23405188
Isolani et al., 2013
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30019680mmp2 proteinSMESG000014326.1 HE577119.1smed_ncbi_20200123PMID:23405188
Isolani et al., 2013
whole organism asexual adult colorimetric in situ hybridization evidence
dorsal region of the whole animalSMED30003191Mmp2 proteinSMESG000014326.1 HE577119.1smed_ncbi_20200123PMID:23405188
Isolani et al., 2013
whole organism asexual adult colorimetric in situ hybridization evidence
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