stem cell
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
stem cell
DEFINITON:
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
TERM DEFINITION CITATIONS:
CL:0000034
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0000121
ABOUT THIS TERM:
stem cell
↳is a cell
Expand to see terms that is a stem cell
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in stem cell. Click this link to learn more about PAGE.
PAGE Curations: 32
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence stem cell SMED30005164 coe protein SMESG000069088.1 KF487109 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 
stem cell SMED30010251 Neurogenic differentiation factor SMESG000066244.1 DN305764 ncbi_smed_ests PMID:24173799
Cowles et al., 2013 stem cell SMED30011397 helix-loop-helix protein 1 KF487113 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30001195 da protein SMESG000032044.1 KF487093 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30010649 max-like protein x SMESG000025391.1 HO006087 ncbi_smed_ests PMID:24173799
Cowles et al., 2013 stem cell SMED30018700 mlxipl protein SMESG000000528.1 KF487097 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30005025 BHLH domain-containing protein SMESG000045286.1 KF487103 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30009683 hesl-3 protein SMESG000009969.1 KF487112 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30009973 mxi-1 protein SMESG000047681.1 KF487115 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30003618 mitfl-3 protein SMESG000009137.1 KF487119 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30029786 usf protein SMESG000064300.1 KF487123 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30025473 mxi-2 protein SMESG000060394.1 KF487116 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30028985 SMED30028985 SMESG000062657.1 DN308448 ncbi_smed_ests PMID:24173799
Cowles et al., 2013 stem cell SMED30026172 srebp protein SMESG000056019.1 KF487122 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30033844 Transcription factor AP-4 SMESG000081049.1 HO007476 ncbi_smed_ests PMID:24173799
Cowles et al., 2013 stem cell SMED30003742 fer3l-2 protein SMESG000019274.1 KF487095 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30009207 musculin SMESG000018258.1 KF487098 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30005790 hesl-2 protein SMESG000068772.1 KF487111 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30000409 mitfl-2 protein SMESG000077129.1 KF487118 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30019204 BHLH domain-containing protein SMESG000018830.1 DN306140 ncbi_smed_ests PMID:24173799
Cowles et al., 2013 stem cell SMED30005182 ptf-4 protein SMESG000079648.1 KF487104 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30016826 fer3l-1 protein SMESG000029000.1 KF487094 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30006464 TCF15 SMESG000044395.1 AFD29618 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30008639 MyoD-like protein SMESG000034317.1 KF487099 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30002761 Transcription factor AP-4 SMESG000062271.1 DN305431 ncbi_smed_ests PMID:24173799
Cowles et al., 2013 stem cell SMED30010638 DNA-binding protein inhibitor ID-2 SMESG000017492.1 KF487114 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30006440 hesl-1 protein SMESG000053680.1 KF487110 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30002500 achaete-scute homolog 3 SMESG000032619.1 KF487091 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30034009 Pancreas transcription factor 1 subunit alpha SMESG000044960.1 KF487101 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30021317 sim protein SMESG000031846.1 KF487121 smed_ncbi_20200123 PMID:24173799
Cowles et al., 2013 stem cell SMED30002969 transcription factor 7-like 2 isoform X1 SMESG000009225.1 dd_Smed_v6_13056_0_1 dd_Smed_v6 PMID:29291981
Brown et al., 2018 stem cell SMED30006369 Integrin beta SMESG000045564.1 KU961518 smed_ncbi_20200123 PMID:28137894
Seebeck et al., 2017 
Note: Hover over icons to view figure legend
Expand to see terms that is a stem cell
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in stem cell. Click this link to learn more about PAGE.
PAGE Curations: 32
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| stem cell | SMED30005164 | coe protein | SMESG000069088.1 | KF487109 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30010251 | Neurogenic differentiation factor | SMESG000066244.1 | DN305764 | ncbi_smed_ests | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30011397 | helix-loop-helix protein 1 | KF487113 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | | |
| stem cell | SMED30001195 | da protein | SMESG000032044.1 | KF487093 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30010649 | max-like protein x | SMESG000025391.1 | HO006087 | ncbi_smed_ests | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30018700 | mlxipl protein | SMESG000000528.1 | KF487097 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30005025 | BHLH domain-containing protein | SMESG000045286.1 | KF487103 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30009683 | hesl-3 protein | SMESG000009969.1 | KF487112 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30009973 | mxi-1 protein | SMESG000047681.1 | KF487115 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30003618 | mitfl-3 protein | SMESG000009137.1 | KF487119 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30029786 | usf protein | SMESG000064300.1 | KF487123 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30025473 | mxi-2 protein | SMESG000060394.1 | KF487116 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30028985 | SMED30028985 | SMESG000062657.1 | DN308448 | ncbi_smed_ests | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30026172 | srebp protein | SMESG000056019.1 | KF487122 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30033844 | Transcription factor AP-4 | SMESG000081049.1 | HO007476 | ncbi_smed_ests | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30003742 | fer3l-2 protein | SMESG000019274.1 | KF487095 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30009207 | musculin | SMESG000018258.1 | KF487098 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30005790 | hesl-2 protein | SMESG000068772.1 | KF487111 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30000409 | mitfl-2 protein | SMESG000077129.1 | KF487118 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30019204 | BHLH domain-containing protein | SMESG000018830.1 | DN306140 | ncbi_smed_ests | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30005182 | ptf-4 protein | SMESG000079648.1 | KF487104 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30016826 | fer3l-1 protein | SMESG000029000.1 | KF487094 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30006464 | TCF15 | SMESG000044395.1 | AFD29618 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30008639 | MyoD-like protein | SMESG000034317.1 | KF487099 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30002761 | Transcription factor AP-4 | SMESG000062271.1 | DN305431 | ncbi_smed_ests | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30010638 | DNA-binding protein inhibitor ID-2 | SMESG000017492.1 | KF487114 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30006440 | hesl-1 protein | SMESG000053680.1 | KF487110 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30002500 | achaete-scute homolog 3 | SMESG000032619.1 | KF487091 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30034009 | Pancreas transcription factor 1 subunit alpha | SMESG000044960.1 | KF487101 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30021317 | sim protein | SMESG000031846.1 | KF487121 | smed_ncbi_20200123 | PMID:24173799 Cowles et al., 2013 | | | |
| stem cell | SMED30002969 | transcription factor 7-like 2 isoform X1 | SMESG000009225.1 | dd_Smed_v6_13056_0_1 | dd_Smed_v6 | PMID:29291981 Brown et al., 2018 | | | |
| stem cell | SMED30006369 | Integrin beta | SMESG000045564.1 | KU961518 | smed_ncbi_20200123 | PMID:28137894 Seebeck et al., 2017 | | | |
