pharynx pouch
▻ Planarian Anatomy Ontology Class Overview
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
pharynx pouch
DEFINITON:
An epithelial structure housing the pharynx, connected to the esophagus and mouth.
TERM DEFINITION CITATIONS:
OCLC:16809160
TERM CITATIONS:
Expand publication list
TERM ID:
PLANA:0000081
ABOUT THIS TERM:
pharynx pouch
↳is a material entity and tissue ↳contained in posterior region of the whole animal and parapharyngeal region
↳existence overlaps juvenile stage, asexual adult and adult hermaphrodite
↳part of pharynx
→ pharynx pouch epithelium and pharynx pouch cavity part of pharynx pouch
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in pharynx pouch. Click this link to learn more about PAGE.
PAGE Curations: 14
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence pharynx pouch SMED30015704 Hox class homeodomain protein DjAbd-Ba EU082823.1 smed_ncbi_20200123 PMID:25558068
Reuter et al., 2015
pharynx pouch SMED30005458 Phosphatidylinositol 4-kinase type 2-beta SMESG000074718.1 tr5_11049 mu_Smed_v1 PMID:25558068
Reuter et al., 2015
pharynx pouch SMED30012814 Protein CWC15-like protein SMESG000010770.1 SMESG000012375.1 tr5_7361 mu_Smed_v1 PMID:25558068
Reuter et al., 2015
pharynx pouch SMED30035066 axis inhibition protein B SMESG000025925.1 axinB smed_ncbi_20200123 PMID:25558068
Reuter et al., 2015
pharynx pouch SMED30027587 Ferritin SMESG000025375.1 tr5_10125 mu_Smed_v1 PMID:25558068
Reuter et al., 2015
pharynx pouch SMED30022963 anaphase-promoting complex subunit 1 SMESG000010770.1 SMESG000012375.1 tr5_7361 mu_Smed_v1 PMID:25558068
Reuter et al., 2015
pharynx pouch SMED30007710 wnt11-1 SMESG000005930.1 wnt11-1 smed_ncbi_20200123 PMID:25725068
Owen et al., 2015
pharynx pouch SMED30013810 Teashirt SMESG000008973.1 KP003815.1 smed_ncbi_20200123 PMID:25725068
Owen et al., 2015
pharynx pouch SMED30013810 Teashirt SMESG000008973.1 KP003815.1 smed_ncbi_20200123 PMID:25725068
Owen et al., 2015
pharynx pouch SMED30022043 Protein odd-skipped-related 2 SMESG000032229.1 SMED30022043 smed_20140614 PMID:29100657
Cheng et al., 2018
pharynx pouch SMED30023930 slit1 SMESG000068721.1 DQ336176 smed_ncbi_20200123 PMID:23318635
Blassberg et al., 2013
pharynx pouch SMED30031256 wntP-2 SMESG000066476.1 ABY85208.1 smed_ncbi_20200123 PMID:27074666
Lander et al., 2016
pharynx pouch SMED30020359 Smed-NDK-3 SMESG000046244.1 SMESG000046208.1 GU592832.1 smed_ncbi_20200123 PMID:27074666
Lander et al., 2016
pharynx pouch SMED30031256 wntP-2 SMESG000066476.1 EU296631.1 smed_ncbi_20200123 PMID:26556349
Sureda-Gómez et al., 2015
Note: Hover over icons to view figure legend
↳contained in posterior region of the whole animal and parapharyngeal region
↳existence overlaps juvenile stage, asexual adult and adult hermaphrodite
↳part of pharynx
→ pharynx pouch epithelium and pharynx pouch cavity part of pharynx pouch
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in pharynx pouch. Click this link to learn more about PAGE.
PAGE Curations: 14
PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
---|---|---|---|---|---|---|---|---|---|
pharynx pouch | SMED30015704 | Hox class homeodomain protein DjAbd-Ba | EU082823.1 | smed_ncbi_20200123 | PMID:25558068 Reuter et al., 2015 | ![]() | ![]() | ![]() | |
pharynx pouch | SMED30005458 | Phosphatidylinositol 4-kinase type 2-beta | SMESG000074718.1 | tr5_11049 | mu_Smed_v1 | PMID:25558068 Reuter et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30012814 | Protein CWC15-like protein | SMESG000010770.1 SMESG000012375.1 | tr5_7361 | mu_Smed_v1 | PMID:25558068 Reuter et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30035066 | axis inhibition protein B | SMESG000025925.1 | axinB | smed_ncbi_20200123 | PMID:25558068 Reuter et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30027587 | Ferritin | SMESG000025375.1 | tr5_10125 | mu_Smed_v1 | PMID:25558068 Reuter et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30022963 | anaphase-promoting complex subunit 1 | SMESG000010770.1 SMESG000012375.1 | tr5_7361 | mu_Smed_v1 | PMID:25558068 Reuter et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30007710 | wnt11-1 | SMESG000005930.1 | wnt11-1 | smed_ncbi_20200123 | PMID:25725068 Owen et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30013810 | Teashirt | SMESG000008973.1 | KP003815.1 | smed_ncbi_20200123 | PMID:25725068 Owen et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30013810 | Teashirt | SMESG000008973.1 | KP003815.1 | smed_ncbi_20200123 | PMID:25725068 Owen et al., 2015 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30022043 | Protein odd-skipped-related 2 | SMESG000032229.1 | SMED30022043 | smed_20140614 | PMID:29100657 Cheng et al., 2018 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30023930 | slit1 | SMESG000068721.1 | DQ336176 | smed_ncbi_20200123 | PMID:23318635 Blassberg et al., 2013 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30031256 | wntP-2 | SMESG000066476.1 | ABY85208.1 | smed_ncbi_20200123 | PMID:27074666 Lander et al., 2016 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30020359 | Smed-NDK-3 | SMESG000046244.1 SMESG000046208.1 | GU592832.1 | smed_ncbi_20200123 | PMID:27074666 Lander et al., 2016 | ![]() | ![]() | ![]() |
pharynx pouch | SMED30031256 | wntP-2 | SMESG000066476.1 | EU296631.1 | smed_ncbi_20200123 | PMID:26556349 Sureda-Gómez et al., 2015 | ![]() | ![]() | ![]() |