eye
▻ Planarian Anatomy Ontology Class Overview
▻ Embryonic Molecular Fate Mapping
▻ In Situ Hybridization Data
▻ Sequences
▻ PAGE: Planarian Anatomy Gene Expression
Planarian Anatomy Ontology Class Overview
For more information about the ontology visit PLANA Overview
NAME:
eye
DEFINITON:
An organ that detects light.
TERM DEFINITION CITATIONS:
UBERON:0000970
TERM CITATIONS:
Expand publication list
- PMID:25956527
- PMID:25254346
- PMID:26017970
- PMID:30237141
- PMID:26525673
- PMID:18063755
- PMID:19766622
- PMID:22125640
- PMID:29547123
- PMID:22318224
- PMID:17251262
- PMID:28171748
- PMID:22884275
- PMID:24238224
- PMID:27063937
- PMID:21747960
- ISBN:9780070316607
- PMID:30282036
- PMID:26618653
- UBERON:0000970
- PMID:19247960
- PMID:21458439
- PMID:24173799
- PMID:25356635
- PMID:18786419
- PMID:25772472
- PMID:18202849
- PMID:17905225
- PMID:18456843
- PMID:21295483
- PMID:28893948
- PMID:21937596
- PMID:21566185
- PMID:16311336
- PMID:25725068
- PMID:22411224
- PMID:23318641
- PMID:26556349
- PMID:20422023
- PMID:29674431
- PMID:27606067
- PMID:27240733
- PMID:27150006
- PMID:16890156
- PMID:24704339
- PMID:23629965
- PMID:21894189
- PMID:28976975
- PMID:29357350
- PMID:19174194
- PMID:29291981
- PMID:22385657
- PMID:29100657
- PMID:20967238
- PMID:30297872
- PMID:23903188
- PMID:19211673
- PMID:23318635
- PMID:29158443
- PMID:24950970
- PMID:25558068
- PMID:28216315
- PMID:20223763
- PMID:21282632
- PMID:26062938
- PMID:26114597
- PMID:28686611
- PMID:22549959
- PMID:24737865
- PMID:21179478
- PMID:21356107
- PMID:23235145
- PMID:24120894
- PMID:24415944
- PMID:21828097
- PMID:30485821
- PMID:24131630
- PMID:27654173
- PMID:20865784
- PMID:20040488
- PMID:20707997
- PMID:22479207
- PMID:27034770
- PMID:26711341
- PMID:26884331
- PMID:24992682
- PMID:25493551
- PMID:19805089
- PMID:29291974
- PMID:28287248
- PMID:28495872
- PMID:17553481
- PMID:23405188
- PMID:22445864
- PMID:30962434
- PMID:21295481
- PMID:27800171
- PMID:21806978
- PMID:18063757
- PMID:24063805
- PMID:19852954
- PMID:24922054
- PMID:22899852
- PMID:26457503
- PMID:15866156
- PMID:17942485
- PMID:23297191
- PMID:20215344
- PMID:19048075
- PMID:28292427
- PMID:15972844
- PMID:18287199
- PMID:21566195
- https://doi.org/10.1101/279364
- PMID:27551436
- PMID:29273738
- PMID:22439894
- PMID:21852957
- PMID:27542689
- PMID:30383829
- PMID:22339734
- PMID:20599901
- PMID:25017721
TERM ID:
PLANA:0000036
ABOUT THIS TERM:
eye
↳is a material entity and organ ↳contained in head region, dorsal region of the whole animal and anterior region of the whole animal
↳develops from trail cell
↳existence overlaps juvenile stage, asexual adult, adult hermaphrodite, Stage 8 and Stage 7
↳existence starts during or after Stage 7
↳part of central nervous system and visual system
→ posterior region of the eye and anterior region of the eye contained in eye
→ eye primordium develops into eye
Expand to see terms that part of eye
DEPICTED BY:
COMMENTS:
Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. The eyes are indicated by arrows. Scale bar = 250um
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
Embryonic Molecular Fate Mapping
All experimental data displayed here is from Davies et. al., 2017, Smed Embryogenesis Molecular Staging Resource
IN SITU HYBRIDIZATION DATA:
Smed ID Accession Name Alias Expressed during stage(s) Tissue/Pattern Images SMED30030594 Opsin opsin Stage 7, Stage 8 photoreceptor neuron, visual system, eye 
SMED30018592 AFP48372.1 ovo ovo Stage 6, Stage 7, Stage 8 trail cell, photoreceptor neuron, optic cup, pigment cup cell, visual system, eye 
SMED30006796 AFC87780.1 tyrosinase tyrosinase Stage 7, Stage 8 optic cup, pigment cup cell, visual system, eye 
Click to see image symbols and abbreviations
Abbreviation or symbol Definition O oral hemisphere A aboral hemisphere D dorsal V ventral L lateral black arrowhead embryonic pharynx red arrowhead definitive pharynx black arrows primitive gut yellow arrows primitive ectoderm cells cyan arrows brain cyan arrowheads nerve cords blue arrowheads eye progenitors (trail cells) purple arrowheads eyes scale bar 100 µm
SEQUENCES:
smed_20140614 transcript sequences for genes validated by in situ hybridization (above).
>SMED30006796 ID=SMED30006796|Name=tyrosinase|organism=Schmidtea mediterranea sexual|type=transcript|length=1755bp
TGTCAGTTTAGTCATGCTCGTAATCACAATAGGCATAGTCTTTGCATCTTTCTTACCTTTGAGTGACTGCCTAATCCCAA
GGATTTGCAGTAGGAATGTCACTCTTTCTAATTCAACATGTTGTCCAATTTATAATGATTTTGTTTGCGGTGGTCCTTTT
CGTGGATCTTGTGAAGTCTCCATTCTTTTTCAAAATCACACTGAGCACTCGGATGTTATCACCGGAAAATTGGAAAATGA
CGACAGACTCAACTGGCCATCAAGATTTTTTAAATTTCTTTGCAGTTGCAAGTCAAACTATGATGGAATAGCCTGTGACA
AGTGTAAATCAGGGTGGCAAGGGGAAAACTGTGAGGTGGTCTCCCCGAGAAAGATTAGACAAAATATTCTTAACATGAGA
TCATACGATGTTTTTATTTTTTTATCGATACTGAACATCAGCAAATATCAGTTGGCCGATTTCCTGATCACAAATTCGTC
CTCAAACCTTCACTGTGACCCTGTCAATGAAGACAACATTCAATTGGTCAATGCTTCCATTTATGATACAATGGTTTACT
TACATTTCTATGCGTCCAGGAGTACAATGTCTAAAGAACTTATGGAATCCTGCACAGACAAGGATAACAAATTAGACTTC
GCTCATAAAGGTCCAGCTTTTTTTACATGGCACCGACATTATTTACTGATGTTTGAAGACTTATTAAGGAGTATTGCAGT
CGAACAATTTGGATATTATAATTTCACATTACCATATTGGGACTGGACGAATCAAATAACTTGTAATATATGTACAAATG
ACTTACTTGGCGATATTCCCACTGAAGATCAAGAATCTAACAGCACATTTTTTAAATGGAAACCGATTTGCCCTCAGAAA
CCTAACGATTTTGATTGTCATATTTGCGATCCAAGCCAGGAAGAACCTTTTTTATGGAGAAAATACTCATCAACGGTAGA
CAGACTTCCTAATCAGAACGAAATTGATGAGTTATTCTCAATCAACCAATATGATTCGGAGCCCTTCAATTCCAGCTCAT
TTAGTAGGAAAAGCTTTCGGAATTTTGCAGAGGGATATTATCGAGTTCATCCAAACTCAGATGATATGAAAATGAAAGAC
ATTGGGAAGGGACTCCCCCATCAAAATATCATGATGCATAATATGTTTTATCAATGGAACTTGGATGGATTTCACAACGA
GTCCCAATGATCCATTATTTCTACTACATCATACGTTTATGGACAAAATCTTTGAAATTTGGCTATTAAGAAATAGACGA
TCTACATACCCTGGGAAATCTTCAACACCAATCGGGCAGCATGCTGACGATTTTATTGTGCCTTTCCTTCCACTAATCAG
AAACAGGAATTTGTTTACTTCAGCAAATGAATTTGGCTACGCCTACGATAACAATATTGTTGGAAATAAATTGTTCACAA
ATCATCAACTAGATTTCGAAAAGAGCTCATCGGAAATTTACTACATCCTAACGGCAGTTGCCTTTGTAGTACTAGTTGCG
ATCGTCGTCGGATTGTACTGCTTCAGACCCAGTCAAATCAGTCACACGGCTTATGAATTCATTGAAGACCAGGAGCAGGA
GGAAAAGACAAATTACTTTAACAACAATGAAAAAATGCCTCTACTGAAATGACAAGCCATTTCTGATGACTATTATAATA
TTGTCACCTTAAATTTTCTTTGAAACAACTTTATTATTGACAAATTTTGAAGAATCCTTTTAAGCAAAATAAAGT
>SMED30030594 ID=SMED30030594|Name=Opsin|organism=Schmidtea mediterranea sexual|type=transcript|length=1880bp
AATAAAATGAAATTTATAATGCCATTGGTATTTACACTGTGGTTAATAACGATAATAATCAGAATTTTTAATGATAAATA
TAGTAAACGATAACTAGTAACGGTAACCCTAATAATGAATGCTATATTACATATAGTAGTGTTACCAAAATTTTGGAATT
TAAAATAATAAGTTTATTATGAGTGACCATGATAATAAAAAAGATTTTTAAATAAAATGATAATATTACTATATAGTCGG
TTATAGTTCCGATTAGTCTACTATCGTAGACGTAATAAAAAGAGTTTAGTAACCTAATTTTCAATGTTTTTTGAAAGTTG
CTCGTCTCTATGGCAACTTATTATCGTAAGGAAAATTTTCTACTTCACTATGATATTTTCGGAGTGAATTTATTGATTTA
CATTCAAGGACTTTCACTATTGCATTTACTGAAGCGATCGTTTCATTTGGAACTCATATTTTCGCCCCTAATCGTTCTGG
AATTTATTATTTATGATCCTTTATCTGACCTTAAAAATTTTCATATTCATGAGTGTCCAATCTTTTGCCAATTTGGGAAA
TAAGCTCCTAGAAAATGCTACCTTCAATAATGAATCCCTTACAAAGTCAGTATGGCATTGGGATCCTGAATTTGAATCAA
TTGTCCATCCGTACTGGCGGACTTTTGATATGGTGCCAGAAGTTTATCATTATTTAGTTGGAGTGTATATTTCTATTGTT
GGAATATCGGGAGTTCTGGGAAATCTTCTTGTTCTTTACATATTTGCAAGCGCCAAAAGTTTAAGAACTCCTCCAAATAT
GTTTATAATGAGTTTAGCAATTGGAGATTTGACATTTTCTGCTGTGAATGGCTTCCCCTTACTTACTATTTCAAGTTTTA
ACACTCGATGGGCTTGGGGAAAATTAACGTGTGAGATTTATGGTTTCATCGGTGGTCTTTTTGGGTTTATATCCATCAAC
ACAATGGCACTAATTTCTCTGGATAGGTATTTTGTTATTGCCCAACCATTTCAAACAATGAAATCCCTGACAATCAAAAG
AGCAATAATCATGTTGGTTTTCGTATGGCTTTATTCATTAATTTGGTCAACACCGCCATTTTTTGGATATGGAAATTATG
TGCCGGAAGGATTTCAAACGTCTTGTACATTCGACTATTTGACCCAATCAAAAGGTAACATAATATTCAATATTGGGATG
TACATAGGAAATTTCATAATTCCCGTTGGAATAATTATATTTTGCTATTATCAAATTGTCAAAGCAGTGCGAGTACATGA
ATTAGAAATGTTAAAAATGGCTCAAAAGATGAATGCATCTCATCCAACTTCCATGAAAACGGGTGCAAAAAAGGCTGATG
TTCAAGCTGCAAAGATTTCTGTCATAATTGTCTTTTTATATATGTTATCATGGACACCATATGCAATAATTGCCCTTATG
GCTCTCACAGGGCGTAGAGATCATCTGAATCCATACACTGCAGAATTGCCGGTACTCTTTGCTAAGACCTCAGCTATGTA
CAACCCATTTATATACGCAATAAATCATCCAAAATTTCGAATTCAGCTGGAAAAGAAATTTCCATGTTTGATTTGTTGCT
GTCCACCAAAACCAAAAGAAAGGGACACTACAAGTGCAGCATCAGCAACGAAACCGAGTAAATATCAGAGTGAAAGAGAA
AGTTCAATGTCTCAACTGGATCCTGAAGACGATAAACAAGTCGTAGAAACCACCAAGAATCAAACCACAAGTGGACATAC
AAATGAAGCTTACGAGAGTGAACAGAAGTAGTTGATGAAACTAAATTATTCTATTTTTAATGACACTAGATCTTTATAAT
AATTTTATTTAAGGGAATGAGCACTGAATTTTGCGCAAAT
>SMED30018592 ID=SMED30018592|Name=ovo|organism=Schmidtea mediterranea sexual|type=transcript|length=1211bp
GTCATATTGAACACTGAGACTAGCTATCAATAGCTGACAATTAGACGTATAAAATGTTAGGGTACGCCTTTTTGGCCATT
ATTTCACACCAAAATTTCCATGAGTATTTTTCTAATAAGCACTCTACTCGCAAACGATGACGAAATGCCCACAGATTTGT
CATCGAAAACTGAAAAGATTGAAAACCATGAAAAATCTGAAAGGAATCTCTGCAAGTATTCCAGTCAGTTTCTTTCCTGT
TTTTATTCACAGGAAATGTTGACACTACTTATGAGAAAAAATTTCATCAATCAATATTCATTTTATTTAAAGATTTTCTC
GGGGTTTCCACAATTCGTCGATAACTTCAACTTAGTAAATCCAACAGATTTCACCGTCAATTCAAATTCAACAACAATTT
TGCCCTCATTCAACTTCCATAAAACGTCATTGAATATCGAAATGAACACCTCACTGGCCAATTCTTCAAGCACTGGTAGG
TCGTCTCCAACTGAAACTGTGTCTGAAAATCTTTGGTTAGAAAAAGTAAAGGTGGAAAAATATTTCCATTTAATTGAAAA
TCTATCACAATCCCAAGAGAACATTGAAGACATTGTCAAAACGATCAAAGTCAAACGAAGAAATTTTGCTGAATATATTA
AGAAACTTTACCTAAGTGATCCAGCCAAATTTAAGTTGACAAATGGTGGAGATGGAATAGTAAATCCATTTAGAAAACAA
TTCAAAGAAGAACGAGATAAATCTATGGACAAATTTTGCATCGAAGTTAATCACAATTATCAATGTAAGATATGTAACAA
GGTGTTTCCTTCCAAAAAGCACATGCAACGTCATATACGTTCACACGGTGTAAATTTTGATTGGTTGTGTAAATATTGTT
TTAAACCGTTTATTGATTCCTACGATTTAAAACGACATACGAGAGTCCATACAGGAGTTCAACCATACAAATGTCAAAGT
TGCACAAGAAAATTCAGTCAACGATGCTCATTGGAAAGTCATCAGGTGAAAATCCATGGAGTAGCACTGAATTATCTATA
CAAAGAAAGAAGGAACAAGTTGTATCCGTGTGAAATCTGCAGTTATAGTACGTCTTGTAAAGCAACTTGGTTGAGTCACA
TCATTCAGGAGCACCCGAATTCACTTTATGCAAAAGAAGAAGCACTCAAAGGAAAATACAACTGACTTTGAAAAATATTG
ATTTTTCAAGC
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in eye. Click this link to learn more about PAGE.
PAGE Curations: 75
PLANA Term Reference Transcript Description Gene Models Published Transcript Transcriptome Publication Specimen Lifecycle Evidence eye SMED30021430 SID1 transmembrane family member 1 SMESG000041575.1 Contig34061 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 
eye SMED30021430 SID1 transmembrane family member 1 SMESG000041575.1 Contig34061 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30028961 Inosine-5'-monophosphate dehydrogenase SMESG000078264.1 Contig37052 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30028961 Inosine-5'-monophosphate dehydrogenase SMESG000078264.1 Contig37052 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30025683 Transcription factor 7-like 1 SMESG000017328.1 Smed-TCF-2 smed_ncbi_20200123 PMID:28976975
Su et al., 2017 eye SMED30034479 EYE53-1 BK007033.1 smed_ncbi_20200123 PMID:18287199
Iglesias et al., 2008 eye SMED30007858 netrin receptor-like protein SMESG000042475.1 DQ086493 smed_ncbi_20200123 PMID:16033796
Cebrià et al., 2005 eye SMED30034479 EYE53-1 BK007033.1 smed_ncbi_20200123 PMID:26884331
Ong et al., 2016 eye SMED30009456 SMED30009456 SMESG000039758.1 GU295180.1 smed_ncbi_20200123 PMID:26884331
Ong et al., 2016 eye SMED30031540 Neuropeptide-3 SMESG000014460.1 BK007025.1 smed_ncbi_20200123 PMID:26884331
Ong et al., 2016 eye SMED30030594 Opsin SMESG000074489.1 AF112361 smed_ncbi_20200123 PMID:30485821
Tewari et al., 2018 
eye SMED30007326 otxA SMESG000031965.1 JN983826.1 smed_ncbi_20200123 PMID:21852957
Lapan et al., 2011 eye SMED30011934 sp6-9 SMESG000050160.1 sp6-9 smed_ncbi_20200123 PMID:21852957
Lapan et al., 2011 eye SMED30034479 EYE53-1 BK007033.1 smed_ncbi_20200123 PMID:23318635
Blassberg et al., 2013 eye SMED30034479 EYE53-1 BK007033.1 smed_ncbi_20200123 PMID:17905225
Molina et al., 2007 eye SMED30003366 distal-less SMESG000045025.1 JN983829 smed_ncbi_20200123 PMID:27034770
Currie et al., 2016 eye SMED30003366 distal-less SMESG000045025.1 SmedASXL_012281 SmedAsxl_ww_GCZZ01 PMID:27034770
Currie et al., 2016 eye SMED30003366 distal-less SMESG000045025.1 SMED30003366 smed_20140614 PMID:27034770
Currie et al., 2016 eye SMED30031425 Homeobox protein Hox-D12 SMESG000003389.1 SMED30031425 smed_20140614 PMID:27034770
Currie et al., 2016 eye SMED30014877 BMP SMESG000013937.1 EF633689.1 smed_ncbi_20200123 PMID:22451003
González-Sastre et al., 2012 eye SMED30030594 Opsin SMESG000074489.1 SmedASXL_005730 SmedAsxl_ww_GCZZ01 PMID:29158443
He et al., 2017 eye SMED30012020 tph SMESG000000522.1 SMESG000000520.1 tph smed_ncbi_20200123 PMID:25558068
Reuter et al., 2015 eye SMED30034479 EYE53-1 BK007033.1 smed_ncbi_20200123 PMID:21806978
Iglesias et al., 2011 eye SMED30012020 tph SMESG000000522.1 SMESG000000520.1 KF134114.1 smed_ncbi_20200123 PMID:24131630
März et al., 2013 eye SMED30020439 aadc SMESG000066844.1 KC568452 smed_ncbi_20200123 PMID:24131630
März et al., 2013 eye SMED30018592 ovo SMESG000081129.1 JX091074 smed_ncbi_20200123 PMID:28072387
Davies et al., 2017 
eye SMED30018592 ovo SMESG000081129.1 JX091074 smed_ncbi_20200123 PMID:28072387
Davies et al., 2017 
eye SMED30018592 ovo SMESG000081129.1 JX091074 smed_ncbi_20200123 PMID:28072387
Davies et al., 2017 
eye SMED30018592 ovo SMESG000081129.1 ovo smed_ncbi_20200123 PMID:28072387
Davies et al., 2017 eye SMED30018592 ovo SMESG000081129.1 ovo smed_ncbi_20200123 PMID:28072387
Davies et al., 2017 eye SMED30018592 ovo SMESG000081129.1 ovo smed_ncbi_20200123 PMID:28072387
Davies et al., 2017 eye SMED30018592 ovo SMESG000081129.1 SMED30018592 smed_20140614 PMID:28072387
Davies et al., 2017 eye SMED30018592 ovo SMESG000081129.1 SMED30018592 smed_20140614 PMID:28072387
Davies et al., 2017 eye SMED30018592 ovo SMESG000081129.1 SMED30018592 smed_20140614 PMID:28072387
Davies et al., 2017 eye SMED30018592 ovo SMESG000081129.1 JX091074 smed_ncbi_20200123 PMID:22884275
Lapan et al., 2012 
eye SMED30018592 ovo SMESG000081129.1 ovo smed_ncbi_20200123 PMID:25254346
Scimone et al., 2014 eye SMED30015071 Eyes absent homolog SMESG000001561.1 SMED30015071 smed_20140614 PMID:25254346
Scimone et al., 2014 eye SMED30032892 foxQ2 SMESG000062929.1 SMED30032892 smed_20140614 PMID:25254346
Scimone et al., 2014 eye SMED30025778 SOXB1-1 SMESG000011244.1 SMED30025778 smed_20140614 PMID:25254346
Scimone et al., 2014 eye SMED30011934 sp6-9 SMESG000050160.1 sp6-9 smed_ncbi_20200123 PMID:25254346
Scimone et al., 2014 eye SMED30026741 klf klf smed_ncbi_20200123 PMID:25254346
Scimone et al., 2014 eye SMED30007698 Zinc finger protein 28 SMESG000041575.1 Contig34061 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30007698 Zinc finger protein 28 SMESG000041575.1 Contig34061 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30004839 SMED30004839 SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 Contig28920 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30004839 SMED30004839 SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 Contig28920 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30002918 Innexin SMESG000000555.1 Contig34604 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30002918 Innexin SMESG000000555.1 Contig34604 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30011934 sp6-9 SMESG000050160.1 Contig37509 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30011934 sp6-9 SMESG000050160.1 Contig37509 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30008787 innexin-1 SMESG000043134.1 Contig38798 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30008787 innexin-1 SMESG000043134.1 Contig38798 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30009712 epidermal growth factor receptor 1 SMESG000070834.1 Contig29100 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30009712 epidermal growth factor receptor 1 SMESG000070834.1 Contig29100 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30013770 JmjC domain-containing protein SMESG000028946.1 Contig55456 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30013770 JmjC domain-containing protein SMESG000028946.1 Contig55456 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30012447 Filamin SMESG000064795.1 Contig18792 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30012447 Filamin SMESG000064795.1 Contig18792 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30012447 Filamin SMESG000064795.1 Contig38577 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30012447 Filamin SMESG000064795.1 Contig38577 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30011526 SMED30011526 SMESG000064795.1 Contig18792 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30011526 SMED30011526 SMESG000064795.1 Contig18792 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30011526 SMED30011526 SMESG000064795.1 Contig38577 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30011526 SMED30011526 SMESG000064795.1 Contig38577 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30032370 Beta-1,3-glucosyltransferase SMESG000009947.1 Contig40970 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30032370 Beta-1,3-glucosyltransferase SMESG000009947.1 Contig40970 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30027813 A disintegrin and metalloproteinase with thrombospondin motifs SMESG000038885.1 Contig12938 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30027813 A disintegrin and metalloproteinase with thrombospondin motifs SMESG000038885.1 Contig12938 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30024778 SMB domain-containing protein SMESG000022577.1 Contig50773 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30024778 SMB domain-containing protein SMESG000022577.1 Contig50773 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30027751 SMED30027751 SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 Contig28920 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30027751 SMED30027751 SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 Contig28920 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30029236 Uro-adherence factor A SMESG000076818.1 Contig27612 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30029236 Uro-adherence factor A SMESG000076818.1 Contig27612 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30022422 Tetratricopeptide repeat protein 39B SMESG000031495.1 Contig11545 newmark_ests PMID:27612384
Roberts-Galbraith et al., 2016 eye SMED30022422 Tetratricopeptide repeat protein 39B SMESG000031495.1 Contig11545 uc_Smed_v2 PMID:27612384
Roberts-Galbraith et al., 2016
Note: Hover over icons to view figure legend
↳contained in head region, dorsal region of the whole animal and anterior region of the whole animal
↳develops from trail cell
↳existence overlaps juvenile stage, asexual adult, adult hermaphrodite, Stage 8 and Stage 7
↳existence starts during or after Stage 7
↳part of central nervous system and visual system
→ posterior region of the eye and anterior region of the eye contained in eye
→ eye primordium develops into eye
Expand to see terms that part of eye
DEPICTED BY:
COMMENTS:
Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. The eyes are indicated by arrows. Scale bar = 250um
BROWSE PLANARIAN ONTOLOGY TREE (IN OLS):
Click on the '-' and '+' to collapse and expand term 'is a' and 'part of' relationships.
EXPLORE ONTOLOGY GRAPH:
Dynamically explore this term by selecting additional relationships to display (checkboxes on the right). Expand nodes by double-clicking on it . Single-click on a node to display the definition below the graph.
Embryonic Molecular Fate Mapping
All experimental data displayed here is from Davies et. al., 2017, Smed Embryogenesis Molecular Staging Resource
IN SITU HYBRIDIZATION DATA:
| Smed ID | Accession | Name | Alias | Expressed during stage(s) | Tissue/Pattern | Images |
|---|---|---|---|---|---|---|
| SMED30030594 | Opsin | opsin | Stage 7, Stage 8 | photoreceptor neuron, visual system, eye | | |
| SMED30018592 | AFP48372.1 | ovo | ovo | Stage 6, Stage 7, Stage 8 | trail cell, photoreceptor neuron, optic cup, pigment cup cell, visual system, eye | |
| SMED30006796 | AFC87780.1 | tyrosinase | tyrosinase | Stage 7, Stage 8 | optic cup, pigment cup cell, visual system, eye | |
Click to see image symbols and abbreviations
| Abbreviation or symbol | Definition |
|---|---|
| O | oral hemisphere |
| A | aboral hemisphere |
| D | dorsal |
| V | ventral |
| L | lateral |
| black arrowhead | embryonic pharynx |
| red arrowhead | definitive pharynx |
| black arrows | primitive gut |
| yellow arrows | primitive ectoderm cells |
| cyan arrows | brain |
| cyan arrowheads | nerve cords |
| blue arrowheads | eye progenitors (trail cells) |
| purple arrowheads | eyes |
| scale bar | 100 µm |
SEQUENCES:
smed_20140614 transcript sequences for genes validated by in situ hybridization (above).
>SMED30006796 ID=SMED30006796|Name=tyrosinase|organism=Schmidtea mediterranea sexual|type=transcript|length=1755bp
TGTCAGTTTAGTCATGCTCGTAATCACAATAGGCATAGTCTTTGCATCTTTCTTACCTTTGAGTGACTGCCTAATCCCAA
GGATTTGCAGTAGGAATGTCACTCTTTCTAATTCAACATGTTGTCCAATTTATAATGATTTTGTTTGCGGTGGTCCTTTT
CGTGGATCTTGTGAAGTCTCCATTCTTTTTCAAAATCACACTGAGCACTCGGATGTTATCACCGGAAAATTGGAAAATGA
CGACAGACTCAACTGGCCATCAAGATTTTTTAAATTTCTTTGCAGTTGCAAGTCAAACTATGATGGAATAGCCTGTGACA
AGTGTAAATCAGGGTGGCAAGGGGAAAACTGTGAGGTGGTCTCCCCGAGAAAGATTAGACAAAATATTCTTAACATGAGA
TCATACGATGTTTTTATTTTTTTATCGATACTGAACATCAGCAAATATCAGTTGGCCGATTTCCTGATCACAAATTCGTC
CTCAAACCTTCACTGTGACCCTGTCAATGAAGACAACATTCAATTGGTCAATGCTTCCATTTATGATACAATGGTTTACT
TACATTTCTATGCGTCCAGGAGTACAATGTCTAAAGAACTTATGGAATCCTGCACAGACAAGGATAACAAATTAGACTTC
GCTCATAAAGGTCCAGCTTTTTTTACATGGCACCGACATTATTTACTGATGTTTGAAGACTTATTAAGGAGTATTGCAGT
CGAACAATTTGGATATTATAATTTCACATTACCATATTGGGACTGGACGAATCAAATAACTTGTAATATATGTACAAATG
ACTTACTTGGCGATATTCCCACTGAAGATCAAGAATCTAACAGCACATTTTTTAAATGGAAACCGATTTGCCCTCAGAAA
CCTAACGATTTTGATTGTCATATTTGCGATCCAAGCCAGGAAGAACCTTTTTTATGGAGAAAATACTCATCAACGGTAGA
CAGACTTCCTAATCAGAACGAAATTGATGAGTTATTCTCAATCAACCAATATGATTCGGAGCCCTTCAATTCCAGCTCAT
TTAGTAGGAAAAGCTTTCGGAATTTTGCAGAGGGATATTATCGAGTTCATCCAAACTCAGATGATATGAAAATGAAAGAC
ATTGGGAAGGGACTCCCCCATCAAAATATCATGATGCATAATATGTTTTATCAATGGAACTTGGATGGATTTCACAACGA
GTCCCAATGATCCATTATTTCTACTACATCATACGTTTATGGACAAAATCTTTGAAATTTGGCTATTAAGAAATAGACGA
TCTACATACCCTGGGAAATCTTCAACACCAATCGGGCAGCATGCTGACGATTTTATTGTGCCTTTCCTTCCACTAATCAG
AAACAGGAATTTGTTTACTTCAGCAAATGAATTTGGCTACGCCTACGATAACAATATTGTTGGAAATAAATTGTTCACAA
ATCATCAACTAGATTTCGAAAAGAGCTCATCGGAAATTTACTACATCCTAACGGCAGTTGCCTTTGTAGTACTAGTTGCG
ATCGTCGTCGGATTGTACTGCTTCAGACCCAGTCAAATCAGTCACACGGCTTATGAATTCATTGAAGACCAGGAGCAGGA
GGAAAAGACAAATTACTTTAACAACAATGAAAAAATGCCTCTACTGAAATGACAAGCCATTTCTGATGACTATTATAATA
TTGTCACCTTAAATTTTCTTTGAAACAACTTTATTATTGACAAATTTTGAAGAATCCTTTTAAGCAAAATAAAGT
>SMED30030594 ID=SMED30030594|Name=Opsin|organism=Schmidtea mediterranea sexual|type=transcript|length=1880bp
AATAAAATGAAATTTATAATGCCATTGGTATTTACACTGTGGTTAATAACGATAATAATCAGAATTTTTAATGATAAATA
TAGTAAACGATAACTAGTAACGGTAACCCTAATAATGAATGCTATATTACATATAGTAGTGTTACCAAAATTTTGGAATT
TAAAATAATAAGTTTATTATGAGTGACCATGATAATAAAAAAGATTTTTAAATAAAATGATAATATTACTATATAGTCGG
TTATAGTTCCGATTAGTCTACTATCGTAGACGTAATAAAAAGAGTTTAGTAACCTAATTTTCAATGTTTTTTGAAAGTTG
CTCGTCTCTATGGCAACTTATTATCGTAAGGAAAATTTTCTACTTCACTATGATATTTTCGGAGTGAATTTATTGATTTA
CATTCAAGGACTTTCACTATTGCATTTACTGAAGCGATCGTTTCATTTGGAACTCATATTTTCGCCCCTAATCGTTCTGG
AATTTATTATTTATGATCCTTTATCTGACCTTAAAAATTTTCATATTCATGAGTGTCCAATCTTTTGCCAATTTGGGAAA
TAAGCTCCTAGAAAATGCTACCTTCAATAATGAATCCCTTACAAAGTCAGTATGGCATTGGGATCCTGAATTTGAATCAA
TTGTCCATCCGTACTGGCGGACTTTTGATATGGTGCCAGAAGTTTATCATTATTTAGTTGGAGTGTATATTTCTATTGTT
GGAATATCGGGAGTTCTGGGAAATCTTCTTGTTCTTTACATATTTGCAAGCGCCAAAAGTTTAAGAACTCCTCCAAATAT
GTTTATAATGAGTTTAGCAATTGGAGATTTGACATTTTCTGCTGTGAATGGCTTCCCCTTACTTACTATTTCAAGTTTTA
ACACTCGATGGGCTTGGGGAAAATTAACGTGTGAGATTTATGGTTTCATCGGTGGTCTTTTTGGGTTTATATCCATCAAC
ACAATGGCACTAATTTCTCTGGATAGGTATTTTGTTATTGCCCAACCATTTCAAACAATGAAATCCCTGACAATCAAAAG
AGCAATAATCATGTTGGTTTTCGTATGGCTTTATTCATTAATTTGGTCAACACCGCCATTTTTTGGATATGGAAATTATG
TGCCGGAAGGATTTCAAACGTCTTGTACATTCGACTATTTGACCCAATCAAAAGGTAACATAATATTCAATATTGGGATG
TACATAGGAAATTTCATAATTCCCGTTGGAATAATTATATTTTGCTATTATCAAATTGTCAAAGCAGTGCGAGTACATGA
ATTAGAAATGTTAAAAATGGCTCAAAAGATGAATGCATCTCATCCAACTTCCATGAAAACGGGTGCAAAAAAGGCTGATG
TTCAAGCTGCAAAGATTTCTGTCATAATTGTCTTTTTATATATGTTATCATGGACACCATATGCAATAATTGCCCTTATG
GCTCTCACAGGGCGTAGAGATCATCTGAATCCATACACTGCAGAATTGCCGGTACTCTTTGCTAAGACCTCAGCTATGTA
CAACCCATTTATATACGCAATAAATCATCCAAAATTTCGAATTCAGCTGGAAAAGAAATTTCCATGTTTGATTTGTTGCT
GTCCACCAAAACCAAAAGAAAGGGACACTACAAGTGCAGCATCAGCAACGAAACCGAGTAAATATCAGAGTGAAAGAGAA
AGTTCAATGTCTCAACTGGATCCTGAAGACGATAAACAAGTCGTAGAAACCACCAAGAATCAAACCACAAGTGGACATAC
AAATGAAGCTTACGAGAGTGAACAGAAGTAGTTGATGAAACTAAATTATTCTATTTTTAATGACACTAGATCTTTATAAT
AATTTTATTTAAGGGAATGAGCACTGAATTTTGCGCAAAT
>SMED30018592 ID=SMED30018592|Name=ovo|organism=Schmidtea mediterranea sexual|type=transcript|length=1211bp
GTCATATTGAACACTGAGACTAGCTATCAATAGCTGACAATTAGACGTATAAAATGTTAGGGTACGCCTTTTTGGCCATT
ATTTCACACCAAAATTTCCATGAGTATTTTTCTAATAAGCACTCTACTCGCAAACGATGACGAAATGCCCACAGATTTGT
CATCGAAAACTGAAAAGATTGAAAACCATGAAAAATCTGAAAGGAATCTCTGCAAGTATTCCAGTCAGTTTCTTTCCTGT
TTTTATTCACAGGAAATGTTGACACTACTTATGAGAAAAAATTTCATCAATCAATATTCATTTTATTTAAAGATTTTCTC
GGGGTTTCCACAATTCGTCGATAACTTCAACTTAGTAAATCCAACAGATTTCACCGTCAATTCAAATTCAACAACAATTT
TGCCCTCATTCAACTTCCATAAAACGTCATTGAATATCGAAATGAACACCTCACTGGCCAATTCTTCAAGCACTGGTAGG
TCGTCTCCAACTGAAACTGTGTCTGAAAATCTTTGGTTAGAAAAAGTAAAGGTGGAAAAATATTTCCATTTAATTGAAAA
TCTATCACAATCCCAAGAGAACATTGAAGACATTGTCAAAACGATCAAAGTCAAACGAAGAAATTTTGCTGAATATATTA
AGAAACTTTACCTAAGTGATCCAGCCAAATTTAAGTTGACAAATGGTGGAGATGGAATAGTAAATCCATTTAGAAAACAA
TTCAAAGAAGAACGAGATAAATCTATGGACAAATTTTGCATCGAAGTTAATCACAATTATCAATGTAAGATATGTAACAA
GGTGTTTCCTTCCAAAAAGCACATGCAACGTCATATACGTTCACACGGTGTAAATTTTGATTGGTTGTGTAAATATTGTT
TTAAACCGTTTATTGATTCCTACGATTTAAAACGACATACGAGAGTCCATACAGGAGTTCAACCATACAAATGTCAAAGT
TGCACAAGAAAATTCAGTCAACGATGCTCATTGGAAAGTCATCAGGTGAAAATCCATGGAGTAGCACTGAATTATCTATA
CAAAGAAAGAAGGAACAAGTTGTATCCGTGTGAAATCTGCAGTTATAGTACGTCTTGTAAAGCAACTTGGTTGAGTCACA
TCATTCAGGAGCACCCGAATTCACTTTATGCAAAAGAAGAAGCACTCAAAGGAAAATACAACTGACTTTGAAAAATATTG
ATTTTTCAAGC
PAGE: Planarian Anatomy Gene Expression
These transcripts were reported as being expressed in eye. Click this link to learn more about PAGE.
PAGE Curations: 75
| PLANA Term | Reference Transcript | Description | Gene Models | Published Transcript | Transcriptome | Publication | Specimen | Lifecycle | Evidence |
|---|---|---|---|---|---|---|---|---|---|
| eye | SMED30021430 | SID1 transmembrane family member 1 | SMESG000041575.1 | Contig34061 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30021430 | SID1 transmembrane family member 1 | SMESG000041575.1 | Contig34061 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30028961 | Inosine-5'-monophosphate dehydrogenase | SMESG000078264.1 | Contig37052 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30028961 | Inosine-5'-monophosphate dehydrogenase | SMESG000078264.1 | Contig37052 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30025683 | Transcription factor 7-like 1 | SMESG000017328.1 | Smed-TCF-2 | smed_ncbi_20200123 | PMID:28976975 Su et al., 2017 | | | |
| eye | SMED30034479 | EYE53-1 | BK007033.1 | smed_ncbi_20200123 | PMID:18287199 Iglesias et al., 2008 | | | | |
| eye | SMED30007858 | netrin receptor-like protein | SMESG000042475.1 | DQ086493 | smed_ncbi_20200123 | PMID:16033796 Cebrià et al., 2005 | | | |
| eye | SMED30034479 | EYE53-1 | BK007033.1 | smed_ncbi_20200123 | PMID:26884331 Ong et al., 2016 | | | | |
| eye | SMED30009456 | SMED30009456 | SMESG000039758.1 | GU295180.1 | smed_ncbi_20200123 | PMID:26884331 Ong et al., 2016 | | | |
| eye | SMED30031540 | Neuropeptide-3 | SMESG000014460.1 | BK007025.1 | smed_ncbi_20200123 | PMID:26884331 Ong et al., 2016 | | | |
| eye | SMED30030594 | Opsin | SMESG000074489.1 | AF112361 | smed_ncbi_20200123 | PMID:30485821 Tewari et al., 2018 | | | |
| eye | SMED30007326 | otxA | SMESG000031965.1 | JN983826.1 | smed_ncbi_20200123 | PMID:21852957 Lapan et al., 2011 | | | |
| eye | SMED30011934 | sp6-9 | SMESG000050160.1 | sp6-9 | smed_ncbi_20200123 | PMID:21852957 Lapan et al., 2011 | | | |
| eye | SMED30034479 | EYE53-1 | BK007033.1 | smed_ncbi_20200123 | PMID:23318635 Blassberg et al., 2013 | | | | |
| eye | SMED30034479 | EYE53-1 | BK007033.1 | smed_ncbi_20200123 | PMID:17905225 Molina et al., 2007 | | | | |
| eye | SMED30003366 | distal-less | SMESG000045025.1 | JN983829 | smed_ncbi_20200123 | PMID:27034770 Currie et al., 2016 | | | |
| eye | SMED30003366 | distal-less | SMESG000045025.1 | SmedASXL_012281 | SmedAsxl_ww_GCZZ01 | PMID:27034770 Currie et al., 2016 | | | |
| eye | SMED30003366 | distal-less | SMESG000045025.1 | SMED30003366 | smed_20140614 | PMID:27034770 Currie et al., 2016 | | | |
| eye | SMED30031425 | Homeobox protein Hox-D12 | SMESG000003389.1 | SMED30031425 | smed_20140614 | PMID:27034770 Currie et al., 2016 | | | |
| eye | SMED30014877 | BMP | SMESG000013937.1 | EF633689.1 | smed_ncbi_20200123 | PMID:22451003 González-Sastre et al., 2012 | | | |
| eye | SMED30030594 | Opsin | SMESG000074489.1 | SmedASXL_005730 | SmedAsxl_ww_GCZZ01 | PMID:29158443 He et al., 2017 | | | |
| eye | SMED30012020 | tph | SMESG000000522.1 SMESG000000520.1 | tph | smed_ncbi_20200123 | PMID:25558068 Reuter et al., 2015 | | | |
| eye | SMED30034479 | EYE53-1 | BK007033.1 | smed_ncbi_20200123 | PMID:21806978 Iglesias et al., 2011 | | | | |
| eye | SMED30012020 | tph | SMESG000000522.1 SMESG000000520.1 | KF134114.1 | smed_ncbi_20200123 | PMID:24131630 März et al., 2013 | | | |
| eye | SMED30020439 | aadc | SMESG000066844.1 | KC568452 | smed_ncbi_20200123 | PMID:24131630 März et al., 2013 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | JX091074 | smed_ncbi_20200123 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | JX091074 | smed_ncbi_20200123 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | JX091074 | smed_ncbi_20200123 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | ovo | smed_ncbi_20200123 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | ovo | smed_ncbi_20200123 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | ovo | smed_ncbi_20200123 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | SMED30018592 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | SMED30018592 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | SMED30018592 | smed_20140614 | PMID:28072387 Davies et al., 2017 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | JX091074 | smed_ncbi_20200123 | PMID:22884275 Lapan et al., 2012 | | | |
| eye | SMED30018592 | ovo | SMESG000081129.1 | ovo | smed_ncbi_20200123 | PMID:25254346 Scimone et al., 2014 | | | |
| eye | SMED30015071 | Eyes absent homolog | SMESG000001561.1 | SMED30015071 | smed_20140614 | PMID:25254346 Scimone et al., 2014 | | | |
| eye | SMED30032892 | foxQ2 | SMESG000062929.1 | SMED30032892 | smed_20140614 | PMID:25254346 Scimone et al., 2014 | | | |
| eye | SMED30025778 | SOXB1-1 | SMESG000011244.1 | SMED30025778 | smed_20140614 | PMID:25254346 Scimone et al., 2014 | | | |
| eye | SMED30011934 | sp6-9 | SMESG000050160.1 | sp6-9 | smed_ncbi_20200123 | PMID:25254346 Scimone et al., 2014 | | | |
| eye | SMED30026741 | klf | klf | smed_ncbi_20200123 | PMID:25254346 Scimone et al., 2014 | | | | |
| eye | SMED30007698 | Zinc finger protein 28 | SMESG000041575.1 | Contig34061 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30007698 | Zinc finger protein 28 | SMESG000041575.1 | Contig34061 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30004839 | SMED30004839 | SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 | Contig28920 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30004839 | SMED30004839 | SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 | Contig28920 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30002918 | Innexin | SMESG000000555.1 | Contig34604 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30002918 | Innexin | SMESG000000555.1 | Contig34604 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30011934 | sp6-9 | SMESG000050160.1 | Contig37509 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30011934 | sp6-9 | SMESG000050160.1 | Contig37509 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30008787 | innexin-1 | SMESG000043134.1 | Contig38798 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30008787 | innexin-1 | SMESG000043134.1 | Contig38798 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30009712 | epidermal growth factor receptor 1 | SMESG000070834.1 | Contig29100 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30009712 | epidermal growth factor receptor 1 | SMESG000070834.1 | Contig29100 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30013770 | JmjC domain-containing protein | SMESG000028946.1 | Contig55456 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30013770 | JmjC domain-containing protein | SMESG000028946.1 | Contig55456 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30012447 | Filamin | SMESG000064795.1 | Contig18792 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30012447 | Filamin | SMESG000064795.1 | Contig18792 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30012447 | Filamin | SMESG000064795.1 | Contig38577 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30012447 | Filamin | SMESG000064795.1 | Contig38577 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30011526 | SMED30011526 | SMESG000064795.1 | Contig18792 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30011526 | SMED30011526 | SMESG000064795.1 | Contig18792 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30011526 | SMED30011526 | SMESG000064795.1 | Contig38577 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30011526 | SMED30011526 | SMESG000064795.1 | Contig38577 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30032370 | Beta-1,3-glucosyltransferase | SMESG000009947.1 | Contig40970 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30032370 | Beta-1,3-glucosyltransferase | SMESG000009947.1 | Contig40970 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30027813 | A disintegrin and metalloproteinase with thrombospondin motifs | SMESG000038885.1 | Contig12938 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30027813 | A disintegrin and metalloproteinase with thrombospondin motifs | SMESG000038885.1 | Contig12938 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30024778 | SMB domain-containing protein | SMESG000022577.1 | Contig50773 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30024778 | SMB domain-containing protein | SMESG000022577.1 | Contig50773 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30027751 | SMED30027751 | SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 | Contig28920 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30027751 | SMED30027751 | SMESG000054763.1 SMESG000054762.1 SMESG000037691.1 SMESG000037688.1 | Contig28920 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30029236 | Uro-adherence factor A | SMESG000076818.1 | Contig27612 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30029236 | Uro-adherence factor A | SMESG000076818.1 | Contig27612 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30022422 | Tetratricopeptide repeat protein 39B | SMESG000031495.1 | Contig11545 | newmark_ests | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
| eye | SMED30022422 | Tetratricopeptide repeat protein 39B | SMESG000031495.1 | Contig11545 | uc_Smed_v2 | PMID:27612384 Roberts-Galbraith et al., 2016 | | | |
