UPF0602 protein C4orf47 homolog
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035930 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Human
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]) HSP 1 Score: 134.035 bits (336), Expect = 9.568e-36 Identity = 104/308 (33.77%), Postives = 148/308 (48.05%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLN 995 KTDMER+GLF EM Y T+ D Y +PF + K K L ++ + GYF F R+FEGE NL +RRR + +KN+GK F+ SN KK G GS G + +P+FS ++ KN TNPGKKG+GYGYA++ + +D YD A+ Y K+ E R L F YF +NPY E + P +++ K +P PG P GG K G PY P+ D + L ++ +K+++ G KS +S++ NV +N+ N Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSQFNRPF----NEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKY--KKANEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKP---GGMKAGTFDPY----PSHSADPYVAKLA-NISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKN 300
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Human
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]) HSP 1 Score: 111.694 bits (278), Expect = 9.898e-29 Identity = 69/175 (39.43%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMY 602 KTDMER+GLF EM Y T+ D Y +PF + K K L ++ + GYF F R+FEGE NL +RRR + +KN+GK F+ SN KK G GS G + +P+FS ++ KN TNPGKKG+GYGYA++ + +D YD A+ Y Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSQFNRPF----NEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKY 177
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Human
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]) HSP 1 Score: 104.375 bits (259), Expect = 3.033e-26 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCL 548 KTDMER+GLF EM Y T+ D Y +PF + K K L ++ + GYF F R+FEGE NL +RRR + +KN+GK F+ SN KK G GS G + +P+FS ++ KN TNPGKKG+GYGYA++ + Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSQFNRPF----NEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITI 159
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Zebrafish
Match: zgc:153146 (zgc:153146 [Source:NCBI gene;Acc:751702]) HSP 1 Score: 156.762 bits (395), Expect = 1.557e-44 Identity = 117/317 (36.91%), Postives = 159/317 (50.16%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQD-IIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGP---YEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 K+DMER+G+FKEMGY +I D Y F Y D K K L T+SK GYF F R+FE E+ T+ + + R++R +KN+GK F+ SN K G G+ G I S + + KNF TNP KKGSGYGY D+ L+ + SD YD A+ M ++E+ H K L F YF NPY + + P EEK V PF P S K GG K G YP Y K T+++V NN K+++ +PG KS +S++ NVN VN+ N + I +VM++ Sbjct: 6 KSDMERIGVFKEMGYISIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIPRKQNKSAGKNFYTNPPKKGSGYGYPDITLSKMVSYSSDPYDRAKEM-LKREITAH-KSMLKGGAFRLNLHPNEYFDGNPYKFDKPLPPPKKIEEKKHFAV------PFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKTKSVVA---NNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Zebrafish
Match: C14H4orf47 (zgc:153146 [Source:NCBI gene;Acc:751702]) HSP 1 Score: 154.836 bits (390), Expect = 8.577e-44 Identity = 116/317 (36.59%), Postives = 158/317 (49.84%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQD-IIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGP---YEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 K+DMER+G+FKEMGY +I D Y F Y D K K L T+SK GYF F R+FE E+ T+ + + R++R +KN+GK F+ SN K G G+ G I S + + KNF TNP KKGSGYGY D+ L+ + SD YD A+ M ++E+ H K L F YF NPY + + P EEK V PF P S K GG K G YP Y K +++V NN K+++ +PG KS +S++ NVN VN+ N + I +VM++ Sbjct: 6 KSDMERIGVFKEMGYTSIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIPRKQNKSAGKNFYTNPPKKGSGYGYPDITLSKMVSYSSDPYDRAKEM-LKREITAH-KSMLKGGAFRLNLHPNEYFDGNPYKFDKPLPPPKKIEEKKHFAV------PFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKNKSVVA---NNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Zebrafish
Match: C14H4orf47 (zgc:153146 [Source:NCBI gene;Acc:751702]) HSP 1 Score: 154.836 bits (390), Expect = 8.577e-44 Identity = 116/317 (36.59%), Postives = 158/317 (49.84%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQD-IIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGP---YEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 K+DMER+G+FKEMGY +I D Y F Y D K K L T+SK GYF F R+FE E+ T+ + + R++R +KN+GK F+ SN K G G+ G I S + + KNF TNP KKGSGYGY D+ L+ + SD YD A+ M ++E+ H K L F YF NPY + + P EEK V PF P S K GG K G YP Y K +++V NN K+++ +PG KS +S++ NVN VN+ N + I +VM++ Sbjct: 6 KSDMERIGVFKEMGYTSIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIPRKQNKSAGKNFYTNPPKKGSGYGYPDITLSKMVSYSSDPYDRAKEM-LKREITAH-KSMLKGGAFRLNLHPNEYFDGNPYKFDKPLPPPKKIEEKKHFAV------PFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKNKSVVA---NNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Xenopus
Match: C4orf47 (chromosome 4 open reading frame 47 [Source:NCBI gene;Acc:100379819]) HSP 1 Score: 126.716 bits (317), Expect = 3.958e-33 Identity = 105/318 (33.02%), Postives = 154/318 (48.43%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 +TDMER+GLF EMGY +I D Y KPF + K + L ++S A GYF F RVFEGES ++++ RR++R Q +KN+GK F+ S+ KK SG GS G + + FS + + KNF TNP K+GSGYGY V + + S+ YD A + +KE+ H+ + L F +F NPY + + P + K ++PF P S K GG K G YP Y K + + + K+++ G K+ S+L NV V +N ++ N+ +Y Sbjct: 5 RTDMERIGLFSEMGYTSIGDKYAPPGSKPF----NESASKNRQILPGGSKSMANILGGYFDAQFKRVFEGESYSDVLKQRRQYRMQQSKKNLGKPFLPSSGEKKPSGLGSFYGTVGGPVVAFSAELKPRKAYTAPGKNFYTNPPKQGSGYGYTSVTIGKPYLYSSENYDIATEL-IKKEIENHKSK-LKGGPFKLNLHPKDHFNPNPYYTDKPLPPLKVHSQKKET---EKPFKPSSPGKQAGGMKAGTFDTYPTHSNDPYTIKSAKTPIKE-----RKIFHPPGGPKTYPVHSILTSNVIKSVTAVNYKTV-NLTSY 307
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Mouse
Match: 1700029J07Rik (RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729]) HSP 1 Score: 159.844 bits (403), Expect = 1.564e-45 Identity = 111/304 (36.51%), Postives = 153/304 (50.33%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLN 995 KTDMER+GLF EM Y T+ D Y PF + K + L T+ ++ GYF F+R+FEGE NL +RRR+ +KN+GK FI S+ KK SG GS G + +P+FS + P KN TNPGKKG+GYGYA+V + SD+YD AR Y +KE EH R + F YF +NPY E + P + K V++ +PF P S K GG K G PY PA D + + + + ++++ G KS +S++ NV +N N Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKPSGLGSYYGTIGGPVPFFSAQIKPKDKYQPPGKNLYTNPGKKGTGYGYANVTIGKQLSHSSDLYDAARQSY-KKESEEHH-RLIKGSPFKLHLHPKDYFDTNPYFLEHHLPPLRREEKKEVSF---KPFKPSSPGKKAGGMKAGAFDPY----PAHSADPYVVKVEKAIPSKGERVFHPPNGPKSRPVESIMALNVKRALNVKN 301
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Mouse
Match: 1700029J07Rik (RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729]) HSP 1 Score: 159.844 bits (403), Expect = 1.564e-45 Identity = 111/304 (36.51%), Postives = 153/304 (50.33%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLN 995 KTDMER+GLF EM Y T+ D Y PF + K + L T+ ++ GYF F+R+FEGE NL +RRR+ +KN+GK FI S+ KK SG GS G + +P+FS + P KN TNPGKKG+GYGYA+V + SD+YD AR Y +KE EH R + F YF +NPY E + P + K V++ +PF P S K GG K G PY PA D + + + + ++++ G KS +S++ NV +N N Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKPSGLGSYYGTIGGPVPFFSAQIKPKDKYQPPGKNLYTNPGKKGTGYGYANVTIGKQLSHSSDLYDAARQSY-KKESEEHH-RLIKGSPFKLHLHPKDYFDTNPYFLEHHLPPLRREEKKEVSF---KPFKPSSPGKKAGGMKAGAFDPY----PAHSADPYVVKVEKAIPSKGERVFHPPNGPKSRPVESIMALNVKRALNVKN 301
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Mouse
Match: 1700029J07Rik (RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729]) HSP 1 Score: 75.0998 bits (183), Expect = 3.333e-16 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKK 389 KTDMER+GLF EM Y T+ D Y PF + K + L T+ ++ GYF F+R+FEGE NL +RRR+ +KN+GK FI S+ KK Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKK 106
BLAST of UPF0602 protein C4orf47 homolog vs. UniProt/SwissProt
Match: sp|Q3U1D9|CD047_MOUSE (UPF0602 protein C4orf47 homolog OS=Mus musculus OX=10090 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.094e-44 Identity = 111/304 (36.51%), Postives = 153/304 (50.33%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLN 995 KTDMER+GLF EM Y T+ D Y PF + K + L T+ ++ GYF F+R+FEGE NL +RRR+ +KN+GK FI S+ KK SG GS G + +P+FS + P KN TNPGKKG+GYGYA+V + SD+YD AR Y +KE EH R + F YF +NPY E + P + K V++ +PF P S K GG K G PY PA D + + + + ++++ G KS +S++ NV +N N Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSPFNRPFNEAASKNRQILPGGTKEMSSLQAGYFDSQFARIFEGEGYVNLNQVRRRYMLAESKKNLGKAFIPSSGEKKPSGLGSYYGTIGGPVPFFSAQIKPKDKYQPPGKNLYTNPGKKGTGYGYANVTIGKQLSHSSDLYDAARQSY-KKESEEHH-RLIKGSPFKLHLHPKDYFDTNPYFLEHHLPPLRREEKKEVSF---KPFKPSSPGKKAGGMKAGAFDPY----PAHSADPYVVKVEKAIPSKGERVFHPPNGPKSRPVESIMALNVKRALNVKN 301
BLAST of UPF0602 protein C4orf47 homolog vs. UniProt/SwissProt
Match: sp|Q0P4C5|CD047_DANRE (UPF0602 protein C4orf47 homolog OS=Danio rerio OX=7955 GN=zgc:153146 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.979e-42 Identity = 115/317 (36.28%), Postives = 158/317 (49.84%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQD-IIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGP---YEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 K+DMER+G+FKEMGY +I D Y F Y D K K L T+SK GYF F R+FE E+ T+ + + R++R +KN+GK F+ SN K G G+ G I S + + KNF TNP K+GSGYG D+ L+ + SD YD A+ M ++E+ H K L F YF NPY + + P EEK V PF P S K GG K G YP Y K T+++V NN K+++ +PG KS +S++ NVN VN+ N + I +VM++ Sbjct: 6 KSDMERIGVFKEMGYISIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIPRKQNKSAGKNFYTNPPKEGSGYGCPDITLSKMVSYSSDPYDRAKEM-LKREITAH-KSMLKGGAFRLNLHPNEYFDGNPYKFDKPLPPPKKIEEKKHFAV------PFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKTKSVVA---NNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF 311
BLAST of UPF0602 protein C4orf47 homolog vs. UniProt/SwissProt
Match: sp|Q5XHC1|CD047_XENLA (UPF0602 protein C4orf47 homolog OS=Xenopus laevis OX=8355 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.737e-37 Identity = 115/319 (36.05%), Postives = 158/319 (49.53%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCL-NPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 KTDMER+GLF EMGY +I D Y KPF + K + L ++S A GYF F RVFEGES ++ RR+ R Q +KN+GK F+ S+ KK+SG GS G + + FS ++ + KNF TNP K GSGYGY V + PYP + S+ YD +R + +KE+ EH K L F YF NPY + + P + K ++PF P S K GG K G PYP Y K ++ V + K+++ G K+ S+L NV V LN ++ N+ +Y Sbjct: 5 KTDMERIGLFSEMGYTSIGDKYAAPGSKPF----NESASKNRQMLPGGSKSMANMLGGYFDGQFKRVFEGESYSDPFKQRRQHRMQQSKKNLGKPFLPSSGEKKRSGLGSFYGTLGGPVVAFSAELKSRKAYTAPGKNFYTNPPKDGSGYGYPSVTIGKPYP-YSSENYDISREL-IKKEI-EHHKSKLKGGAFKLNLHPKDYFEPNPYYTDKTLPPLKVHSQKKET---EKPFKPSSPAKEAGGMKAGTFDPYPTHSNDPYTAKPSKTPVKE-----RKVFHPPGGPKTYPVHSILTSNVIKSVTALNYKTV-NLASY 307
BLAST of UPF0602 protein C4orf47 homolog vs. UniProt/SwissProt
Match: sp|Q2T9M0|CD047_BOVIN (UPF0602 protein C4orf47 homolog OS=Bos taurus OX=9913 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 3.681e-37 Identity = 108/321 (33.64%), Postives = 157/321 (48.91%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKR-----PFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 KTDMER+GLF EM Y T+ D Y +PF + K + L ++ + GYF F R+FEGES N +RRR+ + +KN+ K F+ SN KK G GS G + +P+FS ++ P KN TNPGKKG+GYGYA++ + SD+YD A+ + +KE EH +R L F YF +NPY EK + ++K+ PF P S K GG K G PY P+ D + L + + K+++ G KS +S++ NV R N+ ++ +V +Y Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSQFNRPF----NESASKNRQILPGGSKEMSNLQAGYFDPHFVRIFEGESYVNPNQVRRRYMMEEAKKNLSKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPKEKYEPPGKNLYTNPGKKGTGYGYANITIGKQFSHSSDLYDAAK-LNNKKENEEH-RRLLKGTAFKLNLYTREYFDTNPY------MSEKPLPPIKKVEKKETVGNPFKPSSPGKKAGGMKAGTFDPY----PSHSADPYVVKL-KSPSSKSAKVFHPPGGPKSRPIESIMALNVK-RALNMKNYKTASVQSY 309
BLAST of UPF0602 protein C4orf47 homolog vs. UniProt/SwissProt
Match: sp|A7E2U8|CD047_HUMAN (UPF0602 protein C4orf47 OS=Homo sapiens OX=9606 GN=C4orf47 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.595e-35 Identity = 104/308 (33.77%), Postives = 148/308 (48.05%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPY-----KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLN 995 KTDMER+GLF EM Y T+ D Y +PF + K K L ++ + GYF F R+FEGE NL +RRR + +KN+GK F+ SN KK G GS G + +P+FS ++ KN TNPGKKG+GYGYA++ + +D YD A+ Y K+ E R L F YF +NPY E + P +++ K +P PG P GG K G PY P+ D + L ++ +K+++ G KS +S++ NV +N+ N Sbjct: 7 KTDMERIGLFSEMEYITVGDKYVSQFNRPF----NEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKY--KKANEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKP---GGMKAGTFDPY----PSHSADPYVAKLA-NISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKN 300
BLAST of UPF0602 protein C4orf47 homolog vs. TrEMBL
Match: A0A183TR35 (Uncharacterized protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS18933 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.211e-47 Identity = 115/330 (34.85%), Postives = 168/330 (50.91%), Query Frame = 3 Query: 99 DMERVGLFKEMGYHTINDPY------KPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYD-GARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYS------NPYEGGMGPYEEKHGKTV--NYLQKRP-FIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTN--KLYNHTPGSKSCI---FQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 D +R+G+FKE+GY TINDPY K F + ++ G +++KA T DGYF PF+RVFEGE+ +N++ +RR WR +N K + ++ S+P KK+ G GS GC P S + V K P NF TNPGKKG+GYGY DV +NPYPEW + G+++ K EH++ L R F+ G F NP G GP K G + L P F+P S K GG KDGCL+ +P Y D++ R ++ ++ + +L P + + SV+ +N++ +N +VM + Sbjct: 10 DFKRMGIFKELGYTTINDPYTVVRPDKLFRNLQNEPGMRPMILAGGFSKTKADTVDGYFA-PFARVFEGEASSNIIQLRRAWRKENNAKKLAGDWVYSSPAKKRQGVGSPFGCFQEQYPAMSREAKRVE-KEPELHNFYTNPGKKGTGYGYLDVTINPYPEWMAGATTLGSQHEVIMKANEEHKQLCLGRPVFVSQQHSGEAFDPEIINGVNPLAPG-GPVTHKFGNSAADKSLNIGPTFLPSSPAKWDGGCKDGCLSKFPTYIGDPYIDQY-RLMIQKIKKSPEDAQLRPWVPQPPTAVEIPTPSVVNRNIDLAINAKTRKKRLHVMPF 335
BLAST of UPF0602 protein C4orf47 homolog vs. TrEMBL
Match: A0A267FK75 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig016035g1 PE=4 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 9.926e-46 Identity = 108/316 (34.18%), Postives = 171/316 (54.11%), Query Frame = 3 Query: 84 MTEKTDMERVGLFKEMGYHTINDPYK-PFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMG-PYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 M K+DM+R+G+FKEM YHT+ DPYK P + KG+ L T+ K+ GY ++ F RVFEGE ++ + RR+ R + +N+ +++ ++ K SGTGS G + YF+ + + P KN +TNP KKG+GYGYA V LN YP++KSD Y+ +++ ++E +H+++ + F + +F +NPY+GG E + + RPF P + K GG K G +P +Y+ K V V N++ K + G K+ + SVL +NV VN+ N S+++VM+Y Sbjct: 1 MGTKSDMDRIGIFKEMSYHTVGDPYKNPGNFQFNTSAYKGRQMLPGGTKKKSGLSQGYMSE-FGRVFEGEGYSDPIKTRRQERQKASSRNLSRSWNPTSFPKVGSGTGSHYGTFSGPVQYFNAFSSSKGKAAPEGKNILTNPPKKGTGYGYAFVTLNKYPDYKSDTYEKYKDIQ-KRENEQHKQKVAGKGAFKLSTHPADFFDANPYKGGSALTKSEAKAEPI----ARPFKPSNPGKKDGGMKAGTFDSFPTYSSEKYQKKSLTRPVQ-VVNSSGKTFVPNSGPKTTLQTSVLHQNVTRSVNSSNYKSVQSVMSY 309
BLAST of UPF0602 protein C4orf47 homolog vs. TrEMBL
Match: A0A2C9K232 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106078477 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.998e-44 Identity = 117/308 (37.99%), Postives = 159/308 (51.62%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYK-PFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGM-GPYEEK-HGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSI 1007 K+DMERVGLFKEM Y T+ DPYK P + KGK + T+ K+A DGYF F RVFEGES ++ + +RR+ R +KN+ K F+ +N + +G G+ G + ++P S T K KN +TNPGKKG+GYGYA++CLNPYP D Y+ +MY ++E+ +H K L F YF NPY + P K G PF P + K L G K G PYP Y K+ R + +V N K + PG KS S++ +N+ VN+ N SI Sbjct: 7 KSDMERVGLFKEMDYVTVGDPYKTPGQGVFNEPAGKGKQMIPGGTKEKSAKSDGYFAD-FGRVFEGESYSDPVKLRRQHRMSESKKNLSKAFVPTNGYRTMNGLGTFYGTLGGVVPALSPATSGGGSKREPLKNILTNPGKKGTGYGYANICLNPYPPHSEDDYNKGISMY-KQELQKH-KAALKAGAFRLNMHPSDYFNGNPYRSDVAAPAARKWAGDLPAKPITTPFRPSNPGKHLAGMKAGTFDPYPSHSADPYGIKYKRPV--NVVNKFGKTFVPPPGPKSTPCNSIINQNIMRSVNSTNYRSI 309
BLAST of UPF0602 protein C4orf47 homolog vs. TrEMBL
Match: A0A4W4FDP5 (Zgc:153146 OS=Electrophorus electricus OX=8005 PE=4 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.783e-43 Identity = 112/320 (35.00%), Postives = 161/320 (50.31%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSS-RQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRT--------LNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 K+DMERVGLF+EMGY ++ D Y PF Y + K K L + ++ K+A GYF F R+FE E+ T+ + ++R+++ Q +KN+GK F+ SN KK SG GS G + + FS + + KN T+P KKGSGYG+ V L+ + D YD AR M ++E+A H+ + L+ KE N Y P E+K V PF P S K +GG K G PYPP Y TR N K++ +PG KS +S++ NV+ +N+ N + I++VM Y Sbjct: 44 KSDMERVGLFREMGYVSVGDKYTPFIYRPFHESAHKDKQMLAEGSKRKSALQAGYFETQFKRIFEKEALTDRIKIQRQYKIQQTKKNLGKAFLPSNGEKKSSGIGSYYGTLGGPVQAFSPLQVPKKPYKAPGKNMYTSPPKKGSGYGFPGVTLSKIDSYSPDPYDRAREM-LKREVAAHKSKLKGGPFHLNLHPKECFDNNPYK---LEKPLPAAKKAEEKKTRFAV------PFKPSSPSKTIGGMKAGTFEPYPPHSADPY---VTRKPSTATTNKDAKIFCPSPGPKSTPVKSIISLNVDKLLNSTNYNQIQSVMAY 350
BLAST of UPF0602 protein C4orf47 homolog vs. TrEMBL
Match: A0A210QGT9 (UPF0602 protein C4orf47-like OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT05429 PE=4 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.450e-43 Identity = 108/311 (34.73%), Postives = 165/311 (53.05%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGG--MGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVM 1019 K DM+R+G+F+EMGY TI D YKP KGK L +++++A GYF + + RV EGE+ ++ + MRR+ R + ++N+GK F+ S+ KK SG GS G + I FS R +G KNF+TNPGKKG+G+G+ ++ L YP++++D Y+ AR + +KE+A H K + F YF NPY +G G + +PF P S K G K G PYP YK K + ++ +V N T K + + G KS S++ +N+ +N N S+ +++ Sbjct: 7 KNDMDRIGVFQEMGYVTIGDRYKPPGIQFNAAASKGKQILPGGSKTRSALQSGYFLEKYGRVMEGEAYSDPIKMRRQHRLKESQRNIGKAFLPSSGEKKPSGLGSHYGTLAGPISAFSPNARPGKGYKSPGKNFLTNPGKKGTGFGFVEITLGSYPKYQADAYERARELT-KKELANH-KNAVKGAAFKLNMHPKPYFDQNPYASDKLLGRRSVSAGVSKKE-DVKPFKPSSPGKKPAGMKAGTFDPYPSHSADPYKIKVSHSV--NVVNKTGKTFMPSQGPKSVPTNSIVNQNILKTINVQNYRSMTSII 312
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Cavefish
Match: zgc:153146 (chromosome 24 C4orf47 homolog [Source:NCBI gene;Acc:103030756]) HSP 1 Score: 146.747 bits (369), Expect = 1.067e-40 Identity = 111/319 (34.80%), Postives = 165/319 (51.72%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSS-RQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPY--EGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYP-----PAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 K+DMERVGLFKEMGY +I D Y PF Y + + K K L ++ K+ GYF F R+FE E+ T+L+ ++R+++ + ++N+GK F+ S+ KK+SG GS G + I S + + KN T+P KKGSGYGY V L + SD YD A+++ ++E+ H K L F F +NPY + + P ++ K ++ PF P S K +GG K G YP P P + K T L N K+++ +PG KS +S++ NVN VN+ N + I ++M Y Sbjct: 6 KSDMERVGLFKEMGYISIGDKYTPFLYRAFNESAHKNKQMLVGGSKKKSGLQTGYFDAQFKRIFEKEALTDLIKIQRQYKLEQTKRNLGKAFLPSSGEKKRSGIGSYYGTLGGSIQAMSPLKIPKQPYKSPGKNMYTSPPKKGSGYGYPGVTLGKLDLYSSDPYDRAKDI-VKRELIAH-KSMLKGGPFRLNLHPKECFDANPYKPDKPLPPSKKTEDKKTHF--GVPFKPSSPSKKIGGMKAGTFDLYPTHSVDPYIPHKPK---TAGL-----NKELKIFHPSPGPKSTPVKSIISLNVNKFVNSKNCNQIPSIMAY 312
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Sea Lamprey
Match: zgc:153146 (pep scaffold:Pmarinus_7.0:GL477013:54605:76454:-1 gene:ENSPMAG00000001809.1 transcript:ENSPMAT00000001995.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zgc:153146) HSP 1 Score: 139.428 bits (350), Expect = 1.032e-38 Identity = 104/305 (34.10%), Postives = 148/305 (48.52%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQDII-KGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNK------KNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLN---RKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNK--LYNHTPGSKSCIFQSVLQKNV 971 KTDMERVGLF E+GY +I D YK F + +G+ L + +S++A GYF++ F+RV +GE+ ++ + +RR+ R Q +KN+GK + S+ KK SG GS G + IP S +LP K +NF+TNP KKG+GYGY V + P + D YD A+ + RKEM H+K R P + F NPY P H ++ F P S K +GG K G YP Y K L N ++ +PG KS +S++ N+ Sbjct: 6 KTDMERVGLFSELGYISIGDKYKSSFNKAFNAAANRGRQMLTEGPKSRSALPAGYFSQGFTRVMQGEAYSDPIKIRRQRRLQEAKKNLGKALLPSSCPKKPSGLGSYYGTLGGPIPALSP------AQLPKKPYSAPGRNFVTNPPKKGTGYGYPQVMIGSLPPYMPDPYDRAKEIR-RKEMETHKKMVKGAPFRLNLHPLD----IFDVNPYRSDQ-PARATHPPRATKSSEKAFKPSSPAKKMGGMKAGTFDSYPSHSEDAYIVKRASALAGGSSGNKGGGHVFRPSPGPKSTPVRSIIDANI 298
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Nematostella
Match: EDO34007 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQL2]) HSP 1 Score: 156.762 bits (395), Expect = 5.502e-45 Identity = 103/303 (33.99%), Postives = 158/303 (52.15%), Query Frame = 3 Query: 93 KTDMERVGLFKEMGYHTINDPYKPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGG--MGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLN 995 K D+ RVGLF E+GY +I DPYK + KGK L ++ +++ DGYF + F+RV EGE+ ++ + RR R + + N+GK F+ SN K SG G+ G +P FS +T++ + KNF+TNP KKG+GYGY V + P++ SD YD R RK+ + + + F SYF NPY+ + P ++ ++ +PF P PK +GG K GC T YP ++ K +N + K++ + G KS +S++ +NV+ R+N LN Sbjct: 9 KNDLNRVGLFSELGYISIGDPYKIQNGNFNLAAHKGKQMLPGGSKIRSSKQDGYFDQKFNRVMEGEAFSDPVKRRRLDRLKATKLNIGKAFVPSNGDKLPSGIGNHYGTFAGAVPAFSPVTKSKSAHVSPGKNFLTNPPKKGTGYGYLQVTIGASPKYMSDAYD--RGKELRKKEMDTSGKQMKGGAFKLNLHPKSYFDGNPYKSDRPLPPVKDGRKAKPDF---KPFKPSHPPKEIGGMKAGCFTSYPSHSEDPFQPKKKKN-----GDGERKIFRPSQGPKSTPMKSIINQNVDRRINRLN 301
BLAST of UPF0602 protein C4orf47 homolog vs. Planmine SMEST
Match: SMESG000042363.1 (SMESG000042363.1) HSP 1 Score: 652.514 bits (1682), Expect = 0.000e+0 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 3 Query: 84 MTEKTDMERVGLFKEMGYHTINDPYKPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 MTEKTDMERVGLFKEMGYHTINDPYKPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY Sbjct: 1 MTEKTDMERVGLFKEMGYHTINDPYKPFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 314
BLAST of UPF0602 protein C4orf47 homolog vs. Planmine SMEST
Match: SMESG000078789.1 (SMESG000078789.1) HSP 1 Score: 191.045 bits (484), Expect = 7.136e-58 Identity = 123/317 (38.80%), Postives = 179/317 (56.47%), Query Frame = 3 Query: 84 MTEKTDMERVGLFKEMGYHTINDPYKPFFYSS-RQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGITRTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQK--RPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNLVHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMNY 1025 MT KTDMERVGLFKE+GYHTI DPYK Q KGK L +SK+A++ GYF + F+R+F+GES ++ + + R+ RN++ +K +GK ++ N K+ G+G+ G IP+F I++ R K KNF TNP KKG GYG+ V LN YPE++S+ YD ++++ ++E EH+ + +R F YF NPY GP E+ +VN + + F P S K+ GG K GC +P YK K + V +V N++ + + G KS SVLQ+N+ + N I++VMNY Sbjct: 1 MTSKTDMERVGLFKELGYHTIGDPYKSSALQQFNQSASKGKQVLPGGEKSKSASNVGYFQE-FTRIFDGESYSDPIKLMRKRRNESSKKKLGKNWVPVNGIKESCGSGTYYGTFSGAIPHFEAISKEQRAKGIQGKNFYTNPAKKGVGYGFVGVTLNKYPEYQSEKYDRSKDIT-KQENEEHKSKLHSRGVFRLGMHLRDYFDMNPYS---GPSEKYRVTSVNSKSQNFKTFKPSSPSKLDGGMKAGCFGSFPEYSSETYKAKIPKRPV-NVVNSSGRTFIPPIGPKSRPVNSVLQQNIIRTITPANYRQIQSVMNY 311
BLAST of UPF0602 protein C4orf47 homolog vs. Planmine SMEST
Match: SMESG000033217.1 (SMESG000033217.1) HSP 1 Score: 110.923 bits (276), Expect = 1.035e-27 Identity = 95/315 (30.16%), Postives = 151/315 (47.94%), Query Frame = 3 Query: 90 EKTDMERVGLFKEMGYHTINDPYK-PFFYSSRQDIIKGKGFLGDMTRSKAATDDGYFTKPFSRVFEGESETNLMAMRRRWRNQNKEKNVGKTFIMSNPGKKQSGTGSRMGCMDYMIPYFSGIT-RTVRGKLPNKKNFITNPGKKGSGYGYADVCLNPYPEWKSDVYDGARNMYFRKEMAEHQKRTLNRKEFIPTNAYGSYFYSNPYEGGMGPYEEKHGKTVNYLQKRPFIPGSYPKILGGNKDGCLTPYPPAFPAEYKDKFTRNL--VHDVRNNTNKLYNHTPGSKSCIFQSVLQKNVNFRVNNLNSHSIRNVMN 1022 +K D+E+ GLF+E Y + D YK P + KGK + + ++K+A + GYF+ F R FEGE+ ++ + +RR NKEK GK F + + K G GS G IP G T + + K+NF TN KKG+GYGY + N YPE+KS+ Y ++ E E+Q + + + + +F SNPY+G + + E K V K + S+ +P Y +K RNL + +V N++ + + PG K+ S+L KN+ +N N ++ +V + Sbjct: 5 KKNDLEKFGLFQEFPYQS--DLYKTPGNFEFNASSAKGKQIVIESNKTKSALNHGYFSN-FLRTFEGEAYSDPIKIRRELNRPNKEKLAGKVFHLPSIPKNPEGLGSYYGTFSGPIPAMLGETIQFSKSDEIKKRNFYTNCSKKGTGYGYVGLTFNKYPEYKSEPYGILKS----SEEKENQNKPFHTVKSL------DFFDSNPYKGSI--FSEGKEKPVKENLKSFHVNTSH-------LSNSFNAFPKYENDVYDEKLKRNLPYIKNVMNDSKRTFGAIPGPKTMRTFSILNKNIERSINAQNYGTVGSVFS 297 The following BLAST results are available for this feature:
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 3
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of UPF0602 protein C4orf47 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of UPF0602 protein C4orf47 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of UPF0602 protein C4orf47 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of UPF0602 protein C4orf47 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035930 ID=SMED30035930|Name=UPF0602 protein C4orf47 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1130bpback to top protein sequence of SMED30035930-orf-1 >SMED30035930-orf-1 ID=SMED30035930-orf-1|Name=SMED30035930-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=315bp MTEKTDMERVGLFKEMGYHTINDPYKPFFYSSRQDIIKGKGFLGDMTRSKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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