SWI/SNF complex subunit SMARCC2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035929 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 19
Homology
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Human
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 441/1039 (42.44%), Postives = 598/1039 (57.56%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQ--ASVVKSQSNNSAIDKQPTVTANPKDLSNSDN---VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG--KDPIDKAKEGDXXXX----XXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM N++++ ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE+ S ++ E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q A + D P +L S + +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG D ++ +E N E + K KE + +++ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWM---------NEEDYEVNDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEK------PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 978
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Human
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 442/1039 (42.54%), Postives = 598/1039 (57.56%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQ--ASVVKSQSNNSAIDKQPTVTANPKDLSNSDN---VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG--KDPIDKAKEGDXXXX----XXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EE ++ ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE+ S ++ E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q A + D P +L S + +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG D ++ +E N E + K KE + +++ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWMNEE---------DYEVNDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEK------PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 978
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Human
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]) HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0 Identity = 441/1030 (42.82%), Postives = 597/1030 (57.96%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDE------ETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG--KDPIDKAKEGDXXXX----XXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM N++++ ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE ET G + ++ N + H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L QP P+ S S +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG D ++ +E N E + K KE + +++ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWM---------NEEDYEVNDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDESMETTGK-DEDENSTGNKGEQTKNPDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPL------------------QPKT---PQQTSASQQMLNFPDKGKEK------PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 947
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Human
Match: SMARCC1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]) HSP 1 Score: 564.688 bits (1454), Expect = 1.563e-180 Identity = 361/830 (43.49%), Postives = 488/830 (58.80%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEV--PSN----SLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMS---VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAK 2489 ++KDG P +F+E+PE ++ D+VR WL ++ KKY D TNK+LA L QLLQ+QE+ FGK + KLP CF DFK GG+L HI A KYK++QG RRFD Q+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++A+H ++P +S +++ R VMR+ + +++HW PDS+D W+ + D + P + W++ +W+L T NEWM+EED+ + NRKP+ R+ + + +P +++ A + + +K P P+ E R+K ASL R+S+ KE+D+ ED + P PN +EEV P N NTP +G + A L + DEET +G + A D+S D+ VTEQ + IIIPSY++WFDYN IHVIERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + A +GPP T HF+VL D+ +GL L ++ P V A + L N K+ + P + ++ L+TD Y +S + ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A + VDP YGLE +AG P + K Sbjct: 32 RRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSS-QDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPI------PEKPWKVHVKWILDTDIFNEWMNEEDYEV---------DENRKPVSFRQRIS--------TKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTE----SRKKSGKKGQASLYGKRRSQ-KEEDEQEDLTKDMEDPTP-VPN-IEEVVLPKNVNLKKDSENTPVKGGTVAD--------LDEQDEETVTAGGKEDEDPAKG-----DQSRSVDLGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMA--MGPPPTPHFNVLADTPSGLVPLHLRS---------------PQVPAAQQML------NFPEKNKEK------PVDLQNFGLRTDIYSKKTLAKS---KGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP-TYGLESSCIAGTGPDEPEK 772
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Human
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]) HSP 1 Score: 436.032 bits (1120), Expect = 3.730e-131 Identity = 299/590 (50.68%), Postives = 376/590 (63.73%), Query Frame = 3 Query: 1350 FHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQ--ASVVKSQSNNSAIDKQPTVTANPKDLSNSDN---VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG--KDPIDKAKEGDXXXX----XXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q A + D P +L S + +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG D ++ +E N E + K KE + +++ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 412 LHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEK------PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 978 HSP 2 Score: 236.498 bits (602), Expect = 1.076e-62 Identity = 114/266 (42.86%), Postives = 165/266 (62.03%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EED+ Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWMNEEDY 257
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Celegans
Match: swsn-1 (SWI/SNF nucleosome remodeling complex component; SWI3-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF87]) HSP 1 Score: 335.88 bits (860), Expect = 2.820e-99 Identity = 183/391 (46.80%), Postives = 239/391 (61.13%), Query Frame = 3 Query: 1356 ADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLE------------GDAA--LMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDP----DKYGL---EEVAG 2465 A+ +V EQ H I++PSY+ WFDYN+IH IE+RA+PEFF GKNKSK+ +VY+AYRNFM+DTYRLNP EY++ TACRRNL GDVCSI+R+H+FLEQWGL+NYQVD + + + TSHF VL D+ TG+Q + NP S + + + E SIS L+ DQY + + + G PP ++W++QET LLLE LEM+KDDWNKV +HVG+RTQ EC+L FL+LPI+DPYL G AA ++ L +QP+PFS+SGNP+MSTVAFLAS VDP++A+ A KAA+ EF +LKEE+P + + H+ V E VD K GL EE AG Sbjct: 72 AEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAPP--PTSHFMVLADTPTGIQPM------------------------NPPG-KESAGASGEPPKEEIKTEI---ESISTPGLKIDQY-----QKQAIAMRTKGA---PPG------RDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 418 HSP 2 Score: 68.1662 bits (165), Expect = 3.659e-11 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LAQ EE++IK LVAQLVE Q+KK+E+KL+ F ELE I+++E E LE QR QL+L+RQAFHM+ LK +E+RA+ H++ Sbjct: 463 HLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRAKHEAHSRM 542
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Celegans
Match: swsn-1 (SWI/SNF nucleosome remodeling complex component; SWI3-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF87]) HSP 1 Score: 335.109 bits (858), Expect = 5.118e-99 Identity = 183/391 (46.80%), Postives = 239/391 (61.13%), Query Frame = 3 Query: 1356 ADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLE------------GDAA--LMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDP----DKYGL---EEVAG 2465 A+ +V EQ H I++PSY+ WFDYN+IH IE+RA+PEFF GKNKSK+ +VY+AYRNFM+DTYRLNP EY++ TACRRNL GDVCSI+R+H+FLEQWGL+NYQVD + + + TSHF VL D+ TG+Q + NP S + + + E SIS L+ DQY + + + G PP ++W++QET LLLE LEM+KDDWNKV +HVG+RTQ EC+L FL+LPI+DPYL G AA ++ L +QP+PFS+SGNP+MSTVAFLAS VDP++A+ A KAA+ EF +LKEE+P + + H+ V E VD K GL EE AG Sbjct: 72 AEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAPP--PTSHFMVLADTPTGIQPM------------------------NPPG-KESAGASGEPPKEEIKTEI---ESISTPGLKIDQY-----QKQAIAMRTKGA---PPG------RDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 418 HSP 2 Score: 68.1662 bits (165), Expect = 3.666e-11 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LAQ EE++IK LVAQLVE Q+KK+E+KL+ F ELE I+++E E LE QR QL+L+RQAFHM+ LK +E+RA+ H++ Sbjct: 463 HLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRAKHEAHSRM 542
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Celegans
Match: swsn-1 (SWI/SNF nucleosome remodeling complex component; SWI3-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF87]) HSP 1 Score: 286.189 bits (731), Expect = 1.082e-82 Identity = 163/358 (45.53%), Postives = 212/358 (59.22%), Query Frame = 3 Query: 1455 LPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLE------------GDAA--LMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDP----DKYGL---EEVAG 2465 +PEFF GKNKSK+ +VY+AYRNFM+DTYRLNP EY++ TACRRNL GDVCSI+R+H+FLEQWGL+NYQVD + + + TSHF VL D+ TG+Q + NP S + + + E SIS L+ DQY + + + G PP ++W++QET LLLE LEM+KDDWNKV +HVG+RTQ EC+L FL+LPI+DPYL G AA ++ L +QP+PFS+SGNP+MSTVAFLAS VDP++A+ A KAA+ EF +LKEE+P + + H+ V E VD K GL EE AG Sbjct: 1 MPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAPP--PTSHFMVLADTPTGIQPM------------------------NPPG-KESAGASGEPPKEEIKTEI---ESISTPGLKIDQY-----QKQAIAMRTKGA---PPG------RDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 314 HSP 2 Score: 68.1662 bits (165), Expect = 3.296e-11 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LAQ EE++IK LVAQLVE Q+KK+E+KL+ F ELE I+++E E LE QR QL+L+RQAFHM+ LK +E+RA+ H++ Sbjct: 359 HLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRAKHEAHSRM 438
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Celegans
Match: swsn-1 (SWI/SNF nucleosome remodeling complex component; SWI3-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF87]) HSP 1 Score: 286.189 bits (731), Expect = 1.082e-82 Identity = 163/358 (45.53%), Postives = 212/358 (59.22%), Query Frame = 3 Query: 1455 LPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLE------------GDAA--LMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDP----DKYGL---EEVAG 2465 +PEFF GKNKSK+ +VY+AYRNFM+DTYRLNP EY++ TACRRNL GDVCSI+R+H+FLEQWGL+NYQVD + + + TSHF VL D+ TG+Q + NP S + + + E SIS L+ DQY + + + G PP ++W++QET LLLE LEM+KDDWNKV +HVG+RTQ EC+L FL+LPI+DPYL G AA ++ L +QP+PFS+SGNP+MSTVAFLAS VDP++A+ A KAA+ EF +LKEE+P + + H+ V E VD K GL EE AG Sbjct: 1 MPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAPP--PTSHFMVLADTPTGIQPM------------------------NPPG-KESAGASGEPPKEEIKTEI---ESISTPGLKIDQY-----QKQAIAMRTKGA---PPG------RDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 314 HSP 2 Score: 68.1662 bits (165), Expect = 3.296e-11 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LAQ EE++IK LVAQLVE Q+KK+E+KL+ F ELE I+++E E LE QR QL+L+RQAFHM+ LK +E+RA+ H++ Sbjct: 359 HLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRAKHEAHSRM 438
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Celegans
Match: swsn-1 (SWI/SNF nucleosome remodeling complex component; SWI3-like protein [Source:UniProtKB/TrEMBL;Acc:G5EF87]) HSP 1 Score: 285.804 bits (730), Expect = 1.775e-82 Identity = 163/358 (45.53%), Postives = 212/358 (59.22%), Query Frame = 3 Query: 1455 LPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYL------------EGDAA--LMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDP----DKYGL---EEVAG 2465 +PEFF GKNKSK+ +VY+AYRNFM+DTYRLNP EY++ TACRRNL GDVCSI+R+H+FLEQWGL+NYQVD + + + TSHF VL D+ TG+Q + NP S + + + E SIS L+ DQY + + + G PP ++W++QET LLLE LEM+KDDWNKV +HVG+RTQ EC+L FL+LPI+DPYL G AA ++ L +QP+PFS+SGNP+MSTVAFLAS VDP++A+ A KAA+ EF +LKEE+P + + H+ V E VD K GL EE AG Sbjct: 1 MPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAPP--PTSHFMVLADTPTGIQPM------------------------NPPG-KESAGASGEPPKEEIKTEI---ESISTPGLKIDQY-----QKQAIAMRTKGA---PPG------RDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 314 HSP 2 Score: 68.1662 bits (165), Expect = 3.509e-11 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LAQ EE++IK LVAQLVE Q+KK+E+KL+ F ELE I+++E E LE QR QL+L+RQAFHM+ LK +E+RA+ H++ Sbjct: 359 HLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRAKHEAHSRM 438
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Fly
Match: mor (gene:FBgn0002783 transcript:FBtr0302550) HSP 1 Score: 532.332 bits (1370), Expect = 4.358e-168 Identity = 336/830 (40.48%), Postives = 479/830 (57.71%), Query Frame = 3 Query: 36 KKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYW--QNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDF---QSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISN---IPSDCTLSPE-PAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNT--PSRGASAAGNIDN---RNNVLYDLDEETQG--------SGXXXXXXXXXXXXXXXDESFHA----DM--SVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSA-----IDKQPTVTANPKDLSNSDNV-NLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGK 2423 KKDG PN F+++PE + F+++R WL +NCKKY ++P+T +SLA L LQY E GK + + ++P+ CF DFK GG L IFS +++++Q ++FDF ++P+R + N+++ ++I+ L + P +++ P I KLR ++IV + +ATH+++P D+ AR + + G +MLHW P+S+D+W N +P +PE PA R W + W++ + NEWM+EED+ E +Q +K R DD+ + +P++ + K K++R SP+ S GKR++ V N + D + P PN E +N+ ++T P+ G + G+ D + + DLD+E G +G NS + N + F + DM +VTEQ H II+PSYSAWFDYNSIHVIE+RA+PEFF KNKSK+ E+YMAYRNFMIDTYRLNP EYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQ+D + + T +GPP TSHFH+L+D+ +GLQS+ Q K+Q ++A +DK+P +L + + +++++ ++ + S +S + L+ DQY + + N T + ++EW+DQETLLLLEGLEM+KDDWNKV EHVGSRTQ+ECIL+FLRLPIEDPYLE D + L QPIPFSKSGNPIMSTVAFLAS VDPR+A+ AAKAA+ EF+ +K+EVP ++ H V A GK Sbjct: 7 KKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKNSADPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKGFEGKLREILDNRRVEIVSDEEDATHIVYPVVDP--HPDEYARPIFKRGGHVMLHWYYFPESYDSWAVNNFDLPDHIPENPESPAER--------WRVSASWIVDLEQYNEWMAEEDY-------EVDEQGKKKTHKQRMSI--DDIMSFGDEKKKPAA--------SSGGGKQKRRRSPSPASSASTSKPGKRKRSPAVVHKKSRNDDDDEDLTRDLDDP---------PAEPNVQEVHKANAALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADVRPTP--MGPPPTSHFHILSDTPSGLQSINPQ----KTQQPSAAKTLLDLDKKPLGKDGGLELGDKSGLTGIKTEALENGAAGGLSSGVSQFGLKLDQY----AKKPAAMRNRTAASM---------AREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLACQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHLKNVEKASAGGK 781 HSP 2 Score: 65.4698 bits (158), Expect = 3.594e-10 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELEA +ERE E LE QRQQL+ +RQ FH+E LK E RAR H++ Sbjct: 899 HLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRL 978
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Fly
Match: mor (gene:FBgn0002783 transcript:FBtr0083238) HSP 1 Score: 532.717 bits (1371), Expect = 1.181e-167 Identity = 336/830 (40.48%), Postives = 479/830 (57.71%), Query Frame = 3 Query: 36 KKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYW--QNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDF---QSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISN---IPSDCTLSPE-PAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNT--PSRGASAAGNIDN---RNNVLYDLDEETQG--------SGXXXXXXXXXXXXXXXDESFHA----DM--SVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSA-----IDKQPTVTANPKDLSNSDNV-NLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGK 2423 KKDG PN F+++PE + F+++R WL +NCKKY ++P+T +SLA L LQY E GK + + ++P+ CF DFK GG L IFS +++++Q ++FDF ++P+R + N+++ ++I+ L + P +++ P I KLR ++IV + +ATH+++P D+ AR + + G +MLHW P+S+D+W N +P +PE PA R W + W++ + NEWM+EED+ E +Q +K R DD+ + +P++ + K K++R SP+ S GKR++ V N + D + P PN E +N+ ++T P+ G + G+ D + + DLD+E G +G NS + N + F + DM +VTEQ H II+PSYSAWFDYNSIHVIE+RA+PEFF KNKSK+ E+YMAYRNFMIDTYRLNP EYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQ+D + + T +GPP TSHFH+L+D+ +GLQS+ Q K+Q ++A +DK+P +L + + +++++ ++ + S +S + L+ DQY + + N T + ++EW+DQETLLLLEGLEM+KDDWNKV EHVGSRTQ+ECIL+FLRLPIEDPYLE D + L QPIPFSKSGNPIMSTVAFLAS VDPR+A+ AAKAA+ EF+ +K+EVP ++ H V A GK Sbjct: 7 KKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKNSADPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKGFEGKLREILDNRRVEIVSDEEDATHIVYPVVDP--HPDEYARPIFKRGGHVMLHWYYFPESYDSWAVNNFDLPDHIPENPESPAER--------WRVSASWIVDLEQYNEWMAEEDY-------EVDEQGKKKTHKQRMSI--DDIMSFGDEKKKPAA--------SSGGGKQKRRRSPSPASSASTSKPGKRKRSPAVVHKKSRNDDDDEDLTRDLDDP---------PAEPNVQEVHKANAALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADVRPTP--MGPPPTSHFHILSDTPSGLQSINPQ----KTQQPSAAKTLLDLDKKPLGKDGGLELGDKSGLTGIKTEALENGAAGGLSSGVSQFGLKLDQY----AKKPAAMRNRTAASM---------AREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLACQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHLKNVEKASAGGK 781 HSP 2 Score: 65.4698 bits (158), Expect = 3.217e-10 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQF 3062 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELEA +ERE E LE QRQQL+ +RQ FH+E LK E RAR H++ Sbjct: 963 HLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRL 1042
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Zebrafish
Match: smarcc1a (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]) HSP 1 Score: 559.296 bits (1440), Expect = 7.390e-179 Identity = 335/823 (40.70%), Postives = 477/823 (57.96%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISR-KCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVK---------EXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 +KKDG P+ +++E+ E ++ +TVR W+ ++ KK+ Q D T+K+LA L QLLQ+QE+ FG+ + ++ KLP F DFKPGG+L HI + K+KS+QG RRFD Q+PSR +RNVEMFM I+ L + +PIV++ + + KL+ ++ I E+ ++ATH+++P ++ + ++ R VMR+ + +++HW PDS+D W+S D + P+ S + W + +W++ T NEWM+EED+ + N+KP+ R + + G+ +VSS+ K +GK+R+++ ++ RK K +D+ D E P+ V + +L +N + S N + + DLD++ S + + + ++ +VTEQ H IIIPSY+AWFDYNSIH IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT T+CRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + +GPP TSHF+VL D+ +GL L ++ P+ +N K D P+ + ++ L+TD Y S ++ + + GG ++W++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIED YLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+A+ AAKAAL+EFSR++EEVP +V+ H KV A S VDP +GLE +AG Sbjct: 29 RKKDGGPSSKYWESSETVSQLETVRLWIGKHYKKHVQTDSPTSKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPGGALCHILGSAYKFKSEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNSLTRPIVYIVSDVEQKQANKLKDIIKRHQGTITEDKSKATHIIYPSPTQ-MEEEEWLRPVMRKDKQVLVHWGYYPDSYDIWVSTSDVDADVEDPPS------SEKPWRVHAKWVIDTDAFNEWMNEEDYEV---------DENKKPVSFRQRIFPGE------DVSSR-----------------------TPDRKERKSLVAGKKRRRSPSPPSTPVESRKKGKKGNPGSQWRRRGQPIDDEQDEDSTKDLEDPSPVPGMEEVTLPKNVNQKKDSE--NTPVKGGIHNDLDDQEDDSVTSGGKEDDEQSKAEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRPLP--MGPPPTSHFNVLADTPSGLVPLHHRP---------------------PQVPPAQQMLNFPEKGKDK------PTDLQNFGLRTDIY----SKKNLKGKGAAGG------------RDWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDQYLESSDASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALDEFSRVREEVPAELVEAHVKKVQEAARSTGKVDP-AFGLESSGIAG 758
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Zebrafish
Match: smarcc2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]) HSP 1 Score: 434.876 bits (1117), Expect = 8.379e-133 Identity = 293/575 (50.96%), Postives = 370/575 (64.35%), Query Frame = 3 Query: 1350 FHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLE--EVAG------KDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSET---DNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ + L L +AS ++ S+ + V P DL N + L+TD Y S +S +N + ++EW+DQETLLLLEGLEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE +A + L YQP+PFS++GNP+MSTVAFLAS VDPR+AS AAK+AL EFSR+KEEVP +V+ H +V A + DP YGLE +AG P D E + E + + + S + E + K E E E E + ++++ A E+ + + E +E ++ E++ K+ ++D LA AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ+FHME LK E RAR Sbjct: 410 LHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTP--MGPPPTSHFHVLADTPSSLVPLQPKAS--QTSSSQQMLSFPEKVKDKPADLQN-------------------------FGLRTDVY----SKKSGPAKNKNAA---------SATREWTDQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARASGRQDP-LYGLEGSGIAGTGLEDSDKPSDDGGEENKSSEGQPSQEKRDSKESKDGASEEEEKQGENGKKEEERAREVETERETEKTDSEMADGEKEKERKEGSEEAQRDGETEGEKKAKV-ERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRAR 939 HSP 2 Score: 230.335 bits (586), Expect = 2.349e-61 Identity = 107/264 (40.53%), Postives = 167/264 (63.26%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 + ++KKDG PN +++E + ++ FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FG+ + + KLP+ CF DFK GG+L HI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P+++LS I + + KL+ ++ + E+ ++H++ P + L +++ R VM+ + ++LHW PDS+D WIS + + PA + + ++ +W+L + NEWM+EED+ Sbjct: 1 MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGRHVSNPPLTKLPVKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVPIPAS-LEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPA------AEKPRKVHAKWILDLDQFNEWMNEEDY 257
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Zebrafish
Match: BX548005.1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:NCBI gene;Acc:567476]) HSP 1 Score: 430.254 bits (1105), Expect = 4.534e-131 Identity = 293/576 (50.87%), Postives = 370/576 (64.24%), Query Frame = 3 Query: 1350 FHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILR-VHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLE--EVAG------KDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSET---DNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+R VHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ + L L +AS ++ S+ + V P DL N + L+TD Y S +S +N + ++EW+DQETLLLLEGLEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE +A + L YQP+PFS++GNP+MSTVAFLAS VDPR+AS AAK+AL EFSR+KEEVP +V+ H +V A + DP YGLE +AG P D E + E + + + S + E + K E E E E + ++++ A E+ + + E +E ++ E++ K+ ++D LA AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ+FHME LK E RAR Sbjct: 410 LHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRFVHAFLEQWGLINYQVDSESRPTP--MGPPPTSHFHVLADTPSSLVPLQPKAS--QTSSSQQMLSFPEKVKDKPADLQN-------------------------FGLRTDVY----SKKSGPAKNKNAA---------SATREWTDQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARASGRQDP-LYGLEGSGIAGTGLEDSDKPSDDGGEENKSSEGQPSQEKRDSKESKDGASEEEEKQGENGKKEEERAREVETERETEKTDSEMADGEKEKERKEGSEEAQRDGETEGEKKAKV-ERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRAR 940 HSP 2 Score: 230.335 bits (586), Expect = 2.610e-61 Identity = 107/264 (40.53%), Postives = 167/264 (63.26%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 + ++KKDG PN +++E + ++ FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FG+ + + KLP+ CF DFK GG+L HI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P+++LS I + + KL+ ++ + E+ ++H++ P + L +++ R VM+ + ++LHW PDS+D WIS + + PA + + ++ +W+L + NEWM+EED+ Sbjct: 1 MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGRHVSNPPLTKLPVKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVPIPAS-LEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPA------AEKPRKVHAKWILDLDQFNEWMNEEDY 257
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Zebrafish
Match: smarcc1b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-273]) HSP 1 Score: 325.865 bits (834), Expect = 5.646e-94 Identity = 197/393 (50.13%), Postives = 249/393 (63.36%), Query Frame = 3 Query: 1203 NTPSRGASAAGNIDNRNNVLYDL-DEETQ---GSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVP 2366 NTP +G A D ++L + DEE Q G G + S TEQ H II+P+Y++WFDYN IH IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT T+ RRNLTGDVC+++RVH+FLEQWGLINYQVD E + T HF+VLTD+ +GL L ++ P +S S + ++ KS + PS + ++ L++D Y + + ++ ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ++CIL+FLRLPIEDPYLE A M L YQP+PFS+SGNP+MSTVAFLAS VD R+AS AAKAAL EFSR +E+ P Sbjct: 375 NTPVKGGIMADLDDQEEDLLAGVRDEEEQREFGRG------------------MEGEESATEQTHHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTSSRRNLTGDVCALIRVHSFLEQWGLINYQVDAESRPLPMGPP--PTPHFNVLTDAPSGLVPLQHR----------------------PLQVSASQHMLHFPEKSREK------PSDLQNFGLRSDIY----AKKHPKSKGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPVPFSQSGNPVMSTVAFLASVVDSRVASAAAKAALEEFSRAREDAP 703 HSP 2 Score: 196.823 bits (499), Expect = 7.432e-51 Identity = 102/277 (36.82%), Postives = 165/277 (59.57%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLP--GNQQEFAKQ 851 +K DG P +++ENPEI++ +TVR+W+ ++ KK Q+D + KSL L QLLQ+QE++FG+ N+ + KLP CF D +PGG+L HI + K+K++QG RRFD Q+PSR +RN EM ++ L + +P+V+LSP + + KL+ + + + E+ + ATH ++P S ++ R VMR + +M+HW PDS+D+ I S++ +D P P ++ ++ RW+L T NEWM+EED+ + GN F ++ Sbjct: 26 RKMDGGPCCKYWENPEIMSQMETVRSWIGKHYKKNVQSDAPSCKSLTGLVIQLLQFQEDSFGRRANKPNFTKLPAKCFQDLRPGGALCHILGSVYKFKTEQGWRRFDLQNPSRLDRNTEMLGCVEKTLMQNNLLSRPVVYLSPDLEQKQTSKLKDIILRHNGTVTEDKSLATHQIYP--SSTTDEEEWFRPVMRLDQQVMVHWGMCPDSYDSLISASDVDADVEEPPNP--------DRCLKVSSRWVLDTDTYNEWMNEEDYEIDENGNSLRFRRR 292 HSP 3 Score: 63.1586 bits (152), Expect = 1.965e-9 Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR----------VVGHNQFHPINNINHQG 3092 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LEQQRQQLL +RQ FH+E +K E + R G +Q P N HQG Sbjct: 837 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQTFHLEQVKYAEQKVRQNVEQQQPQQQTGGSQSSPTFNPLHQG 936
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Zebrafish
Match: mysm1 (Myb-like, SWIRM and MPN domains 1 [Source:NCBI gene;Acc:561225]) HSP 1 Score: 65.0846 bits (157), Expect = 5.954e-10 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 1398 PSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNL--TGDVCSILRVHAFLEQWGLINYQVDQ 1667 P D N+I E++A+ EFF G+ SK+ E Y+ RN+++D +R + +YL T+ R L GDV I R+H +LE G IN+ DQ Sbjct: 316 PEQEVELDLNTITEEEKQAISEFFEGR-PSKTPERYLKIRNYILDQWRRSKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFNCDQ 406
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Xenopus
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:NCBI gene;Acc:100101794]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 363/833 (43.58%), Postives = 481/833 (57.74%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRR-----------KQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 + ++KKDG PN +FYE + +A FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLP+ CF DFK G+LSHI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P ++L P I ++ KL+ ++ + E+ + A+H++ P S L +++ R +++ + ++LHW PDS+D W+ + ++ P + + ++ +W+L T NEWM+EED+ E + N P+ RK + L + S P S K N KR+ K+ V+ KSK ++ ++D + PN VEEV +L + ++ S + I + + DLDE+ S +S I E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L QP P+ S S +N KS D PS + ++ L+TD Y ++ + S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL+EFS++KEEVP +V+ H KV A DP YGLE +AG Sbjct: 1 MAVRKKDGGPNVKFYEASDTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKVSGALSHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHIVVPVPSN-LEDEEWVRPILKRDKQVLLHWGYYPDSYDTWVPASEVEASVEDAPTV------EKPRKVHAKWILDTDSFNEWMNEEDY-------ELTDEKN--PVARRKKISAKTLT---DEVSSPDS----------------------DRRDKKGPNYKKRKRSPSPPPSAEAKKKTVKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN-VEEV---TLPKTVNTKKDSESAPI--KGGTVTDLDEQEDESMDAVTKEEDETSSGIKGEQMKTSDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPL------------------QPKT---PQQSSASQQMLNFPDKSKDK------PSDLQNFGLRTDMY-----SKKNTTSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPTALVEAHVRKVEDAARITGKADP-SYGLESSGIAG 742 HSP 2 Score: 61.2326 bits (147), Expect = 1.128e-8 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ FHME LK E RAR Sbjct: 885 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQNFHMEQLKYAEIRAR 952
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Xenopus
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:NCBI gene;Acc:100101794]) HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0 Identity = 363/833 (43.58%), Postives = 481/833 (57.74%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRR-----------KQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 + ++KKDG PN +FYE + +A FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLP+ CF DFK G+LSHI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P ++L P I ++ KL+ ++ + E+ + A+H++ P S L +++ R +++ + ++LHW PDS+D W+ + ++ P + + ++ +W+L T NEWM+EED+ E + N P+ RK + L + S P S K N KR+ K+ V+ KSK ++ ++D + PN VEEV +L + ++ S + I + + DLDE+ S +S I E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L QP P+ S S +N KS D PS + ++ L+TD Y ++ + S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL+EFS++KEEVP +V+ H KV A DP YGLE +AG Sbjct: 1 MAVRKKDGGPNVKFYEASDTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKVSGALSHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHIVVPVPSN-LEDEEWVRPILKRDKQVLLHWGYYPDSYDTWVPASEVEASVEDAPTVE------KPRKVHAKWILDTDSFNEWMNEEDY-------ELTDEKN--PVARRKKISAKTLT---DEVSSPDS----------------------DRRDKKGPNYKKRKRSPSPPPSAEAKKKTVKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN-VEEV---TLPKTVNTKKDSESAPI--KGGTVTDLDEQEDESMDAVTKEEDETSSGIKGEQMKTSDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPL------------------QPKT---PQQSSASQQMLNFPDKSKDK------PSDLQNFGLRTDMY-----SKKNTTSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPTALVEAHVRKVEDAARITGKADP-SYGLESSGIAG 742 HSP 2 Score: 61.6178 bits (148), Expect = 1.056e-8 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ FHME LK E RAR Sbjct: 885 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQNFHMEQLKYAEIRAR 952
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Xenopus
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:NCBI gene;Acc:100101794]) HSP 1 Score: 605.52 bits (1560), Expect = 0.000e+0 Identity = 361/837 (43.13%), Postives = 487/837 (58.18%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRR-----------KQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVK-----SQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 + ++KKDG PN +FYE + +A FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLP+ CF DFK G+LSHI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P ++L P I ++ KL+ ++ + E+ + A+H++ P S L +++ R +++ + ++LHW PDS+D W+ + ++ P + + ++ +W+L T NEWM+EED+ L + A+ RK I ++ + + S P S K N KR+ K+ V+ KSK ++ ++D + PN VEEV +L + ++ S + I + + DLDE+ S +S I E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L + V +S+ S+ +Q +N KS D PS + ++ L+TD Y S ++ +++ + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL+EFS++KEEVP +V+ H KV A DP YGLE +AG Sbjct: 1 MAVRKKDGGPNVKFYEASDTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKVSGALSHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHIVVPVPSN-LEDEEWVRPILKRDKQVLLHWGYYPDSYDTWVPASEVEASVEDAPTV------EKPRKVHAKWILDTDSFNEWMNEEDYELTDEKNPVAR---RKKISAK---------TLTDEVSSPDS----------------------DRRDKKGPNYKKRKRSPSPPPSAEAKKKTVKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN-VEEV---TLPKTVNTKKDSESAPI--KGGTVTDLDEQEDESMDAVTKEEDETSSGIKGEQMKTSDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQVGMTREMPESHQSSASQQ--------------MLNFPDKSKDK------PSDLQNFGLRTDMY----SKKNTTSKSKAAA---------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPTALVEAHVRKVEDAARITGKADP-SYGLESSGIAG 753 HSP 2 Score: 61.2326 bits (147), Expect = 1.168e-8 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ FHME LK E RAR Sbjct: 892 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQNFHMEQLKYAEIRAR 959
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Xenopus
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:NCBI gene;Acc:100101794]) HSP 1 Score: 605.52 bits (1560), Expect = 0.000e+0 Identity = 361/832 (43.39%), Postives = 483/832 (58.05%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRR-----------KQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 + ++KKDG PN +FYE + +A FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLP+ CF DFK G+LSHI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P ++L P I ++ KL+ ++ + E+ + A+H++ P S L +++ R +++ + ++LHW PDS+D W+ + ++ P + + ++ +W+L T NEWM+EED+ E + N P+ RK + L + S P S K N KR+ K+ V+ KSK ++ ++D + PN VEEV +L + ++ S + I + + DLDE+ S +S I E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L QP P+ ++ +N KS D PS + ++ L+TD Y S ++ +++ + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL+EFS++KEEVP +V+ H KV A DP YGLE +AG Sbjct: 1 MAVRKKDGGPNVKFYEASDTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKVSGALSHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHIVVPVPSN-LEDEEWVRPILKRDKQVLLHWGYYPDSYDTWVPASEVEASVEDAPTV------EKPRKVHAKWILDTDSFNEWMNEEDY-------ELTDEKN--PVARRKKISAKTLT---DEVSSPDS----------------------DRRDKKGPNYKKRKRSPSPPPSAEAKKKTVKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN-VEEV---TLPKTVNTKKDSESAPI--KGGTVTDLDEQEDESMDAVTKEEDETSSGIKGEQMKTSDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPL------------------QPKT---PQSSASQQMLNFPDKSKDK------PSDLQNFGLRTDMY----SKKNTTSKSKAAA---------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPTALVEAHVRKVEDAARITGKADP-SYGLESSGIAG 741 HSP 2 Score: 61.2326 bits (147), Expect = 1.300e-8 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ FHME LK E RAR Sbjct: 796 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQNFHMEQLKYAEIRAR 863
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Xenopus
Match: SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:NCBI gene;Acc:100101794]) HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0 Identity = 362/833 (43.46%), Postives = 484/833 (58.10%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRR-----------KQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 + ++KKDG PN +FYE + +A FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLP+ CF DFK G+LSHI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P ++L P I ++ KL+ ++ + E+ + A+H++ P S L +++ R +++ + ++LHW PDS+D W+ + ++ P + + ++ +W+L T NEWM+EED+ L + A+ RK I ++ + + S P S K N KR+ K+ V+ KSK ++ ++D + PN VEEV +L + ++ S + I + + DLDE+ S +S I E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L QP P+ S S +N KS D PS + ++ L+TD Y S ++ +++ + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL+EFS++KEEVP +V+ H KV A DP YGLE +AG Sbjct: 1 MAVRKKDGGPNVKFYEASDTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKVSGALSHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHIVVPVPSN-LEDEEWVRPILKRDKQVLLHWGYYPDSYDTWVPASEVEASVEDAPTV------EKPRKVHAKWILDTDSFNEWMNEEDYELTDEKNPVAR---RKKISAK---------TLTDEVSSPDS----------------------DRRDKKGPNYKKRKRSPSPPPSAEAKKKTVKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN-VEEV---TLPKTVNTKKDSESAPI--KGGTVTDLDEQEDESMDAVTKEEDETSSGIKGEQMKTSDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPL------------------QPKT---PQQSSASQQMLNFPDKSKDK------PSDLQNFGLRTDMY----SKKNTTSKSKAAA---------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPTALVEAHVRKVEDAARITGKADP-SYGLESSGIAG 742 HSP 2 Score: 61.2326 bits (147), Expect = 1.191e-8 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQ FHME LK E RAR Sbjct: 816 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQNFHMEQLKYAEIRAR 883
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Mouse
Match: Smarcc2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:MGI Symbol;Acc:MGI:1915344]) HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0 Identity = 358/828 (43.24%), Postives = 481/828 (58.09%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQ--ASVVKSQSNNSAIDKQPTVTANPKDLSNSDN---VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLE 2453 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ I E+ + A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EE ++ ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE+ S ++ E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q A + D P +L +S + +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWMNEE---------DYEVSDDKSPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQDDESMETTGKDEDENSTGNKGEQTKNPDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKPPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQSSASQQMLNFPEKGKEK------PADMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLE 767 HSP 2 Score: 63.5438 bits (153), Expect = 1.707e-9 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 978
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Mouse
Match: Smarcc2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:MGI Symbol;Acc:MGI:1915344]) HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0 Identity = 354/817 (43.33%), Postives = 473/817 (57.89%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDE-----SFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLE 2453 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ I E+ + A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EED + ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE+ S ++ E H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L + S S +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWMNEED---------YEVSDDKSPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQDDESMETTGKDEDENSTGNKGEQTKNPDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKPPQQSSASQQM--------------------LNFPEKGKEK------PADMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLE 736 HSP 2 Score: 63.929 bits (154), Expect = 1.596e-9 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 947
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Mouse
Match: Smarcc1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:1203524]) HSP 1 Score: 557.37 bits (1435), Expect = 3.355e-178 Identity = 351/828 (42.39%), Postives = 476/828 (57.49%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEV--PSN----SLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFH-ADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAK 2489 ++KDG P +F+E+P+ ++ D+VR WL ++ KKY D TNK+LA L QLLQ+QE+ FGK + KLP CF DFK GG+L HI A KYK++QG RRFD Q+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++A+H ++P S +++ R VMR + +++HW PDS+D W+ + D + P + W++ +W+L T NEWM+EED+ + NRKP+ R+ + + + + + + S + R+K ASL R+S+ KE+D+ ED + P PN +EEV P N NTP +G + A DLDE+ + + +P+ S + +VTEQ + IIIPSY++WFDYN IHVIERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + A +GPP T HF+VL D+ +GL L ++ P V A + L N K+ + P + ++ L+TD Y +S + ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A + VDP YGLE +AG P + K Sbjct: 31 RRKDGGPASKFWESPDTVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSS-QEDEEWLRPVMRRDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDAPI------PEKPWKVHVKWILDTDVFNEWMNEEDYEV---------DENRKPVSFRQRISTKNEEPVRSPERRDRKASANSRKRKPSPSPPPPTA------------TESRKKSGKKGQASLYGKRRSQ-KEEDEQEDLTKDMEDPTP-VPN-IEEVVLPKNVNPKKDSENTPVKGGTVA-----------DLDEQDEEAVTTGGKEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMA--MGPPPTPHFNVLADTPSGLVPLHLRS---------------PQVPAAQQML------NFPEKNKEK------PIDLQNFGLRTDIYSKKTLAKS---KGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP-TYGLESSCIAGTGPDEPEK 771
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Mouse
Match: Smarcc1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:1203524]) HSP 1 Score: 557.755 bits (1436), Expect = 3.724e-178 Identity = 358/828 (43.24%), Postives = 484/828 (58.45%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEV--PSN----SLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFH-ADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAK 2489 ++KDG P +F+E+P+ ++ D+VR WL ++ KKY D TNK+LA L QLLQ+QE+ FGK + KLP CF DFK GG+L HI A KYK++QG RRFD Q+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++A+H ++P S +++ R VMR + +++HW PDS+D W+ + D + P + W++ +W+L T NEWM+EED+ + NRKP+ R+ + N S +++SA S K+ P+ + SGK+ + ASL R+S+ KE+D+ ED + P PN +EEV P N NTP +G + A DLDE+ + + +P+ S + +VTEQ + IIIPSY++WFDYN IHVIERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + A +GPP T HF+VL D+ +GL L ++ P V A + L N K+ + P + ++ L+TD Y +S + ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A + VDP YGLE +AG P + K Sbjct: 31 RRKDGGPASKFWESPDTVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSS-QEDEEWLRPVMRRDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDAPI------PEKPWKVHVKWILDTDVFNEWMNEEDYEV---------DENRKPVSFRQRISTK------NEEPVRSPERRDRKASANSRKRKPSPSPPPPTATESRKKSGKKGQ------ASLYGKRRSQ-KEEDEQEDLTKDMEDPTP-VPN-IEEVVLPKNVNPKKDSENTPVKGGTVA-----------DLDEQDEEAVTTGGKEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMA--MGPPPTPHFNVLADTPSGLVPLHLRS---------------PQVPAAQQML------NFPEKNKEK------PIDLQNFGLRTDIYSKKTLAKS---KGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP-TYGLESSCIAGTGPDEPEK 771
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Mouse
Match: Smarcc1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:1203524]) HSP 1 Score: 557.37 bits (1435), Expect = 6.921e-178 Identity = 356/828 (43.00%), Postives = 484/828 (58.45%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEV--PSN----SLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFH-ADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAK 2489 ++KDG P +F+E+P+ ++ D+VR WL ++ KKY D TNK+LA L QLLQ+QE+ FGK + KLP CF DFK GG+L HI A KYK++QG RRFD Q+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++A+H ++P S +++ R VMR + +++HW PDS+D W+ + D + P + W++ +W+L T NEWM+EED+ + NRKP+ R+ + + +P +++ A + + +K P P+ E R+K ASL R+S+ KE+D+ ED + P PN +EEV P N NTP +G + A DLDE+ + + +P+ S + +VTEQ + IIIPSY++WFDYN IHVIERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + A +GPP T HF+VL D+ +GL L ++ P V A + L N K+ + P + ++ L+TD Y +S + ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A + VDP YGLE +AG P + K Sbjct: 31 RRKDGGPASKFWESPDTVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSS-QEDEEWLRPVMRRDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDAPI------PEKPWKVHVKWILDTDVFNEWMNEEDYEV---------DENRKPVSFRQRIS--------TKNEEPVRSPERRDRKASANSRKRKPSPSPPPPTATE----SRKKSGKKGQASLYGKRRSQ-KEEDEQEDLTKDMEDPTP-VPN-IEEVVLPKNVNPKKDSENTPVKGGTVA-----------DLDEQDEEAVTTGGKEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMA--MGPPPTPHFNVLADTPSGLVPLHLRS---------------PQVPAAQQML------NFPEKNKEK------PIDLQNFGLRTDIYSKKTLAKS---KGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP-TYGLESSCIAGTGPDEPEK 771
BLAST of SWI/SNF complex subunit SMARCC2 vs. UniProt/SwissProt
Match: sp|Q8TAQ2|SMRC2_HUMAN (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1) HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0 Identity = 441/1030 (42.82%), Postives = 597/1030 (57.96%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDE------ETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG--KDPIDKAKEGDXXXX----XXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM N++++ ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE ET G + ++ N + H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L QP P+ S S +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG D ++ +E N E + K KE + +++ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWM---------NEEDYEVNDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDESMETTGK-DEDENSTGNKGEQTKNPDLHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPL------------------QPKT---PQQTSASQQMLNFPDKGKEK------PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 947
BLAST of SWI/SNF complex subunit SMARCC2 vs. UniProt/SwissProt
Match: sp|Q92922|SMRC1_HUMAN (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3) HSP 1 Score: 564.688 bits (1454), Expect = 7.505e-180 Identity = 361/830 (43.49%), Postives = 488/830 (58.80%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEV--PSN----SLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMS---VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAK 2489 ++KDG P +F+E+PE ++ D+VR WL ++ KKY D TNK+LA L QLLQ+QE+ FGK + KLP CF DFK GG+L HI A KYK++QG RRFD Q+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++A+H ++P +S +++ R VMR+ + +++HW PDS+D W+ + D + P + W++ +W+L T NEWM+EED+ + NRKP+ R+ + + +P +++ A + + +K P P+ E R+K ASL R+S+ KE+D+ ED + P PN +EEV P N NTP +G + A L + DEET +G + A D+S D+ VTEQ + IIIPSY++WFDYN IHVIERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + A +GPP T HF+VL D+ +GL L ++ P V A + L N K+ + P + ++ L+TD Y +S + ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A + VDP YGLE +AG P + K Sbjct: 32 RRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSS-QDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPI------PEKPWKVHVKWILDTDIFNEWMNEEDYEV---------DENRKPVSFRQRIS--------TKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTE----SRKKSGKKGQASLYGKRRSQ-KEEDEQEDLTKDMEDPTP-VPN-IEEVVLPKNVNLKKDSENTPVKGGTVAD--------LDEQDEETVTAGGKEDEDPAKG-----DQSRSVDLGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMA--MGPPPTPHFNVLADTPSGLVPLHLRS---------------PQVPAAQQML------NFPEKNKEK------PVDLQNFGLRTDIYSKKTLAKS---KGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP-TYGLESSCIAGTGPDEPEK 772
BLAST of SWI/SNF complex subunit SMARCC2 vs. UniProt/SwissProt
Match: sp|P97496|SMRC1_MOUSE (SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2) HSP 1 Score: 557.37 bits (1435), Expect = 4.841e-177 Identity = 356/828 (43.00%), Postives = 484/828 (58.45%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEV--PSN----SLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFH-ADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAK 2489 ++KDG P +F+E+P+ ++ D+VR WL ++ KKY D TNK+LA L QLLQ+QE+ FGK + KLP CF DFK GG+L HI A KYK++QG RRFD Q+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++A+H ++P S +++ R VMR + +++HW PDS+D W+ + D + P + W++ +W+L T NEWM+EED+ + NRKP+ R+ + + +P +++ A + + +K P P+ E R+K ASL R+S+ KE+D+ ED + P PN +EEV P N NTP +G + A DLDE+ + + +P+ S + +VTEQ + IIIPSY++WFDYN IHVIERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNLTGDVC+++RVHAFLEQWGL+NYQVD E + A +GPP T HF+VL D+ +GL L ++ P V A + L N K+ + P + ++ L+TD Y +S + ++ G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A + VDP YGLE +AG P + K Sbjct: 31 RRKDGGPASKFWESPDTVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSS-QEDEEWLRPVMRRDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDAPI------PEKPWKVHVKWILDTDVFNEWMNEEDYEV---------DENRKPVSFRQRIS--------TKNEEPVRSPERRDRKASANSRKRKPSPSPPPPTATE----SRKKSGKKGQASLYGKRRSQ-KEEDEQEDLTKDMEDPTP-VPN-IEEVVLPKNVNPKKDSENTPVKGGTVA-----------DLDEQDEEAVTTGGKEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMA--MGPPPTPHFNVLADTPSGLVPLHLRS---------------PQVPAAQQML------NFPEKNKEK------PIDLQNFGLRTDIYSKKTLAKS---KGASAG------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP-TYGLESSCIAGTGPDEPEK 771
BLAST of SWI/SNF complex subunit SMARCC2 vs. UniProt/SwissProt
Match: sp|Q6PDG5|SMRC2_MOUSE (SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2) HSP 1 Score: 393.275 bits (1009), Expect = 2.926e-115 Identity = 212/374 (56.68%), Postives = 254/374 (67.91%), Query Frame = 3 Query: 1350 FHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L + S S +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG Sbjct: 412 LHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKPPQQSSASQQM--------------------LNFPEKGKEK------PADMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAG 742 HSP 2 Score: 233.802 bits (595), Expect = 3.595e-61 Identity = 114/266 (42.86%), Postives = 165/266 (62.03%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ I E+ + A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EED+ Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDTFNEWMNEEDY 257 HSP 3 Score: 63.5438 bits (153), Expect = 1.219e-8 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 947
BLAST of SWI/SNF complex subunit SMARCC2 vs. UniProt/SwissProt
Match: sp|O14470|SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr2 PE=1 SV=3) HSP 1 Score: 241.506 bits (615), Expect = 7.288e-68 Identity = 146/382 (38.22%), Postives = 213/382 (55.76%), Query Frame = 3 Query: 1368 VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQ---ASVVKSQSNNSAI---DKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGG-------------VIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPY---LEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDP----RIASEAAKAAL-----NEFSRLKEEVPEYMVKE--HKAKVTTAVE 2414 + EQ + II+PSY+ WFD + IH IERR+ PEFF GK+ K+ +Y YR+FMI++YRL P EYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQ+D E + A L PP + H ++++ Q + Q S V S+ + +K + + N + ++ + +S ++ C + + Y N+ + + D+ N +D K WS+QETLLLLE +E Y DDWN++A HVGSRT+E+C+++FL++PIEDPY L+GD + + +PF ++ NP++ST+ +LAS V R +E+ K +EF E V Y +K KAK+ A E Sbjct: 11 LVEQTYPIIVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETR-PAFRL-PPISGHVQAISNTPIVTQEMLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCGV---NCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPYRQKLQGDFSPFKK---GFLPFDENENPVLSTLTYLASIVQQGMKERKQNESVKQGETSFGNSEFKNPLERVAYYALKSAAQKAKLIAAFE 384
BLAST of SWI/SNF complex subunit SMARCC2 vs. TrEMBL
Match: I1ZI88 (SWI/SNF complex subunit SMARCC-1 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 1083.94 bits (2802), Expect = 0.000e+0 Identity = 754/799 (94.37%), Postives = 764/799 (95.62%), Query Frame = 3 Query: 1398 PSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAY-RNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHXXXXXXXXXXXXXXXQHNTSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNMQTPQHQSNMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITQQYSXXXXXXXXXXXXAAYQNVGMSAAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 3791 P A FD ++ R +++ +N + +V Y N+ +L EYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDN E AKEEIKVAVKENIDSSTSVKSETDNKVETESHTESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMAPQHQQNLQPQHQPNMPPIQHQQQLPIPTQTPQNMSSSSSSQHQQNMHTQNITQQYSQGPLPPQTQQQQAAYQNVGMSAAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN Sbjct: 19 PEIIALFD--TVRTWLTRNCKKYW--QNDPMTNKVLQLYVTNYFSIKRKLLEDEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDNEEGAKEEIKVAVKENIDSSTSVKSETDNKVETESHTESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMAPQHQQNLQPQHQPNMPPIQHQQQLPIPTQTPQNMSSSSSSQHQQNMHTQNITQQYSQGPLPPQTQQQQAAYQNVGMSAAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 813 HSP 2 Score: 112.464 bits (280), Expect = 1.205e-26 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 3 Query: 21 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSL 170 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNK L Sbjct: 1 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKVL 50 HSP 3 Score: 39.6614 bits (91), Expect = 1.205e-26 Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 151 P*RTRVLQLYATNYFSIKRKLLE 219 P +VLQLY TNYFSIKRKLLE Sbjct: 44 PMTNKVLQLYVTNYFSIKRKLLE 66
BLAST of SWI/SNF complex subunit SMARCC2 vs. TrEMBL
Match: A0A5K3FU96 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0 Identity = 461/1089 (42.33%), Postives = 617/1089 (56.66%), Query Frame = 3 Query: 60 RFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLL------FPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSE------------------EDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXX------------PECPNRVEEV----PSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXX-XXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQV-------------DQEGKI-TAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-----------VNLQSKSADSNNETCMPS----------SISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAG----LPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPI--------PFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKD---SNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVV 3047 RFYENPEIIA FD VRTWLTRN KKY Q +P TNKSLA LCY LL +QE+ FGK N++ KLP F DFKPGGSL +IF CLKY+ DQG R+ DF SP R ++ +EMF I+ EL W P ++LS I + +++ + ++ + ++ EATH++ +P +S+ + R++ +EGRG+++HW+ +P S+DNW +N P + S EP P + W++D RWLL + E+ EWM E E+FL + Q+ QA S + + ++ + P++ D + SN NS KRR ++V + S K KED + KD + PE N+V +V P RN+ + A+A D+ N+ D G G + + D+SV EQAHCI++PSYSAWFDYN+IH IERR+LPEFF GKNKSK+ E Y+AYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCS+LRVHAFLEQWGLINYQV + ++ A SLGPP+T+HF+VLTDSA+GLQ LG+Q + A +Q P + + +D V L + + +PS S D L++DQY+ + + G D A W+DQETLLLLE LEMY+DDWNKVAEHVGSRTQ+ECIL+FLRLPIED YLEGD ++CY + PFSKSGNPI+STVAFLA+ VDPR+A+ AA AAL E+++++EEVP ++ EHKA+V AV G+ VDP K+GL+E + D K G + +E + A K DS +VKS+ ++ +E + E +P V E E + +E ++ K + E + N L AA+ ALAA+ATKAR+LA EEK+IKGLVAQLVE QLKK+++KLKQFQELEAI+ERE+E+LEQ RQQL+ DRQAFHME++KT+E++AR + Sbjct: 14 RFYENPEIIANFDPVRTWLTRNHKKYTQAEPPTNKSLAGLCYNLLIFQEQYFGK--NDMP-TKLPSRLFVDFKPGGSLCYIFLVCLKYRHDQGWRKLDFGSP-RIDKFLEMFDCIRRELAHQHLWSNPCLFLS-GIEEPLLGRVQESILRLGASVAKSPEEATHIIHNPPESWPGDSREDSSCPRFRLIFKEGRGLLIHWLYSPGSYDNWHTNFPVEWPSSIEP--EPRVPGGTPWDVDARWLLYSAEHREWMLEEDFLHNSSSARPRKSYTYEEFLEAASSQQ--TQAPASSWTSSFSASSLSASPHISSTGAPTTPTDLSHKKKRKRSPSPSSESYVGGNSNLSANSKKRRHGSLVPSNSKHGASKKIKKEDYMELTPEDQKDDNTNDTNDLTRNLDDPEPSNKVTQVAPGTPVTMTSRNSRTSLATADLTGDHMNSPAAPTDHTGGGEGESVDVGGGRGSGGGGGGDQMGGDLSVIEQAHCIVMPSYSAWFDYNAIHAIERRSLPEFFNGKNKSKTPETYLAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSVLRVHAFLEQWGLINYQVAAPLLSTGASQMPSEAARLAVAASLGPPSTAHFNVLTDSASGLQPLGSQNQAAMAALAEEAAKQQ---KEQPIESTKTDGDGEVKSGIKPEVGLDGQPSTGQLGQMLPSATPTLGGPPPSTGDPLLRSDQYLTAGNTGGSDAAATGGAAGDIATNQILTKGAMKDGWTDQETLLLLEALEMYRDDWNKVAEHVGSRTQDECILHFLRLPIEDAYLEGDFGSTASVCYSALADASHPQPPFSKSGNPILSTVAFLAAVVDPRVAASAASAALKEYAQMREEVPAGLLHEHKARVEAAVRMGREVDPTKFGLDELGIVKPDESKKTTAGGDEHVKEESSEAAEKSVEDSGDAVKSQMSSEDGKSEGAVAEK-----AHEERPKVGEAPEKERTQSEEVLEAKRKRDAGEKTPAPTNCLPPNPDSLGTAAACALAAAATKARHLASVEEKRIKGLVAQLVETQLKKLDIKLKQFQELEAILEREHEMLEQARQQLMHDRQAFHMEVIKTMENQARAL 1085
BLAST of SWI/SNF complex subunit SMARCC2 vs. TrEMBL
Match: A0A5E4ASX4 (Uncharacterized protein OS=Marmota monax OX=9995 GN=MONAX_5E017551 PE=4 SV=1) HSP 1 Score: 647.121 bits (1668), Expect = 0.000e+0 Identity = 439/1036 (42.37%), Postives = 601/1036 (58.01%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDE-ETQGSGXXXXXXXXXXXXXXXDESFHADM---SVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQ--ASVVKSQSNNSAIDKQPTVTANPKDLSNSDN--VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG-----KDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EED+ + ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE E +G + N +++ + D+ +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q A + D P +LS++ +N K + P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG + I+++ + E + + + V+ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDSFNEWMNEEDYEV---------NDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDEGMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELSSASQQMLNFPDKGKEK------PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGTDEARAEGQATDEKKEPKEPREGGVVEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDSEKEKEPKEGQEEILKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 976
BLAST of SWI/SNF complex subunit SMARCC2 vs. TrEMBL
Match: A0A5E4AUD5 (Uncharacterized protein OS=Marmota monax OX=9995 GN=MONAX_5E017551 PE=4 SV=1) HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0 Identity = 440/1033 (42.59%), Postives = 598/1033 (57.89%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDE-ETQGSGXXXXXXXXXXXXXXXDESFHADM---SVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQASV-VKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG-----KDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDS------SENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EED+ + ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE E +G + N +++ + D+ +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q K+ +D TA K S D E P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG + I+++ + E + + + V+ E K + E + DS S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDSFNEWMNEEDYEV---------NDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDEGMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQSSASQQMLNFPDKGKEK--PTDMQNFGLRTDMY-----TKKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGTDEARAEGQATDEKKEPKEPREGGVVEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDSEKEKEPKEGQEEILKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 977
BLAST of SWI/SNF complex subunit SMARCC2 vs. TrEMBL
Match: A0A5E4AVC8 (Uncharacterized protein OS=Marmota monax OX=9995 GN=MONAX_5E017551 PE=4 SV=1) HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0 Identity = 443/1033 (42.88%), Postives = 602/1033 (58.28%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDE-ETQGSGXXXXXXXXXXXXXXXDESFHADM---SVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSL------GNQASV-VKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG----------KDPIDKAK-EGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKI-FDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 + ++KKDG PN ++YE + + FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FGK + + KLPI CF DFK GGSL HI +A K+KSDQG RR+DFQ+PSR +RNVEMFM I+ L + C +P ++L P I + + KL+ ++ + E+ N A+H+++P L ++ R VM+ + ++LHW PDS+D WI S I + +P P + ++ +W+L T NEWM+EED+ + ++ P+ RK + L +N P S + K S + + +K+N + S + + +++ ED D P PN VEEV +L + ++ S + + + + DLDE E +G + N +++ + D+ +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ +GL L G Q K+ +D TA K S D E P+ + ++ L+TD Y + +V S + ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAK+AL EFS++KEEVP +V+ H KV A + DP +GLE +AG + D+A+ EG +E KE + ++ K+ K + E E + + + S+ P V E E + + EE+ ++ + +E E K ++D L+ AA+ ALAA+A KA++LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGN-LEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP--------EKPRKVHAKWILDTDSFNEWMNEEDYEV---------NDDKNPVSRRKKISAKTLTDEVN---SPDS----------DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSP-VPN-VEEV---TLPKTVNTKKDSESAPV--KGGTMTDLDEQEDEGMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP--MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQSSASQQMLNFPDKGKEK--PTDMQNFGLRTDMYT-----KKNVPSKSKAAA--------SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP-AFGLESSGIAGTTSDEPERIEESGTDEARAEGQATDEKKEPKEPREGGVVEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDSEKEKEPKEGQEEILKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 977
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Cavefish
Match: smarcc2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]) HSP 1 Score: 396.356 bits (1017), Expect = 1.116e-118 Identity = 212/368 (57.61%), Postives = 253/368 (68.75%), Query Frame = 3 Query: 1350 FHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLE 2453 H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+RVHAFLEQWGLINYQVD E + T +GPP TSHFHVL D+ + L L +AS ++ S+ + TV P DL N + L+TD Y + + N S ++EW++QETLLLLEGLEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE ++ + L YQP+PFS++GNP+MSTVAFLAS VDPR+AS AAK+AL EFSR+KEEVP +V+ H +V A DP YGLE Sbjct: 408 LHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTP--MGPPPTSHFHVLADTPSSLVPLQPKAS--QTPSSQQMLSFPDTVKDKPTDLQN-------------------------FGLRTDMYSKKSGSAKGKNAASA-------------TREWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSTLGPLAYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARVSGRPDP-LYGLE 731 HSP 2 Score: 224.557 bits (571), Expect = 1.346e-59 Identity = 110/287 (38.33%), Postives = 172/287 (59.93%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKC 884 + ++KKDG PN +++E + ++ FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FG+ + + KLP+ F DFK GG+L HI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P+++LS I + + KL+ ++ + E+ ++H++ P + L +++ R VM+ + ++LHW PDS+D WIS + + P+ + ++ +W+L + NEWM+EED+ E + R+ IS K Sbjct: 1 MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGRHVSNPPLTKLPMKSFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNNCLARPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKPSSSHVVVPIPAS-LEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAVVEDAPS------PEKPRKVHAKWILDLDQYNEWMNEEDY-------EVGEGGTRRKRISAKT 273
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Cavefish
Match: smarcc1a (SWI/SNF complex subunit SMARCC1 [Source:NCBI gene;Acc:103036726]) HSP 1 Score: 366.696 bits (940), Expect = 2.120e-107 Identity = 218/427 (51.05%), Postives = 267/427 (62.53%), Query Frame = 3 Query: 1203 NTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHA-DMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDP 2474 N P +G + A DLDE+ GS + + + + + +VTEQ H IIIPSYSAWFDYNSIH IERRALPEFF GKNKSKS E+Y+AYRNFMIDTYRLNPQEYLT T+CRRNLTGDVC+++RVHAFLEQWGLINYQVD E + T HF+VL D+ +GL L ++ V +N K D P+ + ++ L+TD Y S +S + S ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+A+ AAKAAL EFSR++EEVP +V+ H KV A + VDP +GLE +AG P Sbjct: 399 NAPVKGGTVA-----------DLDEQENGSVASGGKDDEDQAKAEVNRLIDSGEDNVTEQTHHIIIPSYSAWFDYNSIHEIERRALPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPP--PTPHFNVLADTPSGLVPLHHRPPQVPPAQQM---------------------LNFPEKGKDK------PTDLQNFGLRTDMY----SKKSTKGKGSG-------------TREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLESSEATLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVREEVPAELVEAHVKKVQEAARNTGKVDP-AFGLESSGIAGTAP 767 HSP 2 Score: 207.608 bits (527), Expect = 5.267e-54 Identity = 99/268 (36.94%), Postives = 162/268 (60.45%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQ 836 +KKDG P +F+E+ E +A + VR W++++ KK+ Q D + K+LA L QLLQ+QE+ FG+ + ++ KLP F DFKP G+L HI + K+KS+QG RRFD Q+PSR +RNVEMFM I+ L + C +P+V+++ + + KL+ ++ I ++ ++ATH + P S+ +++ R VMR+ + +++HW PDS+D W+ D + P S + W + +W+L T NEWM+EED+ + N++ Sbjct: 34 RKKDGGPAGKFWESGETVAQLEAVRQWISKHYKKHVQADSPSCKTLAGLVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPAGALCHILGSAYKFKSEQGWRRFDLQNPSRMDRNVEMFMNIEKTLAQNNCLTRPVVYIASDVDQKQASKLKDIIKRHQGSITDDKSKATHHICPSPSQP-EDEEWLRPVMRKDKQVLVHWGSYPDSYDTWVPVSDVDAEIEDPP------NSEKPWRVHAKWVLDTDAFNEWMNEEDYEVDENRK 294
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Cavefish
Match: smarcc1a (SWI/SNF complex subunit SMARCC1 [Source:NCBI gene;Acc:103036726]) HSP 1 Score: 366.696 bits (940), Expect = 3.145e-107 Identity = 218/427 (51.05%), Postives = 268/427 (62.76%), Query Frame = 3 Query: 1203 NTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHA-DMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDP 2474 N P +G + A DLDE+ GS + + + + + +VTEQ H IIIPSYSAWFDYNSIH IERRALPEFF GKNKSKS E+Y+AYRNFMIDTYRLNPQEYLT T+CRRNLTGDVC+++RVHAFLEQWGLINYQVD E + T HF+VL D+ +GL L ++ P+ +N K D P+ + ++ L+TD Y S +S + S ++EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+A+ AAKAAL EFSR++EEVP +V+ H KV A + VDP +GLE +AG P Sbjct: 399 NAPVKGGTVA-----------DLDEQENGSVASGGKDDEDQAKAEVNRLIDSGEDNVTEQTHHIIIPSYSAWFDYNSIHEIERRALPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPP--PTPHFNVLADTPSGLVPLHHRP---------------------PQVPPAQQMLNFPEKGKDK------PTDLQNFGLRTDMY----SKKSTKGKGSG-------------TREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLESSEATLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVREEVPAELVEAHVKKVQEAARNTGKVDP-AFGLESSGIAGTAP 767 HSP 2 Score: 207.223 bits (526), Expect = 7.391e-54 Identity = 99/268 (36.94%), Postives = 162/268 (60.45%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQ 836 +KKDG P +F+E+ E +A + VR W++++ KK+ Q D + K+LA L QLLQ+QE+ FG+ + ++ KLP F DFKP G+L HI + K+KS+QG RRFD Q+PSR +RNVEMFM I+ L + C +P+V+++ + + KL+ ++ I ++ ++ATH + P S+ +++ R VMR+ + +++HW PDS+D W+ D + P S + W + +W+L T NEWM+EED+ + N++ Sbjct: 34 RKKDGGPAGKFWESGETVAQLEAVRQWISKHYKKHVQADSPSCKTLAGLVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPAGALCHILGSAYKFKSEQGWRRFDLQNPSRMDRNVEMFMNIEKTLAQNNCLTRPVVYIASDVDQKQASKLKDIIKRHQGSITDDKSKATHHICPSPSQP-EDEEWLRPVMRKDKQVLVHWGSYPDSYDTWVPVSDVDAEIEDPP------NSEKPWRVHAKWVLDTDAFNEWMNEEDYEVDENRK 294
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Cavefish
Match: smarcc1b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-273]) HSP 1 Score: 341.273 bits (874), Expect = 1.500e-100 Identity = 215/436 (49.31%), Postives = 267/436 (61.24%), Query Frame = 3 Query: 1197 GRNTPSRGASAAGNIDNRNNVLYDL-DEETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDN-VNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG--KDPIDKA 2486 G NTP +G + A D + + + DEE QG ++ S TEQ H IIIPSY++WFDYN IH IERRALPEFF GKNKSKS E+++AYRNF+IDTYRLNPQEYLT T+CRRNLTGDVC+++RVHAFLEQWGLINYQVD E + T HF+VLTDS + L L ++ P +S S + ++ KS + PS + ++ L+TD Y A S G +EW++QETLLLLE LEMYKDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EE P + K S +DP +GL+ V+G DP++K+ Sbjct: 306 GENTPVKGGTMADLDDQEDEFMSGVRDEEDQGR--------------EFGRGLDSEESATEQTHHIIIPSYTSWFDYNCIHRIERRALPEFFNGKNKSKSPEIFLAYRNFIIDTYRLNPQEYLTSTSCRRNLTGDVCALIRVHAFLEQWGLINYQVDAESRPLPMGPP--PTPHFNVLTDSPSALVPLQHR----------------------PLQVSASQHMLHFPEKSREK------PSDLQNFGLRTDIY---ARKHPKTKGASAG-------------REWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSEASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEAPPELF---NPKAPEPGRSLPRLDP-PFGLQSSNVSGPDSDPLEKS 677 HSP 2 Score: 149.058 bits (375), Expect = 4.215e-36 Identity = 86/266 (32.33%), Postives = 138/266 (51.88%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLA---TLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNW--ISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 ++K G P+ F+E PE A + VR+W+ ++ KK T S+ +C + + G + + ++ L CFFD KPGG+L HI + K+K++QG RRFD Q+PSR +RNVEMF+ ++ L+ + +P+V+LSP + + KL I V + L V ++ R VMR + +M+HW PDS+D +S++ ++ P P RP W++ +W+L T NEWM+EED+ Sbjct: 16 RRKSGGPSAPFWEGPETAAQLEAVRSWIGKHYKKVRSGGRATANSVCNSVCICVCFV-----SAGTVCVSVCVLYLQAKCFFDMKPGGALCHILGSVYKFKTEQGWRRFDLQNPSRVDRNVEMFVSVEKTLKQNNLLSRPVVYLSPDLDQKQASKLEDI---ITRHQVRRSQFVICLCL-----VCFAEEWFRPVMRVDQDVMVHWGMYPDSYDTLVPVSDVDAEVEEPPTPD-RP-------WKVHVKWVLDTDMFNEWMNEEDY 260 HSP 3 Score: 60.077 bits (144), Expect = 1.561e-8 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LEQQRQQLL +RQ FH+E +K E +AR Sbjct: 740 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQVKYAEIKAR 812
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Cavefish
Match: mysm1 (Myb like, SWIRM and MPN domains 1 [Source:NCBI gene;Acc:103027263]) HSP 1 Score: 61.6178 bits (148), Expect = 5.636e-9 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 1443 ERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNL--TGDVCSILRVHAFLEQWGLINYQVDQ 1667 E++A+PEFF G+ SK+ E Y+ RN+++D + + +YL T+ R L GDV I R+H +LE G IN+ DQ Sbjct: 345 EKQAIPEFFEGR-PSKTPERYLKIRNYILDQWEKSKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFNCDQ 420
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006171.1 (pep scaffold:Pmarinus_7.0:GL479547:361:13194:1 gene:ENSPMAG00000005491.1 transcript:ENSPMAT00000006171.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 375.555 bits (963), Expect = 2.289e-111 Identity = 211/381 (55.38%), Postives = 260/381 (68.24%), Query Frame = 3 Query: 1368 VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLE---GDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAGKDPIDKAKEG 2495 VT+Q H I++PSY+AWFDYNSIH IERRALPEFF GKNKSK+ EVY+AYRNFMIDTYRLNPQEYLT TACRRNL GDVC+I+R HAFLEQWGLINYQVD + + A +GPP TSHFHVL D+ +GL L + + V S QPT +NSD K+ + E + ++ L++D Y + +G +++W+DQETLLLLEGLEM+KDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE G + + L YQP+PFS+ GNP+MSTVAFLAS VDPR+A+ AAKAAL+EF ++KEEVP +V+ H KV A +S DP +GLE +AG P + K G Sbjct: 415 VTDQMHHIVVPSYAAWFDYNSIHAIERRALPEFFNGKNKSKTPEVYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRAHAFLEQWGLINYQVDTDSRPAA--MGPPPTSHFHVLVDTPSGLVPLQPKTTPVASV--------QPTP-------NNSD------KAKEKTGE------LQNFGLRSDMYAKKDGTSAKSKIAGSG------------ARDWTDQETLLLLEGLEMFKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEEGVGSLSSLGPLAYQPVPFSQVGNPVMSTVAFLASVVDPRVATAAAKAALDEFQKMKEEVPSALVETHVKKVEEAAKSSGKADPS-FGLESSGIAGTAPEQQEKIG 753 HSP 2 Score: 224.172 bits (570), Expect = 5.120e-60 Identity = 110/261 (42.15%), Postives = 159/261 (60.92%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 +KKDG PN +F E+ + +A FD VR WL ++ KKY Q +P TNKSLA L QLLQ+QEE GK + + ++P+ CF DFK GGSL I +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P ++L P I + KL+ ++ + ++ + A+H++FP + D+ R VM++ R ++LHW PDS+D W+ D + P N W++ +W+L T NEWM+EED+ Sbjct: 4 RKKDGGPNVKFLESTDTVAQFDNVRQWLGKHYKKYIQAEPPTNKSLAGLVIQLLQFQEEVMGKHVSNPPLTRIPMKCFMDFKAGGSLCQILAAVYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKLLVQNNCLSRPNIYLHPDIDHKLASKLKDIVKRHQGSLTDDKSNASHVVFPLPAN-HDEDEWVRPVMKKDRQMLLHWGFYPDSYDTWLMANEVDAEVEDMPP------RNGPWKVHVKWILDTDTFNEWMNEEDY 257 HSP 3 Score: 67.3958 bits (163), Expect = 2.125e-11 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE+I++RE E LE QRQQLL DRQAFHME LK E RAR Sbjct: 907 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELESIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR 979
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007866.1 (pep scaffold:Pmarinus_7.0:GL477456:337314:352717:-1 gene:ENSPMAG00000007110.1 transcript:ENSPMAT00000007866.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 143.28 bits (360), Expect = 6.375e-37 Identity = 70/97 (72.16%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 2076 GLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVP 2366 L++Y DDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A M L YQP+PFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFS + +P Sbjct: 11 ALDLYTDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEESEASMGPLAYQPVPFSRSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSHRRVLLP 107 HSP 2 Score: 59.6918 bits (143), Expect = 2.541e-9 Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 3 Query: 2838 EEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL DR FH+E +K E RAR Sbjct: 324 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERESLEYQRQQLLSDRSTFHLEQIKLAELRAR 391
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001387.1 (pep scaffold:Pmarinus_7.0:GL477098:21548:26970:1 gene:ENSPMAG00000001246.1 transcript:ENSPMAT00000001387.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.8398 bits (133), Expect = 2.841e-8 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 1443 ERRALPEFFIGKNKSKSAEVYMAYRNFMIDTY-RLNPQEYLTFTACRRNLT--GDVCSILRVHAFLEQWGLINY 1655 ERRA EFF G+ SK+ E Y+ RN++++ + R+ P+ YL TA R L GDV I RVH LE G IN+ Sbjct: 246 ERRASEEFFQGR-PSKTPERYLKIRNYIVEEWERIRPR-YLNKTAVRSGLKNCGDVNCIGRVHTALELLGAINF 317
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001389.1 (pep scaffold:Pmarinus_7.0:GL477098:21548:25278:1 gene:ENSPMAG00000001246.1 transcript:ENSPMAT00000001389.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.4546 bits (132), Expect = 3.648e-8 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 1443 ERRALPEFFIGKNKSKSAEVYMAYRNFMIDTY-RLNPQEYLTFTACRRNLT--GDVCSILRVHAFLEQWGLINY 1655 ERRA EFF G+ SK+ E Y+ RN++++ + R+ P+ YL TA R L GDV I RVH LE G IN+ Sbjct: 264 ERRASEEFFQGR-PSKTPERYLKIRNYIVEEWERIRPR-YLNKTAVRSGLKNCGDVNCIGRVHTALELLGAINF 335
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001385.1 (pep scaffold:Pmarinus_7.0:GL477098:15783:25278:1 gene:ENSPMAG00000001246.1 transcript:ENSPMAT00000001385.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.8398 bits (133), Expect = 4.220e-8 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 1443 ERRALPEFFIGKNKSKSAEVYMAYRNFMIDTY-RLNPQEYLTFTACRRNLT--GDVCSILRVHAFLEQWGLINY 1655 ERRA EFF G+ SK+ E Y+ RN++++ + R+ P+ YL TA R L GDV I RVH LE G IN+ Sbjct: 333 ERRASEEFFQGR-PSKTPERYLKIRNYIVEEWERIRPR-YLNKTAVRSGLKNCGDVNCIGRVHTALELLGAINF 404
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Yeast
Match: SWI3 (Subunit of the SWI/SNF chromatin remodeling complex; SWI/SNF regulates transcription by remodeling chromosomes; contains SANT domain that is required for SWI/SNF assembly; is essential for displacement of histone H2A-H2B dimers during ATP-dependent remodeling; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; relocates to the cytosol under hypoxic conditions [Source:SGD;Acc:S000003712]) HSP 1 Score: 222.246 bits (565), Expect = 1.622e-60 Identity = 131/370 (35.41%), Postives = 193/370 (52.16%), Query Frame = 3 Query: 1377 QAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVV--------KSQSNNSAIDKQPTV-------------TANPKDLSNSDNVNLQSKSADSNNETCMPSSIS-DYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDA-------ALMETLCYQP-IPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRL---KEEVPEYMVKEH 2387 QAH I+IPSYS WF+ IH IE ++LPEFF + SK+ EVYM YRNFM+++YRLNP EY + T RRN++GD ++ R+H FL +WGLINYQVD K+ ++ PP TS + D+ GL + V K N S D + T+ +P ++ +N + NNE +S++ D +L + E T + L + WS ++ LL+G++ + DW KVA++VG+++ E+CIL FL+LPIED +L GD + L Y P +PFSKS NP++ST+AFL V+P+ + A+ + KEE+ + EH Sbjct: 301 QAHEIVIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSGDAAALFRLHKFLTKWGLINYQVD--SKLLPKNIEPPLTSQYSTRHDAPRGLFPFESYKPSVQLPDMAKLKKMMNTS--DSESTLYKYLKESKRKYDEITHPPSTTDDENGDKNDNGGKMNNEVSTSTSMTGDANL--------------LEEGETSRPLKKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPEQCILRFLQLPIEDKFLYGDGNGKGDNDNGLGPLKYAPHLPFSKSENPVLSTIAFLVGLVNPKTVQSMTQRAIQSAESIKSQKEEISDQKPIEH 652
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Yeast
Match: RSC8 (Component of the RSC chromatin remodeling complex; essential for viability and mitotic growth; homolog of SWI/SNF subunit Swi3p, but unlike Swi3p, does not activate transcription of reporters [Source:SGD;Acc:S000001933]) HSP 1 Score: 195.282 bits (495), Expect = 2.100e-53 Identity = 118/314 (37.58%), Postives = 169/314 (53.82%), Query Frame = 3 Query: 1368 VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTAN-PKDLSNSDNV--------NLQSKSADSNN-------ETCMPSSIS-----------------------DYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQ-EECILYFLRLPIEDPYL 2189 + +Q H +IIPS+++WFD + IH IE+R+ P+FF ++ K+ + Y RNF+I+TYRL+P EYLT TA RRN+ DV SI+++HAFLE+WGLINYQ+D K + +GP T HF V+ D+ GL+ + +V+K Q +P V P +L+ NV LQ +S +S TC SI+ + Q+ +I + +N + V +N WSDQE LLLLEG+EMY+D W K+A+HVG + E+CI FL LPIED Y+ Sbjct: 73 LAKQTHPVIIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSL--IGPSFTGHFQVVLDTPQGLKPFLPE-NVIK-QEVEGGDGAEPQVKKEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENNGNSVKKN------------------WSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYI 364
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Nematostella
Match: EDO49454 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGR1]) HSP 1 Score: 377.481 bits (968), Expect = 5.162e-113 Identity = 190/352 (53.98%), Postives = 241/352 (68.47%), Query Frame = 3 Query: 1359 DMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNET--CMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTA 2408 D ++TEQ H I+IPSY++W+DYNSIH IERRALPEFF G+N+SK+ E+Y+A RNFMID YRLNP EYLT TACRRNL GDVC+I+R+HAFLEQWGLINYQVD + + +GPP TSHFHV+ D+ GLQ L PK + + +Q K ET PSS +++ L TDQY++ S ++ +KEW+DQETLLLLEG+E++KDDWNKVAEHVG+RTQ+ECIL+FLRLPIEDP+LE + L +QP+PFS+ GNPIMSTVAFLAS VDPR+AS AAKAAL EFS++++E+PE ++ H T+A Sbjct: 423 DENLTEQTHHIVIPSYASWYDYNSIHAIERRALPEFFNGQNRSKTPEIYLAMRNFMIDAYRLNPTEYLTATACRRNLAGDVCAIVRIHAFLEQWGLINYQVDADSR--PAPMGPPATSHFHVMADTPAGLQPL-----------------------QLPKSMISPSQQMMQFKDEHGLRETPKSQPSS-TNFGLHTDQYLSKKSQKAATA-----------------TKEWTDQETLLLLEGMELFKDDWNKVAEHVGTRTQDECILHFLRLPIEDPFLED--MKLGPLTFQPVPFSQQGNPIMSTVAFLASVVDPRVASAAAKAALEEFSKMRDEIPEAIIDSHVKSATSA 729 HSP 2 Score: 193.741 bits (491), Expect = 2.469e-50 Identity = 113/295 (38.31%), Postives = 166/295 (56.27%), Query Frame = 3 Query: 24 LFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNV 908 + ++KKDG P+ ++YE E ALF+ V+ +L +N KKY Q +P TNK LATL QLLQ+QE+ FG + + KLPI F D+ G L I + K ++DQG RRFDFQSPSR +RNVEMF+ I+ ++ K P V+++ + V KLR ++ + IV++ ATH++ L +D R + + +++HW PDS+D W +PS L EP P WE+ RWL + NEWM+EED+ + G E A +A RK R + D++N+ Sbjct: 1 MAVRKKDGGPDWKYYETSEAAALFEPVKQYLLKNHKKYVQVEPPTNKGLATLVAQLLQFQEDNFGHTVAKPPLTKLPIKLFQDYSANGGLCTILACVYKTRTDQGWRRFDFQSPSRIDRNVEMFLNIERAVKEAKLLMIPQVYIAQDVDQSQVAKLRDIVKRHNGNIVDDKTSATHIVH-ACPPPLPEEDWLRPLKKNEGQVLVHWWYYPDSYDTW---VPSTDVLD-EPQPEP--DHKGPWEVTGRWLTDLEKYNEWMNEEDYEI-GVDGE-ASRARRKSFRGRA--SSDEVNM 284 HSP 3 Score: 63.5438 bits (153), Expect = 4.965e-10 Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 2832 QSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQ--AISQNPSV 3137 Q EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LE QRQQLL +RQ FH E L+ E RAR + P + + HNA Q A+ Q P Sbjct: 857 QVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAERQQFHQEQLRAAELRARASHMSPSTPTSTV------HNAPQAHAVPQQPGT 954
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Medaka
Match: ENSORLT00000019896.2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:NCBI gene;Acc:101157086]) HSP 1 Score: 365.54 bits (937), Expect = 9.645e-107 Identity = 209/368 (56.79%), Postives = 246/368 (66.85%), Query Frame = 3 Query: 1368 VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEE--VAG 2465 VTEQ H IIIPSY AWFDYNSIH IERRALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYLT T+CRRNLTGDVC+I+RVHAFLEQWGL+NYQVD E + T HF VL D+ +GL L ++ + Q QP N KS D P + ++ L+ D Y S N S G+ +++W++QETLLLLE LEM+KDDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE A + L YQPIPFS+SGNP+MSTVAFLAS VDPR+AS AAKAAL EFSR++EEVP +V+ H KV A S VDP +GLE +AG Sbjct: 450 VTEQTHHIIIPSYGAWFDYNSIHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDSESRPLPMGPP--PTPHFTVLADTPSGLMPLNHRPPTIPPQ--------QPMP-------------NFADKSKDK------PIDLQNFGLRADLY-------SKKNTKSKAGIA---------TRDWTEQETLLLLEALEMFKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENTEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPAELVEAHVKKVQEAARSTGKVDP-TFGLESSGIAG 771 HSP 2 Score: 224.557 bits (571), Expect = 2.206e-59 Identity = 108/283 (38.16%), Postives = 173/283 (61.13%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRK 881 +KKDG P+ +F+E+ E ++ ++VR W+ ++ KKY QND ++KSLA L QLLQ+QE+ FG+ N ++ KLP CF DFK GG+L HI + K+KS+QG RRFD Q+PSR +RNVEMF+ ++ L + C +PIV+LSP + + KL+ ++ I E+ ++ATH ++P + ++ R V+R+ + +++HW PDS+D W+S D + P ++ W++ +W+L T NEWM+EED+ + N+KP+ SR+ Sbjct: 59 RKKDGGPSTKFWESSETVSQLESVRLWIGKHYKKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFMDFKAGGALCHILGSVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPIVFLSPDVEPKQASKLKDIIKRHQGSITEDKSKATHHIYPSPGQ-QEEEEWLRPVIRKDKQVLVHWGLYPDSYDTWVSAGEVDADVEDPP------NGDKPWKVHAKWVLDTDAFNEWMNEEDYEV---------DENKKPVNSRQ 325
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Medaka
Match: smarcc1b (SWI/SNF complex subunit SMARCC1 [Source:NCBI gene;Acc:101164905]) HSP 1 Score: 313.153 bits (801), Expect = 9.089e-90 Identity = 179/331 (54.08%), Postives = 222/331 (67.07%), Query Frame = 3 Query: 1368 VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEE 2360 + EQ H IIIPSY++WF+ NSIH IE+RALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYL+ T CRRNLTGDVCS++RVHAFLEQWGLINYQVD E + T HF+VL D+ +GL L ++ P +S S ++ + + C ++ L+TD Y N AG +EW++QETLLLLE LE+Y+DDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE ++ + L YQP+PFS+S NP+MSTVAFLAS VDPR+AS AAKAAL EFS+++EE Sbjct: 409 IVEQTHHIIIPSYTSWFNNNSIHSIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLSSTTCRRNLTGDVCSLIRVHAFLEQWGLINYQVDAESRPLPMGPP--PTPHFNVLADTPSGLAPLQHK----------------------PLQVSASQHMLYFPERGREKSTDC-----QNFGLRTDVYARKHPKAKGAN-----------AG-----REWTEQETLLLLEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQPVPFSQSENPVMSTVAFLASVVDPRVASAAAKAALEEFSKVQEE 694 HSP 2 Score: 191.045 bits (484), Expect = 4.527e-49 Identity = 99/263 (37.64%), Postives = 150/263 (57.03%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLL 821 +KK+ P+ F+++P+ ++ + VR W+ R+ KKY D + +SLA L QLLQ+QE+ FG+ + ++ KLP HCF D +PGG LSHI K+K +QG RRFD Q+PSRTERN+EMF I+ L + C P+V L ++ + +L + I E+ A+H + ++ + D+ R VMR I +HW PDS+D W+S+ SD E + ++ + W + WLL T NEWM+EED+ L Sbjct: 23 RKKECSPSAWFWDSPDTLSQLELVRQWIGRHYKKYVVVDAPSCQSLAALTMQLLQFQEDAFGRHASNPALTKLPAHCFVDLRPGGGLSHILGTAYKFKVEQGWRRFDLQNPSRTERNIEMFAVIEKTLLQNNCISLPVVCLDSSLDPDLTSRLSAIILRHQGSITEDRAMASHHVC-ASAAPIDEDEWMRPVMRRDNHIQVHWGMHPDSYDRWLSS--SDV----EGDVEELLHIQRPWRVHAGWLLDTDVFNEWMNEEDYCL 278 HSP 3 Score: 60.077 bits (144), Expect = 1.743e-8 Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LEQQRQQLL +RQ FH E LK E + R Sbjct: 809 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQTFHTEQLKQAELKVR 881
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Medaka
Match: smarcc1b (SWI/SNF complex subunit SMARCC1 [Source:NCBI gene;Acc:101164905]) HSP 1 Score: 300.442 bits (768), Expect = 5.375e-86 Identity = 174/323 (53.87%), Postives = 214/323 (66.25%), Query Frame = 3 Query: 1368 VTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALN 2336 + EQ H IIIPSY++WF+ NSIH IE+RALPEFF GKNKSK+ E+Y+AYRNFMIDTYRLNPQEYL+ T CRRNLTGDVCS++RVHAFLEQWGLINYQVD E + T HF+VL D+ +GL L ++ P +S S ++ + + C ++ L+TD Y N AG +EW++QETLLLLE LE+Y+DDWNKV+EHVGSRTQ+ECIL+FLRLPIEDPYLE ++ + L YQP+PFS+S NP+MSTVAFLAS VDPR+AS AAKAAL Sbjct: 413 IVEQTHHIIIPSYTSWFNNNSIHSIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLSSTTCRRNLTGDVCSLIRVHAFLEQWGLINYQVDAESRPLPMGPP--PTPHFNVLADTPSGLAPLQHK----------------------PLQVSASQHMLYFPERGREKSTDC-----QNFGLRTDVYARKHPKAKGAN-----------AG-----REWTEQETLLLLEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQPVPFSQSENPVMSTVAFLASVVDPRVASAAAKAALG 690 HSP 2 Score: 188.734 bits (478), Expect = 1.298e-48 Identity = 99/263 (37.64%), Postives = 149/263 (56.65%), Query Frame = 3 Query: 33 KKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLL 821 +KK+ P+ F+++P+ ++ + VR W+ R+ KKY D + +SLA L QLLQ+QE+ FG+ + ++ KLP HCF D +PGG LSHI K+K +QG RRFD Q+PSRTERN+EMF I+ L + C P+V L ++ + +L + I E+ A+H + + + D+ R VMR I +HW PDS+D W+S+ SD E + ++ + W + WLL T NEWM+EED+ L Sbjct: 27 RKKECSPSAWFWDSPDTLSQLELVRQWIGRHYKKYVVVDAPSCQSLAALTMQLLQFQEDAFGRHASNPALTKLPAHCFVDLRPGGGLSHILGTAYKFKVEQGWRRFDLQNPSRTERNIEMFAVIEKTLLQNNCISLPVVCLDSSLDPDLTSRLSAIILRHQGSITEDRAMASHHVCASAAPI-DEDEWMRPVMRRDNHIQVHWGMHPDSYDRWLSS--SDV----EGDVEELLHIQRPWRVHAGWLLDTDVFNEWMNEEDYCL 282 HSP 3 Score: 59.3066 bits (142), Expect = 2.548e-8 Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 2823 YLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRAR 3041 +LA EE+KIK LVA LVE Q+KK+E+KL+ F+ELE I++RE E LEQQRQQLL +RQ FH E LK E + R Sbjct: 736 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQTFHTEQLKQAELKVR 808
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Medaka
Match: smarcc2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]) HSP 1 Score: 223.016 bits (567), Expect = 6.512e-63 Identity = 108/269 (40.15%), Postives = 168/269 (62.45%), Query Frame = 3 Query: 15 VTMLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWI--SNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDF 815 + ++ ++KKDG PN +++E + ++ FD VR WL +N KKY Q +P TNKSL++L QLLQ+QEE FG+ + + KLP+ CF DFK GG+L HI +A K+KSDQG RRFDFQ+PSR +RNVEMFM I+ L + C +P+++LS I + + KL+ ++ + E+ + ++H++ P + L ++ R VM+ + ++LHW PDS+D WI S I + P P + ++ +W+L + NEWM+EED+ Sbjct: 4 LGLMAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKSLVQNHCLSRPVIYLSSDIDPKLLGKLKDIIKRHQGSVAEDKSNSSHIVVPIPAS-LEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPTP--------EKPRKVHAKWILDLDQYNEWMNEEDY 263 HSP 2 Score: 82.8037 bits (203), Expect = 6.228e-16 Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 3 Query: 1350 FHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEV 1502 H D +VTEQ H IIIPSY+AWFDYNS+H IERRALPEFF GKNKSK+ E+ Sbjct: 404 LHED-NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEM 453
BLAST of SWI/SNF complex subunit SMARCC2 vs. Planmine SMEST
Match: SMESG000031576.1 (SMESG000031576.1) HSP 1 Score: 2024.98 bits (5245), Expect = 0.000e+0 Identity = 1219/1258 (96.90%), Postives = 1224/1258 (97.30%), Query Frame = 3 Query: 21 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHXXXXXXXXXXXXXXXQHNTSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNMQTPQHQSNMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITQQYSXXXXXXXXXXXXAAYQNVGMS-AAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 3791 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAET+EKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDN E AKEEIKV VKENIDSSTSVKSETDNKVETESHTESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA Q+ Q + P + Q Q + SSSQHQQNMH QNITQQYSQGPLPPQTQQQQAAYQNVGMS AAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN Sbjct: 1 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETIEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDNEEGAKEEIKVGVKENIDSSTSVKSETDNKVETESHTESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA---PQHQQNLQPQHQPNMPPIQHQQQLPIPTQTPQNMSSSQHQQNMHPQNITQQYSQGPLPPQTQQQQAAYQNVGMSAVAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 1255
BLAST of SWI/SNF complex subunit SMARCC2 vs. Planmine SMEST
Match: SMESG000013315.1 (SMESG000013315.1) HSP 1 Score: 2024.98 bits (5245), Expect = 0.000e+0 Identity = 1224/1258 (97.30%), Postives = 1226/1258 (97.46%), Query Frame = 3 Query: 21 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHXXXXXXXXXXXXXXXQHNTSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNMQTPQHQSNMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITQQYSXXXXXXXXXXXXAAYQNVGMS-AAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 3791 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLF KNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDN E AKEEIKVAVKENIDSSTSVKSETDNKVETESHTESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA Q Q Q Q Q +P T + SSSSQHQQNMHTQNITQQYSQGPLPPQTQQQQAAYQNVGMS AAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN Sbjct: 1 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFSKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDNEEGAKEEIKVAVKENIDSSTSVKSETDNKVETESHTESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA--PQHQQNLQPQHQPNMPPIQHQQQLPIPTQTPQNMSSSSQHQQNMHTQNITQQYSQGPLPPQTQQQQAAYQNVGMSAVAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 1256
BLAST of SWI/SNF complex subunit SMARCC2 vs. Planmine SMEST
Match: SMESG000031576.1 (SMESG000031576.1) HSP 1 Score: 2016.12 bits (5222), Expect = 0.000e+0 Identity = 1212/1258 (96.34%), Postives = 1217/1258 (96.74%), Query Frame = 3 Query: 21 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHXXXXXXXXXXXXXXXQHNTSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNMQTPQHQSNMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITQQYSXXXXXXXXXXXXAAYQNVGMS-AAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 3791 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAET+EKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDN E AKEEIKV VKENIDSSTSVKSETDNK ESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA Q+ Q + P + Q Q + SSSQHQQNMH QNITQQYSQGPLPPQTQQQQAAYQNVGMS AAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN Sbjct: 1 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETIEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDNEEGAKEEIKVGVKENIDSSTSVKSETDNK-------ESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA---PQHQQNLQPQHQPNMPPIQHQQQLPIPTQTPQNMSSSQHQQNMHPQNITQQYSQGPLPPQTQQQQAAYQNVGMSAVAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 1248
BLAST of SWI/SNF complex subunit SMARCC2 vs. Planmine SMEST
Match: SMESG000013315.1 (SMESG000013315.1) HSP 1 Score: 2015.35 bits (5220), Expect = 0.000e+0 Identity = 1217/1258 (96.74%), Postives = 1219/1258 (96.90%), Query Frame = 3 Query: 21 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFPKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGXXXXXXXXXXXXXXXXXXXXXXXXNKEDNSGKRRKQNVVRAASLANLRKSKVKEXXXXXXXXXXXXXXXPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGXXXXXXXXXXXXXXXDESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDXXXXXXXXXXXXXXXXXDSSTSVKSETDNKVXXXXXXXXXXXXRMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNXXXXXXXXXXXXXXXXXXXXYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIXXXXXXXXXXXXXXXXXXXAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHXXXXXXXXXXXXXXXQHNTSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNMQTPQHQSNMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITQQYSXXXXXXXXXXXXAAYQNVGMS-AAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 3791 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLF KNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDN E AKEEIKVAVKENIDSSTSVKSETDNK ESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA Q Q Q Q Q +P T + SSSSQHQQNMHTQNITQQYSQGPLPPQTQQQQAAYQNVGMS AAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN Sbjct: 1 MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLATLCYQLLQYQEETFGKMNNEISMVKLPIHCFFDFKPGGSLSHIFSACLKYKSDQGIRRFDFQSPSRTERNVEMFMQIKHELQTHKCWEQPIVWLSPTISAETVEKLRTASRKIHLQIVENANEATHLLFSKNSKVLLNDDMARIVMREGRGIMLHWIGTPDSHDNWISNIPSDCTLSPEPAIRPIIGSNQLWEIDCRWLLSTVENNEWMSEEDFLLPGNQQEFAKQANRKPIISRKCYNGDDLNVMLNVSSQPSSVGDQQQSSAQSLKKDKKKRKLSPSPSNKEDNSGKRRKQNVVRAASLANLRKSKVKEDDDYEDDDVTKDLDDPECPNRVEEVPSNSLGRNTPSRGASAAGNIDNRNNVLYDLDEETQGSGINNNSAAANPNSNIADESFHADMSVTEQAHCIIIPSYSAWFDYNSIHVIERRALPEFFIGKNKSKSAEVYMAYRNFMIDTYRLNPQEYLTFTACRRNLTGDVCSILRVHAFLEQWGLINYQVDQEGKITAGSLGPPNTSHFHVLTDSATGLQSLGNQASVVKSQSNNSAIDKQPTVTANPKDLSNSDNVNLQSKSADSNNETCMPSSISDYSLQTDQYINIASNRSDVNENSTGGVIDPPAGLPARSKEWSDQETLLLLEGLEMYKDDWNKVAEHVGSRTQEECILYFLRLPIEDPYLEGDAALMETLCYQPIPFSKSGNPIMSTVAFLASCVDPRIASEAAKAALNEFSRLKEEVPEYMVKEHKAKVTTAVESGKNVDPDKYGLEEVAGKDPIDKAKEGDNEEGAKEEIKVAVKENIDSSTSVKSETDNK-------ESEGTERMDSSENQPAVVEENEIKVESKDEEMQEKPISNEEEIKIFDKDSNSRRLAEAASVALAASATKARYLAQSEEKKIKGLVAQLVEAQLKKMEVKLKQFQELEAIIEREYEVLEQQRQQLLLDRQAFHMELLKTVESRARVVGHNQFHPINNINHQGSYHNASQAISQNPSVQHQQAGTLPTQQFPQNQVIQQHNPNPVPLQYPPNPMPQHNTSMQSNQIPQHNQSIQQQYPQNLPPPPPQHQSNMQTPQHQSNMA--PQHQQNLQPQHQPNMPPIQHQQQLPIPTQTPQNMSSSSQHQQNMHTQNITQQYSQGPLPPQTQQQQAAYQNVGMSAVAAAAARKPTDINFSEQQIPHQQVSNQSLQNTQQMNPIHHLSSQPDPDGNNTNVNIN 1249 The following BLAST results are available for this feature:
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of SWI/SNF complex subunit SMARCC2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of SWI/SNF complex subunit SMARCC2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035929 ID=SMED30035929|Name=SWI/SNF complex subunit SMARCC2|organism=Schmidtea mediterranea sexual|type=transcript|length=3897bpback to top protein sequence of SMED30035929-orf-1 >SMED30035929-orf-1 ID=SMED30035929-orf-1|Name=SMED30035929-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1258bp MLFLKKKDGLPNQRFYENPEIIALFDTVRTWLTRNCKKYWQNDPMTNKSLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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