large subunit GTPase 1 homolog
|
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035812 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of large subunit GTPase 1 homolog vs. Ensembl Human
Match: LSG1 (large 60S subunit nuclear export GTPase 1 [Source:HGNC Symbol;Acc:HGNC:25652]) HSP 1 Score: 246.514 bits (628), Expect = 8.815e-72 Identity = 130/308 (42.21%), Postives = 177/308 (57.47%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P++++ + PR LE YGI + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV G+LLY H PP DP+ FQ + E + + E I D+T N+ R+ T+ + K S V+ + S+ KPW++ R KEK R Y LD
Sbjct: 357 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPPGRDPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIE-NIVDKTF--FHQENV----RALTKGVQAVMGYKPGSGVVTASTASSENGAGKPWKKHGNRNKKEKSRRLYKHLD 657 HSP 2 Score: 220.32 bits (560), Expect = 3.900e-62 Identity = 106/192 (55.21%), Postives = 139/192 (72.40%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++SV E+S L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D NK NVILINKADLLTA+QR WA YF++E+++VIFWSA
Sbjct: 50 LQSVTEQSSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWSA 241
BLAST of large subunit GTPase 1 homolog vs. Ensembl Human
Match: LSG1 (large 60S subunit nuclear export GTPase 1 [Source:HGNC Symbol;Acc:HGNC:25652]) HSP 1 Score: 213.001 bits (541), Expect = 2.612e-63 Identity = 103/203 (50.74%), Postives = 133/203 (65.52%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
I N + ++ ++++ L + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P+++I PR+ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV G+LLY H PP DP+ FQ
Sbjct: 91 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLIIT--PRED---------------EDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPPGRDPVTFQ 276
BLAST of large subunit GTPase 1 homolog vs. Ensembl Human
Match: GNL1 (G protein nucleolar 1 (putative) [Source:HGNC Symbol;Acc:HGNC:4413]) HSP 1 Score: 115.546 bits (288), Expect = 4.838e-27 Identity = 68/174 (39.08%), Postives = 102/174 (58.62%), Query Frame = 3
Query: 1086 HEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPN--RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
++ G T+G VG+PNVGKSS IN + GRK VSVS TPGHT+ FQT +T + CDCPGL+ PS++ + ++ +GI PI I++ + +A + P ++ L ++ PE EDP+ P A ++ +++ G T+K N + RAA +L+ VDGRL PP
Sbjct: 156 YKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIP---VQALLHLRHPEA---EDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPG 322
BLAST of large subunit GTPase 1 homolog vs. Ensembl Human
Match: GNL1 (G protein nucleolar 1 (putative) [Source:HGNC Symbol;Acc:HGNC:4413]) HSP 1 Score: 117.087 bits (292), Expect = 8.174e-27 Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPN--RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
G T+G VG+PNVGKSS IN + GRK VSVS TPGHT+ FQT +T + CDCPGL+ PS++ + ++ +GI PI I++ + +A + P ++ L ++ PE EDP+ P A ++ +++ G T+K N + RAA +L+ VDGRL PP
Sbjct: 359 GVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIP---VQALLHLRHPEA---EDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPG 522 HSP 2 Score: 72.7886 bits (177), Expect = 9.315e-13 Identity = 50/177 (28.25%), Postives = 94/177 (53.11%), Query Frame = 3
Query: 222 KEGILSQVEKKMFE-KVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRE--NIRVIFWSAKIAEEKRKMEKLSEIKES 737
+E +L V ++ E ++ Y +L PRRP + M+KE+L + E+ +F ++ ++ + + KL+ +E NL+ WRQLWRV+E SDI++ + D R+P++ L YV + V+++NK DL W YF + + V+ +++ + + + S +K+S
Sbjct: 101 REQVLQPVSAELLELDIREVYQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSE--KLSYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTG-ELGLALVLVLNKVDLAPPALVVAWKHYFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKS 274
BLAST of large subunit GTPase 1 homolog vs. Ensembl Human
Match: GNL1 (G protein nucleolar 1 (putative) [Source:HGNC Symbol;Acc:HGNC:4413]) HSP 1 Score: 117.087 bits (292), Expect = 8.174e-27 Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPN--RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
G T+G VG+PNVGKSS IN + GRK VSVS TPGHT+ FQT +T + CDCPGL+ PS++ + ++ +GI PI I++ + +A + P ++ L ++ PE EDP+ P A ++ +++ G T+K N + RAA +L+ VDGRL PP
Sbjct: 359 GVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIP---VQALLHLRHPEA---EDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPG 522 HSP 2 Score: 72.7886 bits (177), Expect = 9.315e-13 Identity = 50/177 (28.25%), Postives = 94/177 (53.11%), Query Frame = 3
Query: 222 KEGILSQVEKKMFE-KVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRE--NIRVIFWSAKIAEEKRKMEKLSEIKES 737
+E +L V ++ E ++ Y +L PRRP + M+KE+L + E+ +F ++ ++ + + KL+ +E NL+ WRQLWRV+E SDI++ + D R+P++ L YV + V+++NK DL W YF + + V+ +++ + + + S +K+S
Sbjct: 101 REQVLQPVSAELLELDIREVYQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSE--KLSYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTG-ELGLALVLVLNKVDLAPPALVVAWKHYFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKS 274
BLAST of large subunit GTPase 1 homolog vs. Ensembl Celegans
Match: C53H9.2 (pep chromosome:WBcel235:I:1832897:1834764:1 gene:WBGene00016907.1 transcript:C53H9.2a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C53H9.2) HSP 1 Score: 180.644 bits (457), Expect = 4.371e-49 Identity = 87/192 (45.31%), Postives = 120/192 (62.50%), Query Frame = 3
Query: 1041 EDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEF 1616
E I E V + A VG+VGYPNVGKSSTIN + G KKVSVSATPG T+ FQT++I +L CDCPGLVMPS + + ++GILP+D +RD+ P +++ + P +E Y I LPE++ P+A +L+S ++M G M S G P+ RAAR++ KD V G+L++ APP V+ EF
Sbjct: 279 ELIAKFKELGHVSDEPSAKPVMVGMVGYPNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSFGRSEMFLNGILPVDQMRDHFGPTSLLLSRVPVHVIEATYSIMLPEMQS-------PSAINLLNSLAFMRGFMASSGIPDCSRAARLMFKDVVSGKLIWAAAPPGVEQEEF 463 HSP 2 Score: 163.31 bits (412), Expect = 6.052e-43 Identity = 83/192 (43.23%), Postives = 123/192 (64.06%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
+ SV +E+ L++ + LA +FTA ++I + ++++ + ++ E L +PRRP + E+L E E FL WR L+E++ + LTP+E N D WR+LWRV+E+SDI++Q+VDARNPLLFR DL+ YVKEVD K ++L+NKADLL +Q+ W EYF++ENI+VIFWSA
Sbjct: 57 IDSVTDETSLEEFLAKAELAGTEFTAEKEQFKIIEKNSAIVVPTRLDYRANLDLQKENEHRLRIPRRPAKELWENMEDLTKLENEAFLQWRSDLSELQEVDGLVLTPFERNPDMWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLLKPEQQASWREYFEKENIKVIFWSA 248
BLAST of large subunit GTPase 1 homolog vs. Ensembl Celegans
Match: nst-1 (Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]) HSP 1 Score: 80.4925 bits (197), Expect = 1.424e-15 Identity = 55/206 (26.70%), Postives = 102/206 (49.51%), Query Frame = 3
Query: 990 IIGNLEVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKG----HLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
I+ N E ++ +G + ++ +L ++ +N VG+VG+PNVGKSS IN++ RK +V PG TK Q + + + + D PG+++ V K + + + +D + D IAP++ I + ++T+ L Y + D N + + L+ + G + P+++ AA+ +L D+ G+L Y PP
Sbjct: 228 ILNNTE----TSKCVGADIVMKILANY-CRNKDIKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQEVELDKNIRLIDSPGVIL---VSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLA--------DFN---SVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPP 414
BLAST of large subunit GTPase 1 homolog vs. Ensembl Celegans
Match: nst-1 (Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]) HSP 1 Score: 80.4925 bits (197), Expect = 1.424e-15 Identity = 55/206 (26.70%), Postives = 102/206 (49.51%), Query Frame = 3
Query: 990 IIGNLEVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKG----HLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
I+ N E ++ +G + ++ +L ++ +N VG+VG+PNVGKSS IN++ RK +V PG TK Q + + + + D PG+++ V K + + + +D + D IAP++ I + ++T+ L Y + D N + + L+ + G + P+++ AA+ +L D+ G+L Y PP
Sbjct: 228 ILNNTE----TSKCVGADIVMKILANY-CRNKDIKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQEVELDKNIRLIDSPGVIL---VSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLA--------DFN---SVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPP 414
BLAST of large subunit GTPase 1 homolog vs. Ensembl Celegans
Match: ngp-1 (Nucleolar GTP-binding protein 2 [Source:UniProtKB/TrEMBL;Acc:Q9XXN4]) HSP 1 Score: 80.4925 bits (197), Expect = 1.491e-15 Identity = 48/191 (25.13%), Postives = 94/191 (49.21%), Query Frame = 3
Query: 1032 IGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVD 1604
G ++ LL F +P + +VG +GYPNVGKSS +N + +K + G TK +Q + + ++ D PG+V P S+ +++ G++ ++ ++D + + ++ + L YGI PE D +D L+ + G + G+P++ ++++L ++ G+L Y PP +
Sbjct: 245 FGKGAVINLLRQFAKLHPDRP-QISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQ-GDSETQIILKGVVRVENVKDPENHVQGVLDRCKPEHLRRQYGI--PEFTDVDD---------FLTKIAIKQGRLLKGGDPDIVAVSKVVLNEFQRGKLPYFVPPPGCE 422
BLAST of large subunit GTPase 1 homolog vs. Ensembl Celegans
Match: ngp-1 (Nucleolar GTP-binding protein 2 [Source:UniProtKB/TrEMBL;Acc:Q9XXN4]) HSP 1 Score: 80.4925 bits (197), Expect = 1.491e-15 Identity = 48/191 (25.13%), Postives = 94/191 (49.21%), Query Frame = 3
Query: 1032 IGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVD 1604
G ++ LL F +P + +VG +GYPNVGKSS +N + +K + G TK +Q + + ++ D PG+V P S+ +++ G++ ++ ++D + + ++ + L YGI PE D +D L+ + G + G+P++ ++++L ++ G+L Y PP +
Sbjct: 245 FGKGAVINLLRQFAKLHPDRP-QISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQ-GDSETQIILKGVVRVENVKDPENHVQGVLDRCKPEHLRRQYGI--PEFTDVDD---------FLTKIAIKQGRLLKGGDPDIVAVSKVVLNEFQRGKLPYFVPPPGCE 422
BLAST of large subunit GTPase 1 homolog vs. Ensembl Fly
Match: Ns3 (gene:FBgn0266284 transcript:FBtr0339578) HSP 1 Score: 223.787 bits (569), Expect = 3.307e-64 Identity = 127/319 (39.81%), Postives = 182/319 (57.05%), Query Frame = 3
Query: 1014 KNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQS----------AAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLDQH 1940
KNS ++ +++ L + H TVG+VGYPNVGKSSTIN++ KKVSVSATPG TKRFQTL + + + CDCPGLVMPS V +K ++++GILPID +RD++ +N++ E+ PR LE YGI + + +GED RPP + E+L +Y Y G MTS G P+ R+AR +LKDYV+GRLLY +PP+V E+ + ++LP +++ + S K + + P PN+ RL D SLV +D + KPWR + K+ +EK+R K+S LD+H
Sbjct: 309 KNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYVLKDYVNGRLLYAMSPPSVPQTEYHTFPERQRRVIEESQLPGQQQRAMRINKSTSKELDNQFFSDKPTHAHVKGRTNFPNV-------------RLA-NDGSLVAGNDPAA------KPWRHV-KKERREKLRKKFSHLDEH 606 HSP 2 Score: 210.305 bits (534), Expect = 2.995e-59 Identity = 109/235 (46.38%), Postives = 148/235 (62.98%), Query Frame = 3
Query: 45 DLGQCLYKSRFGKSTKNIKIDR----------------RKPMKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKI 689
+LG+ L K RFG T+ K+D R + SV EES Q LA +F A I +N K + G+LS+ +++ + E+ L +PRRPK + + EEL AE E FL+WRR LA ++ D+ + +TPYE NL+FWRQLWRV+ERSD+++Q+VDARNPLLFR DLE YVKEV+ +K+N+IL+NK+DLLT +QR WAEYFD E IR F+SA +
Sbjct: 11 NLGRQLIKDRFG-HTQRRKVDNDTMLHTTELQDGYDWGRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHDEHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATL 244
BLAST of large subunit GTPase 1 homolog vs. Ensembl Fly
Match: Ns3 (gene:FBgn0266284 transcript:FBtr0070297) HSP 1 Score: 223.787 bits (569), Expect = 3.307e-64 Identity = 127/319 (39.81%), Postives = 182/319 (57.05%), Query Frame = 3
Query: 1014 KNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQS----------AAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLDQH 1940
KNS ++ +++ L + H TVG+VGYPNVGKSSTIN++ KKVSVSATPG TKRFQTL + + + CDCPGLVMPS V +K ++++GILPID +RD++ +N++ E+ PR LE YGI + + +GED RPP + E+L +Y Y G MTS G P+ R+AR +LKDYV+GRLLY +PP+V E+ + ++LP +++ + S K + + P PN+ RL D SLV +D + KPWR + K+ +EK+R K+S LD+H
Sbjct: 309 KNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYVLKDYVNGRLLYAMSPPSVPQTEYHTFPERQRRVIEESQLPGQQQRAMRINKSTSKELDNQFFSDKPTHAHVKGRTNFPNV-------------RLA-NDGSLVAGNDPAA------KPWRHV-KKERREKLRKKFSHLDEH 606 HSP 2 Score: 210.305 bits (534), Expect = 2.995e-59 Identity = 109/235 (46.38%), Postives = 148/235 (62.98%), Query Frame = 3
Query: 45 DLGQCLYKSRFGKSTKNIKIDR----------------RKPMKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKI 689
+LG+ L K RFG T+ K+D R + SV EES Q LA +F A I +N K + G+LS+ +++ + E+ L +PRRPK + + EEL AE E FL+WRR LA ++ D+ + +TPYE NL+FWRQLWRV+ERSD+++Q+VDARNPLLFR DLE YVKEV+ +K+N+IL+NK+DLLT +QR WAEYFD E IR F+SA +
Sbjct: 11 NLGRQLIKDRFG-HTQRRKVDNDTMLHTTELQDGYDWGRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHDEHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATL 244
BLAST of large subunit GTPase 1 homolog vs. Ensembl Fly
Match: Ns4 (gene:FBgn0032882 transcript:FBtr0081409) HSP 1 Score: 108.227 bits (269), Expect = 2.550e-24 Identity = 68/183 (37.16%), Postives = 97/183 (53.01%), Query Frame = 3
Query: 1080 NPHE-----AGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSK-GNPNLDRAARIILKDYVDGR--LLYRHAPPNVD 1604
PHE +G T+G +G+PNVGKSS INA+ GRK VSVS TPGHTK FQT+ +T + CDCPGLV PS +++ G PI + + + E L L + LPE D +A + +++Y G +T+K P+ RAA IL+ + G+ L+ + PP +
Sbjct: 321 TPHEHVKYHSGVLTIGCIGFPNVGKSSLINALKGRKVVSVSRTPGHTKHFQTIFLTPLVRLCDCPGLVFPSSTPKSLQVLL-GSFPISQLAVPYRSLKFLGEHL---NLPQLLRLHLPEDYDEW------SAVAISDAWAYKRGFLTAKAARPDRYRAANHILRMCLAGQQMLVLQFYPPGFE 493 HSP 2 Score: 63.929 bits (154), Expect = 2.915e-10 Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 3
Query: 264 KVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRV----KLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYF 647
+V Y P RP +KEEL E F + + E++ +R +L+ +ELNL+ WRQLWRV+E SDIL+ +VD R L L Y+ K K +++ NK DL+ W +YF
Sbjct: 101 EVDDRYFAGCDFPVRPPWTLTESKEELDRTENRYFKEY---VDELQKKQRAGDSKELSLFELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYIINTLK-KHAIVVFNKVDLVEPHAVVAWRQYF 228
BLAST of large subunit GTPase 1 homolog vs. Ensembl Fly
Match: Ns1 (gene:FBgn0038473 transcript:FBtr0083426) HSP 1 Score: 80.4925 bits (197), Expect = 1.755e-15 Identity = 55/190 (28.95%), Postives = 87/190 (45.79%), Query Frame = 3
Query: 1032 IGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNV 1601
IG E ++++L ++ +N VG+VG PNVGKSS IN++ + V +TPG TK Q + + K+ DCPG+V S + H ++ + ++D P I R + E + D T E + + G KG P++ AAR +L D+ G++ Y PP V
Sbjct: 246 IGAELLMSMLGNY-CRNKGIKTSIRVGVVGIPNVGKSSIINSLTRGRSCMVGSTPGVTKSMQEVELDSKIKLIDCPGIVFTSGGEN-SHAVLKNAQRVGDVKD---PFTIAESVLKRASKEYFCTMY--------DITNYDTFEEFFAKKAARMGKFLKKGVPDVVAAARSVLNDWNTGKIKYCTQPPEV 422 HSP 2 Score: 59.6918 bits (143), Expect = 5.909e-9 Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDR 653
++++ +VIE +D++++VVDAR+PL RC ++E V+ NK V+++NKADL+ + W +YF R
Sbjct: 140 YFKEFRKVIENADVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRR 208
BLAST of large subunit GTPase 1 homolog vs. Ensembl Fly
Match: Ns2 (gene:FBgn0034243 transcript:FBtr0086906) HSP 1 Score: 73.1738 bits (178), Expect = 4.746e-13 Identity = 45/165 (27.27%), Postives = 81/165 (49.09%), Query Frame = 3
Query: 1104 TVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPE-VKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
+VG +GYPNVGKSS INA+ +K V+ G TK +Q + + +++ DCPG+V P+ + ++ G++ ++ + + P D ++ L PE + T+ L + G + G P++ AR++L D+ G+L + + PP
Sbjct: 317 SVGFIGYPNVGKSSVINALRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYPT-AETDTEKVLKGVVRVELVTN------------PEDYVDSLLKRVRPEYISKNYKIEHWNTSTHFLEQLAQKTGKLLKGGEPDVTVTARMVLNDWQRGKLPF-YVPP 467
BLAST of large subunit GTPase 1 homolog vs. Ensembl Zebrafish
Match: lsg1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:323464]) HSP 1 Score: 234.958 bits (598), Expect = 7.393e-68 Identity = 106/201 (52.74%), Postives = 142/201 (70.65%), Query Frame = 3
Query: 1017 NSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
NS+ ++ +++ + +S + G+ TVGLVGYPNVGKSSTIN IF KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ SGILPID +RD++ I+++ + PR+ LE YGI + ++ EDP+RPPT E+L +Y YM G MT+ G P+ R+AR +LKDYV G+LLY H PP++DP +FQ
Sbjct: 341 NSSRLLRKNELLEMFKSVHSGPTCKDGQITVGLVGYPNVGKSSTINTIFRNKKVSVSATPGHTKHFQTLFVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPAISLVCQNIPRNVLEGTYGINIIRPREDEDPDRPPTYEELLMAYGYMRGFMTAHGQPDQSRSARYVLKDYVSGKLLYCHPPPHIDPEDFQ 541 HSP 2 Score: 207.608 bits (527), Expect = 6.174e-58 Identity = 104/225 (46.22%), Postives = 148/225 (65.78%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA-----KIAEEKRKMEKLSEIKESENEECDESGN 767
++SV E+S L + LA +F A I+ + + + G+LS E + +K+ E +LL +PRRP + E L EK++FL WRR LA +E ++++ LTP+E NLDFWRQLWRVIERSD+++Q+VDARNPLLFRC DLE YVKEV +K+N++L+NKADLLT +QR WA YF +E IR +FWSA ++ E+R + + + +S+ EE S N
Sbjct: 51 LQSVTEQSSLDDFLATAELAGTEFVAEKLNIKFVPAEARAGLLSSEESRRLKKLHEENKQLLRIPRRPPWDESTSPEVLQQTEKDSFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCPDLEKYVKEVSVHKVNMLLLNKADLLTREQRRAWARYFQKEGIRAVFWSALAEAQRLEAEERGEDAMDQEDQSDTEEETASKN 275
BLAST of large subunit GTPase 1 homolog vs. Ensembl Zebrafish
Match: gnl1 (guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]) HSP 1 Score: 109.768 bits (273), Expect = 1.191e-24 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPR-DTLELLYGIQLPEVKDGEDPN-RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
G T+G +G+PNVGKSS +N++ GRK VSVS TPGHTK FQT +T + CDCPGLV PS V K +++GI P+ +++ + + + E+ L+L + PE DP+ + TA +V +++ G T+K N + RAA +L+ +DGRL PP
Sbjct: 335 GVLTLGCIGFPNVGKSSVLNSLVGRKVVSVSRTPGHTKYFQTYYLTPTVKLCDCPGLVFPSRV-DKQLQVLAGIYPVSQLQEPYSSVGHLCERTNYLSILKLTHPDHSPETP--HDPSTQDWTAWDVCEAWAERRGYKTAKAARNDVYRAANSLLRLAIDGRLCLCLRPPG 502 HSP 2 Score: 80.1073 bits (196), Expect = 3.085e-15 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 3
Query: 243 VEKKMFEKVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRE 656
VEK++ + Y K L+ PRRP M +EEL E+++FL + L + L+ +E NL+ WRQLWRVIE SD+++ +VD R+P+L L Y+ E K I ++++NKADL A W +Y ++
Sbjct: 105 VEKELEMDINQIYPEDKGLNFPRRPSWNYSMQREELLRKEEKSFLEYLEALHS--KNPPGTLSHFEHNLETWRQLWRVIEMSDVILLIVDIRHPVLQFPPALYHYITEELKKHI-ILVLNKADLCPAPLVLAWKDYLTKQ 241
BLAST of large subunit GTPase 1 homolog vs. Ensembl Zebrafish
Match: gnl1 (guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]) HSP 1 Score: 109.768 bits (273), Expect = 1.335e-24 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPR-DTLELLYGIQLPEVKDGEDPN-RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
G T+G +G+PNVGKSS +N++ GRK VSVS TPGHTK FQT +T + CDCPGLV PS V K +++GI P+ +++ + + + E+ L+L + PE DP+ + TA +V +++ G T+K N + RAA +L+ +DGRL PP
Sbjct: 347 GVLTLGCIGFPNVGKSSVLNSLVGRKVVSVSRTPGHTKYFQTYYLTPTVKLCDCPGLVFPSRV-DKQLQVLAGIYPVSQLQEPYSSVGHLCERTNYLSILKLTHPDHSPETP--HDPSTQDWTAWDVCEAWAERRGYKTAKAARNDVYRAANSLLRLAIDGRLCLCLRPPG 514 HSP 2 Score: 80.1073 bits (196), Expect = 3.299e-15 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 3
Query: 243 VEKKMFEKVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRE 656
VEK++ + Y K L+ PRRP M +EEL E+++FL + L + L+ +E NL+ WRQLWRVIE SD+++ +VD R+P+L L Y+ E K I ++++NKADL A W +Y ++
Sbjct: 105 VEKELEMDINQIYPEDKGLNFPRRPSWNYSMQREELLRKEEKSFLEYLEALHS--KNPPGTLSHFEHNLETWRQLWRVIEMSDVILLIVDIRHPVLQFPPALYHYITEELKKHI-ILVLNKADLCPAPLVLAWKDYLTKQ 241
BLAST of large subunit GTPase 1 homolog vs. Ensembl Zebrafish
Match: gnl1 (guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]) HSP 1 Score: 109.768 bits (273), Expect = 1.335e-24 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPR-DTLELLYGIQLPEVKDGEDPN-RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
G T+G +G+PNVGKSS +N++ GRK VSVS TPGHTK FQT +T + CDCPGLV PS V K +++GI P+ +++ + + + E+ L+L + PE DP+ + TA +V +++ G T+K N + RAA +L+ +DGRL PP
Sbjct: 347 GVLTLGCIGFPNVGKSSVLNSLVGRKVVSVSRTPGHTKYFQTYYLTPTVKLCDCPGLVFPSRV-DKQLQVLAGIYPVSQLQEPYSSVGHLCERTNYLSILKLTHPDHSPETP--HDPSTQDWTAWDVCEAWAERRGYKTAKAARNDVYRAANSLLRLAIDGRLCLCLRPPG 514 HSP 2 Score: 80.1073 bits (196), Expect = 3.299e-15 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 3
Query: 243 VEKKMFEKVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRE 656
VEK++ + Y K L+ PRRP M +EEL E+++FL + L + L+ +E NL+ WRQLWRVIE SD+++ +VD R+P+L L Y+ E K I ++++NKADL A W +Y ++
Sbjct: 105 VEKELEMDINQIYPEDKGLNFPRRPSWNYSMQREELLRKEEKSFLEYLEALHS--KNPPGTLSHFEHNLETWRQLWRVIEMSDVILLIVDIRHPVLQFPPALYHYITEELKKHI-ILVLNKADLCPAPLVLAWKDYLTKQ 241
BLAST of large subunit GTPase 1 homolog vs. Ensembl Zebrafish
Match: gnl3l (guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-20 Identity = 61/208 (29.33%), Postives = 107/208 (51.44%), Query Frame = 3
Query: 1020 STDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEE 1643
S+ +G + ++ LL ++ +N TVG+VG+PNVGKSS IN++ + +V ATPG TK Q +++ + + DCPG+VM + S +++ + I+ + D + + I + + + YGI P+ + TA E L+ + G + G P+ D+AA+ +L D+ GR+ Y PP + +AE+ E
Sbjct: 218 SSACVGADCLMKLLGNY-CRNQDIKTAITVGVVGFPNVGKSSLINSLKRARACNVGATPGVTKCLQEVHLDKHIKLLDCPGIVMATST-SDAAMILRNCVKIEQLVDPLPAVEAILRRCNKMQIIDHYGI--PDFQ---------TAHEFLALLARRQGKLRKGGLPDSDKAAKSVLMDWTGGRISYFTHPPETHTLPTHVSAEIVAE 412 HSP 2 Score: 57.7658 bits (138), Expect = 3.436e-8 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEK 701
+ R+ +VIE +D++++V+DAR+PL RC +E V + NK V+++NK DL++ E W +Y E V F S+ + K
Sbjct: 115 YCREFKKVIEAADVILEVLDARDPLGCRCPQVEQAVVQSGTNKKIVLVLNKIDLVSKDIVEKWIKYLRNEFPTVAFKSSTQQQNK 199
BLAST of large subunit GTPase 1 homolog vs. Ensembl Xenopus
Match: LSG1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:100145528]) HSP 1 Score: 238.039 bits (606), Expect = 1.606e-69 Identity = 107/208 (51.44%), Postives = 147/208 (70.67%), Query Frame = 3
Query: 1008 VIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQF----PRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
+I N + ++ ++++ + +S + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + ++L CDCPGLVMPS V +K ++ SGILPID +RD++ PI++I+ ++ PR LE +YGI + ++ ED +RPPT+ E L +Y YM G MT+ G P+ R+AR +LKDYV G+LLY H PP ++P EFQ
Sbjct: 270 LITNQSHLVERDELLEIFKSVHAGQRIKEGQITVGLVGYPNVGKSSTINTILGNKKVSVSATPGHTKHFQTLYVEQELCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPISLISLKYCARIPRHALETIYGINIIRPREDEDQDRPPTSEEFLCAYGYMRGFMTAHGQPDQPRSARYVLKDYVSGKLLYCHPPPGIEPAEFQ 477 HSP 2 Score: 207.223 bits (526), Expect = 4.771e-58 Identity = 99/190 (52.11%), Postives = 139/190 (73.16%), Query Frame = 3
Query: 198 IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA-----KIAEEKRKMEKLSEIK-ESENEE 749
I+ ++ + + +L+ E K K++ E + L +PRRP + E L E+E FL WRRQLA++E +K++ LTP+E NLDFWRQLWRVIERSD+++Q+VDARNPLLFRC DLE YVKE+DK+K N+ILINKADLLTA+QR+ WAE+F++E ++V+FWSA ++ E + +S +K ESE+EE
Sbjct: 23 IKFVSAEARTELLTSEETKRIHKLQEENKQFLCIPRRPHWDESTSAEVLRETERETFLQWRRQLAQLEEEKKLILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCQDLECYVKEIDKDKENIILINKADLLTAQQRQSWAEFFEKEGVKVVFWSALAEGQRLTAEGKVWHSISLLKSESESEE 212
BLAST of large subunit GTPase 1 homolog vs. Ensembl Xenopus
Match: LSG1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:100145528]) HSP 1 Score: 238.81 bits (608), Expect = 4.188e-69 Identity = 107/207 (51.69%), Postives = 147/207 (71.01%), Query Frame = 3
Query: 1008 VIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQF---PRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
+I N + ++ ++++ + +S + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + ++L CDCPGLVMPS V +K ++ SGILPID +RD++ PI++I+ ++ PR LE +YGI + ++ ED +RPPT+ E L +Y YM G MT+ G P+ R+AR +LKDYV G+LLY H PP ++P EFQ
Sbjct: 335 LITNQSHLVERDELLEIFKSVHAGQRIKEGQITVGLVGYPNVGKSSTINTILGNKKVSVSATPGHTKHFQTLYVEQELCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPISLISLKYCRIPRHALETIYGINIIRPREDEDQDRPPTSEEFLCAYGYMRGFMTAHGQPDQPRSARYVLKDYVSGKLLYCHPPPGIEPAEFQ 541 HSP 2 Score: 224.557 bits (571), Expect = 6.100e-64 Identity = 112/224 (50.00%), Postives = 157/224 (70.09%), Query Frame = 3
Query: 111 RKPMKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKR-----KMEKLSEIKESENEECD 755
R ++SV E+S + + LA +F A I+ ++ + + +L+ E K K++ E + L +PRRP + E L E+E FL WRRQLA++E +K++ LTP+E NLDFWRQLWRVIERSD+++Q+VDARNPLLFRC DLE YVKE+DK+K N+ILINKADLLTA+QR+ WAE+F++E ++V+FWSA +AE +R K+E L EIKE+E + D
Sbjct: 45 RLNLQSVTEQSSIDDFLATAELAGTEFVAEKLNIKFVSAEARTELLTSEETKRIHKLQEENKQFLCIPRRPHWDESTSAEVLRETERETFLQWRRQLAQLEEEKKLILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCQDLECYVKEIDKDKENIILINKADLLTAQQRQSWAEFFEKEGVKVVFWSA-LAEGQRLTAEGKVEHLDEIKENEGDFTD 267
BLAST of large subunit GTPase 1 homolog vs. Ensembl Xenopus
Match: LSG1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:100145528]) HSP 1 Score: 238.424 bits (607), Expect = 4.344e-69 Identity = 107/209 (51.20%), Postives = 148/209 (70.81%), Query Frame = 3
Query: 1005 EVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQF----PRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
++I N + ++ ++++ + +S + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + ++L CDCPGLVMPS V +K ++ SGILPID +RD++ PI++I+ ++ PR LE +YGI + ++ ED +RPPT+ E L +Y YM G MT+ G P+ R+AR +LKDYV G+LLY H PP ++P EFQ
Sbjct: 321 KLITNQSHLVERDELLEIFKSVHAGQRIKEGQITVGLVGYPNVGKSSTINTILGNKKVSVSATPGHTKHFQTLYVEQELCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPISLISLKYCARIPRHALETIYGINIIRPREDEDQDRPPTSEEFLCAYGYMRGFMTAHGQPDQPRSARYVLKDYVSGKLLYCHPPPGIEPAEFQ 529 HSP 2 Score: 216.853 bits (551), Expect = 3.944e-61 Identity = 102/199 (51.26%), Postives = 144/199 (72.36%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKR 704
++SV E+S + + LA +F A I+ ++ + + +L+ E K K++ E + L +PRRP + E L E+E FL WRRQLA++E +K++ LTP+E NLDFWRQLWRVIERSD+++Q+VDARNPLLFRC DLE YVKE+DK+K N+ILINKADLLTA+QR+ WAE+F++E ++V+FWSA +AE +R
Sbjct: 48 LQSVTEQSSIDDFLATAELAGTEFVAEKLNIKFVSAEARTELLTSEETKRIHKLQEENKQFLCIPRRPHWDESTSAEVLRETERETFLQWRRQLAQLEEEKKLILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCQDLECYVKEIDKDKENIILINKADLLTAQQRQSWAEFFEKEGVKVVFWSA-LAEGQR 245
BLAST of large subunit GTPase 1 homolog vs. Ensembl Xenopus
Match: gnl1 (G protein nucleolar 1 (putative) [Source:NCBI gene;Acc:779895]) HSP 1 Score: 110.538 bits (275), Expect = 8.383e-25 Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 3
Query: 1086 HEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGN-PNLDRAARIILKDYVDGRLLYRHAPPN 1598
++ G ++G VG+PNVGKSS IN + G+K VSVS TPGHTK FQT +T + CDCPGL+ PS++ + ++ +GI PI I++ + ++ + P L ++LP+ E TA + +++ G T+K + + RAA +L+ VDGRL PP
Sbjct: 354 YKDGVLSIGCVGFPNVGKSSLINGLVGKKIVSVSRTPGHTKYFQTYYLTPTVRLCDCPGLIFPSLIDRQQQIL-AGIYPIAQIQEPYTSVGYLSCRIPVPQL-----LKLPQPSGVEGGW---TAWSICEAWADKRGYKTAKASRSDTYRAANSLLRLAVDGRLCLCMRPPG 516 HSP 2 Score: 70.4774 bits (171), Expect = 4.679e-12 Identity = 39/120 (32.50%), Postives = 69/120 (57.50%), Query Frame = 3
Query: 288 LLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYF 647
+L P+RP M+KE + + E++ F + +++ E N + +L+ ++ NL+ WRQLWRV+E SDI++ + D R+P+L L YV + + + ++++NK DL W YF
Sbjct: 124 VLDFPKRPAWTYEMSKEAVQSREEKAFKEYLQKIYESHNPR--ELSYFDHNLETWRQLWRVLEMSDIILLITDIRHPVLHFSPALYDYVTQ-ELGRSLILVLNKTDLAPPSLVVAWKHYF 240
BLAST of large subunit GTPase 1 homolog vs. Ensembl Xenopus
Match: gnl1 (G protein nucleolar 1 (putative) [Source:NCBI gene;Acc:779895]) HSP 1 Score: 110.153 bits (274), Expect = 1.026e-24 Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 3
Query: 1086 HEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGN-PNLDRAARIILKDYVDGRLLYRHAPPN 1598
++ G ++G VG+PNVGKSS IN + G+K VSVS TPGHTK FQT +T + CDCPGL+ PS++ + ++ +GI PI I++ + ++ + P L ++LP+ E TA + +++ G T+K + + RAA +L+ VDGRL PP
Sbjct: 354 YKDGVLSIGCVGFPNVGKSSLINGLVGKKIVSVSRTPGHTKYFQTYYLTPTVRLCDCPGLIFPSLIDRQQQIL-AGIYPIAQIQEPYTSVGYLSCRIPVPQL-----LKLPQPSGVEGGW---TAWSICEAWADKRGYKTAKASRSDTYRAANSLLRLAVDGRLCLCMRPPG 516 HSP 2 Score: 70.4774 bits (171), Expect = 4.781e-12 Identity = 39/120 (32.50%), Postives = 69/120 (57.50%), Query Frame = 3
Query: 288 LLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYF 647
+L P+RP M+KE + + E++ F + +++ E N + +L+ ++ NL+ WRQLWRV+E SDI++ + D R+P+L L YV + + + ++++NK DL W YF
Sbjct: 124 VLDFPKRPAWTYEMSKEAVQSREEKAFKEYLQKIYESHNPR--ELSYFDHNLETWRQLWRVLEMSDIILLITDIRHPVLHFSPALYDYVTQ-ELGRSLILVLNKTDLAPPSLVVAWKHYF 240
BLAST of large subunit GTPase 1 homolog vs. Ensembl Mouse
Match: Lsg1 (large 60S subunit nuclear export GTPase 1 [Source:MGI Symbol;Acc:MGI:107236]) HSP 1 Score: 240.35 bits (612), Expect = 8.514e-70 Identity = 124/310 (40.00%), Postives = 177/310 (57.10%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
+ N + ++ ++++ L + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ +GILPID +RD++ P++++ + PR LE+ YGI + + ++ EDP RPPT+ E+L++Y M G MT+ G P+ R+AR ILKDYV G+LLY H PP DP+ FQ + E + K L P + + ++ + R+ T+ + K ++ + S P KPW++ R KEK R Y LD
Sbjct: 343 VNNDSYLVSKQELLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICNGILPIDQMRDHVPPVSLVCQNIPRRVLEVTYGINIIKPREDEDPYRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVGGKLLYCHPPPGKDPVAFQHQHQQLLESKVKGGE---------LRLQPGKGRKAKQIENVVDKTFFHQENVRALTKGVQAVMGYKPGHGLVTAAAASAENVPGKPWKKHGNRNKKEKSRRLYKHLD 643 HSP 2 Score: 214.542 bits (545), Expect = 2.805e-60 Identity = 104/192 (54.17%), Postives = 138/192 (71.88%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++SV E+S L+ + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP R + EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D K NVILINKADLLTA+QR WA +F++E ++VIFWSA
Sbjct: 50 LQSVTEQSSLEDFLATAELAGTEFVAEKLNIKFVPPEARTGLLSFEESQRIKKLHEENRQFLCIPRRPNWDRKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRFAWAVHFEKEGVKVIFWSA 241
BLAST of large subunit GTPase 1 homolog vs. Ensembl Mouse
Match: Gnl1 (guanine nucleotide binding protein-like 1 [Source:MGI Symbol;Acc:MGI:95764]) HSP 1 Score: 117.087 bits (292), Expect = 7.212e-27 Identity = 67/171 (39.18%), Postives = 100/171 (58.48%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPN--RPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
G T+G +G+PNVGKSS IN + GRK VSVS TPGHT+ FQT +T + CDCPGL+ PS++ + ++ +GI PI I++ + +A + P ++ L ++ PE EDP+ P A ++ +++ G T+K N + RAA +L+ VDGRL PP
Sbjct: 359 GVVTIGCIGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVL-AGIYPIAQIQEPYTSVGYLASRIP---VQALLHLRHPEA---EDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFYPPG 522 HSP 2 Score: 70.0922 bits (170), Expect = 5.307e-12 Identity = 46/147 (31.29%), Postives = 78/147 (53.06%), Query Frame = 3
Query: 222 KEGILSQVEKKMFE-KVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDR 653
+E +L V ++ E ++ Y +L PRRP + M+KE+L + E+ +F + ++ + KL+ +E NL+ WRQLWRV+E SDI++ + D R+P++ L YV + V+++NK DL W YF +
Sbjct: 101 REQVLQPVSAEVLELDIREVYQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQEYLGKIHGAYTSE--KLSYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTG-ELGLALVLVLNKVDLAPPALVVAWKHYFHQ 244
BLAST of large subunit GTPase 1 homolog vs. Ensembl Mouse
Match: Gnl2 (guanine nucleotide binding protein-like 2 (nucleolar) [Source:MGI Symbol;Acc:MGI:2385207]) HSP 1 Score: 84.3445 bits (207), Expect = 2.244e-16 Identity = 58/212 (27.36%), Postives = 103/212 (48.58%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVD-PIEFQ----SAAELPEE 1643
T+ G + LL F K + + +VG +GYPNVGKSS IN + +K +V+ G TK +Q + + ++ DCPG+V PS S+ +++ G++ ++ I+ I + E+ + + Y I+ E A + L + G + G P++ ++++L D+ GR+ + PPN + P + Q S E+P E
Sbjct: 286 TNPFGKGAFIQLLRQFG-KLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPS-EDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWE-----------NAEDFLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGRIPFFVKPPNAELPTDSQLPPSSPLEVPTE 484 HSP 2 Score: 50.447 bits (119), Expect = 7.712e-6 Identity = 23/79 (29.11%), Postives = 46/79 (58.23%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++VI+ SD+++QV+DAR+P+ R +E Y+K+ K + ++NK DL+ + W ++ + F ++
Sbjct: 206 IWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHAS 284
BLAST of large subunit GTPase 1 homolog vs. Ensembl Mouse
Match: Gnl3l (guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:MGI Symbol;Acc:MGI:2448557]) HSP 1 Score: 73.9442 bits (180), Expect = 3.429e-13 Identity = 56/217 (25.81%), Postives = 103/217 (47.47%), Query Frame = 3
Query: 1005 EVIKNSTDMIGVEDIVTLLESF----EVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEE 1643
E + S G E+++ +L ++ EV+ G VG+VG PNVGKSS IN++ + SV A PG TK Q + + + + D PG+V P G ++ + I + + D + P+ I ++ + + YG+ + T L++ ++ G G + ++AA+ +L D+V G++ + PP + +AE+ +E
Sbjct: 216 ESLLKSRACFGAENLMRVLGNYCRLGEVR-----GHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKFMQEVYLDKFIRLLDAPGIV-PGPNSEVGTILRNCI-HVQKLADPVTPVETILQRCNLEEISSYYGVSGFQ-----------TTEHFLTAVAHRLGKKKKGGVYSQEQAAKAVLADWVSGKISFYTLPPPTHTLPTHLSAEIVKE 414 HSP 2 Score: 58.151 bits (139), Expect = 2.398e-8 Identity = 31/95 (32.63%), Postives = 56/95 (58.95%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSEIK 731
++++ +V+E SD++++V+DAR+PL RC +E V + NK V+++NK DL+ + E W EY E V F K + + +++ L+ K
Sbjct: 117 YYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEIVEKWLEYLLNELPTVAF---KASTQHHQVKNLTRCK 208
BLAST of large subunit GTPase 1 homolog vs. Ensembl Mouse
Match: Gnl3l (guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:MGI Symbol;Acc:MGI:2448557]) HSP 1 Score: 73.9442 bits (180), Expect = 3.429e-13 Identity = 56/217 (25.81%), Postives = 103/217 (47.47%), Query Frame = 3
Query: 1005 EVIKNSTDMIGVEDIVTLLESF----EVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEE 1643
E + S G E+++ +L ++ EV+ G VG+VG PNVGKSS IN++ + SV A PG TK Q + + + + D PG+V P G ++ + I + + D + P+ I ++ + + YG+ + T L++ ++ G G + ++AA+ +L D+V G++ + PP + +AE+ +E
Sbjct: 216 ESLLKSRACFGAENLMRVLGNYCRLGEVR-----GHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKFMQEVYLDKFIRLLDAPGIV-PGPNSEVGTILRNCI-HVQKLADPVTPVETILQRCNLEEISSYYGVSGFQ-----------TTEHFLTAVAHRLGKKKKGGVYSQEQAAKAVLADWVSGKISFYTLPPPTHTLPTHLSAEIVKE 414 HSP 2 Score: 58.151 bits (139), Expect = 2.398e-8 Identity = 31/95 (32.63%), Postives = 56/95 (58.95%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSEIK 731
++++ +V+E SD++++V+DAR+PL RC +E V + NK V+++NK DL+ + E W EY E V F K + + +++ L+ K
Sbjct: 117 YYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEIVEKWLEYLLNELPTVAF---KASTQHHQVKNLTRCK 208
BLAST of large subunit GTPase 1 homolog vs. UniProt/SwissProt
Match: sp|Q9H089|LSG1_HUMAN (Large subunit GTPase 1 homolog OS=Homo sapiens OX=9606 GN=LSG1 PE=1 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 4.233e-71 Identity = 130/308 (42.21%), Postives = 177/308 (57.47%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P++++ + PR LE YGI + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV G+LLY H PP DP+ FQ + E + + E I D+T N+ R+ T+ + K S V+ + S+ KPW++ R KEK R Y LD
Sbjct: 357 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPPGRDPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIE-NIVDKTF--FHQENV----RALTKGVQAVMGYKPGSGVVTASTASSENGAGKPWKKHGNRNKKEKSRRLYKHLD 657 HSP 2 Score: 220.32 bits (560), Expect = 1.873e-61 Identity = 106/192 (55.21%), Postives = 139/192 (72.40%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++SV E+S L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D NK NVILINKADLLTA+QR WA YF++E+++VIFWSA
Sbjct: 50 LQSVTEQSSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWSA 241
BLAST of large subunit GTPase 1 homolog vs. UniProt/SwissProt
Match: sp|Q5BJT6|LSG1_RAT (Large subunit GTPase 1 homolog OS=Rattus norvegicus OX=10116 GN=Lsg1 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.568e-69 Identity = 127/310 (40.97%), Postives = 176/310 (56.77%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
+ N + ++ ++++ L + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ SGILPID +RD++ P++++ + PR LE YGI + + + EDP RPPT+ E+L++Y M G MT+ G P+ R+AR ILKDYV G+LLY H PP DP+ FQ E + K + L P + V ++ + R+ T+ + K S ++ + S P KPW++ R KEK R Y LD
Sbjct: 354 MSNKSHLVSKQELLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPVSLVCQNIPRRVLEATYGINIIKPGEDEDPYRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVRGKLLYCHPPPGKDPVAFQHQHRQLLENKIKGEE---------LRLQPGKTQKAKQVENVVDKTFFHQENVRALTKGVQAVMGYKPGSGLVTAAAASAENVPGKPWKKHGNRNKKEKSRRLYRHLD 654 HSP 2 Score: 213.772 bits (543), Expect = 3.535e-59 Identity = 103/192 (53.65%), Postives = 138/192 (71.88%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++SV E+S L+ + LA +F A I+ + + + G+LS E + +++ E + L +PRRP R + EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D K NVILINKADLLTA+QR WA +F++E ++VIFWSA
Sbjct: 50 LQSVTEQSSLEDFLATAELAGTEFVAEKLNIKFVPPEARTGLLSFEESQRIKRLHEENRQFLCIPRRPNWDRKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRVAWAVHFEKEGVKVIFWSA 241
BLAST of large subunit GTPase 1 homolog vs. UniProt/SwissProt
Match: sp|Q3UM18|LSG1_MOUSE (Large subunit GTPase 1 homolog OS=Mus musculus OX=10090 GN=Lsg1 PE=1 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 5.956e-69 Identity = 124/310 (40.00%), Postives = 177/310 (57.10%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
+ N + ++ ++++ L + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ +GILPID +RD++ P++++ + PR LE+ YGI + + ++ EDP RPPT+ E+L++Y M G MT+ G P+ R+AR ILKDYV G+LLY H PP DP+ FQ + E + K L P + + ++ + R+ T+ + K ++ + S P KPW++ R KEK R Y LD
Sbjct: 343 VNNDSYLVSKQELLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICNGILPIDQMRDHVPPVSLVCQNIPRRVLEVTYGINIIKPREDEDPYRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVGGKLLYCHPPPGKDPVAFQHQHQQLLESKVKGGE---------LRLQPGKGRKAKQIENVVDKTFFHQENVRALTKGVQAVMGYKPGHGLVTAAAASAENVPGKPWKKHGNRNKKEKSRRLYKHLD 643 HSP 2 Score: 214.542 bits (545), Expect = 1.962e-59 Identity = 104/192 (54.17%), Postives = 138/192 (71.88%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++SV E+S L+ + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP R + EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D K NVILINKADLLTA+QR WA +F++E ++VIFWSA
Sbjct: 50 LQSVTEQSSLEDFLATAELAGTEFVAEKLNIKFVPPEARTGLLSFEESQRIKKLHEENRQFLCIPRRPNWDRKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRFAWAVHFEKEGVKVIFWSA 241
BLAST of large subunit GTPase 1 homolog vs. UniProt/SwissProt
Match: sp|Q2YDM7|LSG1_BOVIN (Large subunit GTPase 1 homolog OS=Bos taurus OX=9913 GN=LSG1 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.142e-68 Identity = 126/308 (40.91%), Postives = 179/308 (58.12%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ + + + G+ TVGLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ SGILPID +RD++ P++++ + PR LE YGI + + ++ EDP RPPT+ E+L++Y M G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + EK+ N ++ + V+ K + R+ T+ + K S ++ + S+ KPW++ R KEK R Y LD
Sbjct: 351 IHNFSHLVSKQELLEVFKQLHSGKKVKDGQLTVGLVGYPNVGKSSTINTILGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGIDIIKPREDEDPRRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQYQHQRLLEKKVNGGEIKLQVVR-----NKKVYQIENVVD--KAFFHQENVRALTKGVQAVMGYKPGSGLVTAAAVSSERGAGKPWKKHGNRNKKEKSRRLYKHLD 651 HSP 2 Score: 218.779 bits (556), Expect = 4.729e-61 Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSE----------IKESENEECDES 761
++SV E+S L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRPK + + EEL AEK+NFL WRRQL +E ++ + LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVK +D NK NVILINKADLLTA+QR WAE+F +EN++VIFWSA +AE + M E EN CDE+
Sbjct: 50 LQSVTEQSSLDDFLATAELAGTEFVAEKLNIKFVPPEARTGLLSFEENQRIKKLHEENKQFLCIPRRPKWDQKTSPEELKQAEKDNFLEWRRQLVWLEEEQNLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKTIDDNKENVILINKADLLTAEQRSAWAEFFKKENVKVIFWSA-LAEAIKLMGNSKGDVNGDTGEAITAEFENSSCDEA 276
BLAST of large subunit GTPase 1 homolog vs. UniProt/SwissProt
Match: sp|Q4R8L2|LSG1_MACFA (Large subunit GTPase 1 homolog OS=Macaca fascicularis OX=9541 GN=LSG1 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.724e-66 Identity = 106/212 (50.00%), Postives = 145/212 (68.40%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGL-VGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAE-LPE 1640
+ N + ++ ++++ L + + G+ T+G GYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P++++ + PR LE YGI + + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + LPE
Sbjct: 357 LHNFSHLVSKQELLELFKELHTGRKVKDGQLTIGTGWGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQHQHQRLPE 568 HSP 2 Score: 218.779 bits (556), Expect = 6.515e-61 Identity = 113/227 (49.78%), Postives = 150/227 (66.08%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIA---------EEKRKMEKLSEIKESENEECDES 761
++SV EES L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK+NFL WRRQL +E ++++ LT +E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D +K NVILINKADLLTA+QR WA YF++E+++VIFWSA EE K ++ S E E+ DE+
Sbjct: 50 LQSVTEESSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNKNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTSFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAGAIHLNGDSEEEANKDDRQSNTAEFEHSSFDEA 276
BLAST of large subunit GTPase 1 homolog vs. TrEMBL
Match: A0A2K5NN87 (Large 60S subunit nuclear export GTPase 1 OS=Cercocebus atys OX=9531 GN=LSG1 PE=4 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 5.984e-70 Identity = 129/311 (41.48%), Postives = 183/311 (58.84%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAE-LPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ T+GLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + +L CDCPGLVMPS V +K + SGILPID +RD++ P++ + + PR LE YGI + + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + LPE K ++ ++ P + + +I + R+ T+ + K S V+ + S+ KPW++ R KEK R Y LD
Sbjct: 351 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTIGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPRLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSYVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQHQHQRLPENKMNGDE----------IKMQPGRNKKVKQIENIVDKTFFHQENVRALTKGVQAVMGYKPGSGVVTAATVSSENGAGKPWKKHGNRNKKEKSRRLYKHLD 651 HSP 2 Score: 201.83 bits (512), Expect = 2.493e-52 Identity = 109/227 (48.02%), Postives = 146/227 (64.32%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA---------KIAEEKRKMEKLSEIKESENEECDES 761
++SV EES L + LA +F A I+ + + + G+LS E + +K+ E + L P + EEL AEK++FL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D +K NVILINKADLLTA+QR WA YF++E+++VIFWSA EE K ++ S E E+ DE+
Sbjct: 50 LQSVTEESSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLY----PNSLSYF--EELKQAEKDSFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAEAIHLNGDSEEEANKDDRQSNTAEFEHSSFDEA 270
BLAST of large subunit GTPase 1 homolog vs. TrEMBL
Match: H9Z2S5 (Large subunit GTPase 1 homolog OS=Macaca mulatta OX=9544 GN=LSG1 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 7.890e-70 Identity = 129/311 (41.48%), Postives = 183/311 (58.84%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAE-LPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ T+GLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P++++ + PR LE YGI + + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + LPE K ++ ++ P + + +I + R+ T+ + K S V+ + S+ KPW++ R KEK R Y LD
Sbjct: 357 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTIGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQHQHQRLPENKTNGDE----------IKMQPGRNKKVKQIENIVDKTFFHQENVRALTKGVQAVMGYKPGSGVVTAATVSSENGAGKPWKKHGNRNKKEKSRRLYKHLD 657 HSP 2 Score: 222.246 bits (565), Expect = 9.273e-60 Identity = 114/227 (50.22%), Postives = 151/227 (66.52%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIA---------EEKRKMEKLSEIKESENEECDES 761
++SV EES L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D +K NVILINKADLLTA+QR WA YF++E+++VIFWSA EE K ++ S E E+ DE+
Sbjct: 50 LQSVTEESSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNKNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAGAIHLNGDSEEEANKDDRQSNTAEFEHSSFDEA 276
BLAST of large subunit GTPase 1 homolog vs. TrEMBL
Match: A0A2K6A1U4 (Large 60S subunit nuclear export GTPase 1 OS=Mandrillus leucophaeus OX=9568 GN=LSG1 PE=4 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 8.745e-70 Identity = 129/311 (41.48%), Postives = 183/311 (58.84%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAE-LPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ T+GLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P++++ + PR LE YGI + + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + LPE K ++ ++ P + + +I + R+ T+ + K S V+ + S+ KPW++ R KEK R Y LD
Sbjct: 357 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTIGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQHQHQRLPENKTNGDE----------IKMQPGRNKKVKQIENIVDKTFFHQENVRALTKGVQAVMGYKPGSGVVTAATVSSENGAGKPWKKHGNRNKKEKSRRLYKHLD 657 HSP 2 Score: 222.246 bits (565), Expect = 1.124e-59 Identity = 114/227 (50.22%), Postives = 151/227 (66.52%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIA---------EEKRKMEKLSEIKESENEECDES 761
++SV EES L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D +K NVILINKADLLTA+QR WA YF++E+++VIFWSA EE K ++ S E E+ DE+
Sbjct: 50 LQSVTEESSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNKNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAGAIHLNGDSEEEANKDDRQSNTAEFEHSSFDEA 276
BLAST of large subunit GTPase 1 homolog vs. TrEMBL
Match: H9EXF6 (Large subunit GTPase 1 homolog OS=Macaca mulatta OX=9544 GN=LSG1 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.302e-70 Identity = 129/311 (41.48%), Postives = 183/311 (58.84%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAE-LPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ T+GLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K + SGILPID +RD+I P++++ + PR LE YGI + + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + LPE K ++ ++ P + + +I + R+ T+ + K S ++ + S+ KPW++ R KEK R Y LD
Sbjct: 357 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTIGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHIPPVSLVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQHQHQRLPENKTNGDE----------IKMQPGRNKKVKQIENIVDKTFFHQENVRALTKGVQAVMGYKPGSGIVTAATVSSENGAGKPWKKHGNRNKKEKSRRLYKHLD 657 HSP 2 Score: 222.246 bits (565), Expect = 1.090e-59 Identity = 114/227 (50.22%), Postives = 151/227 (66.52%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIA---------EEKRKMEKLSEIKESENEECDES 761
++SV EES L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK+NFL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D +K NVILINKADLLTA+QR WA YF++E+++VIFWSA EE K ++ S E E+ DE+
Sbjct: 50 LQSVTEESSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNKNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAGAIHLNGDSEEEANKDDRQSNTAEFEHSSFDEA 276
BLAST of large subunit GTPase 1 homolog vs. TrEMBL
Match: A0A2K5NN77 (Large 60S subunit nuclear export GTPase 1 OS=Cercocebus atys OX=9531 GN=LSG1 PE=4 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 1.062e-69 Identity = 129/311 (41.48%), Postives = 184/311 (59.16%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAE-LPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIK--RSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLD 1934
I N + ++ ++++ L + + G+ T+GLVGYPNVGKSSTIN I G KKVSVSATPGHTK FQTL + +L CDCPGLVMPS V +K + SGILPID +RD++ P++++ + PR LE YGI + + ++ EDP+RPPT+ E+L++Y YM G MT+ G P+ R+AR ILKDYV+G+LLY H PP DP+ FQ + LPE K ++ ++ P + + +I + R+ T+ + K S V+ + S+ KPW++ R KEK R Y LD
Sbjct: 416 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTIGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPRLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPPPGRDPVTFQHQHQRLPENKMNGDE----------IKMQPGRNKKVKQIENIVDKTFFHQENVRALTKGVQAVMGYKPGSGVVTAATVSSENGAGKPWKKHGNRNKKEKSRRLYKHLD 716 HSP 2 Score: 219.935 bits (559), Expect = 1.893e-58 Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA---------KIAEEKRKMEKLSEIKESENEECDES 761
++SV EES L + LA +F A I+ + + + G+LS E + +K+ E + L +PRRP + T EEL AEK++FL WRRQL +E ++++ LTP+E NLDFWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKE+D +K NVILINKADLLTA+QR WA YF++E+++VIFWSA EE K ++ S E E+ DE+
Sbjct: 109 LQSVTEESSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNKNTTPEELKQAEKDSFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAEAIHLNGDSEEEANKDDRQSNTAEFEHSSFDEA 335
BLAST of large subunit GTPase 1 homolog vs. Ensembl Cavefish
Match: lsg1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:323464]) HSP 1 Score: 228.409 bits (581), Expect = 1.427e-65 Identity = 105/205 (51.22%), Postives = 143/205 (69.76%), Query Frame = 3
Query: 1017 NSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQF----PRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
NS+ ++ ++++ + +S + G+ TVGLVGYPNVGKSSTIN IF KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ GILPID +RD++ I++I+ Q+ PR LE YG + ++ EDP+RPPTA E+L++Y M G MT+ G P+ R+AR +LKDYV G+LLY H PP+++P +FQ
Sbjct: 339 NSSRLLHKDELLEMFKSAHSGPTCKEGQLTVGLVGYPNVGKSSTINTIFQNKKVSVSATPGHTKHFQTLFVEPSLCLCDCPGLVMPSFVSTKAEMICCGILPIDQMRDHVPAISLISSQYSLTIPRTVLEGTYGFNIIRPREDEDPDRPPTAEELLAAYGCMRGFMTAHGQPDQSRSARYVLKDYVSGKLLYCHPPPHINPEDFQ 543 HSP 2 Score: 203.756 bits (517), Expect = 1.519e-56 Identity = 105/237 (44.30%), Postives = 145/237 (61.18%), Query Frame = 3
Query: 27 MSHKKS-DLGQCLYKSRFGKSTKNIKIDR--------------RKPMKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWS 680
M KKS LG+ L K R G + N + D R ++SV E+S L + LA +F A +R + + + G+L+ E K +K+ + + L +PRRP + E L E++ FL WRR LA +E ++++ LTP+E NLDFWRQLWRVIERSD+++Q++DARNPLLFRC DLE YVKEV K+N++L+NKADLLT +QR WA YF +E IR +FWS
Sbjct: 1 MGKKKSTGLGRALIKERLGAARGNRRNDTWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELAGTEFIAEKLNVRFVPPEARTGLLTAEESKRLKKLHEDNRQFLRIPRRPPWDESTSPEVLQQTERDTFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQILDARNPLLFRCPDLEKYVKEVSGQKVNMLLLNKADLLTREQRRTWARYFQKEGIRAVFWS 237
BLAST of large subunit GTPase 1 homolog vs. Ensembl Cavefish
Match: gnl1 (guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]) HSP 1 Score: 118.627 bits (296), Expect = 1.257e-27 Identity = 71/186 (38.17%), Postives = 106/186 (56.99%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFP-RDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPNV--DPIEFQSAAELPE 1640
G T+G +G+PNVGKSS +N++ GRK VSVS TPGHTK FQT +T + CDCPGLV PS V +K +V+GI P+ +++ + + + E+ P L+L + PE G TA +V +++ G T+K N + RAA +L+ +DGR PP + +++S ELP+
Sbjct: 334 GVLTLGCIGFPNVGKSSVLNSLVGRKVVSVSRTPGHTKYFQTYYLTPTVKLCDCPGLVFPSRV-NKQLQIVAGIYPVSQLQEPYSSVGFLCERTPFLSVLKLTH----PEHSPGSQEPHDWTAWDVCEAWAERRGYKTAKAARNDVYRAANSLLRLAIDGRFCMSLRPPGYTQNKDQWESHPELPD 514 HSP 2 Score: 70.0922 bits (170), Expect = 3.686e-12 Identity = 62/215 (28.84%), Postives = 99/215 (46.05%), Query Frame = 3
Query: 66 KSRFGKSTKNIKIDR-----RKPMKSVLEESDLQKIFSLGALADKDFTAIRVINDKDKEG--------------ILSQVEKKMFE-KVKSEY--SKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEY 644
KS G+S++N ++R R+ S E +D+++I D + R +KE IL V ++ E + Y + L PRRP M +EEL E+ +F + L + L+ +E NL+ WRQLWRV+E SD+++ +VD R+P+L L Y+ K ++ V+++NK DL A W Y
Sbjct: 26 KSGSGQSSRNASVERGVRRDRQSDTSDSETTDIRRINQQPGTRDGRYDPNRFRLHFEKESKDEVERRKRMAQERILQPVPERELEMDINQIYPEEQGLDFPRRPSWHYGMQREELLRKEERSFREFLENLHS--RNPPETLSHFEHNLETWRQLWRVLEMSDVILLIVDIRHPVLQFPPALYHYITGPLKKQV-VLVLNKIDLCPASLVLAWKHY 237
BLAST of large subunit GTPase 1 homolog vs. Ensembl Cavefish
Match: gnl1 (guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]) HSP 1 Score: 106.686 bits (265), Expect = 1.106e-23 Identity = 70/185 (37.84%), Postives = 103/185 (55.68%), Query Frame = 3
Query: 1095 GKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFP-RDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN-VDPIEFQSAAELPE 1640
G T+G + +PNVGKSS +N++ GRK VSVS TPGHTK FQT +T + CDCPGLV PS V +K +V+GI P+ +++ + + + E+ P L+L + PE G TA +V ++ G T+K N + RAA +L+ +DGR PP +++S ELP+
Sbjct: 344 GVLTLGCI-FPNVGKSSVLNSLVGRKVVSVSRTPGHTKYFQTYYLTPTVKLCDCPGLVFPSRV-NKQLQIVAGIYPVSQLQEPYSSVGFLCERTPFLSVLKLTH----PEHSPGSQEPHDWTAWDVC-EWAERRGYKTAKAARNDVYRAANSLLRLAIDGRFCMSLRPPGYTQNKQWESHPELPD 521 HSP 2 Score: 65.4698 bits (158), Expect = 9.534e-11 Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 3
Query: 291 LSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILI-NKADLLTAKQREIWAEY 644
L PRRP M +EEL E+ +F + L + L+ +E NL+ WRQLWRV+E SD+++ +VD R+P+ LY K V+L+ NK DL A W Y
Sbjct: 120 LDFPRRPSWHYGMQREELLRKEERSFREFLENLHS--RNPPETLSHFEHNLETWRQLWRVLEMSDVILLIVDIRHPVQVLQFPPALYHYITGPLKKQVVLVLNKIDLCPASLVLAWKHY 236
BLAST of large subunit GTPase 1 homolog vs. Ensembl Cavefish
Match: gnl3l (G protein nucleolar 3 like [Source:NCBI gene;Acc:103043878]) HSP 1 Score: 95.1301 bits (235), Expect = 4.126e-20 Identity = 59/209 (28.23%), Postives = 104/209 (49.76%), Query Frame = 3
Query: 1017 NSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEE 1643
S+ +G E ++ LL ++ +N TVG+VG+PNVGKSS IN++ + SV ATPG TK Q +++ + + DCPG+VM + +S +++ + I+ + D + + I + + + Y + + TA E L+ + G + G P+ D AA+ +L D+ GR+ Y PP + +A++ E
Sbjct: 219 GSSACVGAECLMKLLGNY-CRNQDIKTTITVGVVGFPNVGKSSLINSLKRTRACSVGATPGVTKCLQEVHLDKHIKLLDCPGIVM-ATSNSDAVMILRNCVKIEQLVDPVPAVEAILRRCSKTQIMEFYSV-----------SDFHTAPEFLALLARRQGKLRKGGLPDSDAAAKSVLMDWTGGRISYFTHPPETHRLPTHVSAQIVSE 414 HSP 2 Score: 57.7658 bits (138), Expect = 2.675e-8 Identity = 40/151 (26.49%), Postives = 73/151 (48.34%), Query Frame = 3
Query: 321 RFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYEL------NLD-------------FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEK 716
R ++E +E L RR L + D + + +EL NL+ ++R+ +VIE +D++++V+DAR+PL RC +E V + NK V+++NK DL+ E W +Y R + + A ++ R +++
Sbjct: 56 RLEEQQERQKISREKELMKRRSLESFQKDIQQRQGAFELKEMEMKNLEKNVNFENENSRKAYYREFKKVIEAADVILEVLDARDPLGCRCPQVEQAVVQSGTNKKIVLVLNKIDLVPKDLVEKWIKYL-RNEFPTVAFKASTQQQNRNLKR 205
BLAST of large subunit GTPase 1 homolog vs. Ensembl Cavefish
Match: gnl2 (guanine nucleotide binding protein-like 2 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-040426-2317]) HSP 1 Score: 82.4185 bits (202), Expect = 6.337e-16 Identity = 50/183 (27.32%), Postives = 93/183 (50.82%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGR 1571
T+ G ++ LL F K + + +VG +GYPNVGKSS IN + +K +V+ G TK +Q + + ++ DCPG+V PS S+ +++ G++ ++ IR+ I + E+ + ++ Y ++P ED L ++ G + G P+L ++++L D+ G+
Sbjct: 286 TNSFGKGSLIQLLRQFG-KLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPLAGETKVWQYITLMRRIFLIDCPGVVYPS-EDSETDIVLKGVVQVEKIRNPEDHIGAVLERAKAEYIQKTY--RIPSWSSAED---------FLEKLAFRTGKLLKGGEPDLPTVSKMVLNDWQRGQ 455 HSP 2 Score: 53.5286 bits (127), Expect = 6.949e-7 Identity = 25/79 (31.65%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++VI+ SD++IQV+DAR+P+ R ++E Y+K+ K + ++NK DL+ + W +E + F ++
Sbjct: 206 IWGELYKVIDSSDVVIQVLDARDPMGTRSKNIETYIKKEKSWKHLIFVLNKCDLIPTWVTKRWVAVLSQEYPTLAFHAS 284
BLAST of large subunit GTPase 1 homolog vs. Ensembl Sea Lamprey
Match: lsg1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:323464]) HSP 1 Score: 224.557 bits (571), Expect = 1.254e-64 Identity = 104/207 (50.24%), Postives = 141/207 (68.12%), Query Frame = 3
Query: 1011 IKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINI----IAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
++NS+ ++ ++++ + S V + G+TT+GLVGYPNVGKSSTIN I KKV VSATPG TK FQTL + L CDCPGLVMPS V +K + SGILPID +RD++ P+++ + + PR LE YGI + ++ EDP+RPPTA E+LS+Y YM G MT+ G P+ R+AR ILKDYV+G+LL+ + PP D FQ
Sbjct: 355 VRNSSRLLHQDELLLVFRSLHVGPKVKRGQTTIGLVGYPNVGKSSTINTILQNKKVPVSATPGRTKHFQTLFVDSDLCLCDCPGLVMPSFVSTKAEMACSGILPIDQMRDHVPPVSLMPRHVCQHIPRAVLEATYGINIVRPREDEDPDRPPTAEELLSAYGYMRGYMTAHGQPDQPRSARYILKDYVNGKLLFCYPPPGFDVKAFQ 561 HSP 2 Score: 201.06 bits (510), Expect = 4.250e-56 Identity = 98/199 (49.25%), Postives = 139/199 (69.85%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKR 704
++SV E+S L + S LA +FTA I+V+++ + G+LS E + + + L++PRRP+ T E L E+E+FL WRRQLA ++ + + LTP+E NLDFWRQLWRVIERSD+++Q+VDARNPLLFRC DLE YV EV +K N+IL+NKADLL+ QR+ WA++F+ +++RV+FWSA + E KR
Sbjct: 48 LQSVTEQSALDEFLSTAELAGTEFTAEKLNIKVVSEVARTGVLSDEESQKMKLLHESNKHFLNIPRRPRWDASTTTEALQLNEREDFLAWRRQLAILQEKEELILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCEDLERYVTEVSPHKDNLILVNKADLLSEGQRQAWADFFEAQDVRVVFWSA-LHEAKR 245
BLAST of large subunit GTPase 1 homolog vs. Ensembl Sea Lamprey
Match: gnl2 (guanine nucleotide binding protein-like 2 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-040426-2317]) HSP 1 Score: 78.1814 bits (191), Expect = 3.093e-15 Identity = 55/197 (27.92%), Postives = 94/197 (47.72%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESF---EVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPR---DTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
T G ++ LL F + H +VG +GYPNVGKSS IN + +K V+ G TK +Q + + +++ DCPG+V PS ++ +++ G++ I+ I+ P + I E R D ++ Y I E + P + L ++ G + G P+ A+++L D+ GR+ + PP
Sbjct: 286 TKSFGKGALIQLLRQFGKLHIDKKH----ISVGFIGYPNVGKSSIINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYPS-GDTETEIVLKGVVQIEKIK---TPEDHIPEVLNRVKPDYIQKTYKI--------ESWSSP---EDFLEKMAFRMGKLLKGGEPDCQTVAKMVLNDFQRGRIPFFVKPP 463 HSP 2 Score: 49.6766 bits (117), Expect = 2.054e-6 Identity = 24/78 (30.77%), Postives = 44/78 (56.41%), Query Frame = 3
Query: 450 WRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++VI+ SD++IQV+DAR+P+ R +E Y+++ K + + NK DL+ + W E + F ++
Sbjct: 207 WGELYKVIDSSDVVIQVLDARDPMGTRSKHIEKYLRKEKPWKHLIFVFNKCDLVPTWVTQRWVAILSSEYPTLAFHAS 284
BLAST of large subunit GTPase 1 homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001200.1 (pep scaffold:Pmarinus_7.0:GL478700:12557:17182:-1 gene:ENSPMAG00000001073.1 transcript:ENSPMAT00000001200.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 49.6766 bits (117), Expect = 6.135e-7 Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 3
Query: 465 RVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIF 674
+V+ +D+++ V+DAR+PL RC LE V E K V L+NK DL+ E W + RE+ V+F
Sbjct: 146 QVLGLADVVLLVLDARDPLGCRCPQLEQTVLEA--GKPLVFLLNKIDLVPKDSAEKWLSFLGREHPTVLF 213
BLAST of large subunit GTPase 1 homolog vs. Ensembl Yeast
Match: LSG1 (Putative GTPase involved in 60S ribosomal subunit biogenesis; required for the release of Nmd3p from 60S subunits in the cytoplasm [Source:SGD;Acc:S000003067]) HSP 1 Score: 184.882 bits (468), Expect = 9.258e-51 Identity = 85/168 (50.60%), Postives = 121/168 (72.02%), Query Frame = 3
Query: 1107 VGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRP-PTAREVLSSYSYMHGMMTSK-GNPNLDRAARIILKDYVDGRLLYRHAPPNVD 1604
+GLVGYPNVGKSSTIN++ G KKVSVS+TPG TK FQT+ +++ + CDCPGLV P+ ++KG L+ +G+LPID +RDYI P ++AE+ P+ +E +YGI + E N PTA+E+L +Y+ G MT G+ + RA+R ILKDYV+G+LLY + PP+++
Sbjct: 339 IGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSDSVMLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPKYYIEAIYGIHIQTKSRDEGGNGDIPTAQELLVAYARARGYMTQGYGSADEPRASRYILKDYVNGKLLYVNPPPHLE 506 HSP 2 Score: 183.726 bits (465), Expect = 2.799e-50 Identity = 105/230 (45.65%), Postives = 146/230 (63.48%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTAIRVIN------DKDKEGILSQV------EKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEI-ENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEE--KRKMEKLSEIKESENEECDESG 764
++SV +ES L + S ALADKDFTA R N D + SQ ++ + +K L VPRRP+ M+K +L EKE FL WRR+LA + E+++ + LTP+E N++ W+QLWRV+ERSD+++Q+VDARNPLLFR VDLE YVKE D K N++L+NKADLLT KQR WA+YF +NI F+SA A + +++ E + +E + EE D+ G
Sbjct: 65 LRSVTQESALDEFLSTAALADKDFTADRHSNVKIIRMDSGNDSATSQGFSMTNEQRGNLNAKQRALAKDLIVPRRPEWNEGMSKFQLDRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKYFISKNISFTFYSALRANQLLEKQKEMGEDYREQDFEEADKEG 294
BLAST of large subunit GTPase 1 homolog vs. Ensembl Yeast
Match: NOG2 (Putative GTPase; associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation; recruited by ribosomal proteins L17, L35, and L37 to assembling ribosomes after 27SB pre-rRNA is generated, immediately preceding removal of ITS2 [Source:SGD;Acc:S000005336]) HSP 1 Score: 73.559 bits (179), Expect = 3.622e-14 Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRL 1574
T+ G ++ LL F + + + +VG +GYPN GKSS IN + +K V+ PG TK +Q + + +++ DCPG+V PS S+ ++ G++ ++ + I + ++ LE Y E+ +D A E + + G + G P+ ++ IL D+ G++
Sbjct: 291 TNSFGKGSLIQLLRQFSQLHT-DRKQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYIPGVLKRCQVKHLERTY-----EISGWKD------ATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKI 462 HSP 2 Score: 57.7658 bits (138), Expect = 3.169e-9 Identity = 26/78 (33.33%), Postives = 48/78 (61.54%), Query Frame = 3
Query: 450 WRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++VI+ SD++I V+DAR+PL RC +E Y+K+ +K + ++NK DL+ W ++ +E + F ++
Sbjct: 212 WNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHAS 289
BLAST of large subunit GTPase 1 homolog vs. Ensembl Yeast
Match: NUG1 (GTPase that associates with nuclear 60S pre-ribosomes; required for export of 60S ribosomal subunits from the nucleus [Source:SGD;Acc:S000000808]) HSP 1 Score: 67.781 bits (164), Expect = 2.303e-12 Identity = 55/198 (27.78%), Postives = 84/198 (42.42%), Query Frame = 3
Query: 1053 TLLESFEV--KNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATP-----GHTKRFQTLNITEKLTFCDCPGLVMP------SVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPR-----DTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMH-----GMMTSKGNPNLDRAARIILKDYVDGRLL 1577
LLES + N + VG++GYPNVGKSS INA+ R+ A P G T + + I KL D PG+ P S V + L + LP I D + ++ ++ + ++ + LY I P P + + + +H G + G PNL A +L D+ DG++L
Sbjct: 263 ALLESLKTYSNNSNLKRSIVVGVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREIKIDNKLKILDSPGICFPSENKKRSKVEHEAELALLNALPAKHIVDPYPAVLMLVKRLAKSDEMTESFKKLYEI----------PPIPANDADTFTKHFLIHVARKRGRLGKGGIPNLASAGLSVLNDWRDGKIL 450
BLAST of large subunit GTPase 1 homolog vs. Ensembl Nematostella
Match: EDO40984 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5J2]) HSP 1 Score: 209.92 bits (533), Expect = 2.012e-59 Identity = 98/179 (54.75%), Postives = 124/179 (69.27%), Query Frame = 3
Query: 1089 EAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSA 1625
E TT+GLVGYPNVGKSSTIN I KKV+VS+TPG TK FQTL ++ + CDCPGLV PS V +K ++V+GILPID +RD+I P + + PR LE +YGI + +GEDP+R P A E+L++Y YM G MTS G P+ R+AR ILKDYV+G+LLY PP D + FQ
Sbjct: 366 EDALTTIGLVGYPNVGKSSTINTILQSKKVAVSSTPGRTKHFQTLQLSPTVCLCDCPGLVFPSFVSTKAEMVVNGILPIDQMRDHIPP--YVCHRIPRLVLEGIYGINIASPAEGEDPDRAPYAHELLNAYGYMRGYMTSSGTPDCPRSARYILKDYVNGKLLYCTPPPGEDAVVFQEG 542 HSP 2 Score: 195.282 bits (495), Expect = 5.146e-54 Identity = 98/219 (44.75%), Postives = 146/219 (66.67%), Query Frame = 3
Query: 105 DRRKPMKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSEIKESENEE 749
D + + S+ E+SDL + + LA +FTA + + + G+LS+ + ++ + + +LL +PRRP+ + M+ EEL E+++F+ WRRQLA ++ + LTP+E NL+FWRQLWRVIERSD+++Q+VDARNP LFRC DL +YVKEV+ K N++LINKAD LT QR WAEY+ NI+V FWSA +AE +R E+ ++ E + E+
Sbjct: 43 DNKFTISSITEQSDLDEFLASAQLAGTEFTAEKLNVTFVTPQYDTGVLSEEKVTNIKQAQEDNRQLLRIPRRPEWNKSMSAEELDLKERDSFVEWRRQLAILQEKDHIILTPFEKNLEFWRQLWRVIERSDVIVQIVDARNPELFRCEDLAVYVKEVNPLKANLLLINKADYLTPSQRLKWAEYYKSRNIQVAFWSA-LAENERLSEEQTDSTEEKKEK 260
BLAST of large subunit GTPase 1 homolog vs. Ensembl Nematostella
Match: EDO38877 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBP5]) HSP 1 Score: 120.553 bits (301), Expect = 2.667e-29 Identity = 70/208 (33.65%), Postives = 115/208 (55.29%), Query Frame = 3
Query: 993 IGNLEVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKT-----TVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSK-GNPNLDRAARIILKDYVDGRLLYRHAPPN 1598
+G E++ + + G +D E+ HE +T T+G VG+ NVGKSS +N + G+K VSVS TPGHTK FQT+ +T + CDCPGLV PS+V + ++ SG+ PI +++ + +A ++P + L Q + D ++ + +A ++ +++ G MT+K ++ RAA IL+ VDG++ H PP
Sbjct: 147 VGPRELLAACSKLCGDKD--------EIDQVHEEVETNDALLTLGFVGHTNVGKSSLLNGLVGKKVVSVSRTPGHTKHFQTIFLTPSVRLCDCPGLVFPSLVDKQLQIL-SGLFPISQVQEPYTAVGYLAARWPLVHMLKLVLPQDLQEDDNKEVDHKWSAWDICEAWAERRGYMTAKAARRDVYRAANSILRLAVDGKVPMYHYPPG 345 HSP 2 Score: 67.3958 bits (163), Expect = 7.764e-12 Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 3
Query: 327 MTKEELFAAEKENFLNWRRQLAEI-ENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDR--ENIRVI-FWSAKIAEEKRKMEK 716
M+KE++ E++ F ++ L EI ++ K+ +L+ +E NL+ WRQLWRV+E SDI++ + D R+P L L YV + D K ++++NK DL++ + W YF E++ V+ F S AE +R E+
Sbjct: 1 MSKEQVENNERKEF---QKYLEEIYKHHKQSELSYFEHNLETWRQLWRVLEVSDIIVCLADIRHPALHFSPALYEYVLK-DLKKKFILVLNKVDLVSPELVTAWKCYFQSKYEHLSVVCFSSFPKAESERNKEQ 130
BLAST of large subunit GTPase 1 homolog vs. Ensembl Nematostella
Match: EDO41341 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4K1]) HSP 1 Score: 92.8189 bits (229), Expect = 7.853e-20 Identity = 54/191 (28.27%), Postives = 97/191 (50.79%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
T+ G ++ LL F K + + +VGL+GYPNVGKSS IN + +K V+ G TK +Q + + ++ DCPG+V P+ ++ +++ G++ ++ +++ I + E+ R+ L Y +Q + + L S G + G P+++ A++IL D+ G+L Y APP
Sbjct: 209 TNPFGKGALINLLRQFS-KLHSDKKQISVGLIGYPNVGKSSIINTLKAKKVCKVAPIAGETKVWQYITLMRRIYLVDCPGVVYPT-GDTETEIILKGVVRVENVKEAAEHIPTVLERVKREYLAKTYRVQAWD-----------DCTDFLEQVSRRSGKLLKGGEPDINTVAKMILNDFQRGKLPYFVAPP 386 HSP 2 Score: 54.6842 bits (130), Expect = 7.341e-8 Identity = 23/79 (29.11%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++V++ SD+++QV+DAR+PL R +E ++K+ +K + ++NK DL+ + W E+ + F ++
Sbjct: 129 IWNELYKVVDSSDVILQVLDARDPLGTRSKHIETFIKKEKSHKHLIFILNKCDLVPTWVTQQWVSVLSEEHPTLAFHAS 207
BLAST of large subunit GTPase 1 homolog vs. Ensembl Nematostella
Match: EDO46882 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNM6]) HSP 1 Score: 91.2781 bits (225), Expect = 1.100e-19 Identity = 58/209 (27.75%), Postives = 104/209 (49.76%), Query Frame = 3
Query: 1017 NSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEE 1643
+S+ +G E ++ LL ++ +N TVG+VG+PNVGKSS IN++ + +V ATPG TK Q + + + + D PG+VM S +++ + I+ I D I P+ I + + + Y + P+ KD + E L+ G + G P+++ A + +L+D+ G++ + PP + +AE+ E
Sbjct: 190 SSSSCLGAETLLKLLGNY-CRNKDIKTSITVGVVGFPNVGKSSIINSLKRSRTCTVGATPGVTKSMQEVQLDKHIKLLDSPGIVM-DTGDSDAAIILRNCVKIENIEDPIPPVEAILRRCNKQQVMEKYSV--PDYKD---------SNEFLTHLGKRLGKLKKGGVPDINAAGKTLLRDWNSGKIQFYTHPPEEHKLPTHISAEVVAE 385 HSP 2 Score: 54.299 bits (129), Expect = 9.186e-8 Identity = 26/79 (32.91%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++R+ +V+E +D++++V+DAR+P+ RC +E V K V+++NK DL+ E W +Y E VIF ++
Sbjct: 88 YYREFKKVVEAADVILEVLDARDPIGCRCPQVEQAVIAAGATKKLVLILNKIDLVPKDIAEKWLKYLRNEFPAVIFKAS 166
BLAST of large subunit GTPase 1 homolog vs. Ensembl Nematostella
Match: EDO31027 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZ44]) HSP 1 Score: 73.559 bits (179), Expect = 4.866e-14 Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 3
Query: 1017 NSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGED 1439
+S+ +G E ++ LL ++ +N TVG+VG+PNVGKSS IN++ + +V ATPG TK Q + + + + D PG+VM + S +++ + I+ I D I P+ I + + + Y + P+ KD +
Sbjct: 155 SSSSCLGAETLLKLLGNY-CRNKDIKTSITVGVVGFPNVGKSSIINSLKRSRTCTVGATPGVTKSMQEVQLDKHIKLLDSPGIVMDT-GDSDAAIILRNCVKIENIEDPIPPVEAILRRCNKQQVMEKYSV--PDYKDSNE 291 HSP 2 Score: 54.299 bits (129), Expect = 7.662e-8 Identity = 26/79 (32.91%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
++R+ +V+E +D++++V+DAR+P+ RC +E V K V+++NK DL+ E W +Y E VIF ++
Sbjct: 53 YYREFKKVVEAADVILEVLDARDPIGCRCPQVEQAVIAAGATKKLVLILNKIDLVPKDIAEKWLKYLRNEFPAVIFKAS 131
BLAST of large subunit GTPase 1 homolog vs. Ensembl Medaka
Match: lsg1 (large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:101163071]) HSP 1 Score: 215.698 bits (548), Expect = 3.314e-61 Identity = 103/205 (50.24%), Postives = 138/205 (67.32%), Query Frame = 3
Query: 1005 EVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQ 1619
E NS+ ++ ++++ + ++ + + TVGLVGYPNVGKSSTIN I KKVSVSATPGHTK FQTL + L CDCPGLVMPS V +K ++ SGILPID +RD++ I PR LE YGI + ++ EDP+RPPT+ E+L++Y YM G MTS G P+ R+AR ILKDYV+G+LL+ H PP++ +FQ
Sbjct: 312 ETFHNSSRLLHKDELLNIFKAAHKGPRCKEEQLTVGLVGYPNVGKSSTINTILRNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPMI-------PRHVLEGTYGINIIRPREDEDPDRPPTSEELLTAYGYMRGFMTSHGQPDQPRSARYILKDYVNGKLLFCHPPPHIKAEDFQ 509 HSP 2 Score: 201.06 bits (510), Expect = 8.066e-56 Identity = 97/199 (48.74%), Postives = 138/199 (69.35%), Query Frame = 3
Query: 120 MKSVLEESDLQKIFSLGALADKDFTA----IRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKR 704
++SV E+S + + LA +F A I + + + GIL + EK +K+ E L +PRRP + E L EK++FL WRR LA++E ++++ LTP+E NL+FWRQLWRVIERSDI++Q+VDARNPLLFRC DLE YVKEV +K+N++L+NKADLLT +QR++WA +F++E +R +FWSA +AE R
Sbjct: 50 LQSVTEQSSMDDFLATAELAGTEFVAEKLNIEFVPAEARAGILRKEEKIRLKKLHEENKHFLRIPRRPHWDESTSAEALQQDEKDSFLLWRRTLAKLEEEQKLILTPFEKNLEFWRQLWRVIERSDIVVQIVDARNPLLFRCADLESYVKEVSPDKVNMLLVNKADLLTREQRKVWARFFEKEGLRAVFWSA-LAEGNR 247
BLAST of large subunit GTPase 1 homolog vs. Ensembl Medaka
Match: gnl1 (G protein nucleolar 1 (putative) [Source:NCBI gene;Acc:101156846]) HSP 1 Score: 115.546 bits (288), Expect = 1.618e-26 Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 3
Query: 1086 HEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKD-------GEDPNRPPTAREVLSSYSYMHGMMTSKGNPN-LDRAARIILKDYVDGRLLYRHAPPN 1598
++ G T+G +G+PNVGKSS IN++ GRK VSVS TPGHTK FQT +T + CDCPGLV PS V+ + ++ SGI P+ ++D + + E+ P L +L ++ P ++D E+P TA +V +++ G T+K N + RAA +L+ +DGRL PP
Sbjct: 342 YKDGVLTLGCIGFPNVGKSSIINSLVGRKVVSVSRTPGHTKYFQTYYLTPTVKLCDCPGLVFPSRVNKELQIL-SGIYPVSQLQDPYTSVGYLCERTP--FLSVL-KLKHPSLQDEPQREQGAEEPKW--TAFDVCEAWAERRGYKTAKAARNDVYRAANSLLRLAIDGRLCLCLRPPG 514 HSP 2 Score: 72.7886 bits (177), Expect = 6.475e-13 Identity = 43/139 (30.94%), Postives = 75/139 (53.96%), Query Frame = 3
Query: 285 KLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRE--NIRVIFWSAKIAE 695
K LS PRRP MT++ L E++++ ++ + + L+ +E NL+ WRQLWRV+E SDI++ +VD R+P+L DL Y + D K ++++NK DL W Y + N+ ++ +++ +
Sbjct: 119 KCLSFPRRPSWTYNMTRDSLLKKEEKSYRDYLDDMHS--RNAPGTLSHFEHNLETWRQLWRVLEMSDIILLIVDIRHPVLQFPPDLYHYFTK-DLQKHVILVLNKVDLCPPPLVIAWKHYMASQFPNLNIVCFTSHPGQ 254
BLAST of large subunit GTPase 1 homolog vs. Ensembl Medaka
Match: gnl3l (guanine nucleotide-binding protein-like 3-like protein [Source:NCBI gene;Acc:101166045]) HSP 1 Score: 98.9821 bits (245), Expect = 2.377e-21 Identity = 61/209 (29.19%), Postives = 108/209 (51.67%), Query Frame = 3
Query: 1017 NSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEE 1643
+++ IG + ++ LL ++ +N TVG+VG+PNVGKSS IN++ + V ATPG TK Q +++ + + DCPG+VM + S +++ + I+ + D + P+ I + + + YG+ P+ + TA E L+ + G + G P+ D+AA+ +L D+ GR+ Y PP + +AE+ E
Sbjct: 217 STSACIGADCLMRLLGNY-CRNQDIKTAITVGVVGFPNVGKSSLINSLKRARACHVGATPGVTKCLQEVHLDKHIKLLDCPGIVMATST-SDAVMILRNCVKIEQLVDPLPPVEAILRRCNKVQIMEHYGV--PDFQ---------TAAEFLAMLARRQGKLRKGGLPDTDKAAKSVLMDWTGGRITYFTHPPETHTLPTHVSAEIVTE 412 HSP 2 Score: 58.9214 bits (141), Expect = 1.060e-8 Identity = 29/85 (34.12%), Postives = 52/85 (61.18%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEK 701
++R+ +V+E SD++++V+DAR+PL RC +E V + NK V+++NK DL++ + E W +Y E V F ++ + K
Sbjct: 115 YYREFKKVVEASDVILEVLDARDPLGCRCPQVEQAVIQSGTNKKIVLVLNKIDLVSKEIVEKWIKYLRNEFPTVAFKASTQQQAK 199
BLAST of large subunit GTPase 1 homolog vs. Ensembl Medaka
Match: gnl2 (G protein nucleolar 2 [Source:NCBI gene;Acc:101173497]) HSP 1 Score: 86.6557 bits (213), Expect = 2.902e-17 Identity = 52/192 (27.08%), Postives = 97/192 (50.52%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPN 1598
T+ G ++ LL F K + + +VG +GYPNVGKSS IN + +K +V+ G TK +Q + + ++ DCPG+V PS S+ +++ G++ ++ IR+ I + E+ + ++ Y ++P ED L ++ G + G P++ ++++L D+ GR+ + PP
Sbjct: 286 TNSFGKGSLIQLLRQFG-KLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPS-EDSESDIVLKGVVQVEKIRNPEDHIEAVLERAKPEYVQKTY--RIPSWNSTED---------FLEKLAFRTGKLLKGGEPDISTVSKMVLNDWQRGRIPFFVKPPG 464 HSP 2 Score: 51.9878 bits (123), Expect = 1.779e-6 Identity = 25/78 (32.05%), Postives = 46/78 (58.97%), Query Frame = 3
Query: 450 WRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++VI+ SD++IQV+DAR+P+ R +E Y+K+ K + ++NK DL+ + W +E + F ++
Sbjct: 207 WGELYKVIDSSDVIIQVLDARDPMGTRSKSIETYLKKEKPWKHLIFVLNKCDLIPTWVTKRWVAVLSQEYPTLAFHAS 284
BLAST of large subunit GTPase 1 homolog vs. Ensembl Medaka
Match: gnl2 (G protein nucleolar 2 [Source:NCBI gene;Acc:101173497]) HSP 1 Score: 86.6557 bits (213), Expect = 3.257e-17 Identity = 52/192 (27.08%), Postives = 97/192 (50.52%), Query Frame = 3
Query: 1023 TDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPN 1598
T+ G ++ LL F K + + +VG +GYPNVGKSS IN + +K +V+ G TK +Q + + ++ DCPG+V PS S+ +++ G++ ++ IR+ I + E+ + ++ Y ++P ED L ++ G + G P++ ++++L D+ GR+ + PP
Sbjct: 286 TNSFGKGSLIQLLRQFG-KLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPS-EDSESDIVLKGVVQVEKIRNPEDHIEAVLERAKPEYVQKTY--RIPSWNSTED---------FLEKLAFRTGKLLKGGEPDISTVSKMVLNDWQRGRIPFFVKPPG 464 HSP 2 Score: 52.373 bits (124), Expect = 1.559e-6 Identity = 25/79 (31.65%), Postives = 46/79 (58.23%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSA 683
W +L++VI+ SD++IQV+DAR+P+ R +E Y+K+ K + ++NK DL+ + W +E + F ++
Sbjct: 206 IWGELYKVIDSSDVIIQVLDARDPMGTRSKSIETYLKKEKPWKHLIFVLNKCDLIPTWVTKRWVAVLSQEYPTLAFHAS 284
BLAST of large subunit GTPase 1 homolog vs. Planmine SMEST
Match: SMESG000056113.1 (SMESG000056113.1) HSP 1 Score: 1136.71 bits (2939), Expect = 0.000e+0 Identity = 642/643 (99.84%), Postives = 643/643 (100.00%), Query Frame = 3
Query: 27 MSHKKSDLGQCLYKSRFGKSTKNIKIDRRKPMKSVLEESDLQKIFSLGALADKDFTAIRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSEIKESENEECDESGNLKAXXXXXXXXXXXXXXXXXXKCVXXXXXXXXXXXXXXXXXXXXXXXXGMNSDCFXXXXXXXXXXXXXXXXXXXIIGNLEVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEXXXXXXXXXXXXXXXLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLDQHNYVYF 1955
MSHKKSDLGQCLYKSRFGKSTKNIKIDRRKPMKSVLEESDLQKIFSLGALADKDFTAIRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSEIKESENEECDESGNLKAEI+EIDDVEEIEDSENEIKCVDSSDDKIESEREEESEDQNEANENGMNSDCFSEESFLMSESEEDSPEENEIIGNLEVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEKRFKNKPKPSGKKGKLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLDQHNYVYF
Sbjct: 1 MSHKKSDLGQCLYKSRFGKSTKNIKIDRRKPMKSVLEESDLQKIFSLGALADKDFTAIRVINDKDKEGILSQVEKKMFEKVKSEYSKLLSVPRRPKGARFMTKEELFAAEKENFLNWRRQLAEIENDKRVKLTPYELNLDFWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWSAKIAEEKRKMEKLSEIKESENEECDESGNLKAEIKEIDDVEEIEDSENEIKCVDSSDDKIESEREEESEDQNEANENGMNSDCFSEESFLMSESEEDSPEENEIIGNLEVIKNSTDMIGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVDPIEFQSAAELPEEKRFKNKPKPSGKKGKLTELNPEIPISDETVNSIKGPNLLKIKRSATRDGMKRLTLKDESLVIESDLDSNATNPIKPWRQINKRGTKEKMRNKYSSLDQHNYVYF 643
BLAST of large subunit GTPase 1 homolog vs. Planmine SMEST
Match: SMESG000026847.1 (SMESG000026847.1) HSP 1 Score: 77.411 bits (189), Expect = 1.471e-14 Identity = 53/194 (27.32%), Postives = 93/194 (47.94%), Query Frame = 3
Query: 1032 IGVEDIVTLLESFEVKNPHEAGKTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVH--SKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPT-AREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPPNVD 1604
+G + +V LL K + + +VG++G+PN GKSS IN + G K V+ G TK +Q +++ + + DCPG V S+ L++ + ++ + D I + + R+ ++ LY I NRP + + E L + G + G P++ A+ +LKD+ G+L + PP D
Sbjct: 273 LGKDRLVGLLRQIRDK-MKDRRQISVGIIGFPNTGKSSLINTLKGEKVCKVAPIAGETKVWQYISLMKSIDLIDCPGTVTSEKDDKLSETDLILRNSIRVEKVEDADRHIPALLQIVNREVVDKLYKI-----------NRPYSCSEEFLEMVARNRGRLLKGGQPDILTVAKEMLKDFNSGKLAWYVKPPTYD 454 HSP 2 Score: 57.7658 bits (138), Expect = 1.980e-8 Identity = 26/78 (33.33%), Postives = 50/78 (64.10%), Query Frame = 3
Query: 447 FWRQLWRVIERSDILIQVVDARNPLLFRCVDLELYVKEVDKNKINVILINKADLLTAKQREIWAEYFDRENIRVIFWS 680
W+++++VI+ SD+L+ V+DARNP+ R +EL ++ +K K + ++NK DLL A+ W ++E ++F++
Sbjct: 192 IWQEVYKVIDSSDVLLYVLDARNPMGMRSAKIELDIR--NKQKKLIFILNKVDLLPARVTRHWERELNKEYPTIMFYA 267
BLAST of large subunit GTPase 1 homolog vs. Planmine SMEST
Match: SMESG000075369.1 (SMESG000075369.1) HSP 1 Score: 72.4034 bits (176), Expect = 2.779e-13 Identity = 55/200 (27.50%), Postives = 90/200 (45.00%), Query Frame = 3
Query: 1014 KNST-DMIGVEDIVTLLESFEVKNPHEAG-----KTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
KNST GV++++ ++S P AG K VG+ G PN GKSS IN+I ++ G T+ Q + + D PG+++ + + L ++ I D +A I + R L++LY +LPE T E + +++ + G PNL AA ++KD+ G++ Y PP
Sbjct: 158 KNSTCASYGVDNLINYIKSLNKNTPGAAGTKSADKLIVGIAGVPNTGKSSVINSIKRKRICEAGNLAGLTRNLQHVAHDNHIVLIDSPGIILAQ-SNDPAEYALRNCLRVEKIEDPVAVAEAIYNRCQRIQLQVLY--KLPEFD---------TITEFMVAFASRMCPLKKGGIPNLKLAAIKLIKDWNSGKISYCSEPP 345
BLAST of large subunit GTPase 1 homolog vs. Planmine SMEST
Match: SMESG000075369.1 (SMESG000075369.1) HSP 1 Score: 72.4034 bits (176), Expect = 3.082e-13 Identity = 55/200 (27.50%), Postives = 90/200 (45.00%), Query Frame = 3
Query: 1014 KNST-DMIGVEDIVTLLESFEVKNPHEAG-----KTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
KNST GV++++ ++S P AG K VG+ G PN GKSS IN+I ++ G T+ Q + + D PG+++ + + L ++ I D +A I + R L++LY +LPE T E + +++ + G PNL AA ++KD+ G++ Y PP
Sbjct: 154 KNSTCASYGVDNLINYIKSLNKNTPGAAGTKSADKLIVGIAGVPNTGKSSVINSIKRKRICEAGNLAGLTRNLQHVAHDNHIVLIDSPGIILAQ-SNDPAEYALRNCLRVEKIEDPVAVAEAIYNRCQRIQLQVLY--KLPEFD---------TITEFMVAFASRMCPLKKGGIPNLKLAAIKLIKDWNSGKISYCSEPP 341
BLAST of large subunit GTPase 1 homolog vs. Planmine SMEST
Match: SMESG000075369.1 (SMESG000075369.1) HSP 1 Score: 72.0182 bits (175), Expect = 5.351e-13 Identity = 55/200 (27.50%), Postives = 90/200 (45.00%), Query Frame = 3
Query: 1014 KNST-DMIGVEDIVTLLESFEVKNPHEAG-----KTTVGLVGYPNVGKSSTINAIFGRKKVSVSATPGHTKRFQTLNITEKLTFCDCPGLVMPSVVHSKGHLMVSGILPIDTIRDYIAPINIIAEQFPRDTLELLYGIQLPEVKDGEDPNRPPTAREVLSSYSYMHGMMTSKGNPNLDRAARIILKDYVDGRLLYRHAPP 1595
KNST GV++++ ++S P AG K VG+ G PN GKSS IN+I ++ G T+ Q + + D PG+++ + + L ++ I D +A I + R L++LY +LPE T E + +++ + G PNL AA ++KD+ G++ Y PP
Sbjct: 204 KNSTCASYGVDNLINYIKSLNKNTPGAAGTKSADKLIVGIAGVPNTGKSSVINSIKRKRICEAGNLAGLTRNLQHVAHDNHIVLIDSPGIILAQ-SNDPAEYALRNCLRVEKIEDPVAVAEAIYNRCQRIQLQVLY--KLPEFD---------TITEFMVAFASRMCPLKKGGIPNLKLAAIKLIKDWNSGKISYCSEPP 391 The following BLAST results are available for this feature:
BLAST of large subunit GTPase 1 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of large subunit GTPase 1 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of large subunit GTPase 1 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of large subunit GTPase 1 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035812 ID=SMED30035812|Name=large subunit GTPase 1 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1985bpback to top protein sequence of SMED30035812-orf-1 >SMED30035812-orf-1 ID=SMED30035812-orf-1|Name=SMED30035812-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=644bp MSHKKSDLGQCLYKSRFGKSTKNIKIDRRKPMKSVLEESDLQKIFSLGALback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|
