Poly(RC)-binding protein 3
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035570 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 216.853 bits (551), Expect = 2.841e-64 Identity = 126/321 (39.25%), Postives = 184/321 (57.32%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 360 HSP 2 Score: 51.2174 bits (121), Expect = 3.793e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 213.772 bits (543), Expect = 3.991e-63 Identity = 128/347 (36.89%), Postives = 192/347 (55.33%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS------SSYYTVKLQG----PISHFIPNLSNDSLIKSSTTNHFTQQNII--------------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P + L S+ QN++ E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLS------LLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE---AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 351 HSP 2 Score: 51.2174 bits (121), Expect = 3.069e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 213.772 bits (543), Expect = 3.991e-63 Identity = 128/347 (36.89%), Postives = 192/347 (55.33%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS------SSYYTVKLQG----PISHFIPNLSNDSLIKSSTTNHFTQQNII--------------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P + L S+ QN++ E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLS------LLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE---AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 351 HSP 2 Score: 51.2174 bits (121), Expect = 3.069e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 212.231 bits (539), Expect = 1.465e-62 Identity = 126/322 (39.13%), Postives = 184/322 (57.14%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361 HSP 2 Score: 51.2174 bits (121), Expect = 3.738e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 211.46 bits (537), Expect = 2.163e-62 Identity = 125/322 (38.82%), Postives = 181/322 (56.21%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL--------------GQTNPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 341 HSP 2 Score: 51.2174 bits (121), Expect = 3.512e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: pes-4 (Patterned Expression Site [Source:UniProtKB/TrEMBL;Acc:Q95Y67]) HSP 1 Score: 157.918 bits (398), Expect = 3.298e-42 Identity = 84/183 (45.90%), Postives = 120/183 (65.57%), Query Frame = 2 Query: 371 STNPKNSSEN----CLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK 907 S +P+ +S + L+IR+LM GKEVGSIIGK+GD IKK REES A+INISDG+ PERIVTI+GT I A ++C KFE D L S+ P+++R+++ A Q +++G GG +IK ++E T A+I E L S+ER +TLSGT+D++ C+ ++C+I LE + Y PK Sbjct: 57 SCSPRETSPSTTSLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKFEEDMLL-LPNSVPKP--PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPK 236
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 86.2705 bits (212), Expect = 5.753e-18 Identity = 50/167 (29.94%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSP 904 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER+ T++ + + +K + + E++F S P +R+L+ ++G G +IK+L+E A + S++R+L SG +V I E+ K EI PY P Sbjct: 33 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNF---------SERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLP 190 HSP 2 Score: 50.8322 bits (120), Expect = 1.680e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 440 GSIIGKRGDNIKKFREESMARINISDGNS-PERIVTISGTSRQIHYAMKLI 589 G+IIG+ G+ I + R+ES A+I + N PERI+TI GT +QIH A L+ Sbjct: 312 GTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLL 362
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 86.2705 bits (212), Expect = 5.753e-18 Identity = 50/167 (29.94%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSP 904 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER+ T++ + + +K + + E++F S P +R+L+ ++G G +IK+L+E A + S++R+L SG +V I E+ K EI PY P Sbjct: 33 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNF---------SERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLP 190 HSP 2 Score: 50.8322 bits (120), Expect = 1.680e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 440 GSIIGKRGDNIKKFREESMARINISDGNS-PERIVTISGTSRQIHYAMKLI 589 G+IIG+ G+ I + R+ES A+I + N PERI+TI GT +QIH A L+ Sbjct: 312 GTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLL 362
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 86.6557 bits (213), Expect = 5.886e-18 Identity = 50/167 (29.94%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSP 904 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER+ T++ + + +K + + E++F S P +R+L+ ++G G +IK+L+E A + S++R+L SG +V I E+ K EI PY P Sbjct: 50 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNF---------SERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLP 207 HSP 2 Score: 50.8322 bits (120), Expect = 1.722e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 440 GSIIGKRGDNIKKFREESMARINISDGNS-PERIVTISGTSRQIHYAMKLI 589 G+IIG+ G+ I + R+ES A+I + N PERI+TI GT +QIH A L+ Sbjct: 329 GTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLL 379
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 51.2174 bits (121), Expect = 4.285e-8 Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPER 535 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER Sbjct: 50 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPER 93
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0111017) HSP 1 Score: 202.216 bits (513), Expect = 2.431e-57 Identity = 130/335 (38.81%), Postives = 192/335 (57.31%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTV--KLQGPISH--FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTL 1387 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ++ + + + IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC + LE +PY PK P G I N + T N ++ T + PL ++ + + G I+H + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN S++L K L Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFE-EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0304981) HSP 1 Score: 196.438 bits (498), Expect = 5.414e-57 Identity = 131/338 (38.76%), Postives = 192/338 (56.80%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFE--NDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTV--KLQGPISH-FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1393 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ND K + + +P IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC + LE +PY PK P G I N + T N ++ T + PL ++ + + G I+H + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN + + L + Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEFNDVGK-----VGKTQIP--IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGLPI 342
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0333222) HSP 1 Score: 196.438 bits (498), Expect = 5.414e-57 Identity = 131/338 (38.76%), Postives = 192/338 (56.80%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFE--NDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTV--KLQGPISH-FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1393 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ND K + + +P IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC + LE +PY PK P G I N + T N ++ T + PL ++ + + G I+H + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN + + L + Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEFNDVGK-----VGKTQIP--IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGLPI 342
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0078470) HSP 1 Score: 195.282 bits (495), Expect = 1.672e-56 Identity = 127/337 (37.69%), Postives = 190/337 (56.38%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTV--KLQGPISH--FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1393 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ++ + + + IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC + LE +PY PK P G I N + T N ++ T + PL ++ + + G I+H + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN + + L + Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFE-EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGLPI 347
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0304983) HSP 1 Score: 197.978 bits (502), Expect = 9.947e-56 Identity = 133/341 (39.00%), Postives = 193/341 (56.60%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFE--NDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS--------SSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTL 1387 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ND K + + +P IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC + LE +PY PK P G I N + T N ++ T + PL ++ + +S + G + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN S++L K L Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEFNDVGK-----VGKTQIP--IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 213.001 bits (541), Expect = 2.990e-63 Identity = 124/334 (37.13%), Postives = 188/334 (56.29%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARL 334 HSP 2 Score: 51.9878 bits (123), Expect = 1.065e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 212.616 bits (540), Expect = 4.796e-63 Identity = 123/335 (36.72%), Postives = 188/335 (56.12%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 9.875e-7 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 212.616 bits (540), Expect = 4.796e-63 Identity = 123/335 (36.72%), Postives = 188/335 (56.12%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 9.875e-7 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 212.616 bits (540), Expect = 4.796e-63 Identity = 123/335 (36.72%), Postives = 188/335 (56.12%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 9.875e-7 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp2 (poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]) HSP 1 Score: 204.527 bits (519), Expect = 2.200e-60 Identity = 119/321 (37.07%), Postives = 181/321 (56.39%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I +K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC + LE +PY PK + + + + P + LA P PL SS +T + + T +H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP-FPLAP--SSQGFTAGMDA---------------SAQTGSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSPASISLAEYLINARL 308
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: ENSXETT00000046760.1 (poly(rC) binding protein 3 [Source:NCBI gene;Acc:100490531]) HSP 1 Score: 216.468 bits (550), Expect = 2.626e-64 Identity = 127/345 (36.81%), Postives = 190/345 (55.07%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDS-----------LIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P + L+ S + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+++ +G ER+I+I GS ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQVRADPLGASTANLS------LLLQHQPLPAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLINARL 352 HSP 2 Score: 50.8322 bits (120), Expect = 3.635e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: ENSXETT00000046774.1 (poly(rC) binding protein 3 [Source:NCBI gene;Acc:100490531]) HSP 1 Score: 215.698 bits (548), Expect = 3.050e-64 Identity = 125/334 (37.43%), Postives = 188/334 (56.29%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+++ +G ER+I+I GS ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQVRADPLGASTANLS------LLLQHQPLPAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGMDASSQASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLINARL 332 HSP 2 Score: 50.8322 bits (120), Expect = 3.282e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: pcbp2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:733863]) HSP 1 Score: 215.312 bits (547), Expect = 1.431e-62 Identity = 136/376 (36.17%), Postives = 211/376 (56.12%), Query Frame = 2 Query: 368 ESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHL--PYTDVGSAIAINT--CNTSNKMI------SPTFS---------DNMSLATNSLPILPL-----QNIYS--SSYYTVKLQG----PISHFIPNLSN-DSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSV 1402 ++ P+ L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+G+ PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK P G + T + N + +P F+ ++S A + +L L Q++ S + + + +Q P+ P D+ S T++H E + N++IGCIIGR GS INEIR +SGAQIKI+N+ +G ER+++I GS ++ AQ LIN+SL++ K + + SV Sbjct: 5 DANAPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAIQGQYAIPHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHTPFTPLGQTTPGFPGLDA--TSPTSSH--------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITGSPANISLAQYLINASLEMAKLSTQTASV 370
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: cert1 (ceramide transporter 1 [Source:Xenbase;Acc:XB-GENE-1002414]) HSP 1 Score: 206.068 bits (523), Expect = 9.790e-61 Identity = 125/328 (38.11%), Postives = 191/328 (58.23%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPI-------LPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILIN 1357 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC + LE +PY PK P G +++ NT M+S T +++ + P+ +NIY Y +V ++G D+ + TT+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSLFM-NTGCCMVSDLTKLHQLAMQQSHFPMSHSGNTGFSGKNIY---YDSVAIRGQWGGI------DA--SAQTTSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLIN 321
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: cert1 (ceramide transporter 1 [Source:Xenbase;Acc:XB-GENE-1002414]) HSP 1 Score: 209.149 bits (531), Expect = 2.155e-60 Identity = 126/338 (37.28%), Postives = 193/338 (57.10%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAI----NTCNTSNKMISPTFSDNMSL-ATNSLPILPLQNIYS------SSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYK 1378 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC + LE +PY PK P G ++ + C T + + +SL A + +Q Y+ + + + +Q SHF +S+ S + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN SL+ K Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQ--SHF--PMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVSLETAK 347
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp3 (poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]) HSP 1 Score: 216.468 bits (550), Expect = 3.158e-64 Identity = 126/321 (39.25%), Postives = 184/321 (57.32%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 360 HSP 2 Score: 50.8322 bits (120), Expect = 2.946e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp3 (poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]) HSP 1 Score: 211.846 bits (538), Expect = 1.661e-62 Identity = 126/322 (39.13%), Postives = 184/322 (57.14%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361 HSP 2 Score: 50.8322 bits (120), Expect = 2.902e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp3 (poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]) HSP 1 Score: 211.846 bits (538), Expect = 1.661e-62 Identity = 126/322 (39.13%), Postives = 184/322 (57.14%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361 HSP 2 Score: 50.8322 bits (120), Expect = 2.902e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp2 (poly(rC) binding protein 2 [Source:MGI Symbol;Acc:MGI:108202]) HSP 1 Score: 209.149 bits (531), Expect = 8.234e-62 Identity = 124/334 (37.13%), Postives = 189/334 (56.59%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKM--ISPTFSDNMSLATNSLPILPLQNIYS------SSYYTVKLQG---PISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC + LE +PY PK P G +T + S +P+ N L L +Q Y+ + + + +Q P++H S + TT+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 339
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp2 (poly(rC) binding protein 2 [Source:MGI Symbol;Acc:MGI:108202]) HSP 1 Score: 206.453 bits (524), Expect = 1.435e-60 Identity = 127/340 (37.35%), Postives = 191/340 (56.18%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKM--ISPTFSDNMSLATNSLPILPLQNIYS------SSYYTVKLQGPISHFIPNLSND--SLIKSSTTN-------HFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC + LE +PY PK P G +T + S +P+ N L L +Q Y+ + + + +Q SHF N S I+SS+ + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ--QSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 351
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|P57721|PCBP3_HUMAN (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 7.033e-62 Identity = 126/322 (39.13%), Postives = 184/322 (57.14%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|P57722|PCBP3_MOUSE (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 1.162e-61 Identity = 126/322 (39.13%), Postives = 184/322 (57.14%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC + LE +PY PK + + T + P + LA P PL + ++ KL S NL S ++ T E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH-----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|Q61990|PCBP2_MOUSE (Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.650e-59 Identity = 127/341 (37.24%), Postives = 191/341 (56.01%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKM--ISPTFSDNMSLATNSLPILPLQNIYS------SSYYTVKLQGPISHFIPNLSND--SLIKSSTTN--------HFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC + LE +PY PK P G +T + S +P+ N L L +Q Y+ + + + +Q SHF N S I+SS+ + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ--QSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 352
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|Q15366|PCBP2_HUMAN (Poly(rC)-binding protein 2 OS=Homo sapiens OX=9606 GN=PCBP2 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.890e-59 Identity = 129/344 (37.50%), Postives = 194/344 (56.40%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLE-ISNCP---YVLPYSPK--HLPYTDVGSAIAINTCNTSNKM--ISPTFSDNMSLATNSLPILPLQNIYS------SSYYTVKLQGPISHFIPNLSND--SLIKSSTTN-------HFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC + LE +S P +PY PK P G +T + S +P+ N L L +Q Y+ + + + +Q SHF N S I+SS+ + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ--QSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 355
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|O19048|PCBP1_RABIT (Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus OX=9986 GN=PCBP1 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.807e-56 Identity = 125/348 (35.92%), Postives = 190/348 (54.60%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLE-ISNCP----YVLPYSPKHLPYTD-VGSAIAINTC-------NTSNKMISP---TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQG-----PISHFIPNLSN--DSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYK 1378 L+IR+LM GKEVGSIIGK+G+++K+ REES ARINIS+GN PERI+T++G + I A +I K E D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G SV C+ +IC + LE +S P +PY P +P + V A + C + ++ + P +S + L + L + + + G I P + SL S+ T H E + N +IGCIIGR G+ INEIR +SGAQIKI+N +G R+++I GS S+ AQ LIN+ L K Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP--MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTH--------ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 351
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A1I8GAN3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.516e-73 Identity = 147/370 (39.73%), Postives = 215/370 (58.11%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILP-LQNIYSSSYYTVKLQGPIS--HFIPN---------LSNDSLIKSSTTNHFTQQNII-------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1393 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C I L+ +PY PK + T V SA A + P MS +P +P + S + P++ + N L + +L T + Q +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++S+ L+K L L Sbjct: 125 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAGPLMQPPMS--GPPIPFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASLALGHPALAGPGLTPARSHQGPAPPAPTNTQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISASIDLHKHLLAL 492
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A1I8J6A4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.681e-71 Identity = 146/379 (38.52%), Postives = 214/379 (56.46%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLE------------ISNCPYVL----------------------PYSPKHLPYT-DVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1393 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C I L+ C P S +P+ ++ A+ +++ SP D + LA LP L + + L GP P S+ + TN +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++S+ L+K L L Sbjct: 26 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDAQAGHAHYADSPAQRCALRRSRSSCCRRGRCAAAARRPLMQPPMSGPPIPFMPEMSKAVPVSSVGL--PFTSPLTGDAL-LANGCLPAASLALGHPA------LAGP--GLTPARSHQGPAPPAPTN-------TQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISASIDLHKHLLAL 386
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A267EEB3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig015157g1 PE=4 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 1.881e-70 Identity = 142/367 (38.69%), Postives = 209/367 (56.95%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLA--------TNSLPI----LPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNII-------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQT 1384 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C I L+ +PY PK + T V SA A + P MS + ++P+ LP + + P + L + +L T + Q +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++ K + Sbjct: 93 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHSAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAGPLMQPPMSGPPIAFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASL--ALGHPALAGPGLTPARSHQGPAPPAPTNTQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISARCHRQKSS 457
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A267G057 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig015157g2 PE=4 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 2.370e-70 Identity = 144/360 (40.00%), Postives = 209/360 (58.06%), Query Frame = 2 Query: 407 SIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPL--QNIYSSSY---YTVKLQG---------PISHFIPNLSNDSLIKSSTTNHFTQQNII-------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1360 +IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C I L+ +PY PK + T V SA A + P MS +P +P + + SS +T L G P + L + +L T + Q +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++ Sbjct: 94 TIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAGPLMQPPMS--GPPIPFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASL--ALGHPALAGPGLTPARSHQGPAPPAPTNTQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISA 449
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: T1KBT5 (Uncharacterized protein OS=Tetranychus urticae OX=32264 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 2.555e-69 Identity = 142/337 (42.14%), Postives = 204/337 (60.53%), Query Frame = 2 Query: 362 IIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKS-STTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 I++S P + L+IR++M GKEVGSIIGK+GDNIKKFREES A+INISDG+ PERIVT++G++ I A LI +KFE + +P K +S P+++R+++ A Q +++G GG +IK+++E+T ATI E L S+ER +T+SG SDS+ CI +IC + +E +PY PK + + T + P + LA P+LP N+ TV Q + L+ S I+ + T T E + N++IGCIIG+GG+ INEIR +SGA IKISNSE+G +ER +SI G+ +S+ AQ LINSS+Q Sbjct: 5 IVDSNKPLDGPSVTLTIRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTESILKAFSLIGRKFE-EIHEPW-KDGQSGTNPVTLRLIVPASQCGSLIGKGGAKIKEIREITGATIQVASEMLPNSTERAVTISGNSDSITKCIYQICCVLMESPAKGATIPYRPKPAMPPVIFAGGQAYTLQGQYAIPHPDLTKLHQLALQHAPLLPGHNV-----GTVNPQA-----LATLTATSSIRPVAATTLATTGAATTEMAIPNDLIGCIIGKGGAKINEIRQLSGASIKISNSEEGSKERTVSITGTPESINLAQYLINSSIQ 329
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: pcbp3 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:103036377]) HSP 1 Score: 213.001 bits (541), Expect = 2.285e-63 Identity = 123/335 (36.72%), Postives = 188/335 (56.12%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYS-------SSYYTVKLQ----GPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK P G + + S +S + L LP +Q Y+ + + + +Q P+ P ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESAARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 51.9878 bits (123), Expect = 8.518e-7 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: pcbp2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:103045736]) HSP 1 Score: 203.756 bits (517), Expect = 3.419e-60 Identity = 119/321 (37.07%), Postives = 180/321 (56.07%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC + LE +PY PK + + + + P + LA P PL SS +T + + T +H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP-FPLAP--SSQGFTAGMDA---------------SAQTGSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLINARL 308
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: ENSAMXT00000036233.1 (poly(rC)-binding protein 2-like [Source:NCBI gene;Acc:103032686]) HSP 1 Score: 201.445 bits (511), Expect = 2.686e-59 Identity = 119/321 (37.07%), Postives = 181/321 (56.39%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM KEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++RI++ A Q +++G GG +IK+++ELT A + + L S+ER +T++GT S+ C+ +IC + LE +PY PK + + + + P + LA P Q I S+ +T + ++ T+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHSKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSISNSPGSSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRELTGAQVQVAGDMLPNSTERAITIAGTIQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP---FQQIPSNQGFTTTMDA----------------AAQTSH--------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSAASISLAEYLINARL 307
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: ENSAMXT00000043675.1 (poly(rC)-binding protein 2-like [Source:NCBI gene;Acc:103032686]) HSP 1 Score: 202.986 bits (515), Expect = 2.119e-58 Identity = 118/319 (36.99%), Postives = 180/319 (56.43%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1360 L+IR+LM KEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++RI++ A Q +++G GG +IK+++ELT A + + L S+ER +T++GT S+ C+ +IC + LE +PY PK + + + + P + LA P Q I S+ +T + ++ T+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ Sbjct: 14 LTIRLLMHSKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSISNSPGSSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRELTGAQVQVAGDMLPNSTERAITIAGTIQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP---FQQIPSNQGFTTTMDA----------------AAQTSH--------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSAASISLAEYLINA 305
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: ENSAMXT00000017359.2 (poly(rC)-binding protein 2-like [Source:NCBI gene;Acc:103032686]) HSP 1 Score: 197.593 bits (501), Expect = 4.052e-58 Identity = 122/332 (36.75%), Postives = 185/332 (55.72%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPIL--PLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1393 L+IR+LM KEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++RI++ A Q +++G GG +IK+++ELT A + + L S+ER +T++GT S+ C+ +IC + LE +PY PK GS + F+ + L + P Q I S+ +T + ++ T+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+S + L+L Sbjct: 14 LTIRLLMHSKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSISNSPGSSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRELTGAQVQVAGDMLPNSTERAITIAGTIQSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQLTKLHQLAMQQSPFQQIPSNQGFTTTMDA----------------AAQTSH--------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSAASISLAEYLINASSESVGGVLEL 302
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005114.1 (pep scaffold:Pmarinus_7.0:GL476545:177182:183416:1 gene:ENSPMAG00000004551.1 transcript:ENSPMAT00000005114.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 194.512 bits (493), Expect = 5.303e-57 Identity = 121/323 (37.46%), Postives = 176/323 (54.49%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAIN----TCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1360 LSIR+LM KEVGSIIGK+G+ +K+ REES ARINISD N PERIVT++G I A LI K E D L + S P+++R+++ A Q +++G G +I++L+E T A + + L S+ER +T+SGT D++ C+ +IC + +E +PY PK P + I T + +P + LA P P+ N SS Y P + D+ + ST E + N +IGCIIG+ G+ INEIR +SGAQIKI+++ DG +R++ I GS ++ AQ LIN+ Sbjct: 16 LSIRLLMHSKEVGSIIGKKGEFVKRVREESGARINISDANCPERIVTVTGPMESIFLAFALITHKLEEDMGSTLSGGVMMSRPPVTLRLVVPASQCGSLIGKSGNKIQELRESTGAQVQVAGDLLPNSTERAVTISGTPDAIVQCVRQICVLMMESPPKGATIPYRPK--PVSSSAPVIFAGGQAYTIQGQYAIPNPDLTKLHQLAMQHTPFTPI-NQASSGYQAT----------PGV--DASAQMST----------HEISIPNNLIGCIIGKQGTKINEIRQMSGAQIKIASAIDGATDRQVIITGSPANISLAQYLINA 313
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005105.1 (pep scaffold:Pmarinus_7.0:GL501087:1205:15413:-1 gene:ENSPMAG00000004637.1 transcript:ENSPMAT00000005105.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 151.754 bits (382), Expect = 3.803e-43 Identity = 75/168 (44.64%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPK 907 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+G+ PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SG +++ C+ +IC I LE +PY PK Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGQTDAIFKAFSMITNKFEEDINASMANSAVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTVSGAPEAIIQCVKQICVIMLESPPKGATIPYRPK 181
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: zgc:110045 (zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]) HSP 1 Score: 103.605 bits (257), Expect = 1.270e-26 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKE 739 L+IR+LM KEVGSIIGK+GD +K+ R+ES +RINISDGN PERIVT++G + I A ++ K E D + S+ + P+++R+++ A Q +++G G +IK+L+E Sbjct: 17 LTIRLLMHSKEVGSIIGKKGDFVKRIRDESGSRINISDGNCPERIVTVTGPTEAIFRAFTMMTHKLEEDMISTMANSVVMNRPPVTLRLVVPASQCGSLIGKSGNKIKELRE 128
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: hdlbpb (high density lipoprotein binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6822]) HSP 1 Score: 58.151 bits (139), Expect = 4.021e-9 Identity = 76/325 (23.38%), Postives = 138/325 (42.46%), Query Frame = 2 Query: 395 ENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARI-NISDGNSPERIVTISGTSRQIH----YAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGP---ISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQ 1345 EN + +++ K +IIG++G+ IK+ RE+ + I N D IV + G ++ + KL+ + EN+++ +S+ I Q ++NI+G GG IKK++E T+ I E S+ ++ ++G ++ I E++N P L + +G+ +++ + + + P + S V ++GP + L L + N FT E E +IGRGG+ I ++R +GA+I S+D QE I+I G D+V+ A+ Sbjct: 506 ENERTKDLIIEHKLHRAIIGQKGERIKEVREKFLEVIINFPDPAQKSDIVQLRGPKNEVEKCAKFMAKLVAELIENNYS-------------ISVPIFKQF--HKNIIGKGGANIKKIREETNTKIDLPTE---NSNSEMIVITGKKAHCEAAREKVLAIQKELANIKEADVTIPAKLHNSLIGA---------KGRLVRAIMEECGGVHIH----FPSE---GSGSDKVTIRGPQPEVDRACKQLMQ--LAEEKQVNSFTI-----EVRAKPEYHRFLIGRGGANIRKVRDKTGARIVFPASDDKDQEL-ITIIGKEDAVKDAE 788
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: IGF2BP3 (insulin like growth factor 2 mRNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:28868]) HSP 1 Score: 56.6102 bits (135), Expect = 1.023e-8 Identity = 84/354 (23.73%), Postives = 149/354 (42.09%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINI---SDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFG-MEFLTA-SSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFI--PNLSNDSLIKSSTTNHFTQQNIIKE-----FFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSE--DGKQERKISICGSYDSVQTAQILINSSLQ---LY--KQTLKLKSVMK 1408 + +RIL+ + VG+IIGK G I+ +++ +++++ + S E+ +TI A CK K + +PL +IL ++G G +KK+++ T+ I ++ LT + ER +T+ G+ ++ + EI K E Y + +A+ N +I + + L S+P +P +S + P F P+ + S T Q E F+ + +G IIG+ G I +I +GA IKI+ E D K ER ++I G ++ AQ I L+ Y K+ +KL++ +K Sbjct: 123 IPLRILVPSQFVGAIIGKEGATIRSITQQTQSKVDVHRKENAGSAEKPITIQSAPDGCTAA----CKMIMEIMLKEAQDTKSGEDVPL--KILAHNNFVGRLIGKEGRNLKKIEQDTETKITISPLQDLTLYNPERTITVRGSVEATSKAEGEIMKRLREA---------------YENDLAAM-----NQQGNLIPGLNLNAVGLFPPSMPGMP------ASSGPRAMNTPYMPFASHPSFVGGAYGTSGVTPAVAQPAAQTEQETVFLFIPTQSVGAIIGKKGQNIKQISRFAGASIKIAPPETPDAK-ERMVTITGPAEAQFKAQGRIYGKLKEENFYNPKEEVKLEAHIK 443
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Yeast
Match: PBP2 (RNA binding protein; has similarity to mammalian heterogeneous nuclear RNP K protein, involved in the regulation of telomere position effect and telomere length; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000000437]) HSP 1 Score: 100.138 bits (248), Expect = 3.767e-23 Identity = 86/364 (23.63%), Postives = 169/364 (46.43%), Query Frame = 2 Query: 368 ESTNPKNSSENC---LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG--NSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEI------SNCPYVLPYSPKHLPYTDVGSAIAINTC--------NTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLS--NDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLK 1396 S N +S +N + +R+L K I+G +G I + + E+ ARINIS+ PERIV + GT + A +I + + + +SI +L+ I+G G R++++++L+ A + L S++R+LT++G D++ I + L N + Y P + + NT + S+K++S + N+ +++ L + Q +S Q + IPN++ + +I + NH + +E F+D + +G +IG+ G IN ++ +G I I + +G ER+++I G++ + Q A +LI++ +++ + + K Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALLEEHGN----EDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHS-QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQP--NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSNAERK 408
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Match: EDO42485 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1C6]) HSP 1 Score: 144.821 bits (364), Expect = 1.130e-38 Identity = 68/170 (40.00%), Postives = 114/170 (67.06%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHL 913 L ++++M GK++GSIIGK G IK+FR+ES A INISDG++PERIV+++GT + A LI +K E++ S ++ P+++R+++ Q +I+G GG +IK+++E++ A+++ EFL SSER +TLSGT +++ CI +C + +E + +PY+P L Sbjct: 27 LVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTPERIVSVTGTKDAVVTAFALIGQKLEDELK---SNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKL 193 HSP 2 Score: 56.6102 bits (135), Expect = 1.146e-8 Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 1196 IGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 +G IIG+ GS I IR +SGA IKI +SE+G +R++ I G+ ++V AQ LIN+ L+ Sbjct: 258 VGSIIGQKGSYITGIRQMSGASIKIGDSENGDDKREVLITGTAEAVGLAQFLINARLR 315 HSP 3 Score: 51.2174 bits (121), Expect = 5.987e-7 Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 2 Query: 323 INYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 I + ELKSN +T P +++R+++ G + GSIIGK G IK+ RE S A + ++ S ER VT+SGT + + L+C Sbjct: 88 IGQKLEDELKSNSKSNTTPP-------VTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLC 173
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Match: EDO37243 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SGC0]) HSP 1 Score: 78.9518 bits (193), Expect = 1.164e-15 Identity = 57/201 (28.36%), Postives = 104/201 (51.74%), Query Frame = 2 Query: 296 DFNAQLMSPIN--YNI-VSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQ--IHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCP 883 D L P + YN V ++ + ++S P ++RIL+ K+ G IIGK G NI++ R E A +N+ D NS ER++TI+ RQ + +++ K E + I++L+Q Q +I+G G +IK+++E + A + + L S+ER++T+SG+++++ C+ + + I+N P Sbjct: 21 DEGGSLKRPADGDYNGNVKRMRESSDVDSNAP-------TTLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTIT-APRQSALDILAEVVPKIGEVQYGH-------------EIQMLVQRSQVGSIIGRAGYKIKEIREGSGANVKVFADCLPNSTERVVTMSGSAETIVKCVE---NVLVAIANAP 197
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Match: EDO35692 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKT2]) HSP 1 Score: 73.1738 bits (178), Expect = 6.171e-14 Identity = 86/347 (24.78%), Postives = 153/347 (44.09%), Query Frame = 2 Query: 410 IRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGN-----SPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESS---ALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGM-EFLTASSERLLTLSGTSDSV-ANCILEICKIFLEISNCPYVLPYSPKH-----LPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIP--------NLSNDSLIKSST-TNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQ 1369 ++IL+ GSIIGK G NI + ++ + ARI +S N + ERI I G I + + K + + + SM S ++I++ I+G G IK + E T A I + + + ER++ + G+ + V A C++ K+ + P+H + Y+ + ++ A +T+ ++ FS + + +L L + +++ +H + NL+N +ST T+ Q + E V +E+IG I+G+GG TI E SGA+I++S + G RK+ I G + Q A L+ +Q Sbjct: 48 LKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIVQMLDFVIDKIRQE-PQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDAESVAGERIVCVGGSQEQVTAACVIITSKVQED-----------PEHALNNNIMYSGLTTSRA---GHTNGQLAGSAFSSGLPFS--ALSGLSALGLTNTATAQNTTTSATNHILAQAALMSGSNLNNPMAPPTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVVITGDVPAAQLAHFLVTQRIQ 377
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: ENSORLT00000018033.2 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:101159528]) HSP 1 Score: 223.016 bits (567), Expect = 4.339e-66 Identity = 126/335 (37.61%), Postives = 194/335 (57.91%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHF-IPNLSND-----SLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLK 1390 L++R+LM GKEVGSIIGK+G+ +KK REES ARINIS+G+SPERIVTI+G + I A +I +KFE D + S +S P+++R++ Q +++G GG +IK+++E T A + + L S+ER +T+SGT ++ C+ IC + LE +PY PK LP ++ +++P S + +P Q ++ T Q + H +P+L L S++T+ +E + N++IGCIIGR GS INEIR VSGA IKI+++ DG R+++I GS S+ AQ LIN+SL++ + T++ Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKILPA-------------GAHAVLAPQHSAHAFA-------IPGQYAFAHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDSSASTS-------TQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLINASLEMARYTMQ 324 HSP 2 Score: 53.1434 bits (126), Expect = 5.531e-7 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 TN +S+ +++R++ G + GS+IGK G IK+ RE + A++ ++ +S ER VTISGT + I ++ IC Sbjct: 91 TNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHIC 166
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: pcbp3 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:101158397]) HSP 1 Score: 211.075 bits (536), Expect = 5.785e-63 Identity = 125/322 (38.82%), Postives = 181/322 (56.21%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1366 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK + S T + P + LA P PL G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL--------------GQTTPAFPGL--DAAPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARL 311 HSP 2 Score: 51.6026 bits (122), Expect = 1.083e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: pcbp3 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:101158397]) HSP 1 Score: 211.075 bits (536), Expect = 7.557e-63 Identity = 124/323 (38.39%), Postives = 181/323 (56.04%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1369 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC + LE +PY PK + S T + P + LA P PL G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL--------------GQTTPAFPGL--DAAPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 312 HSP 2 Score: 51.9878 bits (123), Expect = 9.066e-7 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: PCBP2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:101160803]) HSP 1 Score: 211.46 bits (537), Expect = 1.446e-61 Identity = 122/325 (37.54%), Postives = 187/325 (57.54%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYK 1378 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I +K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC + LE +PY PK GS + F+ + A +P ++ + + + +Q S F SN T + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N DG +R+++I GS S+ A+ LIN+S++ K Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQAYAVQGQHAIPQPDL--TKLHQLAMQQ--SPFPIAPSNQGF----TGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINASVECSK 311 HSP 2 Score: 51.6026 bits (122), Expect = 1.719e-6 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 TN +S+ +++RI++ + GS+IGK G IK+ RE + A++ ++ NS ER +TI+GT + I +K IC Sbjct: 88 TNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: pcbp3 (poly(rC)-binding protein 3-like [Source:NCBI gene;Acc:101167429]) HSP 1 Score: 206.838 bits (525), Expect = 2.013e-61 Identity = 123/320 (38.44%), Postives = 180/320 (56.25%), Query Frame = 2 Query: 404 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1360 L+IR+LM GKEVGSIIGK+G+ +KK RE+S ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SG +++ C+ +IC + LE +PY PK + S T + P S LA P PL G + P L D+ ++ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLSKLHQLAMQQTPFTPL--------------GQTTPAFPGL--DASNQAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 309 HSP 2 Score: 49.6766 bits (117), Expect = 4.685e-6 Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 374 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 592 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISG I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGAPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000005644.1 (SMESG000005644.1) HSP 1 Score: 1047.34 bits (2707), Expect = 0.000e+0 Identity = 526/560 (93.93%), Postives = 527/560 (94.11%), Query Frame = 2 Query: 140 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKE----------------LTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYT---------------VKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTNVKYKPY 1726 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKK+K LTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKI LEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYT VKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTNVKYKPY Sbjct: 1 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKIKRGKFYYAVFFGNILFLLLTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKILLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTNVKYKPY 560
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000005644.1 (SMESG000005644.1) HSP 1 Score: 973.385 bits (2515), Expect = 0.000e+0 Identity = 492/545 (90.28%), Postives = 499/545 (91.56%), Query Frame = 2 Query: 140 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILE-ICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYT---------------VKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTNVKYKPY 1726 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKK+K + + +G + I++ ICKI LEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYT VKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTNVKYKPY Sbjct: 1 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKIKRV--------------NGRNYFIWNGIPNGFFRKIIDTICKILLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTNVKYKPY 531
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000028069.1 (SMESG000028069.1) HSP 1 Score: 236.884 bits (603), Expect = 2.957e-71 Identity = 159/417 (38.13%), Postives = 231/417 (55.40%), Query Frame = 2 Query: 248 PIALTGLPSLPFINTCDFNAQLMSPINYN-IVSELKSNPIIESTNP--------KNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLD---KSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKH------------------LPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNL------------SNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQL 1372 P + + LP DFN S NY V ++S+P +S NP +N ++IR++MSGKEVGSIIGK+GDNIKK REES ARINISDG+ PERIVT++GT +I+ A ++C+KFE+D+ ++ K+ + + P+++R+L+ A Q +I+G GG +IK ++E+ A+I E L SSER +T+SGT+++VA CI EI I E +PY PK P+ + + SPT + + + ILP QN++ + V P F P L S S SS+ ++KEF + N+MIGCIIGRGGSTINEIR +SGAQIKIS +E+ +R+I+I G+ +S+ TA++LIN+ L + Sbjct: 38 PEGYSHIQQLPQFAVNDFNVPFFSFQNYQPFVMSMESDPS-QSINPPSPGKCLTQNHIAQMVTIRMIMSGKEVGSIIGKKGDNIKKIREESAARINISDGSCPERIVTVTGTVDKIYSAFLMMCQKFEDDYIGCINSNKKNADVTCPPVTLRLLVPATQCGSIIGKGGCKIKDIREMCGASIQVASELLPNSSERSVTVSGTANAVARCIQEISTILQETPLRCNTIPYKPKSSYSGIHTPLPSPNNMPPLFPFVGGNHEMMKHMDRYQQNNSSPTIALYPVSQSATGQILP-QNMFPA---YVPEHNPYHVFPPALPIWPRQHPPLSYSVKSDSLSSSQTSSVGSQLVKEFSITNDMIGCIIGRGGSTINEIRTLSGAQIKISYTEEKSTDRQITISGTPESINTAEMLINAKLNI 449
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000028069.1 (SMESG000028069.1) HSP 1 Score: 237.269 bits (604), Expect = 1.289e-70 Identity = 160/443 (36.12%), Postives = 240/443 (54.18%), Query Frame = 2 Query: 248 PIALTGLPSLPFINTCDFNAQLMSPINYN-IVSELKSNPIIESTNP--------KNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLD---KSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTF---SDNMSL--------ATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQ----------------------NIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL-KSVMKSNNPLVLSNP 1438 P + + LP DFN S NY V ++S+P +S NP +N ++IR++MSGKEVGSIIGK+GDNIKK REES ARINISDG+ PERIVT++GT +I+ A ++C+KFE+D+ ++ K+ + + P+++R+L+ A Q +I+G GG +IK ++E+ A+I E L SSER +T+SGT+++VA CI EI I E P +PY S I+T S + P F N + NS P + L + S+ + Q ++P + + + Q ++KEF + N+MIGCIIGRGGSTINEIR +SGAQIKIS +E+ +R+I+I G+ +S+ TA++LIN++++ + ++ K+ S NP V P Sbjct: 38 PEGYSHIQQLPQFAVNDFNVPFFSFQNYQPFVMSMESDPS-QSINPPSPGKCLTQNHIAQMVTIRMIMSGKEVGSIIGKKGDNIKKIREESAARINISDGSCPERIVTVTGTVDKIYSAFLMMCQKFEDDYIGCINSNKKNADVTCPPVTLRLLVPATQCGSIIGKGGCKIKDIREMCGASIQVASELLPNSSERSVTVSGTANAVARCIQEISTILQET-------PLRCNTIPYKPKSSYSGIHTPLPSPNNMPPLFPFVGGNHEMMKHMDRYQQNNSSPTIALYPVSQSATGQILPQNMFPAYVPEHNPYHVFPPALPIWPRQHPPLSYSVKSDSLSSSQTSSVGSQLVKEFSITNDMIGCIIGRGGSTINEIRTLSGAQIKISYTEEKSTDRQITISGTPESINTAEMLINANIKSFMSSVTSNKTKPPSQNPSVDYQP 472
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000029221.1 (SMESG000029221.1) HSP 1 Score: 115.931 bits (289), Expect = 3.475e-28 Identity = 92/330 (27.88%), Postives = 156/330 (47.27%), Query Frame = 2 Query: 401 CLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSME--SSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLT-ASSERLLTLSGTSDSVANCILEICKIFLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQ 1381 C+ +R L+ K GS+IGK G+NI+ R MARINISD + PERI+++ I + +K E P S + +A + +R+L+ ++G GG RI L+E D +L + + S++R++ + G V +CI +I + E + Y ++ + A A + + I P SL + + Q+ Y + +Y + N TT++ Q++ I+E + ++++G IIG GGS I ++R SGA I IS+ + QER ++I G+ V+ A +IN L Y + Sbjct: 20 CIELRFLIPSKAAGSVIGKSGENIRNLRRLFMARINISDNSGPERILSLEADLDTILGILAQCLEKMEGCIPLPRAGSGDCNDNASNVDLRMLVNQSLVGALIGRGGGRINDLREKCDLRVLKVYQTVCPESTDRIVQMVGAIPLVIDCIGKIVDMCKETPVREPKVNYDAQNYDH-----ATANHYGGWAQSPIRPDNIATRSLGFSRPGFMKHQSTYKNEHYDYSYPNNYREMDTSFRN-------TTHYEDQESEIQEIRLPHKVVGAIIGPGGSRIQQVRMDSGAHITISSLDRNPQERVVTISGNTQDVKRAYNMINECLGKYGR 337 The following BLAST results are available for this feature:
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035570 ID=SMED30035570|Name=Poly(RC)-binding protein 3|organism=Schmidtea mediterranea sexual|type=transcript|length=1792bpback to top protein sequence of SMED30035570-orf-1 >SMED30035570-orf-1 ID=SMED30035570-orf-1|Name=SMED30035570-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=530bp MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINback to top Annotated Terms
The following terms have been associated with this transcript:
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