SMED30035464

Overview
NameSMED30035464
Smed IDSMED30035464
Length (bp)616
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30035464 (SMED30035464) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30035464 (SMED30035464) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30035464 (SMED30035464) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30035464 (SMED30035464) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30035464

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
intestinal phagocyteSMED30035464SMESG000026617.1 Contig3508newmark_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30035464SMESG000026617.1 Contig3508uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
nervous systemSMED30035464 dd_Smed_v4_3692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30035464 dd_Smed_v4_3692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30035464 dd_Smed_v4_3692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30035464 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000560:62435..63051 +2976
Homology
[Close]
BLAST of SMED30035464 vs. Ensembl Human
Match: LYRM2 (LYR motif containing 2 [Source:HGNC Symbol;Acc:HGNC:25229])

HSP 1 Score: 46.595 bits (109), Expect = 1.044e-6
Identity = 21/71 (29.58%), Postives = 40/71 (56.34%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+RR QV+ +YR+ ++  + + +   +  + +W R EF+ NK  T +  I   I +G   L + E+ +AL+
Sbjct:   16 FVRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMITQGNMQLKELEKTLALA 86
[Close]
BLAST of SMED30035464 vs. Ensembl Fly
Match: CG34229 (gene:FBgn0259832 transcript:FBtr0112422)

HSP 1 Score: 43.5134 bits (101), Expect = 6.617e-6
Identity = 17/71 (23.94%), Postives = 42/71 (59.15%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+ R +V+ +YR+  +  + + D + ++E+ +W R++F+ N+  ++++ I   +  G + LT+    + LS
Sbjct:   14 FMLRQEVLKLYREIFRTIRQVPDKNSQLELKSWARHDFQTNRHQSDEVAIKMLLQHGRRSLTELRTSLQLS 84
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BLAST of SMED30035464 vs. Ensembl Xenopus
Match: zswim8 (zinc finger SWIM-type containing 8 [Source:Xenbase;Acc:XB-GENE-1217722])

HSP 1 Score: 47.7506 bits (112), Expect = 3.346e-7
Identity = 22/71 (30.99%), Postives = 38/71 (53.52%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+ R QV+ +YRK ++  + I D   +  +  W R EF+ NK  T ++ I   I  G + L + E+ + L+
Sbjct:   15 FLVRQQVLGLYRKILRSVRQIPDAADQRYMQEWAREEFRRNKGATEEIAIRMMITHGQRQLQELERALHLA 85
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BLAST of SMED30035464 vs. Ensembl Mouse
Match: Lyrm2 (LYR motif containing 2 [Source:MGI Symbol;Acc:MGI:1917573])

HSP 1 Score: 48.1358 bits (113), Expect = 2.179e-7
Identity = 23/72 (31.94%), Postives = 40/72 (55.56%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALSS 453
            F+RR QV+ +YRK ++  + +     +  + +W R EFK NK  T +  I   I +G   L + E+ +AL++
Sbjct:   16 FMRRQQVLLLYRKILRAIRQVPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQLKELERTLALAN 87
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BLAST of SMED30035464 vs. UniProt/SwissProt
Match: sp|B2GV91|LYRM2_RAT (LYR motif-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Lyrm2 PE=3 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 5.780e-7
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+RR QV+ +YRK ++  K I     +  + +W R EFK NK  T +  I   I +G   L + E+ +AL+
Sbjct:   16 FMRRQQVLLLYRKILRAIKQIPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQLKELERTLALA 86
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BLAST of SMED30035464 vs. UniProt/SwissProt
Match: sp|Q8R033|LYRM2_MOUSE (LYR motif-containing protein 2 OS=Mus musculus OX=10090 GN=Lyrm2 PE=3 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 1.524e-6
Identity = 23/72 (31.94%), Postives = 40/72 (55.56%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALSS 453
            F+RR QV+ +YRK ++  + +     +  + +W R EFK NK  T +  I   I +G   L + E+ +AL++
Sbjct:   16 FMRRQQVLLLYRKILRAIRQVPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQLKELERTLALAN 87
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BLAST of SMED30035464 vs. UniProt/SwissProt
Match: sp|B3DLF3|LYRM2_XENTR (LYR motif-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lyrm2 PE=3 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.773e-6
Identity = 22/71 (30.99%), Postives = 38/71 (53.52%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+ R QV+ +YRK ++  + I D   +  +  W R EF+ NK  T ++ I   I  G + L + E+ + L+
Sbjct:   15 FLVRQQVLGLYRKILRSVRQIPDAADQRYMQEWAREEFRRNKGATEEIAIRMMITHGQRQLQELERALHLA 85
[Close]
BLAST of SMED30035464 vs. UniProt/SwissProt
Match: sp|Q5RES3|LYRM2_PONAB (LYR motif-containing protein 2 OS=Pongo abelii OX=9601 GN=LYRM2 PE=3 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 2.315e-6
Identity = 22/71 (30.99%), Postives = 40/71 (56.34%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+RR QV+ +YR+ ++  + + +   +  + +W R EFK NK  T +  I   I +G   L + E+ +AL+
Sbjct:   16 FVRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQLKELEKTLALA 86
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BLAST of SMED30035464 vs. UniProt/SwissProt
Match: sp|Q32LM5|LYRM2_BOVIN (LYR motif-containing protein 2 OS=Bos taurus OX=9913 GN=LYRM2 PE=3 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 4.394e-6
Identity = 22/71 (30.99%), Postives = 40/71 (56.34%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+RR QV+ +YR+ ++  + + +   +  + +W R EFK NK  T +  I   I +G   L + E+ +AL+
Sbjct:   16 FMRRQQVLLLYRRILQAIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQLKELEKTLALA 86
[Close]
BLAST of SMED30035464 vs. TrEMBL
Match: A0A1S3HHE6 (LYR motif-containing protein 2 OS=Lingula unguis OX=7574 GN=LOC106154917 PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.793e-6
Identity = 23/71 (32.39%), Postives = 41/71 (57.75%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+ R +V+ +YR+F +  + + D  ++ E+  W+R  FK N  L ++L I   I +  K L + E+M+ LS
Sbjct:   16 FLLRAEVLKLYRQFGRTLQCVPDKSHRAELQTWVRTGFKQNIGLEDELAIKMCISQAQKQLKELERMLKLS 86
[Close]
BLAST of SMED30035464 vs. TrEMBL
Match: A0A1Y1W7K8 (Uncharacterized protein OS=Linderina pennispora OX=61395 GN=DL89DRAFT_268218 PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.331e-6
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFE 432
            FI+RG+VI+MYRK+M+LTK I D + K E+  WIR +F   +  T+   I   + + T+   + E
Sbjct:   23 FIQRGKVIAMYRKYMRLTKRIPDKNDKREMRQWIRGDFDRYRSETDAQKIEVLLAQATRQYKEME 87
[Close]
BLAST of SMED30035464 vs. TrEMBL
Match: A0A1S4EDP3 (LYR motif-containing protein 2 OS=Diaphorina citri OX=121845 GN=LOC108252589 PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.485e-6
Identity = 24/70 (34.29%), Postives = 42/70 (60.00%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIAL 447
            F+ R +V+ +Y+ F++  K I D   + E+ +WIR+EFK NK L+++  I   I  G + L + E  ++L
Sbjct:   15 FLLRAEVLGLYKTFLRTAKEIPDESSRKEMIDWIRSEFKHNKHLSDETSIKMMIQYGQRSLKEVESSVSL 84
[Close]
BLAST of SMED30035464 vs. TrEMBL
Match: A0A2C9KGH6 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106057604 PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 4.546e-6
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            FI R +V+ +YR F++L+  + D   + E+  WIR++F  NK  T +  I  AI RG   L + EQ I ++
Sbjct:    3 FILRSEVLKLYRSFLRLSYKVEDKARRKELQYWIRSDFDSNKNHTEEEVIKMAISRGKLSLRELEQTIMIA 73
[Close]
BLAST of SMED30035464 vs. TrEMBL
Match: A0A2J7RRH4 (LYR motif-containing protein 2 OS=Cryptotermes secundus OX=105785 GN=lyrm2 PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.723e-6
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+ R QV+ +YR F++  + + D   + E+  W R++FK NK  T++  I   I  G + L Q +Q +A S
Sbjct:   15 FMLRQQVLKLYRSFLRAIRDVPDEESRKELLEWARSDFKNNKHHTDEYAIKMLISHGERQLKQLQQNVAFS 85
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BLAST of SMED30035464 vs. Ensembl Nematostella
Match: EDO41072 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5E6])

HSP 1 Score: 51.2174 bits (121), Expect = 3.763e-9
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 1 
Query:  238 FIRRGQVISMYRKFMKLTKTISDPHYKIEISNWIRNEFKGNKKLTNDLDINSAILRGTKMLTQFEQMIALS 450
            F+ R QV+ +YR  MK    I D +++ E+  W R EFK NK  T+   I   I RG + L +    I+L+
Sbjct:   15 FMVRRQVLGLYRDLMKALNKIPDKNHQKELKEWTREEFKQNKTETDPAAIQFMITRGQQALREIASTISLA 85
The following BLAST results are available for this feature:
BLAST of SMED30035464 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1
Match NameE-valueIdentityDescription
LYRM21.044e-629.58LYR motif containing 2 [Source:HGNC Symbol;Acc:HGN... [more]
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BLAST of SMED30035464 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30035464 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CG342296.617e-623.94gene:FBgn0259832 transcript:FBtr0112422[more]
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BLAST of SMED30035464 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30035464 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zswim83.346e-730.99zinc finger SWIM-type containing 8 [Source:Xenbase... [more]
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BLAST of SMED30035464 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Lyrm22.179e-731.94LYR motif containing 2 [Source:MGI Symbol;Acc:MGI:... [more]
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BLAST of SMED30035464 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|B2GV91|LYRM2_RAT5.780e-735.21LYR motif-containing protein 2 OS=Rattus norvegicu... [more]
sp|Q8R033|LYRM2_MOUSE1.524e-631.94LYR motif-containing protein 2 OS=Mus musculus OX=... [more]
sp|B3DLF3|LYRM2_XENTR1.773e-630.99LYR motif-containing protein 2 OS=Xenopus tropical... [more]
sp|Q5RES3|LYRM2_PONAB2.315e-630.99LYR motif-containing protein 2 OS=Pongo abelii OX=... [more]
sp|Q32LM5|LYRM2_BOVIN4.394e-630.99LYR motif-containing protein 2 OS=Bos taurus OX=99... [more]
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BLAST of SMED30035464 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S3HHE62.793e-632.39LYR motif-containing protein 2 OS=Lingula unguis O... [more]
A0A1Y1W7K83.331e-640.00Uncharacterized protein OS=Linderina pennispora OX... [more]
A0A1S4EDP34.485e-634.29LYR motif-containing protein 2 OS=Diaphorina citri... [more]
A0A2C9KGH64.546e-636.62Uncharacterized protein OS=Biomphalaria glabrata O... [more]
A0A2J7RRH44.723e-633.80LYR motif-containing protein 2 OS=Cryptotermes sec... [more]
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BLAST of SMED30035464 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30035464 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30035464 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30035464 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO410723.763e-936.62Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30035464 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30035464 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30035464 ID=SMED30035464|Name=SMED30035464|organism=Schmidtea mediterranea sexual|type=transcript|length=616bp
AATTTAAAACAGGTTAATTTAAAATTATTTATTAAATAAATATTATAATT
TATTCCTTGAAAAATCCATTATAATAACAGATATTAGCAAATTTACACCT
TATATTTACTAATAGTATGTAATTAGAAATGTTATCCTTTGATATTTATA
TCATTTATTTGCTCTATTAAATTCAAAAAAAATATTGTTTTTATTTGAAA
AACTTCTTTTGAATTGTTTCATTATATGGAAATTTAGTTTATAAGACGAG
GTCAAGTGATATCGATGTATCGGAAGTTTATGAAACTCACAAAAACAATT
TCAGATCCTCATTATAAAATTGAAATATCTAATTGGATCAGAAATGAATT
TAAAGGAAACAAAAAGCTTACTAACGATTTAGACATCAATTCAGCCATTT
TACGCGGAACAAAAATGTTGACTCAATTCGAGCAAATGATCGCTTTGTCT
AGTTAAATAAATCATTTCGTTGACTTCAGTTTTTTATGAATTTAGTACAA
TTTGTCGATATTTTATGATTTTAGAGAAGCTCAACTCTAAAGATTTATGT
TCGATTAATTGTGTGTATATTACAAATCTAATAGTTGTTTTAATTGATTA
AACCTTTCTGTCTTTA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000070intestinal phagocyte
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR
Vocabulary: cellular component
TermDefinition
GO:0005739mitochondrion
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 2..52
e-value: 2.8E-7
score: 30.5