Kinesin motor domain protein

Overview
NameKinesin motor domain protein
Smed IDSMED30035448
Length (bp)3574
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Kinesin motor domain protein (SMED30035448) t-SNE clustered cells

Violin plots show distribution of expression levels for Kinesin motor domain protein (SMED30035448) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Kinesin motor domain protein (SMED30035448) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Kinesin motor domain protein (SMED30035448) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30035448

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30035448SMESG000075721.1 SmedASXL_016652SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
pharynxSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
muscle cellSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30035448SMESG000075721.1 dd_Smed_v4_11799_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30035448SMESG000075721.1 Contig55259newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30035448SMESG000075721.1 Contig55259uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
head regionSMED30035448SMESG000075721.1 dd_Smed_v6_11799_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Kinesin motor domain protein vs. TrEMBL
Match: A0A267GJP5 (Kinesin motor domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig010098g2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.355e-11
Identity = 111/490 (22.65%), Postives = 199/490 (40.61%), Query Frame = 3 
Query:  204 SNFAVNAKTKSITLTPQTP--NQSHFSSKVLKTFLLDSISIHEMVFVDLLVSA----IKRVVNYENSLIISVNRGT-RKSSKLWNKEF-------LETLTTWLYHYLKLCEDKEHS--KFSIRISAXXXXXXX-------XXXXXXTKAANEE----------SNLENYISLDSLTCRRCND-LSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQ-QTSLKSESCSVFSKCSKIFLLNLDLTKCR--SQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKK----------SWDFTDRESEE-SPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAF--ISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRM-AKTTILNG----QELWVDGPIVFQ 1508
            SN AV+++ K +T+   TP  ++S  S  V K F+ DS+   E    +L  SA    I+ VVN  +  +     G   K+  +   +        +     WL+H ++  + ++HS  ++S+R+SA+E+   +             + AA+ E          + LEN   L + T  +    L +A+   ++++    ++  G  H+L+T  +YQ +         V    S++ L++L   +    S +  +SL  L   + +L+N + +  N E+K  ++  E           I Q+S+  +  +++ Q+LQ + +IQRL+ +  K             F  R +    P      M     +     S+ + +S+SE SC +TVI A   +  N       +  +      +SS  DS                        +  PRTNA A P    R+  K T +       E W+DGP   Q
Sbjct:  417 SNLAVDSRRKQVTVFDTTPQYHRSQGSHNVPKAFIYDSVFTEENSLPELCASALPDIIQGVVNGTDGCVFVFGYGNLGKTHTMMGSDVSPGSLGVIPCAIAWLFHLIQEQQRQQHSTARYSVRVSAVEVQGRDEDLRDLLAGEAGSSGAASAEVYLREDPISGAQLENQSELRAPTAEKAAHYLDAALYARSQMQ----QQQNGMSHLLFTLHLYQYRVERSGHGRGVAGGRSRLHLIDLGSGRTSRDSGYPALSLAALGNVLISLVNGQRQIPNRESKLGQLLREALGSLTCRACMICQVSSSLQHSTESLQILQFANKIQRLRRRGGKLTSNSSDSSSCDSFGVRRAGRMRPPQMGLVMASARLNAVTSQSEVDYSSSSEQSC-DTVIFAGGYMTDNEHPPGAAAAAVARRLAQVSSSEDSDTGTETGG----------SGGGSGRRVPRTNARARPSLGGRLVGKITAVEALSMQPEQWIDGPKAMQ 891
[Close]
BLAST of Kinesin motor domain protein vs. TrEMBL
Match: A0A1I8I4F2 (Kinesin motor domain-containing protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.728e-9
Identity = 111/496 (22.38%), Postives = 199/496 (40.12%), Query Frame = 3 
Query:  204 SNFAVNAKTKSITLTPQTP--NQSHFSSKVLKTFLLDSISIHEMVFVDLLVSA----IKRVVNYENSLIISVNRGT-RKSSKLWNKEF-------LETLTTWLYHYLKLCEDKEHS--KFSIRISAXXXXXXXXXXXXXTKAANEE-----------------------SNLENYISLDSLTCRRCND-LSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQ-QTSLKSESCSVFSKCSKIFLLNLDLTKCR--SQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKK----------SWDFTDRESEE-SPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAF--ISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRM-AKTTILNG----QELWVDGPIVFQ 1508
            SN AV+++ K +T+   TP  ++S  S  V K F+ DS+   E    +L  SA    I+ VVN  +  +     G   K+  +   +        +     WL+H ++  + ++HS  ++S+R+SA+E+   +++L DL                              + LEN   L + T  +    L +A+   ++++    ++  G  H+L+T  +YQ +         V    S++ L++L   +    S +  +SL  L   + +L+N + +  N E+K  ++  E           I Q+S+  +  +++ Q+LQ + +IQRL+ +  K             F  R +    P      M     +     S+ + +S+SE SC +TVI A   +  N       +  +      +SS  DS                        +  PRTNA A P    R+  K T +       E W+DGP   Q
Sbjct:   23 SNLAVDSRRKQVTVFDTTPQYHRSQGSHNVPKAFIYDSVFTEENSLPELCASALPDIIQGVVNGTDGCVFVFGYGNLGKTHTMMGSDVSPGSLGVIPCAIAWLFHLIQEQQRQQHSTARYSVRVSAVEVQGRDEDLRDLLAGEAGGGGGGGSSGAASAEVYLREDPISGAQLENQSELRAPTAEKAAHYLDAALYARSQMQ----QQQNGMSHLLFTLHLYQYRVERSGHGRGVAGGRSRLHLIDLGSGRTSRDSGYPALSLAALGNVLISLVNGQRQIPNRESKLGQLLREALGSLTCRACMICQVSSSLQHSTESLQILQFANKIQRLRRRGGKLTSNSSDSSSCDSFGVRRAGRMRPPQMGLVMASARLNAVTSQSEVDYSSSSEQSC-DTVIFAGGYMTDNEHPPGAAAAAVARRLAQVSSSEDSDTGTETGG----------SGGGSGRRVPRTNARARPSLGGRLVGKITAVEALSMQPEQWIDGPKAMQ 503
[Close]
BLAST of Kinesin motor domain protein vs. TrEMBL
Match: A0A267GW49 (Kinesin motor domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig003923g1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.284e-9
Identity = 111/496 (22.38%), Postives = 199/496 (40.12%), Query Frame = 3 
Query:  204 SNFAVNAKTKSITLTPQTP--NQSHFSSKVLKTFLLDSISIHEMVFVDLLVSA----IKRVVNYENSLIISVNRGT-RKSSKLWNKEF-------LETLTTWLYHYLKLCEDKEHS--KFSIRISAXXXXXXXXXXXXXTKAANEE-----------------------SNLENYISLDSLTCRRCND-LSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQ-QTSLKSESCSVFSKCSKIFLLNLDLTKCR--SQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKK----------SWDFTDRESEE-SPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAF--ISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRM-AKTTILNG----QELWVDGPIVFQ 1508
            SN AV+++ K +T+   TP  ++S  S  V K F+ DS+   E    +L  SA    I+ VVN  +  +     G   K+  +   +        +     WL+H ++  + ++HS  ++S+R+SA+E+   +++L DL                              + LEN   L + T  +    L +A+   ++++    ++  G  H+L+T  +YQ +         V    S++ L++L   +    S +  +SL  L   + +L+N + +  N E+K  ++  E           I Q+S+  +  +++ Q+LQ + +IQRL+ +  K             F  R +    P      M     +     S+ + +S+SE SC +TVI A   +  N       +  +      +SS  DS                        +  PRTNA A P    R+  K T +       E W+DGP   Q
Sbjct:  322 SNLAVDSRRKQVTVFDTTPQYHRSQGSHNVPKAFIYDSVFTEENSLPELCASALPDIIQGVVNGTDGCVFVFGYGNLGKTHTMMGSDVSPGSLGVIPCAIAWLFHLIQEQQRQQHSTARYSVRVSAVEVQGRDEDLRDLLAGEAGGGGGGGSSGAASAEVYLREDPISGAQLENQSELRAPTAEKAAHYLDAALYARSQMQ----QQQNGMSHLLFTLHLYQYRVERSGHGRGVAGGRSRLHLIDLGSGRTSRDSGYPALSLAALGNVLISLVNGQRQIPNRESKLGQLLREALGSLTCRACMICQVSSSLQHSTESLQILQFANKIQRLRRRGGKLTSNSSDSSSCDSFGVRRAGRMRPPQMGLVMASARLNAVTSQSEVDYSSSSEQSC-DTVIFAGGYMTDNEHPPGAAAAAVARRLAQVSSSEDSDTGTETGG----------SGGGSGRRVPRTNARARPSLGGRLVGKITAVEALSMQPEQWIDGPKAMQ 802
[Close]
BLAST of Kinesin motor domain protein vs. TrEMBL
Match: A0A5S6Q086 (Uncharacterized protein OS=Trichuris muris OX=70415 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 6.664e-7
Identity = 86/368 (23.37%), Postives = 165/368 (44.84%), Query Frame = 3 
Query:  198 DMSNFAVNAKTKSITLTPQ--TPNQSHFSSK--VLKTFLLDSI-----SIHEMVFVDLLVSAIKRVVNYENSLIISVNRGTRKSSKLWNKE--------FLETLTTWLYHYLKLCEDKEHSKFSIRISAXXXXXXXXXXXXXTKA-ANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNI---KEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRSQHNPMSL--PFLSKFITTLINKENKRINCENKFQKVFSE-IFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFTDRESEESPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVI 1229
            D    AV+++ + +T+  Q  +  +   + K   LKTF  D+      S+ E+    LL    + V+N E++ ++S       +   +  E         +    +W+Y  +   + +  S+FS+R+SALE+   ++ L DL      EE  L+N   +      R + +  A  + +   +  I   +E++   H +YT  IYQ    +  +  V    S++ L++L   +  ++    SL  P +   + TL+  +    + E+K  ++  E I      F + ++ ISA  +++ ++  +LQ+S R+ RLK   K     + ++S     + + R R+  F R         TS+SE SC +TVI
Sbjct:  209 DSRYIAVDSRQRQVTIAEQYISGRRPSIAGKGPTLKTFTYDAAFGCDDSLTEICSSSLL-EVTQSVLNGEDACVLSFGHTGPGAQNTFVGEDKSVQSLGVIPCAISWVYRLINEQKKRTGSRFSVRVSALELSGSDERLRDLLAIDGGEEVELQNMNEV------RVSSVEKAAHYLDMALSSRIFASEEERRNSHFVYTLHIYQYHVNQDGTGGVAGGRSRLHLIDLGSGEKSTKQGRTSLTQPAIGNVLLTLLQGQKHVPSRESKLTRLLKETIGTSQCKFVTVLSSISADPERYLESMNVLQISSRLYRLKRTKKSPLAISGQQSSGGESSCDDRSRR--FVRRSASDPDCTTSSSEQSC-DTVI 566
[Close]
BLAST of Kinesin motor domain protein vs. TrEMBL
Match: A0A0V1IU97 (Kinesin-like protein KIF26A OS=Trichinella pseudospiralis OX=6337 GN=Kif26a PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 6.845e-7
Identity = 97/440 (22.05%), Postives = 181/440 (41.14%), Query Frame = 3 
Query:  258 PNQSHFSSKVLKTFLLDSI-----SIHEMVFVDLLVSAIKRVVNYENSLIISVNRGTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISAXXXXXX--------XXXXXXXTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFN---EIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLT-KC-RSQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSE-IFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFTDRESEESPKNNNSRMRKCNFHRSGKFSDSE-ITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAH-------AWPKSAIRMAKTTILNGQELWVDGP 1496
            P  ++ +  + K F  DS+     S+ E +  ++L   I+ V+  E+S I+S    T +   +     + +   WLY  +   + +  ++FS+R+SA+EI            ++   +  +A+  ++L+N   L      R   L  A  + +    ++  N  E++   H++YT  +YQ    +     V    S++ L++L    KC +   + ++LP +   + TLI  +    + ++   K+  E I      F S +  +S    ++ +T   +Q+  R+ RLK   K  +      S     +   R R+    RS   SD +  TS+SE SC   +      +                 F++    S   D+  S+SS +R   P ++    + P+  AH       A P SA+          QE W+DGP
Sbjct:  306 PVGANKAGALKKVFGFDSVFSGDDSLSE-ICSNVLFDVIQTVIAGEDSCILSFGY-TGEDHDVHQVGVIPSAIAWLYRLIGEQKQRTGARFSVRVSAVEISGPNEEVRDLLANKGAVVLDSASTTAHLQNASEL------RAPSLEKAGHYLDTALSLRKFNTDEERRNSHLIYTLHVYQYRVNQDGKGGVSGGRSRLHLIDLGPGEKCTKPNRSSLTLPAIGNVLLTLIQGQKHLPSKDSNLTKILKETIGSSQCKFVSILACVSPDSGRYMETMNTVQIISRLYRLKRTKKTPFGVGLNSSSGGDSSCEERQRRM-IRRS--ISDPDCTTSSSEQSCDTVIFLGTPGV----------------PFVA--EPSAASDVH-SRSSSTRIPKP-SSNSTSTAPQRPAHFLNNLICAGPASAMTKVSGKHSIEQEEWIDGP 714
[Close]
BLAST of Kinesin motor domain protein vs. Planmine SMEST
Match: SMESG000075721.1 (SMESG000075721.1)

HSP 1 Score: 1873.98 bits (4853), Expect = 0.000e+0
Identity = 992/992 (100.00%), Postives = 992/992 (100.00%), Query Frame = 3 
Query:   69 MENFQISNNVIPIALESVTDEFCNFKSFRDKIFNAVKIHHYREDMSNFAVNAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHEMVFVDLLVSAIKRVVNYENSLIISVNRGTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISAXXXXXXXXXXXXXTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRSQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFTDRESEESPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQLPNQSTSTISTPETVKQVLGTSNKFSKTLKSQETQYEYQKLNTNDSKPDFHPLSDITEITDELELIKQTNEFIGLSDVSYNSLNSRISQNKLNLQSEQMNQSILSPKNDVRKVSRWINDVNQLTASQVPLSKSFHEQFMPKQYLQPILXXXXXXXXXXXXXXXXXXXXXXXXXRLYSPVQSILPVTKNDSKQISYVNEDEQKNVLISDKKLFNRYKKKESNTNDSKDNSKLRSFMSKSPLGILKKTLFQSKSSKKKTEIPEYLTEPNTSISASQEIRYLMPAMHLEXXXXXXXXXECNEWFRNIKTFKNKLDTSTNKYSSLRPPSAPLLAGSGSIMNXXXXXXXXXXXXXXXXVITKDSEISSHIDSNSDQSIHSFSKPTIKQSTSFSQTRTVGSGQNELDSDVIAQRCENLVKQEKALLLMQHQELMIQDFYSTTRPMLTNDDSKYTLRMSTVNYDRLSYDNQYLEELEEDTNIIRDSIAFYKSLVHLESSFLSSPERHRKLLN 3044
            MENFQISNNVIPIALESVTDEFCNFKSFRDKIFNAVKIHHYREDMSNFAVNAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHEMVFVDLLVSAIKRVVNYENSLIISVNRGTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISALEIDEENDELIDLTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRSQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFTDRESEESPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQLPNQSTSTISTPETVKQVLGTSNKFSKTLKSQETQYEYQKLNTNDSKPDFHPLSDITEITDELELIKQTNEFIGLSDVSYNSLNSRISQNKLNLQSEQMNQSILSPKNDVRKVSRWINDVNQLTASQVPLSKSFHEQFMPKQYLQPILNSSSSNSHSYQYYDPDSQDDYSSYPRLYSPVQSILPVTKNDSKQISYVNEDEQKNVLISDKKLFNRYKKKESNTNDSKDNSKLRSFMSKSPLGILKKTLFQSKSSKKKTEIPEYLTEPNTSISASQEIRYLMPAMHLEDSSDSSSDSECNEWFRNIKTFKNKLDTSTNKYSSLRPPSAPLLAGSGSIMNSQHSTRQRSSSSGYGSVITKDSEISSHIDSNSDQSIHSFSKPTIKQSTSFSQTRTVGSGQNELDSDVIAQRCENLVKQEKALLLMQHQELMIQDFYSTTRPMLTNDDSKYTLRMSTVNYDRLSYDNQYLEELEEDTNIIRDSIAFYKSLVHLESSFLSSPERHRKLLN
Sbjct:    1 MENFQISNNVIPIALESVTDEFCNFKSFRDKIFNAVKIHHYREDMSNFAVNAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHEMVFVDLLVSAIKRVVNYENSLIISVNRGTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISALEIDEENDELIDLTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRSQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFTDRESEESPKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQLPNQSTSTISTPETVKQVLGTSNKFSKTLKSQETQYEYQKLNTNDSKPDFHPLSDITEITDELELIKQTNEFIGLSDVSYNSLNSRISQNKLNLQSEQMNQSILSPKNDVRKVSRWINDVNQLTASQVPLSKSFHEQFMPKQYLQPILNSSSSNSHSYQYYDPDSQDDYSSYPRLYSPVQSILPVTKNDSKQISYVNEDEQKNVLISDKKLFNRYKKKESNTNDSKDNSKLRSFMSKSPLGILKKTLFQSKSSKKKTEIPEYLTEPNTSISASQEIRYLMPAMHLEDSSDSSSDSECNEWFRNIKTFKNKLDTSTNKYSSLRPPSAPLLAGSGSIMNSQHSTRQRSSSSGYGSVITKDSEISSHIDSNSDQSIHSFSKPTIKQSTSFSQTRTVGSGQNELDSDVIAQRCENLVKQEKALLLMQHQELMIQDFYSTTRPMLTNDDSKYTLRMSTVNYDRLSYDNQYLEELEEDTNIIRDSIAFYKSLVHLESSFLSSPERHRKLLN 992
[Close]
BLAST of Kinesin motor domain protein vs. Planmine SMEST
Match: SMESG000028296.1 (SMESG000028296.1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.960e-19
Identity = 120/510 (23.53%), Postives = 229/510 (44.90%), Query Frame = 3 
Query:  156 DKIFNAVKIHHYREDMSNFAVNAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHE-----MVFVDLLVSAIKRVVNYENSLIISVNR----------GTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISAXXXXXXXX-------XXXXXTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRS--QHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFY-----SFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKK--------------SWDFTDRESEESPKNNNSRMRKCNFHRSGKFS-DSEITSNSEFSCAETVICAKDE-------IRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQL 1532
            D+I   V++    E  S  +++     I+LT  TP++   +S   K F +DSI IHE      +  + L   I+ V N E++ +IS             G+ KS  +     +     WL++Y++    +E+++FS+RISA EI    +        + + +  +++  N  + +    +  R  N   +A      +   +  E+ G  H+  T  +YQ   L+++S  +    SK+ +++L   +     +   +S+  +SK I  L + +    N ++   +    +   NVN Y     S I ++S K+ ++++  Q++QL+ ++ R K +L K                    R ++   +  N   R    +R+   S D + TS+SE SC +TVI            +R N+D  S    + ++ F  S+S+    + +++          +  +K+++  + N++AWPK A++ AK  + +GQELWVDGP  F+      QL
Sbjct:   84 DRIQVFVQLLSCPETSSCLSLDIPNNCISLTNPTPSRKFTASNAPKLFPVDSI-IHEDCPIMEICSNSLGPVIRSVANGEDACVISFGNVLPSDLNPIIGSDKSPNMIG--VMPCAIVWLFNYIQTIRKQEYARFSVRISAAEISGRQENCRDLLLSISNPSSDSSQPLNSSSSLFNSLVELRAVNVEKAAYYLDYALTERSKSEENGLSHMFLTLHLYQY-HLQNDS-GISGGRSKLHIIDLGCGRLSEDVESTALSIQGISKVIYALWSHQRHIPNPDSILAQTLKRL---NVNSYTMMQTSMIIKVSGKETQYNEALQVVQLASKLCRQKTRLSKLSSSTCSDDNSSSSDSFSIRRMTKFRSQFGNDLKRLDRLNRTLSISSDVDATSSSEVSC-DTVIYRGQPLNSPPSCVRGNADGCS----QGQIGFSHSESEEKKPEPKLT----------LFQLKRRTGNKINSNAWPKVAVKKAKEVMKSGQELWVDGPEAFRSNTDGRQL 570
[Close]
BLAST of Kinesin motor domain protein vs. Planmine SMEST
Match: SMESG000028296.1 (SMESG000028296.1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.064e-19
Identity = 120/510 (23.53%), Postives = 229/510 (44.90%), Query Frame = 3 
Query:  156 DKIFNAVKIHHYREDMSNFAVNAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHE-----MVFVDLLVSAIKRVVNYENSLIISVNR----------GTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISAXXXXXXXX-------XXXXXTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRS--QHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFY-----SFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKK--------------SWDFTDRESEESPKNNNSRMRKCNFHRSGKFS-DSEITSNSEFSCAETVICAKDE-------IRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQL 1532
            D+I   V++    E  S  +++     I+LT  TP++   +S   K F +DSI IHE      +  + L   I+ V N E++ +IS             G+ KS  +     +     WL++Y++    +E+++FS+RISA EI    +        + + +  +++  N  + +    +  R  N   +A      +   +  E+ G  H+  T  +YQ   L+++S  +    SK+ +++L   +     +   +S+  +SK I  L + +    N ++   +    +   NVN Y     S I ++S K+ ++++  Q++QL+ ++ R K +L K                    R ++   +  N   R    +R+   S D + TS+SE SC +TVI            +R N+D  S    + ++ F  S+S+    + +++          +  +K+++  + N++AWPK A++ AK  + +GQELWVDGP  F+      QL
Sbjct:   84 DRIQVFVQLLSCPETSSCLSLDIPNNCISLTNPTPSRKFTASNAPKLFPVDSI-IHEDCPIMEICSNSLGPVIRSVANGEDACVISFGNVLPSDLNPIIGSDKSPNMIG--VMPCAIVWLFNYIQTIRKQEYARFSVRISAAEISGRQENCRDLLLSISNPSSDSSQPLNSSSSLFNSLVELRAVNVEKAAYYLDYALTERSKSEENGLSHMFLTLHLYQY-HLQNDS-GISGGRSKLHIIDLGCGRLSEDVESTALSIQGISKVIYALWSHQRHIPNPDSILAQTLKRL---NVNSYTMMQTSMIIKVSGKETQYNEALQVVQLASKLCRQKTRLSKLSSSTCSDDNSSSSDSFSIRRMTKFRSQFGNDLKRLDRLNRTLSISSDVDATSSSEVSC-DTVIYRGQPLNSPPSCVRGNADGCS----QGQIGFSHSESEEKKPEPKLT----------LFQLKRRTGNKINSNAWPKVAVKKAKEVMKSGQELWVDGPEAFRSNTDGRQL 570
[Close]
BLAST of Kinesin motor domain protein vs. Planmine SMEST
Match: SMESG000028296.1 (SMESG000028296.1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.232e-19
Identity = 120/510 (23.53%), Postives = 229/510 (44.90%), Query Frame = 3 
Query:  156 DKIFNAVKIHHYREDMSNFAVNAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHE-----MVFVDLLVSAIKRVVNYENSLIISVNR----------GTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFSIRISAXXXXXXXX-------XXXXXTKAANEESNLENYISLDSLTCRRCNDLSSAVAFFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRS--QHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFY-----SFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKK--------------SWDFTDRESEESPKNNNSRMRKCNFHRSGKFS-DSEITSNSEFSCAETVICAKDE-------IRRNSDDESMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQL 1532
            D+I   V++    E  S  +++     I+LT  TP++   +S   K F +DSI IHE      +  + L   I+ V N E++ +IS             G+ KS  +     +     WL++Y++    +E+++FS+RISA EI    +        + + +  +++  N  + +    +  R  N   +A      +   +  E+ G  H+  T  +YQ   L+++S  +    SK+ +++L   +     +   +S+  +SK I  L + +    N ++   +    +   NVN Y     S I ++S K+ ++++  Q++QL+ ++ R K +L K                    R ++   +  N   R    +R+   S D + TS+SE SC +TVI            +R N+D  S    + ++ F  S+S+    + +++          +  +K+++  + N++AWPK A++ AK  + +GQELWVDGP  F+      QL
Sbjct:   84 DRIQVFVQLLSCPETSSCLSLDIPNNCISLTNPTPSRKFTASNAPKLFPVDSI-IHEDCPIMEICSNSLGPVIRSVANGEDACVISFGNVLPSDLNPIIGSDKSPNMIG--VMPCAIVWLFNYIQTIRKQEYARFSVRISAAEISGRQENCRDLLLSISNPSSDSSQPLNSSSSLFNSLVELRAVNVEKAAYYLDYALTERSKSEENGLSHMFLTLHLYQY-HLQNDS-GISGGRSKLHIIDLGCGRLSEDVESTALSIQGISKVIYALWSHQRHIPNPDSILAQTLKRL---NVNSYTMMQTSMIIKVSGKETQYNEALQVVQLASKLCRQKTRLSKLSSSTCSDDNSSSSDSFSIRRMTKFRSQFGNDLKRLDRLNRTLSISSDVDATSSSEVSC-DTVIYRGQPLNSPPSCVRGNADGCS----QGQIGFSHSESEEKKPEPKLT----------LFQLKRRTGNKINSNAWPKVAVKKAKEVMKSGQELWVDGPEAFRSNTDGRQL 570
[Close]
BLAST of Kinesin motor domain protein vs. Planmine SMEST
Match: SMESG000051203.1 (SMESG000051203.1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.049e-17
Identity = 100/361 (27.70%), Postives = 169/361 (46.81%), Query Frame = 3 
Query:  726 LYTFQIYQQTSLKSESCSVFSKCSKIFLLNLDLTKCRSQ-HNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNVNFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFT--DRESEESPKNNNSRMRKCNFHRSGKFS-----------DSEITSNSEFSCAETVICAKDEIRRNSD-DESMISRRLRLAFISSDSDSGCKDIRMSQS-SYSRDGTPVNTIKKKSHPRTNAHAWPKSAIRMAKTTILNGQELWVDGP-IVFQKTDSNSQLPNQSTSTISTPETVKQVLGTSNKFSKTLKSQETQYE------------YQKLNTNDSKPDFHPLSDITEITDELE 1721
            LY  ++        +S +V SK S++ LL+L   +  ++    +SL  +SK I  L   +      EN   ++  +   +N    + +  IS+K++ +S+T Q++QL+ ++ R+++K  +S  F+  D  S  S  ++  + R+   H     +           + ++TS SE SC ETVI   D     SD     +S + +L  +SSDSD+G  D+  S+S +Y+   +   TI+ +  PRTNA AWP S    +  +I +  E WVDGP  V+   +  + + +         E    ++        T+ S+ETQ +                NT D K D  PLSDI+E T+E E
Sbjct:  215 LYHCRVDAVAERNCDSNNVTSKKSRLILLDLGSGRHGNEDQQILSLQGISKVILALYTSQRHVPYKENVLTQLLKDTLNQNFT-TTMLLHISSKEQHYSETLQVVQLAYKLYRMRLKKYRSVGFSVSDETSSCSSSSSGLQSRRLRPHMGIGAARRSSGNSSASSEVDLTSASELSCCETVIFKGDTNHSLSDKSPDRMSGKRKLRSVSSDSDNGFSDMEKSKSLAYNSGNSLSPTIRHRMSPRTNARAWP-STNDSSNCSIEHSSETWVDGPKAVYNAANGGNPILDDRNYMNKVTEIGMNIVQDLT-VKPTMISKETQCDDVWDSGSSITDGSSHSNTLDRK-DHRPLSDISECTEETE 571
The following BLAST results are available for this feature:
BLAST of Kinesin motor domain protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267GJP53.355e-1122.65Kinesin motor domain-containing protein (Fragment)... [more]
A0A1I8I4F27.728e-922.38Kinesin motor domain-containing protein OS=Macrost... [more]
A0A267GW498.284e-922.38Kinesin motor domain-containing protein OS=Macrost... [more]
A0A5S6Q0866.664e-723.37Uncharacterized protein OS=Trichuris muris OX=7041... [more]
A0A0V1IU976.845e-722.05Kinesin-like protein KIF26A OS=Trichinella pseudos... [more]
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BLAST of Kinesin motor domain protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Kinesin motor domain protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000075721.10.000e+0100.00SMESG000075721.1[more]
SMESG000028296.11.960e-1923.53SMESG000028296.1[more]
SMESG000028296.12.064e-1923.53SMESG000028296.1[more]
SMESG000028296.12.232e-1923.53SMESG000028296.1[more]
SMESG000051203.11.049e-1727.70SMESG000051203.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30035448 ID=SMED30035448|Name=Kinesin motor domain protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3574bp
TAAGATTTCAAATTTGGATTGTTTTTGAATTCATCACGCAACATTGATTT
ATTGAAGAAAAGAAAATAATGGAAAATTTTCAAATCTCAAATAACGTTAT
ACCGATTGCTTTGGAAAGTGTAACCGATGAGTTTTGCAATTTTAAATCGT
TTCGTGATAAAATATTTAACGCAGTGAAAATCCATCATTATAGAGAAGAT
ATGAGCAACTTTGCGGTAAATGCAAAAACCAAAAGTATCACTTTAACTCC
ACAAACTCCGAATCAATCCCATTTCAGTTCGAAAGTTTTGAAAACTTTTC
TCTTGGACTCAATATCAATTCATGAAATGGTTTTTGTGGATCTTCTTGTG
TCGGCAATCAAACGCGTTGTTAACTATGAAAATTCGCTTATCATTTCAGT
AAACAGAGGAACAAGAAAAAGTTCCAAGTTGTGGAATAAAGAATTTTTGG
AGACCCTCACAACTTGGTTGTATCACTACTTGAAACTTTGTGAAGATAAA
GAACATTCGAAATTCTCGATTAGGATTTCTGCTTTGGAAATTGATGAAGA
AAATGATGAGTTGATAGATTTAACTAAGGCCGCAAACGAGGAAAGTAACT
TAGAAAACTATATTAGTTTGGACAGTTTGACTTGCCGTCGATGCAATGAT
TTGAGTTCTGCTGTAGCATTTTTTAATGAAATAAAAAACCCAAATATTAA
GGAAGACAAAGGCCGGAAACACGTTTTATACACTTTTCAAATATATCAAC
AAACGAGTTTAAAATCAGAGTCTTGTTCAGTATTTTCCAAGTGTTCAAAA
ATCTTTCTCCTCAATCTCGATCTAACAAAATGTCGCAGTCAACACAATCC
CATGTCGTTGCCGTTTCTGTCGAAATTCATCACGACTTTAATTAACAAGG
AAAACAAACGGATAAATTGTGAAAATAAATTCCAGAAAGTTTTTTCGGAA
ATCTTTCAGAAAAATGTCAACTTCTATTCGTTTATAACTCAGATCTCTGC
GAAAGATAAAAAGTTCTCTGATACTTATCAACTGTTGCAACTGTCGGGCA
GAATTCAGAGATTGAAAATCAAATTGAAAAAATCTTGGGATTTTACGGAC
CGTGAATCTGAAGAGAGTCCAAAAAATAACAATTCTAGAATGAGGAAATG
CAATTTCCATCGATCCGGAAAGTTTTCCGATTCAGAAATCACTTCGAATA
GTGAATTTTCATGCGCAGAAACCGTAATATGCGCTAAAGACGAAATACGT
CGGAATAGTGATGACGAGTCGATGATTTCTCGGCGATTACGACTGGCCTT
TATTTCATCAGATTCAGACTCAGGTTGTAAAGACATCAGAATGTCTCAAT
CGAGTTATTCCAGAGATGGAACTCCGGTTAATACAATTAAAAAGAAATCT
CACCCACGAACAAATGCTCATGCTTGGCCGAAATCAGCAATACGAATGGC
AAAAACCACAATATTAAACGGCCAGGAGTTATGGGTAGACGGACCGATAG
TTTTCCAAAAGACAGATAGCAACTCTCAACTCCCAAACCAATCTACCAGT
ACAATATCAACGCCGGAAACTGTAAAGCAAGTATTAGGCACTTCAAATAA
GTTTAGTAAGACACTTAAATCACAGGAAACCCAATATGAATACCAGAAAC
TCAATACAAACGATTCCAAGCCTGATTTCCATCCGCTTTCAGACATCACT
GAAATTACAGACGAATTGGAATTAATAAAACAAACAAACGAATTCATTGG
GTTGTCCGATGTCAGCTACAACAGTCTCAATTCCAGAATTTCTCAGAACA
AACTCAATTTGCAAAGCGAACAAATGAACCAGTCAATTCTATCACCGAAA
AACGACGTGAGAAAGGTTTCCCGATGGATTAATGATGTCAATCAACTGAC
AGCTTCCCAGGTTCCATTATCGAAATCATTCCACGAGCAATTTATGCCCA
AGCAATATCTGCAACCGATACTGAATTCATCCTCCTCAAACAGTCACAGC
TATCAGTACTATGATCCTGACAGTCAAGATGACTACAGTAGCTATCCCAG
ATTATATTCTCCCGTCCAGTCTATCTTGCCAGTCACGAAGAACGACTCGA
AACAGATCAGTTATGTCAATGAAGATGAACAGAAAAATGTTTTAATCAGC
GATAAGAAGTTATTTAATAGATACAAGAAAAAAGAATCCAATACTAATGA
CTCAAAAGATAATTCGAAATTGCGCTCATTTATGTCCAAGAGTCCTCTAG
GAATTTTAAAGAAAACCTTATTCCAAAGTAAATCATCCAAAAAGAAAACT
GAAATTCCCGAATATCTAACTGAACCAAATACCAGTATATCAGCTAGTCA
GGAAATCCGGTACCTGATGCCAGCAATGCATCTTGAAGACAGCTCAGATT
CCAGTAGTGACAGTGAATGCAATGAATGGTTCAGAAATATCAAGACTTTT
AAAAATAAACTGGACACATCTACCAATAAATACTCATCACTTCGACCACC
AAGTGCTCCTTTGTTAGCTGGATCTGGATCTATAATGAATTCTCAGCATT
CAACTAGACAAAGATCCAGTAGCAGTGGATATGGAAGTGTCATCACGAAA
GACAGTGAAATATCTTCCCATATTGACTCGAACAGTGATCAGTCCATTCA
CAGTTTTTCTAAGCCAACAATTAAACAATCGACTTCATTTAGCCAAACAA
GAACTGTCGGTTCTGGCCAAAATGAACTCGATTCTGATGTCATTGCACAA
AGATGTGAAAATCTTGTGAAACAAGAGAAAGCGCTTCTTTTAATGCAACA
TCAAGAATTAATGATCCAAGACTTTTACTCGACGACTCGGCCGATGCTGA
CAAATGACGACTCCAAATATACTTTAAGAATGTCTACAGTAAATTATGAT
CGCCTTTCATACGACAACCAATACTTGGAAGAACTAGAAGAGGACACCAA
CATCATAAGAGACTCCATTGCCTTCTATAAAAGTCTCGTTCATTTGGAAT
CGAGTTTCCTAAGCTCGCCTGAACGTCATAGAAAACTGTTAAATTGATAA
TGAAAATAGACATTTCATTTTGTAATTTCGTGTAAAGATGTATTTCACTC
ACATTTATATATACATACATACATACATATATATAGAAGATAAAATATTG
AAGATTTAATGGCGGGGCATTAAAATAAACCTAGACTGCTGAACATTATA
AATGCTCAGAAGTAGATGAAGAAAGTAATTTAGATACTCAATGAATTTAT
TCGACATCGAGAGCAAAATAAGCAGTGATAGTGAAAATGAAAATATTTTG
AATTTACTTGTACGAAAAAAAATAAGAAGATTACTTTCGTATTCCGATGA
GAGTGATGAGCAAAATGGATTAAGTGATGACGGAACTGTATAGAGAAAAA
TAAATGAAGAACACAGTTCTGATAGACGAGTATATTCCTTTATTTTCAAG
GAAAATAATGGTCTCACAGGTTAAGCAAAGAAAAAAATGATGAAAGATAA
AGGAATTATTAAGTACATGACAATAAGTACAGAACGAGAGGCTCCGCAAG
TTTTGAAAATAGAATGAAAGCTAA
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protein sequence of SMED30035448-orf-1

>SMED30035448-orf-1 ID=SMED30035448-orf-1|Name=SMED30035448-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=993bp
MENFQISNNVIPIALESVTDEFCNFKSFRDKIFNAVKIHHYREDMSNFAV
NAKTKSITLTPQTPNQSHFSSKVLKTFLLDSISIHEMVFVDLLVSAIKRV
VNYENSLIISVNRGTRKSSKLWNKEFLETLTTWLYHYLKLCEDKEHSKFS
IRISALEIDEENDELIDLTKAANEESNLENYISLDSLTCRRCNDLSSAVA
FFNEIKNPNIKEDKGRKHVLYTFQIYQQTSLKSESCSVFSKCSKIFLLNL
DLTKCRSQHNPMSLPFLSKFITTLINKENKRINCENKFQKVFSEIFQKNV
NFYSFITQISAKDKKFSDTYQLLQLSGRIQRLKIKLKKSWDFTDRESEES
PKNNNSRMRKCNFHRSGKFSDSEITSNSEFSCAETVICAKDEIRRNSDDE
SMISRRLRLAFISSDSDSGCKDIRMSQSSYSRDGTPVNTIKKKSHPRTNA
HAWPKSAIRMAKTTILNGQELWVDGPIVFQKTDSNSQLPNQSTSTISTPE
TVKQVLGTSNKFSKTLKSQETQYEYQKLNTNDSKPDFHPLSDITEITDEL
ELIKQTNEFIGLSDVSYNSLNSRISQNKLNLQSEQMNQSILSPKNDVRKV
SRWINDVNQLTASQVPLSKSFHEQFMPKQYLQPILNSSSSNSHSYQYYDP
DSQDDYSSYPRLYSPVQSILPVTKNDSKQISYVNEDEQKNVLISDKKLFN
RYKKKESNTNDSKDNSKLRSFMSKSPLGILKKTLFQSKSSKKKTEIPEYL
TEPNTSISASQEIRYLMPAMHLEDSSDSSSDSECNEWFRNIKTFKNKLDT
STNKYSSLRPPSAPLLAGSGSIMNSQHSTRQRSSSSGYGSVITKDSEISS
HIDSNSDQSIHSFSKPTIKQSTSFSQTRTVGSGQNELDSDVIAQRCENLV
KQEKALLLMQHQELMIQDFYSTTRPMLTNDDSKYTLRMSTVNYDRLSYDN
QYLEELEEDTNIIRDSIAFYKSLVHLESSFLSSPERHRKLLN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0000166nucleotide binding
GO:0003777microtubule motor activity
GO:0005524ATP binding
GO:0008017microtubule binding
Vocabulary: biological process
TermDefinition
GO:0007018microtubule-based movement
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000418head
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..884
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 133..343