SMED30035396
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035396 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Alignments
SMED30035396 aligns in the following genomic locations:
Homology
BLAST of SMED30035396 vs. Ensembl Human
Match: KCNC1 (potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]) HSP 1 Score: 200.675 bits (509), Expect = 2.878e-57 Identity = 142/455 (31.21%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R IFC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. Ensembl Human
Match: KCNC1 (potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]) HSP 1 Score: 201.06 bits (510), Expect = 9.495e-57 Identity = 142/455 (31.21%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R IFC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. Ensembl Human
Match: KCND3 (potassium voltage-gated channel subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:6239]) HSP 1 Score: 182.57 bits (462), Expect = 1.121e-49 Identity = 139/446 (31.17%), Postives = 221/446 (49.55%), Query Frame = -1 Query: 136 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH-NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYK-KSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV--NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGAN 1461 + + ++ +NV G RF+ + T++ P EK N+ EYFFDRDPEVF+CVLN R G++H P C ++ E+ +GI + + CC + + N E+ SE+ + S+ +S FRQ +W+ E P +S+LAL++ V + + VV TV +VP + + +R Y A F + V I T + + R + I S +IIDV++++P+Y L+ + E + F L + V R F+ R +G ++L YT+K A++L ++ + +A+++F++V+FY E S F +IP SFW+ IVT+TT GYGDMVPKT G + ICSL GVL+IA VP++V+NF Y + +RA K + R + KT +N Sbjct: 35 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGI-LPEIIGDCCYEEYKD-----RKRENAERLMDDNDSENNQESMPSLS-FRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGER------YSVAFFC--LDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFV-----------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY---------------HQNQRADKRRAQKKARLARIRVAKTGSSN 439
BLAST of SMED30035396 vs. Ensembl Human
Match: KCND3 (potassium voltage-gated channel subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:6239]) HSP 1 Score: 182.57 bits (462), Expect = 1.121e-49 Identity = 139/446 (31.17%), Postives = 221/446 (49.55%), Query Frame = -1 Query: 136 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH-NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYK-KSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV--NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGAN 1461 + + ++ +NV G RF+ + T++ P EK N+ EYFFDRDPEVF+CVLN R G++H P C ++ E+ +GI + + CC + + N E+ SE+ + S+ +S FRQ +W+ E P +S+LAL++ V + + VV TV +VP + + +R Y A F + V I T + + R + I S +IIDV++++P+Y L+ + E + F L + V R F+ R +G ++L YT+K A++L ++ + +A+++F++V+FY E S F +IP SFW+ IVT+TT GYGDMVPKT G + ICSL GVL+IA VP++V+NF Y + +RA K + R + KT +N Sbjct: 35 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGI-LPEIIGDCCYEEYKD-----RKRENAERLMDDNDSENNQESMPSLS-FRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGER------YSVAFFC--LDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFV-----------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY---------------HQNQRADKRRAQKKARLARIRVAKTGSSN 439
BLAST of SMED30035396 vs. Ensembl Human
Match: KCND3 (potassium voltage-gated channel subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:6239]) HSP 1 Score: 182.57 bits (462), Expect = 1.506e-49 Identity = 139/446 (31.17%), Postives = 221/446 (49.55%), Query Frame = -1 Query: 136 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH-NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYK-KSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV--NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGAN 1461 + + ++ +NV G RF+ + T++ P EK N+ EYFFDRDPEVF+CVLN R G++H P C ++ E+ +GI + + CC + + N E+ SE+ + S+ +S FRQ +W+ E P +S+LAL++ V + + VV TV +VP + + +R Y A F + V I T + + R + I S +IIDV++++P+Y L+ + E + F L + V R F+ R +G ++L YT+K A++L ++ + +A+++F++V+FY E S F +IP SFW+ IVT+TT GYGDMVPKT G + ICSL GVL+IA VP++V+NF Y + +RA K + R + KT +N Sbjct: 35 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGI-LPEIIGDCCYEEYKD-----RKRENAERLMDDNDSENNQESMPSLS-FRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGER------YSVAFFC--LDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFV-----------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY---------------HQNQRADKRRAQKKARLARIRVAKTGSSN 439
BLAST of SMED30035396 vs. Ensembl Celegans
Match: shw-1 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:Q8I4L3]) HSP 1 Score: 207.223 bits (526), Expect = 3.993e-60 Identity = 155/528 (29.36%), Postives = 260/528 (49.24%), Query Frame = -1 Query: 64 PFSMKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLT------NSMMRIKNL---------RNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEI---------------------KRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEV--PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGH-IKRALGKVKQIR-KKSKKTKGANHRHCNSSSENVTVFTIMEESESVK 1521 P + F P RR + V +NV G+R + + + +K+IP + L L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ N+VE CC M T +++ I++L K F + + ++ + +W + ++P SS A + S++ ++ F++ T S F I +++ + VTS P+ ++ +I I +I +L+ R++FC + + S TIIDV+S F++ + I QT G+ + L + VLR F++ + + G ++L+ T K SA +L L++ FV++A+++F+++++Y E D+ F +IP WW +VTI+T G+GDMVPKT LG LV +C+L GVL IA VP++V+NF Y+H+ ++ + L+ H +K AL VKQ K KK+ A ++ +N M ++ + K Sbjct: 3 PALLAFFKPAEMASPQRRESWMDTEHRVILNVGGIRHETYSHVLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMILNYYRTGKLHYPTNVCGPLFEEELEFWGLD-ANQVEPCCWMTYTQHRDTQDTLAVIESLDLDGDPPTQEEIAKKFGWEDDYYTGNMSQWQRLKPRVWALFDEPWSSKYARVISSLSVAFILASTCSFILKTDPS--FQIPDIDVFYSLRVVDEGGFKNYHKTIGTDKPVTS-PHPNFFYVDLICNIWFTI---ELLIRSLFCPSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQT--------GSLVTLDFLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAIVIFAALVYYAERSQLNKDNQFTSIPLGLWWSLVTISTVGFGDMVPKTYLGMLVGSLCALMGVLTIALPVPVIVSNFSNLYSHSQARAK--LPKKRRRVLQAHEVKPALLGVKQHHGKHRKKSSSATFNQPPANFKNANGGPSMHDNSASK 513
BLAST of SMED30035396 vs. Ensembl Celegans
Match: shw-1 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:Q8I4L3]) HSP 1 Score: 202.216 bits (513), Expect = 2.098e-58 Identity = 150/501 (29.94%), Postives = 253/501 (50.50%), Query Frame = -1 Query: 64 VKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLT------NSMMRIKNL---------RNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEI---------------------KRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEV--PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGH-IKRALGKVKQIR-KKSKKTKGANHRHCNSSSENVTVFTIMEESESVK 1440 V +NV G+R + + + +K+IP + L L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ N+VE CC M T +++ I++L K F + + ++ + +W + ++P SS A + S++ ++ F++ T S F I +++ + VTS P+ ++ +I I +I +L+ R++FC + + S TIIDV+S F++ + I QT G+ + L + VLR F++ + + G ++L+ T K SA +L L++ FV++A+++F+++++Y E D+ F +IP WW +VTI+T G+GDMVPKT LG LV +C+L GVL IA VP++V+NF Y+H+ ++ + L+ H +K AL VKQ K KK+ A ++ +N M ++ + K Sbjct: 7 VILNVGGIRHETYSHVLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMILNYYRTGKLHYPTNVCGPLFEEELEFWGLD-ANQVEPCCWMTYTQHRDTQDTLAVIESLDLDGDPPTQEEIAKKFGWEDDYYTGNMSQWQRLKPRVWALFDEPWSSKYARVISSLSVAFILASTCSFILKTDPS--FQIPDIDVFYSLRVVDEGGFKNYHKTIGTDKPVTS-PHPNFFYVDLICNIWFTI---ELLIRSLFCPSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQT--------GSLVTLDFLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAIVIFAALVYYAERSQLNKDNQFTSIPLGLWWSLVTISTVGFGDMVPKTYLGMLVGSLCALMGVLTIALPVPVIVSNFSNLYSHSQARAK--LPKKRRRVLQAHEVKPALLGVKQHHGKHRKKSSSATFNQPPANFKNANGGPSMHDNSASK 490
BLAST of SMED30035396 vs. Ensembl Celegans
Match: shw-1 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:Q8I4L3]) HSP 1 Score: 202.216 bits (513), Expect = 2.098e-58 Identity = 150/501 (29.94%), Postives = 253/501 (50.50%), Query Frame = -1 Query: 64 VKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLT------NSMMRIKNL---------RNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEI---------------------KRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEV--PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGH-IKRALGKVKQIR-KKSKKTKGANHRHCNSSSENVTVFTIMEESESVK 1440 V +NV G+R + + + +K+IP + L L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ N+VE CC M T +++ I++L K F + + ++ + +W + ++P SS A + S++ ++ F++ T S F I +++ + VTS P+ ++ +I I +I +L+ R++FC + + S TIIDV+S F++ + I QT G+ + L + VLR F++ + + G ++L+ T K SA +L L++ FV++A+++F+++++Y E D+ F +IP WW +VTI+T G+GDMVPKT LG LV +C+L GVL IA VP++V+NF Y+H+ ++ + L+ H +K AL VKQ K KK+ A ++ +N M ++ + K Sbjct: 7 VILNVGGIRHETYSHVLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMILNYYRTGKLHYPTNVCGPLFEEELEFWGLD-ANQVEPCCWMTYTQHRDTQDTLAVIESLDLDGDPPTQEEIAKKFGWEDDYYTGNMSQWQRLKPRVWALFDEPWSSKYARVISSLSVAFILASTCSFILKTDPS--FQIPDIDVFYSLRVVDEGGFKNYHKTIGTDKPVTS-PHPNFFYVDLICNIWFTI---ELLIRSLFCPSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQT--------GSLVTLDFLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAIVIFAALVYYAERSQLNKDNQFTSIPLGLWWSLVTISTVGFGDMVPKTYLGMLVGSLCALMGVLTIALPVPVIVSNFSNLYSHSQARAK--LPKKRRRVLQAHEVKPALLGVKQHHGKHRKKSSSATFNQPPANFKNANGGPSMHDNSASK 490
BLAST of SMED30035396 vs. Ensembl Celegans
Match: shw-1 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:Q8I4L3]) HSP 1 Score: 202.601 bits (514), Expect = 2.146e-58 Identity = 156/522 (29.89%), Postives = 262/522 (50.19%), Query Frame = -1 Query: 64 YRRTGD-SEESSV--------VKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLT------NSMMRIKNL---------RNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEI---------------------KRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEV--PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGH-IKRALGKVKQIR-KKSKKTKGANHRHCNSSSENVTVFTIMEESESVK 1476 YRR + S E+S+ V +NV G+R + + + +K+IP + L L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ N+VE CC M T +++ I++L K F + + ++ + +W + ++P SS A + S++ ++ F++ T S F I +++ + VTS P+ ++ +I I +I +L+ R++FC + + S TIIDV+S F++ + I QT G+ + L + VLR F++ + + G ++L+ T K SA +L L++ FV++A+++F+++++Y E D+ F +IP WW +VTI+T G+GDMVPKT LG LV +C+L GVL IA VP++V+NF Y+H+ ++ + L+ H +K AL VKQ K KK+ A ++ +N M ++ + K Sbjct: 6 YRRARENSNETSLSWMDTEHRVILNVGGIRHETYSHVLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMILNYYRTGKLHYPTNVCGPLFEEELEFWGLD-ANQVEPCCWMTYTQHRDTQDTLAVIESLDLDGDPPTQEEIAKKFGWEDDYYTGNMSQWQRLKPRVWALFDEPWSSKYARVISSLSVAFILASTCSFILKTDPS--FQIPDIDVFYSLRVVDEGGFKNYHKTIGTDKPVTS-PHPNFFYVDLICNIWFTI---ELLIRSLFCPSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQT--------GSLVTLDFLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAIVIFAALVYYAERSQLNKDNQFTSIPLGLWWSLVTISTVGFGDMVPKTYLGMLVGSLCALMGVLTIALPVPVIVSNFSNLYSHSQARAK--LPKKRRRVLQAHEVKPALLGVKQHHGKHRKKSSSATFNQPPANFKNANGGPSMHDNSASK 510
BLAST of SMED30035396 vs. Ensembl Celegans
Match: shw-1 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:Q8I4L3]) HSP 1 Score: 202.986 bits (515), Expect = 2.335e-58 Identity = 152/512 (29.69%), Postives = 257/512 (50.20%), Query Frame = -1 Query: 64 RRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLT------NSMMRIKNL---------RNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEI---------------------KRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEV--PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGH-IKRALGKVKQIR-KKSKKTKGANHRHCNSSSENVTVFTIMEESESVK 1473 R+T + V +NV G+R + + + +K+IP + L L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ N+VE CC M T +++ I++L K F + + ++ + +W + ++P SS A + S++ ++ F++ T S F I +++ + VTS P+ ++ +I I +I +L+ R++FC + + S TIIDV+S F++ + I QT G+ + L + VLR F++ + + G ++L+ T K SA +L L++ FV++A+++F+++++Y E D+ F +IP WW +VTI+T G+GDMVPKT LG LV +C+L GVL IA VP++V+NF Y+H+ ++ + L+ H +K AL VKQ K KK+ A ++ +N M ++ + K Sbjct: 46 RKTSWMDTEHRVILNVGGIRHETYSHVLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMILNYYRTGKLHYPTNVCGPLFEEELEFWGLD-ANQVEPCCWMTYTQHRDTQDTLAVIESLDLDGDPPTQEEIAKKFGWEDDYYTGNMSQWQRLKPRVWALFDEPWSSKYARVISSLSVAFILASTCSFILKTDPS--FQIPDIDVFYSLRVVDEGGFKNYHKTIGTDKPVTS-PHPNFFYVDLICNIWFTI---ELLIRSLFCPSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQT--------GSLVTLDFLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAIVIFAALVYYAERSQLNKDNQFTSIPLGLWWSLVTISTVGFGDMVPKTYLGMLVGSLCALMGVLTIALPVPVIVSNFSNLYSHSQARAK--LPKKRRRVLQAHEVKPALLGVKQHHGKHRKKSSSATFNQPPANFKNANGGPSMHDNSASK 540
BLAST of SMED30035396 vs. Ensembl Fly
Match: Shaw (gene:FBgn0003386 transcript:FBtr0089274) HSP 1 Score: 197.978 bits (502), Expect = 9.479e-57 Identity = 138/436 (31.65%), Postives = 220/436 (50.46%), Query Frame = -1 Query: 262 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFY---KKSESE------------RNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTS----------LPYVKADFIQIIYYITV---SILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLI----ASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSH--FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTH 1461 DSE V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF VLN R G++H P +CGPLF E++ WG+ N+VE CC M T + L ++ K SE E + +I + IW + ++P SS+ A V + + F + T + ++ I RN+T L + + +YI + TF+++ R I N I S IID ++ + FY +L+ AS++E D+++ I ++R F++ R G ++L+ T + SA +L L++ F+++ +++F+S+++Y E P+ H F +IP WW +VT+TT GYGDM PKT +G V +C+L GVL IA VP++V+NF +YY+H Sbjct: 7 DSENRVV--LNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM-----RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENA------------DILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSH 422
BLAST of SMED30035396 vs. Ensembl Fly
Match: Shaw (gene:FBgn0003386 transcript:FBtr0332184) HSP 1 Score: 198.364 bits (503), Expect = 1.000e-56 Identity = 138/436 (31.65%), Postives = 220/436 (50.46%), Query Frame = -1 Query: 262 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFY---KKSESE------------RNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTS----------LPYVKADFIQIIYYITV---SILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLI----ASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSH--FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTH 1461 DSE V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF VLN R G++H P +CGPLF E++ WG+ N+VE CC M T + L ++ K SE E + +I + IW + ++P SS+ A V + + F + T + ++ I RN+T L + + +YI + TF+++ R I N I S IID ++ + FY +L+ AS++E D+++ I ++R F++ R G ++L+ T + SA +L L++ F+++ +++F+S+++Y E P+ H F +IP WW +VT+TT GYGDM PKT +G V +C+L GVL IA VP++V+NF +YY+H Sbjct: 7 DSENRVV--LNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM-----RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENA------------DILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSH 422
BLAST of SMED30035396 vs. Ensembl Fly
Match: Shaw (gene:FBgn0003386 transcript:FBtr0332185) HSP 1 Score: 199.134 bits (505), Expect = 2.199e-56 Identity = 138/436 (31.65%), Postives = 220/436 (50.46%), Query Frame = -1 Query: 262 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFY---KKSESE------------RNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTS----------LPYVKADFIQIIYYITV---SILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLI----ASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSH--FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTH 1461 DSE V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF VLN R G++H P +CGPLF E++ WG+ N+VE CC M T + L ++ K SE E + +I + IW + ++P SS+ A V + + F + T + ++ I RN+T L + + +YI + TF+++ R I N I S IID ++ + FY +L+ AS++E D+++ I ++R F++ R G ++L+ T + SA +L L++ F+++ +++F+S+++Y E P+ H F +IP WW +VT+TT GYGDM PKT +G V +C+L GVL IA VP++V+NF +YY+H Sbjct: 7 DSENRVV--LNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM-----RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENA------------DILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSH 422
BLAST of SMED30035396 vs. Ensembl Fly
Match: Shaw (gene:FBgn0003386 transcript:FBtr0089275) HSP 1 Score: 199.134 bits (505), Expect = 2.563e-56 Identity = 138/436 (31.65%), Postives = 220/436 (50.46%), Query Frame = -1 Query: 262 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFY---KKSESE------------RNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTS----------LPYVKADFIQIIYYITV---SILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLI----ASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSH--FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTH 1461 DSE V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF VLN R G++H P +CGPLF E++ WG+ N+VE CC M T + L ++ K SE E + +I + IW + ++P SS+ A V + + F + T + ++ I RN+T L + + +YI + TF+++ R I N I S IID ++ + FY +L+ AS++E D+++ I ++R F++ R G ++L+ T + SA +L L++ F+++ +++F+S+++Y E P+ H F +IP WW +VT+TT GYGDM PKT +G V +C+L GVL IA VP++V+NF +YY+H Sbjct: 7 DSENRVV--LNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM-----RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENA------------DILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSH 422
BLAST of SMED30035396 vs. Ensembl Fly
Match: Shaw (gene:FBgn0003386 transcript:FBtr0289989) HSP 1 Score: 199.519 bits (506), Expect = 2.765e-56 Identity = 138/436 (31.65%), Postives = 220/436 (50.46%), Query Frame = -1 Query: 262 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFY---KKSESE------------RNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTS----------LPYVKADFIQIIYYITV---SILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLI----ASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSH--FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTH 1461 DSE V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF VLN R G++H P +CGPLF E++ WG+ N+VE CC M T + L ++ K SE E + +I + IW + ++P SS+ A V + + F + T + ++ I RN+T L + + +YI + TF+++ R I N I S IID ++ + FY +L+ AS++E D+++ I ++R F++ R G ++L+ T + SA +L L++ F+++ +++F+S+++Y E P+ H F +IP WW +VT+TT GYGDM PKT +G V +C+L GVL IA VP++V+NF +YY+H Sbjct: 22 DSENRVV--LNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM-----RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENA------------DILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSH 437
BLAST of SMED30035396 vs. Ensembl Zebrafish
Match: kcnc4 (potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]) HSP 1 Score: 199.519 bits (506), Expect = 1.548e-56 Identity = 145/490 (29.59%), Postives = 238/490 (48.57%), Query Frame = -1 Query: 100 EESSVVKINVRGVRFKVFWNTIKEIPG-----LSKTILEKGLHNKT-----KNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERN-------------SIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKA----DFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYY--NLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVT 1455 E+S + INV G R + + +T++ IPG L+ T + T +E+FFDR P +F VLN R G++H P +CGPLF E+ WGI E VE CC M + L FE + +E +++ S C ++ IW + E P SS A + + V ++ + F + T + + K S ++ + ++ I V TF+ + R I C N I + IID ++++PFY +LI + + + F ++V+ +LR F++ R + G +VL +T++ S N+ L+++F+ + +L+F+++I+Y E PD +HF NIP FWW +VT+TT GYGDMVPKT LG +V +C++ GVL IA VP++VNNF +YY+ A + +N G + + G + S + + ++ EN+T Sbjct: 33 EDSDKIIINVGGTRHETYRSTLRTIPGSRLAWLADTDSQVNPDADTGQTHPNSEFFFDRHPGIFAYVLNYYRTGKLHCPADVCGPLFEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDIFEPPDPEDAEDDQDMPRRFGIEDSPDRSRGCCEVWQPKIWALFEDPYSSRAARVIAFVSLFFILVSITNFCLETHEAFFEFHNHTDTKSATNSTTIIQVMDTKPVLTVVEGICVVWFTFEFLVRIICCPNKLLFIKNQLNIIDFVAILPFYLERSLIGNTSKAAKDVLGF--------LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASVNEFCLLIIFLALGVLIFATMIYYAERISADPDDPSGCNHTHFKNIPIGFWWAVVTMTTLGYGDMVPKTWLGMIVGALCAIAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHNPNPGMVLDS-GSFGKSESNSPRNSTQSDTCPLAAEENIT 512
BLAST of SMED30035396 vs. Ensembl Zebrafish
Match: kcnc4 (potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]) HSP 1 Score: 199.519 bits (506), Expect = 2.814e-56 Identity = 145/490 (29.59%), Postives = 238/490 (48.57%), Query Frame = -1 Query: 100 EESSVVKINVRGVRFKVFWNTIKEIPG-----LSKTILEKGLHNKT-----KNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERN-------------SIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKA----DFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYY--NLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVT 1455 E+S + INV G R + + +T++ IPG L+ T + T +E+FFDR P +F VLN R G++H P +CGPLF E+ WGI E VE CC M + L FE + +E +++ S C ++ IW + E P SS A + + V ++ + F + T + + K S ++ + ++ I V TF+ + R I C N I + IID ++++PFY +LI + + + F ++V+ +LR F++ R + G +VL +T++ S N+ L+++F+ + +L+F+++I+Y E PD +HF NIP FWW +VT+TT GYGDMVPKT LG +V +C++ GVL IA VP++VNNF +YY+ A + +N G + + G + S + + ++ EN+T Sbjct: 33 EDSDKIIINVGGTRHETYRSTLRTIPGSRLAWLADTDSQVNPDADTGQTHPNSEFFFDRHPGIFAYVLNYYRTGKLHCPADVCGPLFEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDIFEPPDPEDAEDDQDMPRRFGIEDSPDRSRGCCEVWQPKIWALFEDPYSSRAARVIAFVSLFFILVSITNFCLETHEAFFEFHNHTDTKSATNSTTIIQVMDTKPVLTVVEGICVVWFTFEFLVRIICCPNKLLFIKNQLNIIDFVAILPFYLERSLIGNTSKAAKDVLGF--------LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASVNEFCLLIIFLALGVLIFATMIYYAERISADPDDPSGCNHTHFKNIPIGFWWAVVTMTTLGYGDMVPKTWLGMIVGALCAIAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHNPNPGMVLDS-GSFGKSESNSPRNSTQSDTCPLAAEENIT 512
BLAST of SMED30035396 vs. Ensembl Zebrafish
Match: kcnc4 (potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]) HSP 1 Score: 199.519 bits (506), Expect = 2.814e-56 Identity = 145/490 (29.59%), Postives = 238/490 (48.57%), Query Frame = -1 Query: 100 EESSVVKINVRGVRFKVFWNTIKEIPG-----LSKTILEKGLHNKT-----KNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERN-------------SIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKA----DFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYY--NLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVT 1455 E+S + INV G R + + +T++ IPG L+ T + T +E+FFDR P +F VLN R G++H P +CGPLF E+ WGI E VE CC M + L FE + +E +++ S C ++ IW + E P SS A + + V ++ + F + T + + K S ++ + ++ I V TF+ + R I C N I + IID ++++PFY +LI + + + F ++V+ +LR F++ R + G +VL +T++ S N+ L+++F+ + +L+F+++I+Y E PD +HF NIP FWW +VT+TT GYGDMVPKT LG +V +C++ GVL IA VP++VNNF +YY+ A + +N G + + G + S + + ++ EN+T Sbjct: 33 EDSDKIIINVGGTRHETYRSTLRTIPGSRLAWLADTDSQVNPDADTGQTHPNSEFFFDRHPGIFAYVLNYYRTGKLHCPADVCGPLFEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDIFEPPDPEDAEDDQDMPRRFGIEDSPDRSRGCCEVWQPKIWALFEDPYSSRAARVIAFVSLFFILVSITNFCLETHEAFFEFHNHTDTKSATNSTTIIQVMDTKPVLTVVEGICVVWFTFEFLVRIICCPNKLLFIKNQLNIIDFVAILPFYLERSLIGNTSKAAKDVLGF--------LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASVNEFCLLIIFLALGVLIFATMIYYAERISADPDDPSGCNHTHFKNIPIGFWWAVVTMTTLGYGDMVPKTWLGMIVGALCAIAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHNPNPGMVLDS-GSFGKSESNSPRNSTQSDTCPLAAEENIT 512
BLAST of SMED30035396 vs. Ensembl Zebrafish
Match: kcnc2 (potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]) HSP 1 Score: 194.512 bits (493), Expect = 8.325e-55 Identity = 146/450 (32.44%), Postives = 225/450 (50.00%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPG------LSKTILEKGL-----------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESER----------NSIKCVSHFRQ---MIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVT----SLPYVKADFIQIIYYITVSIL--TFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD----SH---FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +E V +NV G R + + +T+K +PG S++ LE L ++ NEYFFDR P VF VLN R G++H P +CGPLF E+ WGI E VE CC M + L FE + + E ++ VS +R+ +IW + + P SS A + +M + F + T + I K + RN T S Y + Y V +L TF+ + R F + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ SH F NIP FWW +VT+TT GYGDM P+T G +V +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GKFDERERVILNVGGTRHETYRSTLKTLPGTRLALLASESDLELVLDQLQQVPGFIEYSARSNEYFFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEEELSFWGID-ETDVEPCCWMTYRQHRDAEEALDVFEMNVDTEEDDEYGKRLGIEDVVSADGTVSRWRRWQPVIWNLFDDPYSSRAARFIAFASLFFIMVSITTFCLETHEAFNTIINKTDPLRNETLTDISQQYEIETDPALTYVEGVCVLWFTFEFLVRITFSPDKLEFIKSVLNIIDFVAILPFYLEVGLSGLSSK---------AAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGASPNDPTASHHTMFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMVVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 441
BLAST of SMED30035396 vs. Ensembl Zebrafish
Match: kcnc2 (potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]) HSP 1 Score: 194.512 bits (493), Expect = 1.663e-54 Identity = 146/450 (32.44%), Postives = 225/450 (50.00%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPG------LSKTILEKGL-----------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESER----------NSIKCVSHFRQ---MIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVT----SLPYVKADFIQIIYYITVSIL--TFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD----SH---FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +E V +NV G R + + +T+K +PG S++ LE L ++ NEYFFDR P VF VLN R G++H P +CGPLF E+ WGI E VE CC M + L FE + + E ++ VS +R+ +IW + + P SS A + +M + F + T + I K + RN T S Y + Y V +L TF+ + R F + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ SH F NIP FWW +VT+TT GYGDM P+T G +V +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GKFDERERVILNVGGTRHETYRSTLKTLPGTRLALLASESDLELVLDQLQQVPGFIEYSARSNEYFFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEEELSFWGID-ETDVEPCCWMTYRQHRDAEEALDVFEMNVDTEEDDEYGKRLGIEDVVSADGTVSRWRRWQPVIWNLFDDPYSSRAARFIAFASLFFIMVSITTFCLETHEAFNTIINKTDPLRNETLTDISQQYEIETDPALTYVEGVCVLWFTFEFLVRITFSPDKLEFIKSVLNIIDFVAILPFYLEVGLSGLSSK---------AAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGASPNDPTASHHTMFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMVVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 441
BLAST of SMED30035396 vs. Ensembl Xenopus
Match: tamm41 (TAM41 mitochondrial translocator assembly and maintenance homolog [Source:Xenbase;Acc:XB-GENE-995882]) HSP 1 Score: 208.764 bits (530), Expect = 8.520e-60 Identity = 162/549 (29.51%), Postives = 255/549 (46.45%), Query Frame = -1 Query: 13 FLNRYSTLKPYRRT------GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIK-CVSH----------FRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVST------------VNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIME----ESESVKGNTNYATHRQNCATIDN 1506 F R S KP ++ G +E+S + INV G+R + + +T+K +PG + L + ++ +E+FFDR P+VF VLN R G++H P +CGPL+ E+ WGI E VE CC MN + L +FE + E + + + C+ + +W + E P SS A Y+A F+ + T VN+ + I R T L F+ + I V TF+ + R IFC + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G PD + F NIP FWW +VT+TT GYGDM P T G LV +C+L GVL IA VP++VNNF +YY+ A + HI R K + HR + + I+E +S+ N A ++C TID Sbjct: 10 FRGRKSGNKPPSKSCLKGDMGKNEDSDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKTDEFFFDRHPQVFAYVLNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPTEEEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSK------AARYIAFASLFFILISITTFCLETHEAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSSLNIIDFVAILPFYLEIGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYGDMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRP--PQPGSPNYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQ 534
BLAST of SMED30035396 vs. Ensembl Xenopus
Match: tamm41 (TAM41 mitochondrial translocator assembly and maintenance homolog [Source:Xenbase;Acc:XB-GENE-995882]) HSP 1 Score: 208.764 bits (530), Expect = 9.215e-60 Identity = 162/549 (29.51%), Postives = 255/549 (46.45%), Query Frame = -1 Query: 13 FLNRYSTLKPYRRT------GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIK-CVSH----------FRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVST------------VNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIME----ESESVKGNTNYATHRQNCATIDN 1506 F R S KP ++ G +E+S + INV G+R + + +T+K +PG + L + ++ +E+FFDR P+VF VLN R G++H P +CGPL+ E+ WGI E VE CC MN + L +FE + E + + + C+ + +W + E P SS A Y+A F+ + T VN+ + I R T L F+ + I V TF+ + R IFC + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G PD + F NIP FWW +VT+TT GYGDM P T G LV +C+L GVL IA VP++VNNF +YY+ A + HI R K + HR + + I+E +S+ N A ++C TID Sbjct: 10 FRGRKSGNKPPSKSCLKGDMGKNEDSDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKTDEFFFDRHPQVFAYVLNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPTEEEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSK------AARYIAFASLFFILISITTFCLETHEAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSSLNIIDFVAILPFYLEIGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYGDMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRP--PQPGSPNYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQ 534
BLAST of SMED30035396 vs. Ensembl Xenopus
Match: tamm41 (TAM41 mitochondrial translocator assembly and maintenance homolog [Source:Xenbase;Acc:XB-GENE-995882]) HSP 1 Score: 208.764 bits (530), Expect = 1.136e-59 Identity = 162/549 (29.51%), Postives = 255/549 (46.45%), Query Frame = -1 Query: 13 FLNRYSTLKPYRRT------GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIK-CVSH----------FRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVST------------VNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIME----ESESVKGNTNYATHRQNCATIDN 1506 F R S KP ++ G +E+S + INV G+R + + +T+K +PG + L + ++ +E+FFDR P+VF VLN R G++H P +CGPL+ E+ WGI E VE CC MN + L +FE + E + + + C+ + +W + E P SS A Y+A F+ + T VN+ + I R T L F+ + I V TF+ + R IFC + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G PD + F NIP FWW +VT+TT GYGDM P T G LV +C+L GVL IA VP++VNNF +YY+ A + HI R K + HR + + I+E +S+ N A ++C TID Sbjct: 10 FRGRKSGNKPPSKSCLKGDMGKNEDSDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKTDEFFFDRHPQVFAYVLNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPTEEEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSK------AARYIAFASLFFILISITTFCLETHEAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSSLNIIDFVAILPFYLEIGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYGDMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRPPQPGSP--NYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQ 534
BLAST of SMED30035396 vs. Ensembl Xenopus
Match: tamm41 (TAM41 mitochondrial translocator assembly and maintenance homolog [Source:Xenbase;Acc:XB-GENE-995882]) HSP 1 Score: 209.149 bits (531), Expect = 1.349e-59 Identity = 162/549 (29.51%), Postives = 255/549 (46.45%), Query Frame = -1 Query: 13 FLNRYSTLKPYRRT------GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIK-CVSH----------FRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVST------------VNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIME----ESESVKGNTNYATHRQNCATIDN 1506 F R S KP ++ G +E+S + INV G+R + + +T+K +PG + L + ++ +E+FFDR P+VF VLN R G++H P +CGPL+ E+ WGI E VE CC MN + L +FE + E + + + C+ + +W + E P SS A Y+A F+ + T VN+ + I R T L F+ + I V TF+ + R IFC + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G PD + F NIP FWW +VT+TT GYGDM P T G LV +C+L GVL IA VP++VNNF +YY+ A + HI R K + HR + + I+E +S+ N A ++C TID Sbjct: 10 FRGRKSGNKPPSKSCLKGDMGKNEDSDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKTDEFFFDRHPQVFAYVLNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPTEEEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSK------AARYIAFASLFFILISITTFCLETHEAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSSLNIIDFVAILPFYLEIGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYGDMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRP--PQPGSPNYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQ 534
BLAST of SMED30035396 vs. Ensembl Xenopus
Match: tamm41 (TAM41 mitochondrial translocator assembly and maintenance homolog [Source:Xenbase;Acc:XB-GENE-995882]) HSP 1 Score: 208.764 bits (530), Expect = 1.832e-59 Identity = 162/549 (29.51%), Postives = 255/549 (46.45%), Query Frame = -1 Query: 13 FLNRYSTLKPYRRT------GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIK-CVSH----------FRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVST------------VNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIME----ESESVKGNTNYATHRQNCATIDN 1506 F R S KP ++ G +E+S + INV G+R + + +T+K +PG + L + ++ +E+FFDR P+VF VLN R G++H P +CGPL+ E+ WGI E VE CC MN + L +FE + E + + + C+ + +W + E P SS A Y+A F+ + T VN+ + I R T L F+ + I V TF+ + R IFC + I S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G PD + F NIP FWW +VT+TT GYGDM P T G LV +C+L GVL IA VP++VNNF +YY+ A + HI R K + HR + + I+E +S+ N A ++C TID Sbjct: 10 FRGRKSGNKPPSKSCLKGDMGKNEDSDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKTDEFFFDRHPQVFAYVLNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPTEEEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSK------AARYIAFASLFFILISITTFCLETHEAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSSLNIIDFVAILPFYLEIGLSGLSSK---------AAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYGDMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRP--PQPGSPNYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQ 534
BLAST of SMED30035396 vs. Ensembl Mouse
Match: Kcnc1 (potassium voltage gated channel, Shaw-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96667]) HSP 1 Score: 200.29 bits (508), Expect = 2.480e-57 Identity = 141/455 (30.99%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R +FC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. Ensembl Mouse
Match: Kcnc1 (potassium voltage gated channel, Shaw-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96667]) HSP 1 Score: 200.29 bits (508), Expect = 1.076e-56 Identity = 141/455 (30.99%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R +FC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. Ensembl Mouse
Match: Kcnd3 (potassium voltage-gated channel, Shal-related family, member 3 [Source:MGI Symbol;Acc:MGI:1928743]) HSP 1 Score: 182.57 bits (462), Expect = 6.827e-50 Identity = 139/446 (31.17%), Postives = 221/446 (49.55%), Query Frame = -1 Query: 136 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH-NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYK-KSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV--NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGAN 1461 + + ++ +NV G RF+ + T++ P EK N+ EYFFDRDPEVF+CVLN R G++H P C ++ E+ +GI + + CC + + N E+ SE+ + S+ +S FRQ +W+ E P +S+LAL++ V + + VV TV +VP + + +R Y A F + V I T + + R + I S +IIDV++++P+Y L+ + E + F L + V R F+ R +G ++L YT+K A++L ++ + +A+++F++V+FY E S F +IP SFW+ IVT+TT GYGDMVPKT G + ICSL GVL+IA VP++V+NF Y + +RA K + R + KT +N Sbjct: 35 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGI-LPEIIGDCCYEEYKD-----RKRENAERLMDDNDSENNQESMPSLS-FRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGER------YSVAFFC--LDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFV-----------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY---------------HQNQRADKRRAQKKARLARIRVAKTGSSN 439
BLAST of SMED30035396 vs. Ensembl Mouse
Match: Kcnd3 (potassium voltage-gated channel, Shal-related family, member 3 [Source:MGI Symbol;Acc:MGI:1928743]) HSP 1 Score: 182.57 bits (462), Expect = 8.815e-50 Identity = 139/446 (31.17%), Postives = 221/446 (49.55%), Query Frame = -1 Query: 136 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH-NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYK-KSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV--NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGAN 1461 + + ++ +NV G RF+ + T++ P EK N+ EYFFDRDPEVF+CVLN R G++H P C ++ E+ +GI + + CC + + N E+ SE+ + S+ +S FRQ +W+ E P +S+LAL++ V + + VV TV +VP + + +R Y A F + V I T + + R + I S +IIDV++++P+Y L+ + E + F L + V R F+ R +G ++L YT+K A++L ++ + +A+++F++V+FY E S F +IP SFW+ IVT+TT GYGDMVPKT G + ICSL GVL+IA VP++V+NF Y + +RA K + R + KT +N Sbjct: 35 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGI-LPEIIGDCCYEEYKD-----RKRENAERLMDDNDSENNQESMPSLS-FRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGER------YSVAFFC--LDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFV-----------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY---------------HQNQRADKRRAQKKARLARIRVAKTGSSN 439
BLAST of SMED30035396 vs. Ensembl Mouse
Match: Kcnd3 (potassium voltage-gated channel, Shal-related family, member 3 [Source:MGI Symbol;Acc:MGI:1928743]) HSP 1 Score: 182.57 bits (462), Expect = 8.815e-50 Identity = 139/446 (31.17%), Postives = 221/446 (49.55%), Query Frame = -1 Query: 136 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH-NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYK-KSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV--NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGAN 1461 + + ++ +NV G RF+ + T++ P EK N+ EYFFDRDPEVF+CVLN R G++H P C ++ E+ +GI + + CC + + N E+ SE+ + S+ +S FRQ +W+ E P +S+LAL++ V + + VV TV +VP + + +R Y A F + V I T + + R + I S +IIDV++++P+Y L+ + E + F L + V R F+ R +G ++L YT+K A++L ++ + +A+++F++V+FY E S F +IP SFW+ IVT+TT GYGDMVPKT G + ICSL GVL+IA VP++V+NF Y + +RA K + R + KT +N Sbjct: 35 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGI-LPEIIGDCCYEEYKD-----RKRENAERLMDDNDSENNQESMPSLS-FRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGER------YSVAFFC--LDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFV-----------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY---------------HQNQRADKRRAQKKARLARIRVAKTGSSN 439
BLAST of SMED30035396 vs. UniProt/SwissProt
Match: sp|P48547|KCNC1_HUMAN (Potassium voltage-gated channel subfamily C member 1 OS=Homo sapiens OX=9606 GN=KCNC1 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.382e-56 Identity = 142/455 (31.21%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R IFC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. UniProt/SwissProt
Match: sp|P15388|KCNC1_MOUSE (Potassium voltage-gated channel subfamily C member 1 OS=Mus musculus OX=10090 GN=Kcnc1 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.735e-56 Identity = 141/455 (30.99%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R +FC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. UniProt/SwissProt
Match: sp|P25122|KCNC1_RAT (Potassium voltage-gated channel subfamily C member 1 OS=Rattus norvegicus OX=10116 GN=Kcnc1 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.527e-56 Identity = 141/455 (30.99%), Postives = 223/455 (49.01%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---------------ESERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G +ES + INV G R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F S E E K ++ ++ IW + E P SS A + ++ + F + T + K EI+ RN T + Y + F+ I + V TF+ + R +FC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 446
BLAST of SMED30035396 vs. UniProt/SwissProt
Match: sp|P17972|KCNAW_DROME (Potassium voltage-gated channel protein Shaw OS=Drosophila melanogaster OX=7227 GN=Shaw PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 9.502e-56 Identity = 138/436 (31.65%), Postives = 220/436 (50.46%), Query Frame = -1 Query: 262 DSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFY---KKSESE------------RNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTS----------LPYVKADFIQIIYYITV---SILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLI----ASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSH--FINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTH 1461 DSE V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF VLN R G++H P +CGPLF E++ WG+ N+VE CC M T + L ++ K SE E + +I + IW + ++P SS+ A V + + F + T + ++ I RN+T L + + +YI + TF+++ R I N I S IID ++ + FY +L+ AS++E D+++ I ++R F++ R G ++L+ T + SA +L L++ F+++ +++F+S+++Y E P+ H F +IP WW +VT+TT GYGDM PKT +G V +C+L GVL IA VP++V+NF +YY+H Sbjct: 7 DSENRVV--LNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM-----RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENA------------DILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSH 422
BLAST of SMED30035396 vs. UniProt/SwissProt
Match: sp|G5EFC3|KCNAG_CAEEL (Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis elegans OX=6239 GN=egl-36 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.045e-53 Identity = 134/462 (29.00%), Postives = 237/462 (51.30%), Query Frame = -1 Query: 151 INVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSES----ERNSIKCVS--------------HFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVT--------SLPYVKADFIQIIYYITVSI---LTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYN-LIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEG--EVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKK 1434 +NV GVR + + T+K+IP + L L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ + E CC M L ++ + L ++ + E++++K + +W + ++P SS A + + + L + +F F + T S F + L I +N+T S+ V + + I I + T +LI R +FC + S +ID+++ + FY + ++ +E + DV++ L + + R F++ + ++G Q+L++T + SA +LIL++ F+++ +++F+++++Y E P++ F +IP WW I T+TT GYGDM P T G LV +C++ GVL IA VP++V+NF ++Y+H N ++L +R L V+QIR ++++ Sbjct: 41 LNVGGVRHETYQATLKKIPATRLSRLTPSLANFDPLLNEYFFDRHPAVFAMILNYYRTGKLHYPTDVCGPLFEEELQYWGLDASD-TEPCCWMQLLHAKDTQETLAVLDRMDADHEDDPQLREQDTMKKFGWEEDYFQGKRTRWMKLKPQMWSLFDEPYSSQAAKLIAGISVLFIFISIFSFCLKTHQS--FRLPVL-IGQNITMPGGVVQPSIERVSTEPLPIFGQIEMLCNIWFTLELIIRFVFCPSKIRFFKSPLNMIDLVATLSFYADAMMVRVVEDEP----------KDVVEFLSMIRIFRLFKLTQHHQGLQILIHTFRASAKELILLVFFLILGIVIFAALVYYAEKMEANPNNQFQSIPLGLWWAICTMTTVGYGDMTPHTSFGRLVGSLCAVMGVLTIALPVPVIVSNFAMFYSH----------NQARDKLPKRRRRVL-PVEQIRLQARR 477
BLAST of SMED30035396 vs. TrEMBL
Match: A0A267H4B4 (BTB domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014518g1 PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 8.701e-81 Identity = 176/517 (34.04%), Postives = 279/517 (53.97%), Query Frame = -1 Query: 163 SMKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESE-----------------RNSIKC-------VSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK-----------RNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTA-GTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE-----GEV----------------------PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAM--SSEQTITNYTYNQLEGHIKR-ALGKVKQIRK 1515 +M F++ S + D++ S++++NV G RF+V +T+ + + +L G++ + EYFFDRDP VF VL CR GE+H+P +CGPL RE+ WGI+ +++ CC+ +L ++ R+ +L+ FE FF ++ E+E NS K ++ R+ WK+L+ P+S A +Y+ +L + V+ +F FV ST + + EI+ + + +KAD++ + +LTFD + R + C N ++ + YT+ID+LS++PFY N + + + FS P + G + I L I+ +R RI R YRG QVL+YT+K S DL+LM VFV + L+FS++IF+ E GE DS F ++ FWW +VT+TT GYGD+VP+T G +V C+L G+LLIAFTVPILVN+F+LYY+H+ + S ++ Y L + A GKVK+++K Sbjct: 71 NMHFIDDGSLDELMADIEDADVLSLIRVNVGGRRFEVLKSTLMRQHFIYEKLLHDGVYRAGQEEYFFDRDPTVFNIVLWYCRYGELHVPHHLCGPLLERELALWGIQPAIEIQNCCVSHLMDTKSRLISLKQFENFFKEEMETEPVVPLDCIENDDFGGPTSNSSKGWQRVKAFLASLRRRCWKILDHPSSGFPATVYAVLLTITVLYAVFSFVASTSEQFQRLLTQREIQFYSNKHPSWYGNHTDAQTRIKADWLVFSDWFAFGVLTFDFLVRLLCCKNKLAYFKNAYTVIDLLSILPFYVNELLK-LTWGIIEFSEPNSFGVTEYIAFLKISLFVRLLRIGRHYRGLQVLIYTLKTSLRDLMLMGVFVALGTLLFSTLIFFCEKSRSGGETHLAPTAPPDKKKVDCSKCQKGDTDSKFNSMFDGFWWSLVTMTTVGYGDLVPQTSSGRIVGSACALSGLLLIAFTVPILVNHFMLYYSHSQIVHVSRNSVQEYATKALLAKVNSFAGGKVKKMKK 586
BLAST of SMED30035396 vs. TrEMBL
Match: A0A267H2F4 (BTB domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014518g2 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 3.277e-80 Identity = 175/517 (33.85%), Postives = 277/517 (53.58%), Query Frame = -1 Query: 163 SMKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESER-----------------------NSIKC-VSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK-----------RNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTA-GTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE-----GEV----------------------PDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAM--SSEQTITNYTYNQLEGHIKR-ALGKVKQIRK 1515 +M F++ S + D++ S++++NV G RF+V +T+ + + +L G++ + EYFFDRDP VF VL CR GE+H+P +CGPL RE+ WGI +V+ CC+ +L ++ R+ +L+ FE FF ++ E+E +K ++ R+ WK+L+ P+S A +Y+ +L + V+ +F FV ST + + EI+ + + +KAD++ + +LTFD + R + C N ++ + YT+ID+LS++PFY N + + + FS P + G + I L I+ +R RI R YRG QVL+YT+K S DL+LM VFV + L+FS++IF+ E GE DS F ++ FWW +VT+TT GYGD+VP+T G +V C+L G+LLIAFTVPILVN+F+LYY+H+ + S ++ Y L + A GKVK+++K Sbjct: 71 NMHFIDDGSLDELMADIEDADVLSLIRVNVGGRRFEVLKSTLMRQHFIYEKLLHDGVYRAGQEEYFFDRDPTVFNIVLWYCRYGELHVPHHLCGPLLERELALWGIHPAIEVQNCCVSHLMDTKSRLISLKQFENFFKEEMETEPVVPLDCGENDDFGGPTSSSSKGWQRVKAFLASLRRRCWKILDHPSSGFPATVYAVLLTITVLYAVFSFVASTSEQFQRLLTQREIQFYSNKHPSWYGNHTDAQTRIKADWLVFSDWFAFGVLTFDFLVRLLCCKNKLAYFKNAYTVIDLLSILPFYVNELLK-LTWGIIEFSEPNSFGVTEYIAFLKISLFVRLLRIGRHYRGLQVLVYTLKTSLRDLMLMGVFVALGTLLFSTLIFFCEKSRSGGETHLAPTAPPDKKKVDCSKCQKGDTDSKFNSMFDGFWWSLVTMTTVGYGDLVPQTSSGRIVGSACALSGLLLIAFTVPILVNHFMLYYSHSQIVHVSRNSVQEYATKALLAKVNSFAGGKVKKMKK 586
BLAST of SMED30035396 vs. TrEMBL
Match: A0A1I8F268 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 8.581e-80 Identity = 170/501 (33.93%), Postives = 263/501 (52.50%), Query Frame = -1 Query: 163 SVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESE------------------------RNSIK-CVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK-----------RNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEG----------------------------------EVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAM--SSEQTITNYTYNQLEGHIKR-ALGKVKQIRK 1446 +V++NV G RF+V +T+ + + +L G++ + EY+FDRDP +FK VL CR GE+H+P CGPL RE+ WG++ +++ CC+ +L ++ R+ +L+ FE FF ++ ESE R +K ++ R+ WK+L+ P+SS A +Y+ +L + V+ +F FV ST + + EI + + P +K D++ +I +LTFD R +FC N ++ + YTIID+LS++PFY N + + G + I L I +R RI R YRG QVL+YT++ S DL+LM VFV + L+FS++IF+ E + DS F ++ FWW +VT+TT GYGD+VP+T G +V C+L G+LLIAFTVPILVN+F+LYY+H+ + S+ ++ Y L + A GKVKQ+RK Sbjct: 245 GLVRMNVSGTRFEVLRSTLLKQRHIYDKLLHDGIYRAAQQEYYFDRDPAIFKIVLWYCRYGELHVPHHYCGPLLERELALWGVQSVIEIQNCCVSHLMDTKSRLVSLKKFENFFKEEMESEPLLLPEGVEFDDPLDLDPAKAHGWRRRVKDALAALRRRCWKILDHPSSSFPAAVYAVILSVTVLYTVFSFVASTSDRFQRPMSPGEIAFYSAKHPAWYGNHTNTNPQIKVDWLTFPDWIAFGVLTFDFFVRLLFCKNKLAYFKNNYTIIDMLSILPFYVNELLKFFFGIIEFSDSNNFGLAEYISFLKIALFMRLLRIGRHYRGLQVLIYTLRTSFRDLMLMGVFVALGTLLFSTLIFFCEKSRNEPSSGGGGGKGGTVDCSKCPGGGGGGNGGGRQGTDSRFTSMFDGFWWSLVTMTTVGYGDLVPQTNAGRIVGSACALSGLLLIAFTVPILVNHFMLYYSHSQIVHVSKSSVQEYATKALLAKVNSFAGGKVKQMRK 745
BLAST of SMED30035396 vs. TrEMBL
Match: A0A1I8I7R2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.189e-76 Identity = 162/482 (33.61%), Postives = 259/482 (53.73%), Query Frame = -1 Query: 163 SVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHF--------------------------RQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLP-----------YVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--------------GEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAM--SSEQTITNYTYNQLEGHIKR-ALGKVKQIRK 1446 ++++NV G RF+V +T+ + + ++ G++ + EY+FDRDP++F VL CR GE+H+P CGPL RE+ WGI+ +++ CC+ ++ ++ R+ +L+ FE FF ++ E+E I F R+ WK+L+ P+SS A +Y+ +L + V+ +F FV ST + E+ + P +K D++ +I +LTFD + R + C N ++ + YTIID+LS++PFY N + G + I + IT +R RI R YRG QVL+YT++ S DL+LM VFV + L+FS++IF+ E +VP + F+++ FWW +VT+TT GYGD+VP+T G +V C+L G+LLIAFTVPILVN+F+LYY+H+ + S ++ Y L + A GKVK++R+ Sbjct: 42 GLIRLNVSGTRFEVLRSTLLKQRYVYDKLMHDGIYRAPQQEYYFDRDPDIFTIVLWYCRYGELHVPHHYCGPLLERELALWGIQPAIEIQNCCVSHVMDTKSRLVSLKKFENFFKEEMENEPLIIPTDHEFEEQNLLQDLQKSHGWQKRLKEALIAMRRRCWKILDHPSSSFPAAVYAVLLSITVLYTVFSFVASTSEHFQRLMTPREVAFYSSKHPSWYGNHTDGRSRIKVDWLVFPDWIGFGVLTFDFLVRLLCCRNKLAYFRNNYTIIDLLSILPFYVNELLKVCFGIIEFSDSSNFGLPEYIAFVKITLFMRLLRIGRHYRGLQVLIYTLRTSFRDLMLMGVFVALGTLLFSTLIFFCEKARSEGHQVGADDCSKVPRTVFMSMFDGFWWSLVTMTTVGYGDLVPQTNAGRIVGSACALSGLLLIAFTVPILVNHFMLYYSHSQIVHVSRNSVQEYATKALLAKVNSFAGGKVKRMRQ 523
BLAST of SMED30035396 vs. TrEMBL
Match: Q86MY4 (Potassium channel Kv3.2 OS=Notoplana atomata OX=221862 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 1.214e-71 Identity = 152/448 (33.93%), Postives = 251/448 (56.03%), Query Frame = -1 Query: 160 SEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEK-GLHNKTKNE-YFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFR--QMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADF-------IQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA----AMSSEQTITNYTYNQLEGHIKRALGKVKQIRKK 1458 SE+ +V+INV G F TIK++P L G H E Y+FDRDPE+F+ VLN RLGE+H+P +CGP +E++ WG+ E +E CC ++ + +L +FE+FF + + +C +R +W L++P+SS A +Y ++ + V LFVF+ T + + N TS V + ++ + Y+ V+ TFD++ R + + S T+I+++++IP+Y + ++ +I + + DVI V I +LR F+ILR Y G QVL+YT++ S DL+LM+ F+ +A L FS++I++ + + F +IP SFWW I+T+TT GYGD P P G+LV C+L GVL++AFTVPILVN+F+L+Y+H+ ++ E+ ++ Y G++ + +K+++ K Sbjct: 49 SEDRQLVRINVGGSLFLTRQRTIKKMPNSRLGRLRTTGPHYLRDQEMYYFDRDPEIFRVVLNYHRLGELHLPLHVCGPSLEKELQYWGLP-EELIEKCCWVSYVQLKSQKYSLLDFERFFDDRMSPRKVGPRCPRCYRFLDAMWTFLDKPSSSKGAFLYGVIVAVFVFLSLFVFIAETHPAFQLPLNST----NETSTSDVGDHYERQPWPGLETLDYVCVAFFTFDILLRVCVTPQKVTFLISPMTVIEIIAVIPYYIDFVSHFIHAR---YGHKPNKYLDVIHVFRIFGILRVFKILRHYSGLQVLIYTLRTSLKDLLLMLTFIGIATLFFSTLIYFSDDR---TKFSSIPASFWWSIITMTTVGYGDFYPTRPWGYLVGSACALIGVLVVAFTVPILVNSFMLFYSHSQSILSVKREERLSRY---HGRGYVDQPPKILKELQLK 482
BLAST of SMED30035396 vs. Ensembl Cavefish
Match: kcnc2 (potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]) HSP 1 Score: 191.43 bits (485), Expect = 8.897e-54 Identity = 136/458 (29.69%), Postives = 222/458 (48.47%), Query Frame = -1 Query: 259 PYRRTGDSEES----SVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHN---------KTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFE--------------------KFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSL---PYVKADFIQIIYYIT---VSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1479 P + G +E S + +NV G R + + NT++ +PG +L L + + NEYFFDR P VF VLN R G++H P +CGPLF E+ WGI E VE CC M + L F+ + ++ +++ ++ ++W + E P SS A + +M + F + T + I K + RN + L P + + + Y+ V TF+ + R F + + S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 4 PGKVNGKAEPSKHGNERIILNVGGTRHETYRNTLRTLPGTRLALLATELPSSACAVTVRARANNEYFFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEEELSFWGID-ETDVEPCCWMTYRQHRDAEEALDVFDMNALGGGPEGPGGEDGDELGEAAEQREHADKERDTGWRRWQPVMWNLFEDPYSSRAARFVAFASLFFIMVSITTFCLETHEAFNTIINKTDALRNDSLLEVSPQYEIETDPALTYVEGVCVLWFTFEFLVRVTFSPDKLEFVKSVLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASVNEFFLLIIFLALGVLIFATMIYYAERIGANPNDPTASDHTMFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 451
BLAST of SMED30035396 vs. Ensembl Cavefish
Match: kcnc3a (potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]) HSP 1 Score: 190.66 bits (483), Expect = 3.999e-53 Identity = 133/443 (30.02%), Postives = 222/443 (50.11%), Query Frame = -1 Query: 259 ESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESE-------RNSIK--CVSH----------FRQMIWKVLEQPTSSSLA--LIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLE------IKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1452 +S + IN G+R + + +T+K +PG + L + ++ +E+FFDR P F +LN R G++H P +CGPLF E+ WGI E VE CC MN + L +FE + E + +K C+ ++ IW + E P SS A + + ++L++ + + F + T + K E + R S V ++ + + V T ++ R IFC + S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 34 DSEKIVINCGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKSDEFFFDRHPNTFAFILNYYRTGKLHCPSDVCGPLFEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPEVPEDDPALTGGADGDLKRLCLQEDGRKPSWWSIWQPRIWNLFEDPYSSKYARYVAFGSLLFILIS--ISTFCLETHEAFNTIYNKTENVTVGNVTREEVSFEVVTDSWLTYVEGMCVIWFTIEVFTRVIFCPDKAEFFKSSLNIIDFVAILPFYLEVALSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPEDPTASAHTAFKNIPIGFWWAVVTMTTLGYGDMYPETWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 464
BLAST of SMED30035396 vs. Ensembl Cavefish
Match: kcnc2 (potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]) HSP 1 Score: 189.504 bits (480), Expect = 4.546e-53 Identity = 132/438 (30.14%), Postives = 215/438 (49.09%), Query Frame = -1 Query: 259 INVRGVRFKVFWNTIKEIPGLSKTILEKGLHN--------KTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFE--------------------KFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSL---PYVKADFIQIIYYIT---VSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1434 +NV G R + + NT++ +PG +L L + + NEYFFDR P VF VLN R G++H P +CGPLF E+ WGI E VE CC M + L F+ + ++ +++ ++ ++W + E P SS A + +M + F + T + I K + RN + L P + + + Y+ V TF+ + R F + + S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 9 LNVGGTRHETYRNTLRTLPGTRLALLATELPSSACQQVRARANNEYFFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEEELSFWGID-ETDVEPCCWMTYRQHRDAEEALDVFDMNALGGGPEGPGGEDGDELGEAAEQREHADKERDTGWRRWQPVMWNLFEDPYSSRAARFVAFASLFFIMVSITTFCLETHEAFNTIINKTDALRNDSLLEVSPQYEIETDPALTYVEGVCVLWFTFEFLVRVTFSPDKLEFVKSVLNIIDFVAILPFYLEVGLSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASVNEFFLLIIFLALGVLIFATMIYYAERIGANPNDPTASDHTMFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 436
BLAST of SMED30035396 vs. Ensembl Cavefish
Match: kcnc1a (potassium voltage-gated channel subfamily C member 1 [Source:NCBI gene;Acc:103038026]) HSP 1 Score: 189.889 bits (481), Expect = 4.757e-53 Identity = 152/544 (27.94%), Postives = 245/544 (45.04%), Query Frame = -1 Query: 13 SEESSVVKINVRGVRFKVFWNTIKEIPGLSKTIL-EKGLH-----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNF-----------------------------EKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIK--RNVTSLPYVKAD---FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYR------GFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVT------VFTIMEESESVKGNTNYAT-HRQNCATIDN 1458 +E V INV G+R + + +T++ +PG L E H + +E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F K + + +++ +W + E P SS A + ++ + F + T + I + +I N T + Y + + F+ I + V TF+ + R FC + + I + IID ++++PFY + S + ++ + VLG V+RF RILR ++ G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A + HI RA Q+ + G N H ++ S+ V + V G A ++C ID Sbjct: 4 GDEKDRVVINVGGIRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDAQIDEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHREAEEALDSFGGGPAELGNDDTDADGLGDPGDGDEELEMTKRLALGDAPDGKAGGLWQRWQRRVWALFEDPYSSKYARWVAFASLFFILVSITTFCLETHEAFNPIINRTDIDPVDNSTRI-YQETETEVFLTYIEGVCVVWFTFEFLMRVTFCPDKKKFIKNTLNIIDFVAILPFYLEVGLSGLSSK------------EAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAKPNDPRASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRA----PQLGSPNFCKSGMNSPHHSTQSDTCPLAAQDEVLEMNRADPKVNGEAAKAALANEDCPHIDQ 523
BLAST of SMED30035396 vs. Ensembl Cavefish
Match: kcnc3a (potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]) HSP 1 Score: 190.66 bits (483), Expect = 4.950e-53 Identity = 133/443 (30.02%), Postives = 222/443 (50.11%), Query Frame = -1 Query: 259 ESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESE-------RNSIK--CVSH----------FRQMIWKVLEQPTSSSLA--LIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLE------IKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1452 +S + IN G+R + + +T+K +PG + L + ++ +E+FFDR P F +LN R G++H P +CGPLF E+ WGI E VE CC MN + L +FE + E + +K C+ ++ IW + E P SS A + + ++L++ + + F + T + K E + R S V ++ + + V T ++ R IFC + S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 34 DSEKIVINCGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKSDEFFFDRHPNTFAFILNYYRTGKLHCPSDVCGPLFEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPEVPEDDPALTGGADGDLKRLCLQEDGRKPSWWSIWQPRIWNLFEDPYSSKYARYVAFGSLLFILIS--ISTFCLETHEAFNTIYNKTENVTVGNVTREEVSFEVVTDSWLTYVEGMCVIWFTIEVFTRVIFCPDKAEFFKSSLNIIDFVAILPFYLEVALSGLSSKA---------AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPEDPTASAHTAFKNIPIGFWWAVVTMTTLGYGDMYPETWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 464
BLAST of SMED30035396 vs. Ensembl Sea Lamprey
Match: kcnc1a (potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]) HSP 1 Score: 204.527 bits (519), Expect = 9.415e-59 Identity = 136/441 (30.84%), Postives = 225/441 (51.02%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFE------------------KFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLE---IKRNVTSLPYVKADFIQIIYYIT---VSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G S+E+ V INV G R + + T++ +PG + L + ++ NE+FFDR P VF +LN R G++H P +CGPLF E+ WGI E VE CC MN + L +FE +F + + + + ++ +W + E P SS A I + L ++ + F + T + + K E I T YV + ++ Y+ V+ +F+ + R I C + + I + +ID ++++PFY + S + ++ P ++V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++IFY E G P+ + F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 30 GRSDENERVVINVGGTRHETYRGTLRTLPGTRLSWLTEPDAFANFDYDAKGNEFFFDRHPTVFAHILNYYRTGKLHCPSEVCGPLFEEELIFWGID-ETDVEPCCWMNYRQHRDAEEALVSFENPDINGNDEVNEDGEVSKRFGLDERSPDGGKLGFLRRWQPRMWALFEDPYSSRAARIVALASLLFILISITTFCLETHEAFNTVLNKTENYTINNVTTQKVYVDVETDPVLMYVEGVCVAWFSFEFLVRIICCPDKKVFIKNYLNVIDFVAILPFYLEVGLSSLTSK------PARDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIFYAERFGANPNDPTASDHTSFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFSMYYSLA 463
BLAST of SMED30035396 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004235.1 (pep scaffold:Pmarinus_7.0:GL476413:398954:411573:-1 gene:ENSPMAG00000003870.1 transcript:ENSPMAT00000004235.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 181.03 bits (458), Expect = 8.066e-52 Identity = 119/406 (29.31%), Postives = 209/406 (51.48%), Query Frame = -1 Query: 268 VKINVRGVRFKVFWNTIKEIPG-----LSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTV----NSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYY 1440 V++NV G+ +V W T++ +P L T L ++ NEYFFDR P F VLN R G +H+ +C F +E+ WG+ E +E CC ++ E ++ E + C + R+ +W++LE P SS A +A++ LF+ V+ST+ N++P K E + + + + + I ++ T + + R + N +ID+++++P+Y + + E+ + F V+++ I +LR ++ R G Q L +T++ S N+L L+++F+ + +++FSS++F+ E + PD+ F +IP SFWW +T+TT GYGD+ P T LG ++ G+C + GVL+IA +PI+VNNF +Y Sbjct: 2 VRLNVGGLVHEVLWRTLERLPRTRLGRLHATNTHGALSELCDDYSIADNEYFFDRHPGAFASVLNFYRTGRLHMSEEMCALSFGQELDYWGVD-EIYLETCCQARYHQKKEQMSEELRREAESAREREGDEFEGTCCADKRRKLWELLENPNSSL------AAKGMAIVSILFI-VLSTIALSLNTLPDLQHKDEFSHIIDNPKLAQVEAVCIAWF------TMEYLLRFMSAPNKWKFFKGALNVIDLMAILPYYITIFLT--ESSRGVSQFQN--VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEPDTKFHSIPASFWWATITMTTVGYGDIYPMTLLGKIIGGLCCIAGVLVIALPIPIIVNNFSEFY 389
BLAST of SMED30035396 vs. Ensembl Sea Lamprey
Match: kcnf1b (potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]) HSP 1 Score: 143.665 bits (361), Expect = 4.066e-38 Identity = 108/402 (26.87%), Postives = 192/402 (47.76%), Query Frame = -1 Query: 268 VKINVRGVRFKVFWNTIKEIPG--LSKTILEKGLHNK--------TKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKC-VSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYY 1440 + +NV G R + + +P L+ ++ G + E+FFDRDP F +L+ GE+H+ + C F +E+ WG+ + ++ CC + + + + + S + + + R +W+++E+P SS LA LA+ F F+ VVS+V TI +L+ + I I + + T + R + + S ++D+L+++P++ L + + + A ++ L I V R F++ R G Q L Y +K S +L L+++++ V + +FS++ + VE P++ F +IP SFWW I+T+TT GYGD+ PKT LG + A + LCG L IA + ++NNFV +Y Sbjct: 2 LAVNVGGSRHVLRSELLARLPDSLLATLLVRPGAARRPAYDDFDPDSGEFFFDRDPRAFDRILDAYHFGEVHMDRSACPMCFKQEMDFWGVGADC-LDDCCRFRYSELQEELDEIVQMVETELRDSGTAGAAQRGRCERARVGVWQLMEKPDSSRLAR------SLALTSFAFI-VVSSVVMCLGTIPELQPGPGADGAAGEEHPTIAAIETVCIGWFTVEFALRFFSAPDRVKFMSSPMNVVDLLAVLPYFVVLALTEMGGSVMGL----ASMQQGVQALRIMRVARVFKLARHSSGLQTLTYALKSSFKELGLLLLYLGVGVYLFSALGYTVEQSHPETLFSSIPHSFWWAIITMTTVGYGDIYPKTELGKINAAVSFLCG-LAIALPIHPIINNFVKFY 390
BLAST of SMED30035396 vs. Ensembl Sea Lamprey
Match: KCNA3 (potassium voltage-gated channel subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:6221]) HSP 1 Score: 144.821 bits (364), Expect = 7.246e-38 Identity = 128/500 (25.60%), Postives = 236/500 (47.20%), Query Frame = -1 Query: 31 NRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLH--NKTKNEYFFDRDPEVFKCVLNLCRLG-EMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSV--PFTIQKLEIKRNVTSLPY--VKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYN---QLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIMEESESVKGNTNYATHRQN 1500 RY +P G + V INV G+RF+ T+ + P +K + + +NEYFFDR+ F +L + G + P ++ +F E++ + + E +M+R + + K E E+ + + F++ +W + E P SSS A + V L ++ + +F + T+ + K+ N T Y V AD I+ I + +F+L+ R C + + IID+++++P++ L E QT + + +++V+ + V R F++ R +G Q+L +T+ S +L L++ F+ + +++FSS +F+ E + + F +IP +FWW +VT+TT GYGDM PKT G +V +C++ GVL ++ VP++V+NF +Y +QT+ ++ ++ H A + R+ C + E+ + + E E N N AT +Q+ Sbjct: 24 ERYELARP----GGHDFCERVVINVSGLRFETQLRTLAQFPDTLLGDPQKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVSVPYDIFTEEVRFYDLGEE-------------TMLRYREDEGYVK------EPEKPLPE--NEFQRQVWLLFEYPESSSPARAIAIVSVLVILISIIIFCLETLPEFRDDADLYKVSYYTNGTHYFYHNVFADPFFIMETICIIWFSFELMVRFCACPSKVEFGKNLMNIIDIVAIVPYFITLGTEMAE-QTGSANGQQTMSLAILRVIRLVRVFRIFKLSRHSKGLQILGHTLHASMRELGLLIFFLFIGVILFSSAVFFAEVDSKKTEFQSIPDAFWWSLVTMTTVGYGDMSPKTVGGKIVGSLCAIAGVLTVSLPVPVIVSNFNYFYQRETEGEDQTVYSHVHSTPFHEATHADNAEANSELCRRSICSFSSFEKIDCKEADEHADEDSCV-EGELKLSNCNVATAQQH 496
BLAST of SMED30035396 vs. Ensembl Sea Lamprey
Match: KCNA3 (potassium voltage-gated channel subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:6221]) HSP 1 Score: 135.961 bits (341), Expect = 6.122e-35 Identity = 114/417 (27.34%), Postives = 202/417 (48.44%), Query Frame = -1 Query: 220 INVRGVRFKVFWNTIKEIPG--LSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLG-EMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQK----LEIKR-NVTSLPYVKADFIQIIYYITVSI----LTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTY 1434 INV G+RF+ ++ + P L + +NEYFFDR+ F +L + G + P + +F+ EIK + + E +F ++ F K+ E S F++ +W + E P SS+ A + V L ++ + +F + T+ F +K L K N T + + ++I +I +F+L+ R C + S IID+++++P++ L + Q S A + +++V+ + V R F++ R +G Q+L T+K S +L L++ F+ + +++FSS +++ E + +S F +IP +FWW +VT+TT GYGDM P T G +V +C++ GVL IA VP++V+NF +Y + E NY + Sbjct: 32 INVSGLRFETQLKSLDQFPDTLLGNPSKRSRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVSIDVFSEEIKFYELGNEAMAKF-----------------QEDEGFIKEEEKPLPS----DEFQRQVWLLFEYPESSNPARGIAIVSVLVILISIIIFCLETLPE--FRDEKEQKFLPAKDINGTQVKIMHGSSFTDPFFIVETICIIWFSFELLVRFFACPSKPGFFKSIMNIIDIVAILPYFITLGTEMAKHQG---SGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADHQNSEFRSIPDAFWWAVVTMTTVGYGDMRPVTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDNEEH--ANYLH 420
BLAST of SMED30035396 vs. Ensembl Nematostella
Match: EDO39804 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8W8]) HSP 1 Score: 201.06 bits (510), Expect = 4.573e-59 Identity = 142/435 (32.64%), Postives = 224/435 (51.49%), Query Frame = -1 Query: 259 YSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLS-KTILEKGLH----NKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESER-------------NSIK-----CVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1494 +S L+ GD V INV G + + + T+K IP I E G + +E+FFDR P VF VLN R G++H P +CGPLF E+ WGI E +VE CC +N NL F+ + S++E +SI+ ++ IW + E+P SS A + + + ++ + +F + TV + TS +V + I+ + V+ T + + R IFC + S ID+ +++PFY LI +T++ V++V+ + V R F++ R G Q+L +T++ S ++L L++ F+ + +++FSSVIFY E + +HF IP +FWW +VT+TT GYGDMVP T G +V +C++CGVL+IA VP++V+NF LYY+HA Sbjct: 5 HSVLEEQTNAGDR-----VVINVGGQKHETYIGTLKNIPDTRLYWITENGTQLPEFDPNTSEFFFDRHPGVFAQVLNFYRTGKLHCPNDVCGPLFEDELAFWGID-ELQVEPCCWLNYKQHREAQANLDPFD---HHDSDNESVGDMDMSVYGLVADSIRQRNRTWWKKYQPRIWTMFEEPYSSIPAQVLAFITMFLIISSVCLFCLETVP---------KFDNPKTSEGFV----LYILEAVCVAWFTLEFLFRLIFCPDKLSFFKKPMNWIDLGAILPFYLTLIVRESNFKTIV----------VLRVVRLIRVFRIFKLSRHSYGLQILGHTLRSSCSELFLLVFFLTIGVVIFSSVIFYAEKDTKGTHFTTIPHTFWWAVVTMTTLGYGDMVPITWQGQIVGSLCAVCGVLMIALPVPVIVSNFSLYYSHA 407
BLAST of SMED30035396 vs. Ensembl Nematostella
Match: EDO42724 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0S6]) HSP 1 Score: 197.593 bits (501), Expect = 6.314e-58 Identity = 131/418 (31.34%), Postives = 217/418 (51.91%), Query Frame = -1 Query: 259 VKINVRGVRFKVFWNTIKEIPG-----LSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKK------------------SESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTN-DVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1440 V INV GVR + + +T+K IP +++ + + EYFFDR P VF VLN R G++H P +CGPLF E+ WGI + +VE CC + + L FE ++ +ESE + ++ IW ++E+P SS+LA + + ++ + +F + ++ S Y+K D + I+ I V T +L+ R +FC ID L+++PFY +L F + D + ++ + + R F++ R G Q+L +T++ S +L+L++ F+++ +++F+S+IFY E ++P + F++IP SFWW +VT+TT GYGDM P++P G + +C++CGVL IA VP++VNNF LYY+HA Sbjct: 3 VSINVGGVRHETYKSTLKNIPDTRLSWIAEASAGAADFDPSTGEYFFDRHPGVFANVLNYYRTGKLHCPLDVCGPLFEDELGFWGID-DQQVESCCWLTYRQHRDAQETLAAFEGVEFENEYEDDEEPDLGRYGFNFAAESEPDKT-WWERYQPRIWTLMEEPHSSTLAKVIAYTTLTLILVSVGIFCLESMEKF--------------SEKYLK-DLLVILEGICVVWFTLELMVRFVFCPAKCEFFKKIMNWIDFLAIVPFYVSL------------GFNNNNNDIDALMIIRLIRIFRIFKLSRHSSGLQILGHTLRASFRELLLLIFFLLIGVVLFASLIFYCEKKIPGTKFVDIPSSFWWAVVTMTTVGYGDMAPQSPSGKFIGSLCAVCGVLTIALPVPVIVNNFSLYYSHA 391
BLAST of SMED30035396 vs. Ensembl Nematostella
Match: EDO38237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDJ4]) HSP 1 Score: 196.823 bits (499), Expect = 1.273e-57 Identity = 130/414 (31.40%), Postives = 223/414 (53.86%), Query Frame = -1 Query: 259 ESSVVKINVRGVRFKVFWNTIKEIPG--LSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESER-----------NSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHIC-SCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEG--EVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1452 +SS + INV G R + +T++ IP LS ++ K EYFFDR P F VLN R G++H P +CGP+F E+ WGI E ++E CC T +NL+ F + + E N + C + +W+ L++P SS +A I+S L + + F +T+ + I+K I + L +++ F I + +F+L R I C + + H C ID +++IPFY N+ +P N ++++ + ++R FR ++ G Q+++ T+K S+++L+L+++ V++ +++FSS+++YVE E + F ++P+SFWWC++T+TT GYGDM P+T G ++ G C++CGVL++A + ++ +NF LYY HA Sbjct: 14 DSSRIIINVGGFRHETSVSTLQNIPDTRLSWIAENSTVNEDNKREYFFDRHPTAFCQVLNFYRTGKLHCPTEMCGPMFEEELIFWGID-EKQMEPCCWGTYTQHREAEENLKAFVGPGFNDLKDEPAENHMGSYGSINELNCWKRIQPQLWETLDEPHSSKMAKIFSYTSCLFIALSIATFCATTMPA----IRKNNIMGSREGLDHIEM-FCSIFF-------SFELFMRLISCPS-KLHFCRGIMNWIDFVAIIPFYVNIF------------YP----NPIVRMFLVIRIMRLFRFIKLSYGLQIMIQTLKASSHELVLLLLMVLIPMVMFSSIVYYVEVIIEGRGAQFTSVPESFWWCLITMTTVGYGDMTPQTWPGKIIGGACAICGVLIVALPISVIGSNFNLYYAHA 397
BLAST of SMED30035396 vs. Ensembl Nematostella
Match: EDO47871 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL57]) HSP 1 Score: 188.348 bits (477), Expect = 3.788e-54 Identity = 124/424 (29.25%), Postives = 215/424 (50.71%), Query Frame = -1 Query: 244 VKINVRGVRFKVFWNTIKEIP-------------GLSKTILEKGLHNKTKN-EYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFF-----YKKSESERN------SIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSE 1440 ++N+ GVRF++ W++IKE P G + L G+ K E FF RDPE+FK ++ R G+ H P TIC F RE+K WGI ++N + CC + ++NL ++ F KK + E + S ++ ++ +W + E P SS +A I + VM ++T++S+ + E N L ++A ++ T + + R + + + S ID+L+++P+Y+ L++ + Q + ++++L I ++R F++ R G Q L YT K S +L L+ +++ + +FSS++++ E P+S F +IP++FWW I+T+TT GYGD+ P TPLG LV +C + G++ IA +P +V+NF +Y S E Sbjct: 15 AQLNISGVRFELLWSSIKEFPFTRLGKVYFWYEHGDNWQELCDGVKMGEKTAEVFFQRDPEIFKTIMCYYRNGKFHFPRTICIEHFQRELKYWGISIKNMGD-CCYNHFHQENEAVENLMKIKEAFKKDLNMKKEQDEVDLLLEVESRSKLARLKRKMWDLFENPHSSFMAKIVYLLSSFFVMLSTVALCLNTIDSLRIKLDNGETADNAV-LAGIEAG--------CIAWFTVEYLIRLLSAPRIVPFLKSIMNTIDLLAILPYYFELLSLAFDNQ---LDYRFVEMRRILQILRILRIVRIFKMARHSVGLQTLAYTFKQSTAELGLLGTLLIMGMTLFSSLVYFAEEAEPNSMFKSIPEAFWWSIITMTTVGYGDVYPVTPLGKLVGSLCCISGIIFIALPIPTIVSNFSQFYKDQRKSVE 425
BLAST of SMED30035396 vs. Ensembl Nematostella
Match: EDO40233 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7P7]) HSP 1 Score: 188.348 bits (477), Expect = 5.393e-54 Identity = 133/417 (31.89%), Postives = 210/417 (50.36%), Query Frame = -1 Query: 259 INVRGVRFKVFWNTIKEIPG-----LSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS---ESERNSIKCVSHFRQ-----------------MIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1434 INV G R++ F +T+ IP ++ E ++ + NEYFFDR +F+ +LN R G++H P +C +F E+ WGI E ++E CC T I++LR F +S E+ N+ CV R+ +IW+ LE+P SS A I + + ++ + FV+S+V VP+ S P +I Y+ S TF+ I RT F +LR T +D+ +L+PFY F G + IK+ + +LR FR+ R Q++ +K S ++L L+++ ++++++ FS+++FY +G+ S F NIPKSFWW I+T+TT GYGD P + G +V C+L GVL+I + I+ +NF LYY HA Sbjct: 21 INVGGRRYETFQSTLASIPDTRLAWIAGRPHETPEYDTSHNEYFFDRHSAIFEDILNYYRTGKLHCPRGVCSAVFEEELSFWGID-EEQMEPCCWPEYTRQRTAIEDLRIFNGNASDESLNSENTLNNADCVLPGRKASEDRKGLRGFYRLVQPIIWRTLEEPFSSCTAKITAIISLAFILLSVLDFVMSSVPVVPYQ-----------STP-------SVIEYVCGSWFTFEFILRTAFSPSLRRQFKKPMTWVDIGALLPFYLQF-------------FIDVGDMERIKIFIMFRLLRVFRLFRFSYRLQIMALALKGSLHELGLLLLILVISVIFFSTLVFYTDGDNKRSKFQNIPKSFWWAIITLTTVGYGDDTPVSWSGRIVGSACALWGVLMITLPISIVNSNFSLYYAHA 405
BLAST of SMED30035396 vs. Ensembl Medaka
Match: ENSORLT00000045623.1 (potassium voltage-gated channel subfamily C member 1-like [Source:NCBI gene;Acc:101168545]) HSP 1 Score: 193.741 bits (491), Expect = 3.378e-54 Identity = 134/448 (29.91%), Postives = 220/448 (49.11%), Query Frame = -1 Query: 259 TGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSH-------------------FRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPY---------VKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTL--LFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1467 T + +S + IN G+R + + +T+K +PG + L + ++ +E+FFDR P F +LN R G++H P +CGPLF E+ WGI E VE CC MN + L +FE E + C ++ +W + E P SS A + ++ + F + T + K E NVT + V ++ + + V T +++AR IFC + S IID ++++PFY + S + ++T + SF ++V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 TCSASDSEKIVINCGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKSDEFFFDRHPATFAFILNYYRTGKLHCPSDVCGPLFEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPDAPEDDPALTGCADGDLKRLCMQEDGRRATRWQVWQPWMWALFEDPYSSKYARYVAFASLFFILLSISTFCLETHEAFNTIYNKTE---NVTVGNFTHEEIVYEVVTDGWLTYVEGVCVIWFTIEVMARVIFCPDKAEFFRSALNIIDFVAIVPFYLEVALSGLSSKTAKDILSF--------LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPNDPTAAAHTTFKNIPIGFWWAVVTMTTLGYGDMYPETWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 437
BLAST of SMED30035396 vs. Ensembl Medaka
Match: ENSORLT00000007744.2 (potassium voltage-gated channel subfamily C member 4 [Source:NCBI gene;Acc:101165306]) HSP 1 Score: 192.2 bits (487), Expect = 7.002e-54 Identity = 132/435 (30.34%), Postives = 220/435 (50.57%), Query Frame = -1 Query: 259 SEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKG---------LHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFE------------KFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYIT---VSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTN--DVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1458 E+S + INV G R + + +T++ +PG L + + E+F+DR P +F VLN R G++H P +CGPLF E+ WGI E VE CC M+ L FE + F + S+R S C ++ +W + + P SS A + V ++ + F + T ++ + K+ N + + +I++ + V T + + R I C N I + IID ++++PFY + + ++ A N ++V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ +HF NIP SFWW +VT+TT GYGDM P+T LG +V +C+L GVL IA VP++VNNF +YY+ A Sbjct: 32 GEDSDKIVINVGGTRHETYKSTLRTLPGTRLAWLAEPDAQVSTDSVAEPPSAAEFFYDRHPGIFAYVLNYYRTGKLHCPADVCGPLFEEELAFWGID-ETDVEPCCWMSYRQHRDAEAALEIFEPPDPDDTDDEAPRRFGIEDCSDR-SRSCCEVWQPKLWALFDDPYSSRAARGVAFVSLFFILLSITTFCLETHDAFNEWMDKVFQGNNTSGKSKAELGGSKILHGVEGVCVFWFTLEFLVRIICCPNKCFFIKNTLNIIDFVAILPFYLEMCLEGLSSK--------AAKNVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASVNEFLLLVIFLALGVLIFATMIYYAERIGASPNDPTGFNHTHFKNIPISFWWAVVTMTTLGYGDMYPQTWLGMMVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 456
BLAST of SMED30035396 vs. Ensembl Medaka
Match: kcnc1b (potassium voltage-gated channel subfamily C member 1 [Source:NCBI gene;Acc:101165633]) HSP 1 Score: 191.815 bits (486), Expect = 9.852e-54 Identity = 134/463 (28.94%), Postives = 222/463 (47.95%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFE---------------------------KFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVK----------------ADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G S++ + INV G+R + + +T++ +PG + L + ++ E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F + + + S S +++ +W + E P SS A ++A+ F+ V T F ++ E + + YV+ A ++ I + V TF+ + R FC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM PKT G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GLSDDKDRIVINVGGIRHQTYRSTLRTLPGTRLSWLAEPDAPNHFDYDAKIEEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHREAEEALDSFGGGGLLDLGSDDPDPEPEHTEDEVDEMTRRLAQGDSPDARSGSLWSRWQKRVWALFEDPYSSKYAR------WIALASLFFILVSITT----FCLETHEAFNPIVNRTYVEHLDNITTENTYQETETAAYLTYIEGVCVVWFTFEFLMRITFCPNKFDFIRNALNIIDFVAILPFYLEVGLSGLSSK---------AAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGANPNDPRASDHTQFKNIPIGFWWAVVTMTTLGYGDMYPKTTFGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 444
BLAST of SMED30035396 vs. Ensembl Medaka
Match: kcnc1b (potassium voltage-gated channel subfamily C member 1 [Source:NCBI gene;Acc:101165633]) HSP 1 Score: 192.2 bits (487), Expect = 1.104e-53 Identity = 134/463 (28.94%), Postives = 222/463 (47.95%), Query Frame = -1 Query: 259 GDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFE---------------------------KFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVK----------------ADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1464 G S++ + INV G+R + + +T++ +PG + L + ++ E+FFDR P VF +LN R G++H P +CGPL+ E+ WGI E VE CC M + L +F + + + S S +++ +W + E P SS A ++A+ F+ V T F ++ E + + YV+ A ++ I + V TF+ + R FC N I + IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G P+ + F NIP FWW +VT+TT GYGDM PKT G LV +C+L GVL IA VP++VNNF +YY+ A Sbjct: 2 GLSDDKDRIVINVGGIRHQTYRSTLRTLPGTRLSWLAEPDAPNHFDYDAKIEEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGID-ETDVEPCCWMTYRQHREAEEALDSFGGGGLLDLGSDDPDPEPEHTEDEVDEMTRRLAQGDSPDARSGSLWSRWQKRVWALFEDPYSSKYAR------WIALASLFFILVSITT----FCLETHEAFNPIVNRTYVEHLDNITTENTYQETETAAYLTYIEGVCVVWFTFEFLMRITFCPNKFDFIRNALNIIDFVAILPFYLEVGLSGLSSK---------AAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGANPNDPRASDHTQFKNIPIGFWWAVVTMTTLGYGDMYPKTTFGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLA 444
BLAST of SMED30035396 vs. Ensembl Medaka
Match: ENSORLT00000008692.2 (potassium voltage-gated channel subfamily C member 1 [Source:NCBI gene;Acc:101159863]) HSP 1 Score: 190.274 bits (482), Expect = 2.345e-53 Identity = 144/500 (28.80%), Postives = 231/500 (46.20%), Query Frame = -1 Query: 139 ESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGL------HNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKS------------------ESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFV------FVVSTVNSVPFTIQKLE------IKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVI---KVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE--GEVPD-------SHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYT--------------HAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGA 1452 ES + IN GVR + + +T+K +PG + L + ++ +E+FFDR P VF +LN R G++H P +CGPLF E+ WGI E VE CC MN + L +FE + + ++ IW + E P SS A Y+A M F+ F + T + K E + R V ++ + + V T +++ R FC + S IID ++++PFY + S + ++ DV+ +V+ +LR F++ R + G +VL +T++ S N+ +L+++F+ + +L+F+++I+Y E G PD ++F NIP FWW +VT+TT GYGDM P+T G LV +C+L GVL IA VP++VNNF +YY+ H + + NY L G A ++ +I + SK+ A Sbjct: 6 ESEKIVINCGGVRHETYRSTLKTLPGTRLSWLTEPDAFSNFDYDPKLDEFFFDRHPSVFSFILNYYRTGKLHCPNDVCGPLFEEELAFWGID-ETDVEACCWMNYRQHRDAEEALDSFETPEPDAPDDDPALGGADGDLKRLCMQEDARRAGWWKTWQPRIWALFEDPYSSKYAR------YVAFMSLFFILISISTFCMETHEAFNTIYNKTENVTIGNVTREEIVYEVVTDSWLTYVEGVCVIWFTIEVLLRVTFCPDKLEFFKSALNIIDFVAILPFYLEVGLSGLSSK---------AAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPDDPTASAHTNFKNIPIGFWWAVVTMTTLGYGDMYPETWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNKHIPRAPQPGSPNYC---LGGDCPLAQEEIIEINRDSKQNGDA 486
BLAST of SMED30035396 vs. Planmine SMEST
Match: SMESG000003693.1 (SMESG000003693.1) HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = -1 Query: 7 MGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIMEESESVKGNTNYATHRQNCATIDNFQ 969 MGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLILMMVFVMVALLVFSSVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIMEESESVKGNTNYATHRQNCATIDNFQ Sbjct: 1 MGFLFVFVVSTVNSVPFTIQKLEIKRNVTSLPYVKADFIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLILMMVFVMVALLVFSSVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKSKKTKGANHRHCNSSSENVTVFTIMEESESVKGNTNYATHRQNCATIDNFQ 321
BLAST of SMED30035396 vs. Planmine SMEST
Match: SMESG000025883.1 (SMESG000025883.1) HSP 1 Score: 434.876 bits (1117), Expect = 8.246e-148 Identity = 233/513 (45.42%), Postives = 336/513 (65.50%), Query Frame = -1 Query: 19 KPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVN----SVPFTIQKLEIKR--------------NVTSLPYVKADFIQI--IYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSEQTITNYTYNQLEGHIKRALGKVKQIRKKS----KKTKGANHRHCNSSSENVTVFTIME-ESESVKGNTNYATHRQNCATI 1482 + Y++ ++ S V +NVRG RF++ W+T+K++P L I +G++ K+ EYFFDRDP+VFKC+LN CRLGE+H+P TICGP+F +E+ WGI + +E+CCLM + NS+MR++NLR F+ F + + FR +W +L+QPTSSS ALIY+ +LYL V+G LFVF+ +V+ S PFT IK N T + K IQ+ I+ T S LTFD++AR IF S I + YTIID+LSLIPFYYNLI + ++ + + +ND+I++L ++ LR FRILR YRG QVLLYT+KVS+ DL+LMM+F+ +A ++FS+++FYVE + + F NIP++FWWCIVTITTTGYGDMVP T +G+L+AG+C+LCGVL+IAFTVPILVNNF+LYYTHA+ + + + Y Q+E H+K A+ +VK+++ + KK N N+ EN +T+ ++ S+ G +H +C T+ Sbjct: 6 EKYQQKDLTDPDSTVIVNVRGKRFELLWSTLKKLPDLENAIRIRGIYRKSLQEYFFDRDPDVFKCLLNYCRLGELHVPSTICGPIFTKELHAWGIMKVDNIEYCCLMGINNSLMRLENLRKFDNMFPESNTEIGTDYDKFVRFRLFVWNILDQPTSSSFALIYAIILYLTVLGSLFVFITDSVDHPTFSTPFTDVDYSIKYGWTSQQLSEILSWPNATKILNEKKRTIQMNAIFIATNSFLTFDMVARMIFTTKFCSFIMNPYTIIDILSLIPFYYNLIDTVSHSKRSINVAFFSQSNDLIRLLSLSIGLRCFRILRHYRGLQVLLYTIKVSSFDLLLMMIFISLATIIFSTLMFYVENKT-NPKFTNIPRAFWWCIVTITTTGYGDMVPITGVGYLIAGLCALCGVLVIAFTVPILVNNFILYYTHASQNRKSGLYEYARKQIEEHLKEAVFQVKKLKDITTSYPKKFLKINDGFSNAQDENACSYTLERFDASSISG----GSHSFDCGTL 513
BLAST of SMED30035396 vs. Planmine SMEST
Match: SMESG000003694.1 (SMESG000003694.1) HSP 1 Score: 355.14 bits (910), Expect = 1.343e-119 Identity = 171/199 (85.93%), Postives = 177/199 (88.94%), Query Frame = -1 Query: 916 MKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVNSVPFT 1512 MKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTS V A + + FV + ++ +T Sbjct: 1 MKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSKIPITQIGVVADKAKLPYSFVAIDKFYDAAGYT 199
BLAST of SMED30035396 vs. Planmine SMEST
Match: SMESG000069015.1 (SMESG000069015.1) HSP 1 Score: 244.973 bits (624), Expect = 1.161e-73 Identity = 149/409 (36.43%), Postives = 239/409 (58.44%), Query Frame = -1 Query: 259 EESSVVKINVRGVRFKVFWNTIKEIP--GLSKTILEKGLHNKTKNEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTNSMMRIKNLRNFEKFFYKKSESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVST---VNSVPFTIQKLEIKRNVTSLPYVKAD-----FIQIIYYITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVEGEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHA 1455 ++ V+INV G F+ +T+ +IP L++ + + EYFFDRDPE+FK VLN R+GE+H+P ICGPL +E++ WG+ E +E CC ++ + +L +FE FF + + ++ C + + +WK +P+SS LA+IY+ ++ + V+ +F F+ + S T K+E+ + + + Q I + V + DL R + N + + T+I+++S+IP+Y ++ YIE ++ +G V+ VL I VLR +ILR Y G QVL+YT++ S DL+LM+ F+ VA L FS++I++V+ + + F +IP FWW I+T+TT GYGD+ PK G++V CSL GVL++AFTVPILVN+F+LYY+HA Sbjct: 68 DDIRTVRINVGGTIFETLESTLHKIPESKLAQLNVHSVYYRSQLKEYFFDRDPEIFKVVLNYHRIGELHLPLHICGPLLEKELQYWGMP-EQIIEKCCWIHYIQLKSQKYSLVDFENFFSEYDDEPNDN--CCRTWTKYLWKTFNKPSSSKLAMIYAIIVSIFVILSIFAFIAESHPKFKSNQNTSSKVELIPALNNNEFANHGNSMWIGFQYIDFCCVGFFSVDLFIRFLCTPNRMKFLSNVITVIEIISVIPYYVDIFGHYIER---IYKIELSGFLKVVHVLRIFGVLRILKILRYYSGLQVLVYTLRSSYKDLLLMLTFIGVATLFFSTLIYHVDDQ---NVFTSIPAGFWWSIITMTTVGYGDIYPKYFGGYIVGSACSLVGVLVVAFTVPILVNSFMLYYSHA 467
BLAST of SMED30035396 vs. Planmine SMEST
Match: SMESG000054802.1 (SMESG000054802.1) HSP 1 Score: 198.364 bits (503), Expect = 2.754e-56 Identity = 141/437 (32.27%), Postives = 224/437 (51.26%), Query Frame = -1 Query: 244 SEESSVVKINVRGVRFKVFWNTIKEIPGLSKTILEKGLHNKTK--NEYFFDRDPEVFKCVLNLCRLGEMHIPCTICGPLFNREIKEWGIRMENKVEFCCLMNLTN-----------SMMRIKNLRNFEKFFYKK----SESERNSIKCVSHFRQMIWKVLEQPTSSSLALIYSAVLYLAVMGFLFVFVVSTVN--SVPFTIQ---KLEIKRNVTSLPYVKADFIQ---IIYY---ITVSILTFDLIARTIFCDNLRSHICSCYTIIDVLSLIPFYYNLIASYIETQTLLFSFPTAGTNDVIKVLGITSVLRFFRILRQYRGFQVLLYTMKVSANDLIXXXXXXXXXXXXXXXVIFYVE----GEVPDSHFINIPKSFWWCIVTITTTGYGDMVPKTPLGFLVAGICSLCGVLLIAFTVPILVNNFVLYYTHAAMSSE 1458 ++ + V +NV G+R + + T+K+IP + L + L N NEYFFDR P VF +LN R G++H P +CGPLF E++ WG+ N+VE CC M T + I R E YK+ E E N + +R IW VLE+P SS LA + S + ++ + F + T S+P + + I ++ + IQ + +Y I + + +LI R I + RS IID+ +L+ FY ++ Y + + +I+ + I ++R F++ R G ++L+ T K SA +L L++ F++V + VF+++I+Y E E+ D F +IP WW I T+TT GYGDMVPKT G LV +C++ GVL I+ VP++V+NF ++Y+H S+ Sbjct: 2 TDAENRVILNVGGIRHETYKATLKKIPATRLSKLTEALANYDPMLNEYFFDRHPGVFAQILNYYRTGKLHYPTDVCGPLFEEELEFWGLD-SNQVEPCCWMTYTAHRSTQDTLQILDRIDIDTERTSESELYKRFGLEEEFEDNELSFWQKWRPRIWSVLEEPYSSVLAKLVSGIGISIILISIISFCMKTYPGYSIPLILNHTYNVSIGGDLFQSWSLSQKEIQPHTVFFYTECICNAWFSIELILRMIVTASCRSFFHDVLNIIDIFALLSFYIDVSFVYFNIEK----------SHLIEFMSILRIMRLFKLTRHISGLKILILTFKASAKELSLLVFFLVVFIAVFAALIYYAEKFTKNELND--FTSIPNGLWWAICTMTTVGYGDMVPKTYPGMLVGALCAVTGVLTISLPVPVIVSNFSMFYSHTQARSK 425 The following BLAST results are available for this feature:
BLAST of SMED30035396 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30035396 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30035396 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30035396 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SMED30035396 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30035396 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035396 ID=SMED30035396|Name=SMED30035396|organism=Schmidtea mediterranea sexual|type=transcript|length=1596bpback to top protein sequence of SMED30035396-orf-1 >SMED30035396-orf-1 ID=SMED30035396-orf-1|Name=SMED30035396-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=503bp MKFLNRYSTLKPYRRTGDSEESSVVKINVRGVRFKVFWNTIKEIPGLSKTback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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