Protocadherin
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035296 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 295.049 bits (754), Expect = 3.827e-83 Identity = 215/669 (32.14%), Postives = 351/669 (52.47%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A+D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 294.664 bits (753), Expect = 5.591e-82 Identity = 215/669 (32.14%), Postives = 351/669 (52.47%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A+D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 294.664 bits (753), Expect = 6.025e-82 Identity = 215/669 (32.14%), Postives = 351/669 (52.47%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A+D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 294.664 bits (753), Expect = 6.095e-82 Identity = 215/669 (32.14%), Postives = 351/669 (52.47%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A+D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 294.278 bits (752), Expect = 8.825e-82 Identity = 215/669 (32.14%), Postives = 351/669 (52.47%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A+D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 220.32 bits (560), Expect = 7.641e-58 Identity = 216/759 (28.46%), Postives = 339/759 (44.66%), Query Frame = 3
Query: 180 ENSPIFVRICNVKKT-------FPDIENPTIDNFQNFFRLN--DNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR-IPIIAV----DSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFS--GMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLG----RVEAVDKDIGQNAQMDYFLFNPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT------IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
E++PI I +VK + + + P QN F L+ + + +S+DRE L + K Y R I S S + + V DV DN P F++ ++ +I E++P V ARD D G NG + Y++ N L++ + G ++ DRE +L +IA D G P S+ ++I + DVND+AP F SY E+I I V ATD+D + + S ++SS I I V + D + PI AV D P L++T + ++V DIND+ P + A + L EN + +V D+D G NG ++ +++E ++F L+ T DRE + L + DMG PSL T+ I VV+KD NDN P F ++ +V+I E +P G+++ LKA+D D + +I Y + E F+I G I + + + +V+ +A D L+ ++V I D N P + F +K +G ++A D D G NA++ Y + + S F I +GDI VS LDRE +S+ + A DH + PL +ST +E+I+DDINDNSP F ++ I GT AID D G N + Y + + +F ++ + G++ ++ L E + I ARD G + S + L
Sbjct: 176 EDTPIETIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKH----ILKVTAYERVDPTI-----SAS----TTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKN---LLAINAKSG-----VIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGL-------TIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAA----QKMITLEENVAIGEEVGRVYAIDEDSGPNGIIK--------YSMEGSEDFIIDEDSGLIKT-TKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVNSAP--YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI-DSSQFFRIDPSSGDISVSSD--LDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPV--GTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTL 882 HSP 2 Score: 200.29 bits (508), Expect = 1.272e-51 Identity = 183/604 (30.30%), Postives = 287/604 (47.52%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQ-IMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHE-SVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSP-----LFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI 2216
I V DVNDN P F ++N I EN + A D D G NG V Y++ S+ I ST + + + + D + + ++ AKD P L+S++ + I++ D+NDHAP + E++ G+ +G+V+A D+D I S S I+D+ S G+I T L+ ++ Y + + A D G P+L ++T+ V + DINDN P + N + ++E S I + D D + + +F SI + ++ V+ D +V+ + I +D G L + V + D N P ++ H SV I E+ PIG V LKA D D G NA+I Y + + F IDP SG I+ DRE ++ + V TA DH +N+S I V + D NDN P+F + ++ I E++ +V A+D DIG N +DYFL S LF + R +G + VS K LDRE+ + I ARD G L++++ + + + D+NDN+PTF + L ++ + G+ + T A D D G+NA I + I
Sbjct: 363 ITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLT-IDYSTGE-------VTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDS----GLIKT-TKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYN----VTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVF---SILDIGDQGAILSVSGELKRQDHKVR----VEISATDQG--GLQGRCVVNVFIDDVNSAP--YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS--QFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSK--LDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF--EQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRI 931 HSP 3 Score: 167.933 bits (424), Expect = 1.274e-41 Identity = 150/568 (26.41%), Postives = 256/568 (45.07%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML----SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPS--PLFEIS----RNGDIFVSQKRYLDRE-RVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTF 2093
L I V D+ND+ P+ + EN EV A D D G NG + Y+++ S F++ DS L +K + DRE + L + A+D+G P L +S TI + + D+ND+AP F++ Y E + +G I + A D D ++T + A ++ + G I V+ R+ I A D G L V V + D+N + P ++ + + E+ + + D D G+N ++ +D++ F ++ + +S DRE + + + SD P L T+ I V++ D NDN P F + +I E++P+GT ++ AID DIG N + Y L S ++ F +D SG + DRE + + A D ++++ I +T+ D NDN P F + ++ +I EN + +G + A D D G NA + + +F + LF+I +NG + + + D E + +++ E+ A + L+S+ V I + D+NDN P
Sbjct: 465 LTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGS---EDFII-------DEDSGL-IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIE-EADREVFSILDIGDQGAI-LSVSGELKRQDHKVRVEISATDQGG--LQGRCVVNVFIDDVN-SAPYF----NDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSG---------DISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA---SSGQLSSTVPVRIHVSDVNDNKPAL 1000 HSP 4 Score: 116.701 bits (291), Expect = 6.540e-26 Identity = 145/535 (27.10%), Postives = 237/535 (44.30%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGM-----ITTRVSFDREVQSE---YKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKE----NLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQ--KRYLD 1970
+ +++ D+NDN P+FD+ +N I+E P +++ A D D + + Y I+ A F ++ D L + R+ D + ++ + A D G L + + I DVN AP FN + PE G + + A D D I+ S SSQ I + VSS D + + + A D +P L ++ + V + DINDN P + SS+ ++E+ + +V+ D D G NG V+ L+ + + SIQ F R + +S DRE L I D G PSL+ IT+ + D NDN P F + + I EN P+G+ V + A D D G NA I + + + F+I+ + I TR FD E ++ ++++A++ +++S++ + + + D NDN P L+ F + + +G + A D D QNA ++YFL + L E + G I V Q KR +D
Sbjct: 567 IAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE--DQKITYRIE-EADREVFSILDIG-----DQGAILSVSGELKRQ-DHKVRVEISATDQGG--LQGRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSID-SSQFFR---------IDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSP--QFTSSSY--AATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESS--SSPSIQLFRLDRTSGTLRV-SSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSG-----QLSSTVPVRIHVSDVNDNKPA-LKDFVILMNRFDNVQMARQIGFIPAFDPD--QNATLEYFL-EENDLIEAEKYTGKILVKQEWKRNMD 1063 HSP 5 Score: 68.5514 bits (166), Expect = 3.478e-11 Identity = 41/157 (26.11%), Postives = 80/157 (50.96%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD 899
++ + ++DVNDN P+F++L+++ IAENSP + V +ARD D G+N + + I A + F + + G ++IL + + + + + L+S++ ++I ++DVND+ P N +++ + IG + A D D
Sbjct: 877 EITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNG-----VVRILTRAEFDYEAKANKFFFELQASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPD 1028
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 200.675 bits (509), Expect = 8.166e-52 Identity = 183/606 (30.20%), Postives = 288/606 (47.52%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQ-IMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHE-SVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSP-----LFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI 2216
+ I V DVNDN P F ++N I EN + A D D G NG V Y++ S+ I ST + + + + D + + ++ AKD P L+S++ + I++ D+NDHAP + E++ G+ +G+V+A D+D I S S I+D+ S G+I T L+ ++ Y + + A D G P+L ++T+ V + DINDN P + N + ++E S I + D D + + +F SI + ++ V+ D +V+ + I +D G L + V + D N P ++ H SV I E+ PIG V LKA D D G NA+I Y + + F IDP SG I+ DRE ++ + V TA DH +N+S I V + D NDN P+F +++ I E++ +V A+D DIG N +DYFL S LF + R +G + VS K LDRE+ + I ARD G L++++ + + + D+NDN+PTF + L ++ + G+ + T A D D G+NA I + I
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLT-IDYSTGE-------VTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDS----GLIKT-TKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYN----VTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVF---SILDIGDQGAILSVSGELKRQDHKVR----VEISATDQG--GLQGRCVVNVFIDDVNSAP--YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS--QFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSK--LDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF--EQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRI 572 HSP 2 Score: 180.644 bits (457), Expect = 1.499e-45 Identity = 163/551 (29.58%), Postives = 254/551 (46.10%), Query Frame = 3
Query: 771 IKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR-IPIIAV----DSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFS--GMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT------IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
++I + DVND+AP F SY E+I I V ATD+D + + S ++SS I I V + D + PI AV D P L++T + ++V DIND+ P + A + L EN + +V D+D G NG ++ +++E ++F L+ T DRE + L + DMG PSL T+ I VV+KD NDN P F ++ +V+I E +P G+++ LKA+D D + +I Y + E F+I G I + + + +V+ +A D L+ ++V I D N P FS I E+ + + ++A D D G NA++ Y + + S F I +GDI VS LDRE +S+ + A DH + PL +ST +E+I+DDINDNSP F ++ I GT AID D G N + Y + + +F ++ + G++ ++ L E + I ARD G + S + L
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGL-------TIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAA----QKMITLEENVAIGEEVGRVYAIDEDSGPNGIIK--------YSMEGSEDFIIDEDSGLIKT-TKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI-DSSQFFRIDPSSGDISVSSD--LDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPV--GTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTL 523 HSP 3 Score: 168.318 bits (425), Expect = 9.320e-42 Identity = 150/568 (26.41%), Postives = 256/568 (45.07%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML----SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNP--SPLFEI----SRNGDIFVSQKRYLDRE-RVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTF 2093
L I V D+ND+ P+ + EN EV A D D G NG + Y+++ S F++ DS L +K + DRE + L + A+D+G P L +S TI + + D+ND+AP F++ Y E + +G I + A D D ++T + A ++ + G I V+ R+ I A D G L V V + D+N + P ++ + + E+ + + D D G+N ++ +D++ F ++ + +S DRE + + + SD P L T+ I V++ D NDN P F + +I E++P+GT ++ AID DIG N + Y L S ++ F +D SG + DRE + + A D ++++ I +T+ D NDN P F + ++ +I EN + +G + A D D G NA + + +F + LF+I +NG + + + D E + +++ E+ A + L+S+ V I + D+NDN P
Sbjct: 106 LTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGS---EDFII-------DEDSGL-IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIE-EADREVFSILDIGDQGAI-LSVSGELKRQDHKVRVEISATDQGG--LQGRCVVNVFIDDVN-SAPYF----NDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSG---------DISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA---SSGQLSSTVPVRIHVSDVNDNKPAL 641 HSP 4 Score: 139.043 bits (349), Expect = 8.822e-33 Identity = 121/429 (28.21%), Postives = 201/429 (46.85%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSR--VTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYK 1691
+ + DVN + P F+ F+ KI E+SP V A D DRG+N +VY+I S++F I PS+ + + DRE F +I+ A D +PPL +S I++ + D+ND++PQF SSY E I G + QV A D DI V ++ S+SS + F + + VSS D +PI A D G P+L+A S + + ++D+NDN P E S + L + EN S + + D D G+N + ++ + LF++E ++ E +++T + FD E K + + + G L++T P+ + V D NDN P ++ +N+ + ++ + A D D NA ++Y L L + ++G I + + R + +K
Sbjct: 312 VFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSID----SSQFFRIDPSSGD-------ISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFR------LDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYD----LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIE--EDAEQNGVVRILT--RAEFDYEAKANKFFFELQASSG--QLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPD--QNATLEYFLEENDL--IEAEKYTGKILVKQEWKRNMDVSFK 708 HSP 5 Score: 117.087 bits (292), Expect = 5.129e-26 Identity = 145/535 (27.10%), Postives = 237/535 (44.30%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGM-----ITTRVSFDREVQSE---YKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKE----NLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQ--KRYLD 1970
+ +++ D+NDN P+FD+ +N I+E P +++ A D D + + Y I+ A F ++ D L + R+ D + ++ + A D G L + + I DVN AP FN + PE G + + A D D I+ S SSQ I + VSS D + + + A D +P L ++ + V + DINDN P + SS+ ++E+ + +V+ D D G NG V+ L+ + + SIQ F R + +S DRE L I D G PSL+ IT+ + D NDN P F + + I EN P+G+ V + A D D G NA I + + + F+I+ + I TR FD E ++ ++++A++ +++S++ + + + D NDN P L+ F + + +G + A D D QNA ++YFL + L E + G I V Q KR +D
Sbjct: 208 IAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE--DQKITYRIE-EADREVFSILDIG-----DQGAILSVSGELKRQ-DHKVRVEISATDQGG--LQGRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSID-SSQFFR---------IDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSP--QFTSSSY--AATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESS--SSPSIQLFRLDRTSGTLRV-SSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSG-----QLSSTVPVRIHVSDVNDNKPA-LKDFVILMNRFDNVQMARQIGFIPAFDPD--QNATLEYFL-EENDLIEAEKYTGKILVKQEWKRNMD 704 HSP 6 Score: 90.5077 bits (223), Expect = 5.846e-18 Identity = 66/243 (27.16%), Postives = 114/243 (46.91%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMD-KFSVAFDGVISTKVALVYVSSSFDYRIP----IIAVDSGNPTLTATSTVLVHVTDINDNRPIIE 1136
Q+ +++ D+NDN P F ++ I+E+ P A D D G NG V Y + S+ S L G L++ DRE L + A+D G P L+++ I + ++DVND+AP F Q SY E+ G +G + A D D + ++ + A +++ D + +GV+ + + FDY + + + L++T V +HV+D+NDN+P ++
Sbjct: 410 QIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSG-----TLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVR-----ILTRAEFDYEAKANKFFFELQASSGQLSSTVPVRIHVSDVNDNKPALK 642 HSP 7 Score: 68.5514 bits (166), Expect = 2.856e-11 Identity = 41/157 (26.11%), Postives = 80/157 (50.96%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD 899
++ + ++DVNDN P+F++L+++ IAENSP + V +ARD D G+N + + I A + F + + G ++IL + + + + + L+S++ ++I ++DVND+ P N +++ + IG + A D D
Sbjct: 518 EITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNG-----VVRILTRAEFDYEAKANKFFFELQASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPD 669
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 153.295 bits (386), Expect = 3.914e-37 Identity = 170/673 (25.26%), Postives = 297/673 (44.13%), Query Frame = 3
Query: 444 VADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTI-MMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQ-HLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ-TIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSS 2435
V D NDN PSF +I+E + LP D D + I V+N F L S N+ + L + DRE ++++L++ A+D G P L I+I D ND+AP F++S Y + +I G + V ATD DI SR++ + SA S F+++ GVI+T +L+ S+ + + ++A D G+P+L++++ V + V + P ++I ++N L EN S +A+V+++ + + KL L ++ + + + + DRE H L + G + P + + D NDN P ++ +S+ N G T L A D D+G N I+Y +L E + +ID +G I + D + SE K + A D +++ + + +LD PP+F + + I E+ + L +V A + G + ++ Y L N + QK + D E+ Y + A + + TS++ + I + D+NDN P F P + HL + + A D D+G ++ Y I S+ + F IN G ++ K L +++SA+D G ++++H+ I P K E +++
Sbjct: 112 VDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVN--GQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSN--SNFAISQSGVITTTASLLPAST---HDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYR------DTKL---RLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDG--QIIIEHPQLLTIGDINDNAPQWHSSQIHISL--NRTQGGSRT-LTAKDPDLGQNGWIRYSVLDTELV---SIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTF-DFEKQKSYQTTVIATNANSE--TSTSLISIRLKDVNDNWPIFY---PNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSFSINPVTGEVFAQKPLARGRF---HLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTT 751 HSP 2 Score: 147.902 bits (372), Expect = 1.842e-35 Identity = 164/660 (24.85%), Postives = 304/660 (46.06%), Query Frame = 3
Query: 408 GSGPKFYQLPILVADVNDNV---PSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTI---MMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL-----DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRP-ITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGI 2336
G P +VAD+ D P F++ + +I E++P + +A + GN+ + Y+++ N+ ++ T G + I ++FD E + +Q +IA + + TS+ I I + DVND+ P F + Y E + + V A+D D + + ++S S+S FS+ ++ +V + + + + A D G + + ++ +H+T I+ + + + S R TE+ I V G +V+ + D+N+ + ++ + + R D +V D LNI + +PS + + + + ++D NDNPP F +SI E+L + ++A DKD N +++Y ++S + ID F+G ++T D E YK++ A D I +S++T+ + +LD NDN P+F ++ ++ + EN + ++G+V A DKD +N Q+ Y + N S F I G+++ KR +DRE + I I A D G P +S+ + I + D+NDN P+ + P + + + T I T A+D D G N ++Y Q Q+ ++ S+G +YL + L ++ + D G+
Sbjct: 515 GGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQ-----NQDEHLTVDTMSG-----TVCIQKTFDFEKQKSYQTTVIATNANSE--TSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSS------FSI---NPVTGEVFAQKPLARGRFHLVVSAKDGGGQS--SENSANIHITVIDKDTKTPQFSRSKYEIRT--TEDILPGIAIGSV-------GAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRY-----------LDADVHDTVLLNIQAT---LPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLGNVYT--KRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITP---IVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGV 1123 HSP 3 Score: 145.976 bits (367), Expect = 8.079e-35 Identity = 155/562 (27.58%), Postives = 247/562 (43.95%), Query Frame = 3
Query: 345 DTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIP---IIAVDSGNPTLTATST-VLVHVTDINDNRP-----IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSI 1997
D KQ +Y Q +I + S + I + DVNDN P F ++ + E + + A D D G G V Y I + S I+P T + K L F L++ AKD G +S I I + D + PQF++S Y T E I+ G AIG V A K + S + Q + FS+ D +YV+ D + ++ + + P+ + T V++ + D NDN P ++EI+ + E+ + + V SDKD NG+V + +++ + I F +L T S D E +++L + +D+G+P ++ + + V D NDN P F + ++ +LEN P T V ++ A DKD N QI Y ++ E F ID G + T+ S DREV S + A D + +S+ + +++LD NDNPP L + L +G + A+D D G N + Y S LF + NGD+++ ++ ER R S+
Sbjct: 602 DFEKQKSY----QTTVIATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSFS---INPVTGE----VFAQKPLAR------GRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSK-------VKYSIYSGDQDHN-FSIDED------TGKIYVTRYLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEIS---------IREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTG----QLSTG--SLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRIT-NGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSV 1116 HSP 4 Score: 109.383 bits (272), Expect = 1.030e-23 Identity = 169/694 (24.35%), Postives = 290/694 (41.79%), Query Frame = 3
Query: 255 NFQNFFRLNDNNV-EMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGP-KFYQL--PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKP-SAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFN----QSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDK---FSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSL 2279
N N F+L V E LQ+ +L+ N + D +++ RD +LI G P K QL I + D NDN P F R + ++ N + + A D D G N + Y IK SA SN IS S +SL L + ++ I++A D G+P L+SS + I + +P + S + E+ G + +V + +++ ++ S + Q D+ + + G++ + A ++ + + G + L+ + DINDN P + SS + L T+ +T D D G NG + + + L +++ + + P ++ D + + + D G P+L+T + + D PP F + V I E+ PIGT + ++ A + G + +I+Y L + E+ +D SG + + +FD E Q Y+ A + S I+I + D NDN P F + ++E E L V A D D G ++ Y + + S F I+ G++F ++ L R R+ + + A+D G + +S + I + D + +P F K I T + I AI G +K+ Y+I S F I+ G IY+ + L
Sbjct: 165 NVNNVFKLASRKVNEQLQA----DLVVNGQLD--REF---RDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASL----LPASTHDV------IVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETA-------SEHHLKFLLEKDGQ--IIIEHPQLLTIGDINDNAP--QWHSSQIHISLNRTQGGSRT-----LTAKDPDLGQNGWIRYSVLDTELVSID--------KETGRIFVP-NTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQD-EHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLISIRLK--DVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSFSINPVTGEVFA--QKPLAR---GRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSK------YEIRTTE--DILPGIAI-GSVGAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYL 797 HSP 5 Score: 106.686 bits (265), Expect = 7.393e-23 Identity = 145/551 (26.32%), Postives = 235/551 (42.65%), Query Frame = 3
Query: 807 PQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGN---NGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML---SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDEN-DNPP----KFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLF--EISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKI 2420
P F Q +F PES G IG + ++ ++ ++ P + K G IST L Y S + I + V+ T+ +LV V D NDN P + ++Q +L ++E Q + A TV+D D + V + + N +F L S + E + +V DRE +D ++L I D G P+ ++ + D NDN P+F R + S+ N+ IG+ + ++A D DIG N++I Y + S NF I SG+ITT S S + V A DH ++SS + +T+L +PP + + S H+ EN LG + A Q L S L + + + LDRE + ++ G + + I DINDN+P + + H++L+ T G++ TAK D D G+N I Y++ + I+ G I++ ++ K + A D G P +T + + +SKPP K +
Sbjct: 20 PTFCQCLTKFTVPESAQIGTRIGWISGKREESAAPKYFVVFPDEQTSKFLKVD-ERSGEISTIAHLDYEKRS-KFDIVAVKVEESGETID----ILVEVDDENDNAP----SFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNG---QLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQ-SGVITTTASL--LPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMEN--STLGSIVARVSIAQQYRDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQL--LTIGDINDNAPQWHSSQ--IHISLN-RTQGGSRTLTAK--DPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGG-SPALSTDLQVVADLLDTESKPPQFEKAL 544 HSP 6 Score: 105.531 bits (262), Expect = 1.651e-22 Identity = 106/381 (27.82%), Postives = 165/381 (43.31%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLD-NNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKA 1550
Q+ I + D NDN P F I E+ H + A D D+ NG V Y+I S + + I T Q SL D E ++L + A DLG PP +S++T+ I + DVND+AP+F +S Y E+ +G+V A DKD I+ + S+ I K+ VY S D I I+A D G P ++T++ + V D+NDN P S +V+ ++ I + D D G NG V + + LF ++S + RR +S +R H +L++I SD GVP + + V + + + I + + I ++ P G ++T L A
Sbjct: 822 QVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSS-IEIDQFTGQLSTGSL-------LDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFG---------IDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPP-----SCLSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVVKSNGDVYLRRQLN------ASDER----HQRLSVIVSDQGVPRKSVVCHVPVRISKGSADIQIQEPFQKYIEIPKSCPTGCRLTTLNA 1170 HSP 7 Score: 103.219 bits (256), Expect = 7.959e-22 Identity = 182/712 (25.56%), Postives = 284/712 (39.89%), Query Frame = 3
Query: 384 CILILELSGSGPKFYQLPILVADVNDNVPSFDRLT-FNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAP---QFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDH----------GNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQ-HESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILD-ENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDIG-----QNAQMDYFLFNP--SPLFEISRNGDIFVSQKRYLDRER--VDRYSIEIGARDHGNRPLTSSTT---VEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ---TIFYINTSDGSIYLNKSLQDEHI--LPD---KIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPM 2408
I+IL GS + + VAD NDN P D T +IAE+S + + A D D G NG + + + S L+ P T L L+ L S + +++ L D G P L ++I + A +F + +Y E + +GQ I + + + + I FSV +GVI T + L Y + +I SG T V V V ++NDN P ++ + + EN + SY+A V D D+ ++GQ FN I F H +TAP D EV H L I +D + T +T+ V D NDN P F + +++ G +++A D D + Y L F + P SG + +V Y V TA D+ + ++S+ + V I + E + P F + F F + EN + IG ++ + Y + +P S +F I + G +FV+ +DRE+ + +EI N +TS +I+ D NDN P F +L+L G KI A D D+GEN ++ Y I S I +N GSI LN+ D + P+ +I++ ARD G + + ++ S S P
Sbjct: 1697 LIIILTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFELLEDS-SGSLDLV-PETGD-----LVLRRLSSL-----QSWKIKLRVVDHGVPGLYVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAK-------LQPELAGLTYSIVEGNIDSAFSVDSEGVIRTNLELDREILE-RYSLKVIGTGSGQQIGT---RVDVRVNNLNDNVPSFPMSKPRR-----VPENLRVGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTH------FN---IDQFTGTIH---LTAP---LDFEVLPEHTLTIKATDGSFDTFTN---LTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLD--ARGALTYSLGQGSSSIFRVAPESGALFMKVL--PPAGERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMEN--------SKIGLQIGNLSGEESREFHYRIQDPEASKIFSIDKFGRLFVAGP--IDREQRATHEFQVEI-----DNEMMTSQKVQCKCHVIVLDENDNLPVFT--SVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNE-WNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPF 2340 HSP 8 Score: 92.8189 bits (229), Expect = 1.243e-18 Identity = 160/699 (22.89%), Postives = 296/699 (42.35%), Query Frame = 3
Query: 270 FRLNDNNVEMLQSLDRENLI-TNQKCDTSKQYNYNRDSQCILILELSGSGPKF-YQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLA---RDPDRGNNGSVVYAIKPSAVSN----KFVLISPSTNQG------HDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFN-TPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD-GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQS------EYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS-QTIFYINTSDGSIYLNKSL 2279
+ + + N++ S+D E +I TN + D Y+ L + +GSG + ++ + V ++NDNVPSF P++ R P+ GS V + V N ++ L+S S+ Q + + + D E+ E L + A D G+ ++LTI + +D+ND+AP F++ Y+ +P + GQ ++ A D D +T + +SS F VA + G + KV + Y + + A D+G P+ + + V V I + P + R + EN + I GN E + + + + E+ + F + +L A DRE + H+ + + + S V+V DENDN P+F +S+ +++ G K+ ++ A D+D G N ++ Y +LS L ++P +G I D ++ + V+A + H + + + + + + P F L + H+ E+ + VL ++ A ++ +N + Y L I + G++ + K +LD E S+ + D R ++ ++I+++ +++ +P F K L + I T G + +AID D G + + Y+I Q+ I G I L K L
Sbjct: 1863 YSIVEGNIDSAFSVDSEGVIRTNLELDREILERYS------LKVIGTGSGQQIGTRVDVRVNNLNDNVPSF---------------------PMSKPRRVPENLRVGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATD-GSFDTFTNLTIFV--SDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDARGALTYSLGQGSSS----IFRVAPESGALFMKV---LPPAGERYLVTVTATDNGVPSFSTSVPVSVI---IGEAEPTDKPGFEKAEFRFEVMENSKIGLQI----------GNLSGEESREFHYRIQDPEASKIFSIDKFGRLFVA--GPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGIDVKTGELTL--KTHLDWESEPIISMYLSVSDGNGR--SAVVPLKIVVEPVDEFAPVFT--KSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSISDRQSTVKIEEHTGIIRLQKPL 2503 HSP 9 Score: 78.9518 bits (193), Expect = 2.369e-14 Identity = 127/592 (21.45%), Postives = 236/592 (39.86%), Query Frame = 3
Query: 585 YAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTA----PTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDEN-DNPP---IFYRQHESVSILENLPIGTKVTRLKAID--KDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIH----VTILDENDNPPKFLRTFSFHIKEN-LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIID--DINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ-TIFYINTSDGSIYLNKSLQDE 2288
+ + P ++KF+ + + S ++ + D E +F ++ + + ++ I +++ D ND+AP F + E G + TD D + + + + F +A V A + V+ D Y + I A D G P + + D NDN P+ S ++ N S++ V +D D G N ++ + + S NF + + T P S+ H + ++ SD G PSL+++ +T+ V +PP I+ + S ++EN +G+ V R+ +D + L P+ + ++ ++ DRE SE+ +K +L + I I +TI D NDN P++ + HI N +G + A D D+GQN + Y + + + G IFV +D + A D G+ L ST ++++ D D P F K + + +T GT + A ++ G + +I Y++Q+Q ++T G++ + K+ E
Sbjct: 57 FVVFPDEQTSKFLKVD-------ERSGEISTIAHLDYEKRSKFDIVAVKVEESG----ETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGD-GPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVF----SRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKT---SAPSNSNFAISQSGVITTTASLLPAST--------HDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSSALCPQQTDQAHV----YLLLLCGILDRETASEHHLK------FLLEKDGQIIIEHPQLLTIGDINDNAPQW-HSSQIHISLNRTQGGSRTLTAKDPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNT--IDCNIGSEIKFRVRAEDGGSPAL--STDLQVVADLLDTESKPPQF--EKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFE 604 HSP 10 Score: 71.2478 bits (173), Expect = 4.706e-12 Identity = 94/339 (27.73%), Postives = 160/339 (47.20%), Query Frame = 3
Query: 1350 FDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHES-VSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSG-MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILD---ENDNPPKFLR-TFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQ-HLNLSIETIQGTKIFTAKAIDNDTGENAKIV--YTIQSQTIFYINTSDGSIYLNKSLQDEHILPDK-IIISARDS 2330
DRE H L II +D G + + T + V V D+NDN P S + I E+ +G + R +A D DIG N + + L + + ++ P +G ++ R+S +QS +K+K DH + + + ++ + E P +FL+ T+ I E L R + + K + A + Y + N F + G I + + LDRE ++RYS+++ G + T V++ ++++NDN P+F KP + NL + + T AK +DN +V + Q+ T F I+ G+I+L L D +LP+ + I A D
Sbjct: 1687 LDREASQEHLLIIILTDGGSRNDSCT--VRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFELLEDSSGSLDLVPETGDLVLRRLS---SLQS-WKIKLRVVDHGVPGLYVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLP----RGQFIAKLQPELAGLTYSIVEGNIDSAFSVDSEGVIRTNLE--LDREILERYSLKVIGTGSGQQ---IGTRVDVRVNNLNDNVPSFPMSKPRRVPENLRVGSYVAT--VGAKDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPL-DFEVLPEHTLTIKATDG 2007
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-4 (Cadherin-4 [Source:UniProtKB/TrEMBL;Acc:A0A1C3NSI5]) HSP 1 Score: 141.739 bits (356), Expect = 1.726e-33 Identity = 142/554 (25.63%), Postives = 247/554 (44.58%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVI---STKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLE-SIQNFENRRHY----KLVTAPTSSFDREVKDHHQLNIICSDMGV-----PSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML------SPECLENFNIDPFSGMITTR--VSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHG 2021
+ + + DVN++ P FD +++ +I+EN ++ A D D GNNG + +++ + + + I T +K+L+S DRE + +IA D G P S + I + DVND+ P+ R PE + G + + A D+DI S++ +++ +D S G I + + L Y + F + + I D G+P L+ + + V + DI N IE + + EN + + + + + K+ G+ +V+ + NLE I + H+ K T DRE K + + + D P + + + D ND+ P+ + S+ EN P + +++A D D N ++ P+ F ID SG ITT DRE QSE+++ + D ++ S++ + V +LDENDN P F + + ++ G L R+ AVD D G+NA++ Y + F I NG+I S+ + D + Y++ + A DHG
Sbjct: 706 MKLRIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVISIDAKTG-------IVKLLKSLDREDQDVHTFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEKVPFRIDHHS----GCIFIHAPEYPLDYHKTPF-FNLSIEVADHGDPILSTSCHLHVELVDIAHNHLAIEF--DDVAKEASVYENSEIGTEV--IMIEAKETGDEQKVKAE-------NLEYRIIGGDGWPHFSIDQKGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDVLHVFIRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDPQSF--FRIDLTSGYITTSGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFTQAIHHYSVRSKFAGKLCRIFAVDADEGENARLTYNITEGDARFSIDNNGNIIASEAIHGD----ESYALTVQATDHG 1230 HSP 2 Score: 140.584 bits (353), Expect = 3.205e-33 Identity = 174/663 (26.24%), Postives = 290/663 (43.74%), Query Frame = 3
Query: 435 PILVADV-NDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQ-NFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKD--ENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY------MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYD-----HLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLEG--VLGRVEAVDKDIGQNAQMDYFLF-----NPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
PI++ + N + P F ++ E++P V A D D G NG + Y I A S+ VL + + L L E+ + QL + A D G P +S T+K+ I DVN+H+PQF++ SY E+ G+ I +V A D D + I S + + S I K +V + S D + IIA D G P + + + + V D+NDN P + Q++R + E+ ++++ + D+D G N +++ +L N E + ++ + AP D L+I +D G P L+T+ + V + D N F + S+ EN IGT+V ++A K+ G ++K ++ + +F+ID G + T DRE +S Y + A D + R + + + ILD ND+ P + + + EN V+ +VEA D D N +F +P F I +G I S R LDRE+ + + + D G L S+ V + + D NDNSPTF + H + S+ + K+ A+D D GENA++ Y I + ++G+I ++++ + + + A D G
Sbjct: 594 PIIIQESENKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEV-LDVQLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVIS------IDAKTGIVKLLKSLDREDQDVHTFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVV----QHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLK------FLLNSEKVPFRIDHHSGCIFIHAPEYPLDYHKTPFFNLSIEVADHGDPILSTSCHLHVELVDIAHNHLAIEFDDVAKEASVYENSEIGTEVIMIEA--KETGDEQKVKAENLEYRIIGGDGWPHFSIDQ-KGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDVLHVFIRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFTQ---AIH-HYSVRSKFAGKLCRIFAVDADEGENARLTYNITEGDARFSIDNNGNIIASEAIHGDESYA--LTVQATDHG 1230 HSP 3 Score: 125.561 bits (314), Expect = 1.229e-28 Identity = 165/648 (25.46%), Postives = 275/648 (42.44%), Query Frame = 3
Query: 444 VADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS-SRVTIMMSPSASSQ------------------IMDKFS-----VAFDGVI--STKVALVYVSSS-FDYRIP------IIAVDSGNPTLTATSTVLV-------------HVTDINDNRPIIEIASSNQNN----------RLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFD----REVKDHHQLNIICSDMGVPSLTTTRP-------------------------ITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENF-NIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENL---EGVLGRVEAVDKDIGQNAQMDYFLF--------NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTF 2093
+ DVNDN P+F F I+E++ V + A D D +G + +++ V +P + +S L + DRE + ++LI A D G + L I ++DVND PQF + FN + I D D+S + V+ P + + + +K AFDGV STKV + SS D R P I+A +S T+ + L+ +V +N I+++ S+Q + RL + +N + + V + + + +E L + NL + ++ R++ + A + FD R V D L I GV +T +P I V V D+NDN P F + S+ ++E+ IG ++ +A D N I+Y L P + +F N++ +G++T D E S K+ A D + + + + ++++DENDN PKF + + +KEN E VL V+A+D D + Y L P F I+ NGD+ +SQ +D E++ +Y++++ A+D G PL S +EI ++D ND++PTF
Sbjct: 2702 IGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSL---------VEENPYFDLNENSGW-LTVASQLDREKIDHYKLIARATDEGG--FNTDLPFTIVVSDVNDSPPQFEKE--EFNIDLHLPSTSPILHFSIKDDDLSPNNVSQFFIPKGNEEGVFWIDSNNDLLLKRPEIVENKMQYQLKVTAFDGVFETSTKVKINLKSSKDSDIRCPEANKTVILAENSKKGTVVLGESSLLGPNVTFKLSDNDGNVFVVNFRNGIVKVKESDQIDYEKNQQLEFHRLTIQDNSEVCKELITVVIENLNDNRPKIIEKLLKVSIDENLPTSED--ARQYITRIVAEDADFDEIKFRMVDDFGGLFQIDDINGV--VTVVKPLDSEILGFFNLTVVASDGEFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGD--QNETIEYYLKPSDVTSFVNLNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVL-TVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQS--IDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTF 3326 HSP 4 Score: 114.775 bits (286), Expect = 2.847e-25 Identity = 145/597 (24.29%), Postives = 258/597 (43.22%), Query Frame = 3
Query: 177 EENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNN--VEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD------ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQ---VECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILEN-LPIGTKVTRLKAIDKD-IGVNAQIKYMLSPECLEN-------------FNIDPFSGMITTRVSFDREVQ--------------SEYKVKATAYDHLILRMNSSITIHVTILDE--NDNPPKFLRTFSFHIKEN 1823
E+ RI F +I+ +D+F F+++D N V +++ LD E L +N + ++ G + + V D NDN P+F++ T++ K+ E+ E+ A D+ N ++ Y +KPS V++ FV ++ T L + + D E +L ++AKD G PPL + ++I + D ND+AP+F + Y E+ G+ + V A D D +S + I+ + + ++ F++ +G V +S S DY + +IA D G P L + + + +HV D ND+ P + + N ++ E + K +VSD D NG VE + D ++F+ +L+TA + + KD + L +I D V TT P+T+ ++ + + P ++ L+N LP G + RLKA D+D N +++ L +++ F +DP +G I + S + + S +V T+ D+ ++ SI I +DE + +F R S H+ N
Sbjct: 3028 EDARQYITRIVAEDADFDEIKFRMVDDFGGLFQIDDINGVVTVVKPLDSEIL---------GFFN-------LTVVASDGEFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQ--NETIEYYLKPSDVTS-FVNLNAQTGI-------LTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVL-PFAINSNGD-------VLISQSIDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFD----DCNMTALVQEGEAIGHRLLKFSVSDLDGPKNGAPFTVEIQGDG--------AKSFKVNEKLELLTAKKLEYRK--KDKYLLTVIAKD--VKGKTTDCPLTIFIRQTSRHAPTMKPMKIQINTLQNELPEGI-IGRLKASDEDEEDQNGLLRFGLVEGSIQSPRAQVQESRSTHLFRVDPNTGDIWSDHSITQGLHTFNVTVTDSKFNTVSYVEVHVTSIDNDVIDHAVSIRIRSMSVDEFMRKHVKEFRRIISHHLNLN 3573 HSP 5 Score: 105.145 bits (261), Expect = 2.201e-22 Identity = 135/540 (25.00%), Postives = 238/540 (44.07%), Query Frame = 3
Query: 702 DEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNL-------ESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIIC-SDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGV--LGRVEAVDKDIGQNAQMDYFL--FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQ 2282
D+ +Q+ L+ +D S+LT+ + D+ND P F Y + ES +G + V ATD D + + + + SQ FSV G I+ L + + + I A DS NP AT+TV V++ + P SN + + E+ + I +V Q+E ++D F + +S F R + SS DRE K+ ++ I + GV ++TT +TV + D NDN P F+ +E +I E+ +GT VT A+D+D + +I++ L E F+++ SG +T DRE YK+ A A D N+ + + + D ND+PP+F + F+I +L + D D+ N +F+ N +F I N D+ + + ++ + +Y +++ A D +ST V+I + D+ P+ + + L+ + +GT + ++ G N + +F +N +G + + +S Q
Sbjct: 2470 DKRYQIPLVVEDATGRRAFSTLTLSV--IDINDKPPFFVLPFYSTSISESAKEGDTVMMVSATDDDENDTIEYSLLDGSESQF---FSVHPRQGTITVAKKLEH-KAGVTLSLTIKATDSANPPHHATTTVEVNIASESVKVPRF----SNSHYLFSVMEDADVGNVIGRVQ----------QMETEIDE-IRFTIVPGSEESDSFLPFSVERSTGKIIV-KSSLDRERKNQWKMTIRADAAGGVHAITT---VTVDIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEEN-PYFDLNENSGWLTVASQLDREKIDHYKLIARATDE--GGFNTDLPFTIVVSDVNDSPPQFEKE-EFNIDLHLPSTSPILHFSIKDDDLSPNNVSQFFIPKGNEEGVFWIDSNNDLLLKRPEIVENKM--QYQLKVTAFDG---VFETSTKVKINLKSSKDSDIRC--PEANKTVILAENSKKGTVVLGESSL---LGPNVTFKLSDNDGNVFVVNFRNGIVKVKESDQ 2970 HSP 6 Score: 80.8777 bits (198), Expect = 5.871e-15 Identity = 146/661 (22.09%), Postives = 265/661 (40.09%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDE-EFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR--IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAK-------VTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRP--ITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFD-REVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDIGQNAQMDYF-LFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-FYINTSDGSIYLNKSLQ--DEHILPDKIIISARDSGII 2339
F + + D NDN P F T + E+ + + A D DRG NG V Y+I N+ L G ++++ + D E+ E L + A D L +++ I ++ +F++ Y+ +S G + + A V+ + P+ + F V +S V L + +R + A+ + V+ + N + PI Q R + EN + S + V+ D+D G+NG V ++ + +F+++ Y SFD E + + DMG P + P I V V DEND PP F +S++ LP V+ +D+ ++Y + + + F++D +G + + S ++ + ++ D + ++S + ++ + ++ KF R + + EN G + IG ++D+F + NP F I + S LDRE+ + + A+ H P+ + V + I++IND +P F+ G +++I + GT + K IDND G+ V TI S+ + Y G + L K L +E L + A+D+G +
Sbjct: 1450 FATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSI---VSGNEESLFKIDAKSG-----EVRLAKPLDPELQHVESILRIRAIDSAANSLKDEMSLHIRNSNEAPETAKFDRKVYQTTLYDSTRPGTPVLVLNALHH---GTVSYKLEPNCTF-----FEVH---TLSGAVHLATWLTKLKHRKSVECTAIVESTEGQQDIAKVIAKIIRTNQHSPIFR----RQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDEDPGSNGLVGYRMLSPKDEQMFSVD---------QYSGAIRTQMSFDFEKMKEYSFYVQAFDMGQPPRRSLMPSLIVVTVIDENDEPPRFPSNSLDISMI--LPTANGVSVGGQTAQDMDSVGSLRYFIKDQSVP-FSVDSKTGDVLVKDSNGISDMTKLFDLEVFVTDG---KQSASYVMKISTISTENSKFKFTRNEYHTSLIENTTLPPGSIILSVATIGD--KLDHFSIVNPHEAFFIHPGTGVISSSGIALDREKSAIIRLVVQAKSHEKNPVMARALVVVGIENINDETPIFM----GTPYDITIGHSDIGTVVLEPKVIDNDEGD----VVTISSENMPEYFKIVGGKVVLGKKLPSIEEEDLEFNFKLIAKDNGSV 2062 HSP 7 Score: 80.1073 bits (196), Expect = 9.415e-15 Identity = 139/635 (21.89%), Postives = 266/635 (41.89%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHN---EVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII------EIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECL---ENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHI---KENLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ-TIFYINTSDGSIYLNKSL 2279
I + D ND+ P + + +AENSPA+ +VE A D D +++ I+ + F + G+ ++ ++ L DRE E +L + D G P L S++ + +++ D ND++P F Q+ + ++ S G+ + ++FA D D +R+T ++ + +FS+ +G I +A + Y + + A D G P +T +V + +P EI+ + + +++ Q + K+ SD D D + +F++ +L+ A + + +LNI +D +T + + V + P F H + E + +GT++ LKA + +G + + S + + + ++P SG + D E + M S T V I DENDN P F+ +F + ++ VL V A DKD G+N + Y + N LF+I +++G++ +++ + + V+ + I A D L ++ I + N+ T + L T GT + A+ + T + Y ++ T F ++T G+++L L
Sbjct: 1034 IRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDPQSFFRI---DLTSGYITTSGIRRL---DREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFTQAIHHYSV-RSKFAGK-LCRIFAVDADEGENARLTYNITEGDA-----RFSIDNNGNI---IASEAIHGDESYALTVQATDHGTPGQQFAATRVVLTANSAGQKPRKSKNSPPEISGKKSDYVIPISDADQVGLTVGKLEASDADGDELWWSISSGDPDSVFDVRQDTG-------QLLLAKKVELLK--RGELRLNISVTDGQAWDHST---VIIQVSRQISQRPKFSASHYQTDVSERVAVGTQIYTLKASGESLGTKPLVFNLFSVDDVAMEDKIRVEPSSGNVIVMEPLDYEAARRIRAVVQVQQ---ANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESI-LRIRAIDSAANSLKDEMSLH--IRNSNEAPETAKFDRKVYQTTLYDSTRPGTPVLVLNALHHGT-----VSYKLEPNCTFFEVHTLSGAVHLATWL 1629 HSP 8 Score: 70.4774 bits (171), Expect = 9.628e-12 Identity = 140/609 (22.99%), Postives = 250/609 (41.05%), Query Frame = 3
Query: 657 SSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKD------------HGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSIT---IHVTILDENDNPPKFL-RTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLF----NPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFY-INTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
S+ K+ + S DRE ++++ + A G + + T+ +DI DVND+AP F+ RF E G ++ A D+D S I S + D ++ + V+S D Y++ A D G T++V +D+ND+ P E N + L S S I ++ D D GN V NN L L+ + EN+ Y+L ++FD GV T+ + + +K D+ +++V + EN GT V ++ +G N + + LS F ++ +G++ + S + + +++ + L ++ NS + I V I + NDN PK + + I ENL + + + + ++A D F + LF+I NG V+ + LD E + +++ + A D T+ + + D NDN+PTF + + + E+I G ++ +A D E + T F +N G + L K L E + K+ + A+DSG+ P T + + ++ + + P
Sbjct: 2662 STGKIIVKSSLDRERKNQWKMTIRADAAGG--VHAITTVTVDIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEENPYFD---------LNENSGWLTVASQLDREKIDHYKLIARATDEGGFNTDLPFTIVV--SDVNDSPPQFEKEEFNIDLHL------PSTSPILHFSIKDDDLSPNNVSQFFIPKGNEEGVFWIDSNNDLL-LKRPEIVENKMQYQL---KVTAFD----------------GV--FETSTKVKINLKSSKDSDIRCPEANKTVILAENSKKGTVVLGESSL---LGPN--VTFKLSDNDGNVFVVNFRNGIVKVKESDQIDYEKNQQLE---FHRLTIQDNSEVCKELITVVIENLNDNRPKIIEKLLKVSIDENLPTSEDARQYITRIVAEDADFDEIKFRMVDDFGGLFQIDDING--VVTVVKPLDSEILGFFNLTVVASDG---EFEDKATILVTVIDQNDNAPTFEKSTYSMKV-MESESI-GYELAHFRASGGDQNETIEYYLKPSDVTSFVNLNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAP 3214 HSP 9 Score: 66.2402 bits (160), Expect = 1.662e-10 Identity = 133/575 (23.13%), Postives = 243/575 (42.26%), Query Frame = 3
Query: 729 AKDLGNPPLTSSLTIKIDI-TDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVEC-KLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQ-LNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN---------FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKENL-EG-VLGRVEAVDKDIGQNAQMDYFLFN--PSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI--ETIQGTKIFTAKAIDNDTGENAKIVYTI-----QSQTI--FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLN 2372
A+++ P + + ++I + + + HAP F + Y +TPES GQ + + AT D + + +S S +I + G ++ L Y + Y + ++A SG +++ + +V + D+ND P E S+ + + ++++ + +I ++ +D D N+ E KL + E++ N + P D +D + LN+ +D G+ + + ++ PP F + H + LEN + A+ G +++ L+P N ID +G I + Y++ D R S++T+ +++D ND PP F+ F S I E+ EG + V A D D +N ++Y L + S F + R G I V++K L+ + S+ I A D N P ++TTVE+ I + P F H S+ + G I + ++ + E I +TI +S + F + S G I + SL E K+ I A +G + TT ++ +
Sbjct: 2157 AREVTRPKMIAKAQVEIIVKSGITTHAPVFEKLKYTASTPESTSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPE-----TGDVTITGQLDYEKTQ-KYDLKLVATSSGK-QVSSEAEFIVLIEDVNDEMP--EFIRSDVSAK--ISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKIVDGDETLFNISPATGELSLARPVEQDDLVNEDTKKVLNVSVTD-GMFTAYAKLVVEILRSGSMQPPPRFEQSHYVANALENTIVNKSALLTVAVK---GGVPPLQFSLAPTTSSNSSTSKEAWPVAIDRKTGRIHVSRVLNYHRDKRYQIPLVVEDATGRRAFSTLTL--SVIDINDKPPFFVLPFYSTSISESAKEGDTVMMVSATDDD--ENDTIEYSLLDGSESQFFSVHPRQGTITVAKK--LEHKAGVTLSLTIKATDSANPPHHATTTVEVNIASESVKVPRF----SNSHYLFSVMEDADVGNVIGRVQQMETEIDE---IRFTIVPGSEESDSFLPFSVERSTGKIIVKSSLDRERKNQWKMTIRADAAGGVHAITTVTVDIG 2703 HSP 10 Score: 55.4546 bits (132), Expect = 3.375e-7 Identity = 81/375 (21.60%), Postives = 154/375 (41.07%), Query Frame = 3
Query: 684 SFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTV-SDKDHGNNGQVECK-LDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDE-NDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT 1799
+ DRE +L++ AK P+ + + + I ++ND P F + Y S + G + + D D VTI +S + + F + V+ K ++ +IA D+G+ V + V D RP+ S N ++ E+ + ++ + KV S + G + + LD F+++ + + K++ +F+ E + ++ P + + ++VK + P+F + + S E+ IG ++ +KA D N I+Y LS ++ I P +G +T D E +Y +K A +++S V I D ND P+F+R+
Sbjct: 1941 ALDREKSAIIRLVVQAKSHEKNPVMARALVVVGIENINDETPIFMGTPYDITIGHSDI-GTVVLEPKVIDNDEGDVVTI-----SSENMPEYFKIVGGKVVLGKKLPSIEEEDLEFNFKLIAKDNGS-VHRVEEPVKIRVVD--KARPVF---SQNVYTAVISKESTKKSTVLVKVMAKSSLQSKSKGLIGYRILDKKSPFSVDFLTGEVRLNNLKMLAETNYTFEVEAR----------EVTRPKMIAKAQVEIIVKSGITTHAPVFEKLKYTASTPESTSIGQRLLTIKATTSD--ENDTIEYSLSGS--KDIEIHPETGDVTITGQLDYEKTQKYDLKLVATSSG-KQVSSEAEFIVLIEDVNDEMPEFIRS 2288 HSP 11 Score: 55.4546 bits (132), Expect = 3.461e-7 Identity = 62/280 (22.14%), Postives = 126/280 (45.00%), Query Frame = 3
Query: 1617 FNIDPFSG---------MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTG---ENAKIVYTI--QSQTIFYINTSDGSIYLNKSLQDEHILPD---KIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPP 2405
F++D +G + T +F+ E + + K A + + + S IT H + + K T S ++ L ++A D +N ++Y L + GD+ ++ + LD E+ +Y +++ A G + ++S ++I+D+ND P FI ++ S T Q I +A +D E+ K++Y I +T+F I+ + G + L + ++ + ++ + K++ + G+ T + L + +RSG +PPP
Sbjct: 2129 FSVDFLTGEVRLNNLKMLAETNYTFEVEAREVTRPKMIAKAQVEIIVKSGITTHAPVFE------KLKYTASTPESTSIGQRLLTIKATTSD--ENDTIEYSLSGSKDIEIHPETGDVTITGQ--LDYEKTQKYDLKLVATSSG-KQVSSEAEFIVLIEDVNDEMPEFIRSDVSAKISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKIVDGDETLFNISPATGELSLARPVEQDDLVNEDTKKVLNVSVTDGMF--TAYAKLVVEILRSGSMQPPP 2395 HSP 12 Score: 52.7582 bits (125), Expect = 1.819e-6 Identity = 150/686 (21.87%), Postives = 263/686 (38.34%), Query Frame = 3
Query: 357 QYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVE----LPL---ARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDS---SLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSL--TIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP-IIEIAS-SNQNNRLVLTENCQSNSYIAKVTVSDKD-HGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDH-LILRMNSSITIHVTILDENDNPPKFLRTFSFHI--KENLEGVLGRVEAVDKDIGQNAQ---MDYFLFNPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIII-DDINDNSPTFIEPKPGQHLNLSIETIQ----GTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
+ + + +C I+E + ++ + N + P F R + I EN P + V LPL A D D G+NG V Y ++SP Q S ++ SFD E +E+ + A D+G PP S + I + + D ND P+F +S + G ++G A D D S + + SV F + +K V V S +G +T + V VTD + +++I++ S +N++ T N S I T+ + + KLD+ + N + F ++++ + DRE +L + + + V +++ ND PIF ++I + IGT V K ID D G I PE F I ++ ++ E E+ K A D+ + R+ + I V + P F + + KE+ + V+ + K Q+ + Y + + F + G++ ++ + L Y+ E+ AR+ + + VEII+ I ++P F + L + T + G ++ T KA +D EN I Y++ I+ G + + L E + + A SG
Sbjct: 1631 KLKHRKSVECTAIVESTEGQQDIAKVIAKIIRTNQHSPIFRRQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDEDPGSNGLVGYR-----------MLSPKDEQMFSVDQYSGAIRTQMSFDFEKMKEYSFYVQAFDMGQPPRRSLMPSLIVVTVIDENDEPPRFPSNSLDISMILPTANGVSVGGQTAQDMD---------SVGSLRYFIKDQSVPFS--VDSKTGDVLVKDS-----------NGISDMTKLFDLEVFVTDGKQSASYVMKISTISTENSKFKFTRNEYHTSLIENTTLPPGSIILSVATIGDKLDHFSIVNPH--EAFFIHPGTGVISSSGIALDREKSAIIRLVVQAKSHEKNPVMARALVVVGIENINDETPIFMGTPYDITIGHS-DIGTVVLEPKVIDNDEGDVVTISSENMPEY---FKIVGGKVVLGKKLPSIEEEDLEFNFKLIAKDNGSVHRVEEPVKIRVV----DKARPVFSQNVYTAVISKESTKKSTVLVKVMAKSSLQSKSKGLIGYRILDKKSPFSVDFLTGEVRLNNLKMLAET---NYTFEVEAREVTRPKMIAKAQVEIIVKSGITTHAPVF------EKLKYTASTPESTSIGQRLLTIKATTSD--ENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVATSSG 2262 HSP 13 Score: 52.373 bits (124), Expect = 2.548e-6 Identity = 121/484 (25.00%), Postives = 207/484 (42.77%), Query Frame = 3
Query: 1071 LTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDN-NYLFNLESIQNF-ENRRHYK--LVTAPTSSFDREVKDHH-QLNIICSDMGVPSLTTTR-----PITVVVKDENDNPPIFY-RQHESVSILENLPIGTKVTRLKAIDKD---------IGVNA--QIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGR--------VEAVDKDIGQNAQMDYF---LFNPSPLFEI-SRNGDIFVSQKRYLDR-ERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGK---SKPPPM 2408
L T+ + + V D ND P+ + Q + ++ + S + +V SD D G N + L N ++ F +E + + + RH K + S DR + ++ N + L T R P ++V NP I RQ ++ L++ P + LK +K+ +G + ++++ML + N + P + +T + D +S + + ++ N ++TI + L E+ +FL +K + +GR VE D ++Y L N + F I S+NG + VS K ++R ERV Y+ ++ A HG + V I I D ND++P F K + + I G + A D D GEN KIVY S+ IN + G I L + + + P + A D G +P + S+L+L F ++G +KP P+
Sbjct: 133 LETTARIHLRVIDRNDASPVFLVG--EQGYEAEIDDDLEPFSTVLRVEASDADIGINSAIYFSLVNRSHDFIVEPVTGWVRSLRHVKPGKYSLKVKSEDRASRLYYFDENEVQPSWTADVLITVRETKPKPRRILVDQRKINPNILNNRQLAAIITLKDSP-NDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAK---NGSQVPKNTNVTLTIGEDYIRRSGFSISKKP----VIPTNETVTIQIERLAEH--LIRFLDNEKLTLKTDEMAPIGRILYRMNVNVENPDDVSLIRYSLEYSKSDLPNATLPFAIGSKNGILRVSAK--INRSERV--YNFKVIASLHGINEKLAEKDVSIEILDSNDHAPVF-SAKWMRQTPIVIGK-PGDVLVKVDATDQDEGENGKIVYKFTSELPLEINANTGEITLVEVPKKGNSWP--ATVWAIDLG-LPLSRMSALNLMFYKNGTKIPAKPKPI 595
BLAST of Protocadherin vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 134.035 bits (336), Expect = 3.134e-31 Identity = 164/592 (27.70%), Postives = 257/592 (43.41%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQ-GQAIGQVFATDKD---ISSRVTIMMSPSASSQIMDKFSVA-FDGVISTKVAL-----VYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII--EIASSNQNNRLVLTENCQSNS-YIAKVTVSDKDH--GNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQ--LNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQI-KYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYD--HLILRM-----NSSITIHVTILDENDNPPKFLRTFSFHIKENL-EGV-LGRVEAVDKDIGQNAQMDYFLFN----PSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPT-FIEPKP 2108
++ I++ DVNDN PSF+ + ++ E+ ++V A D D+ +N + Y + + T+ G + + + D E +++ L+LIA D G T+++ I I+ DVND+APQF Q Y E V + + V ATD D SSR+ + + ++ F + + G I AL V S + + A+D L + V V+V DINDN PI + + NR E S+ Y V D D N +E + N L N ES+ F ++ + A S DRE+ + + + +D GVPS +T+ V D NDN P F + S+ E PIG V A D D + Y LS E + F + + V R Q T D HL +R+ ++ +HV ++D ND+ P ++E++ G +GR A D+D G A+ F N P F I ++G + V+ LDRE + Y++ I A D+ N V + + D+NDN P + P+P
Sbjct: 1320 KVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSN--LRYHL--IGAGGGRIPFGVRTDSG-----TIFVKEPLDFEASDQYHLVLIASD-GRHNATTNVYIHIE--DVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEV---FRIGKYSGTIELVKALDRDPPAGVPS---WNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENR----EPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESV--FRIDQNTGKIFA-MRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEES-DYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTAR---FRINRQSDPKRQFTIDQDGTLRVAHT--LDREDIAVYNLIIEAYDNSNN--IGRQMVAVYLQDVNDNGPEPYTVPRP 1878 HSP 2 Score: 122.479 bits (306), Expect = 1.034e-27 Identity = 181/697 (25.97%), Postives = 293/697 (42.04%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNP-PLTSSLTIKIDITDVNDHAPQF-NQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSA-SSQIMDKFSV-AFDGVISTK---VALVYVSSSFDYRIPIIAVDSGN----PTLTATS--TVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSN-SYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVT-APTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML-----SPECLENFNIDPF------SGMITTRVSFDREVQSEYKVKATAYDHLILR-MNSSITIHVTILDENDNPPKFLRT----FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSP----------LFEISRNGDIFVSQ--KRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFI----------EPKPGQHLNLSIETIQGTKIFTAKAIDNDT-GENAKIVYTIQSQT------IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGI 2336
L I + DVNDNVP+F R + ++ E+ P + + A D D G+N + Y++ ++ F S N + S K+++ E ++ + A+D G P L+SS I I + ND + F S Y E G + Q+ A D D M + S+Q M+ FS+ G++ + A + + +I D G+ P+ T TS T+L+ + D+N+N+P + + ++ +++ I KV +D D NG + L Y ES + F R ++T +P FDRE + + + +D G L +V V D NDN P F R S+ +GT V + A D D NA+I Y L + E +N ++D F SG IT + Q ++ A D+ I + SS + + +LD+ PK+ + + EN+E V+ R AV +N+ + Y L F NG+ +V LD E+V+ Y++ + A D +R + S+ T + + D+ND P F E P +HL E G I T KAID D+ G ++ Y I + F I+ G I+ N+ E I + + A D +
Sbjct: 628 LTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVD----NHNF-----SINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL---YYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQN-DLDFFELVNRRSGEITLIKPIPMKTQ-KFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSR-VASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHL----EKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSV 1305 HSP 3 Score: 115.161 bits (287), Expect = 1.748e-25 Identity = 163/697 (23.39%), Postives = 287/697 (41.18%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLK-LKILQSFDREI---------DEEFQLILIAKDLGNP-PLTSSLTIKIDITDVNDHAPQFNQS---------SYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQI--MDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP--IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKL--VTA---PTSSFDREVKDHHQLNIICSDMGVPSLTTTR-------PITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF--LRTFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDI--FVSQKRYLDRE---RVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIF----TAKAIDNDTGENAKIVYT------IQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISAR--DSGI 2336
F Q + V D+NDN P F+R ++ ++ V A D D +N + Y+++ I + + H + L +++ EI ++F +IA D G P L SS + +++ D AP++ S + I++ +A+ + + D+ ++T P A S+ +KF + V + + +Y + + A D + +T T +V V D+ND P +++ + + + E+ + + VTV D ++G N + + N E +H+++ +T P FDRE D + L + SD V +L + +V+ D NDN P F Q + E+ G V +KA D D N + + + F + SG I + D E +Y + A D R N++ +++ I D NDN P+F + + I+E+++ VL V A D D + + + E+ R G + + LDR+ V ++ + A D L V++ + DINDNSP F E G ++ + E I ++ A+ D+ T ENA I Y I +++F I+ + G I+ +SL E + II R D G+
Sbjct: 962 FCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLE----------IDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGP-----QNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFG-YIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGV 1638 HSP 4 Score: 114.775 bits (286), Expect = 2.558e-25 Identity = 168/674 (24.93%), Postives = 276/674 (40.95%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPL-----ARDPDRGNNGSVVYAIK-PSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---------GVISTKVALVYVSSSFDYRIPIIAVDSGNP-TLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL------DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPI--------GTKVTRLKAIDKDI-GVNAQIKYMLSPEC----LENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSS-------ITIHVTILDENDNPPKF-LRTFSFHIKENLEGVLGRVEAVDK-DIGQNAQMDYFLFNPS----PLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHL---NLSIETIQGTKIFTAKAIDNDTGE-NAKIVYTIQSQT---IFYINTSDGSIYLNKSL 2279
+ L I + DVN+N P F IA+ + + P A D D NG +VY++ + S K +I T L FDRE + + A D G+ PL +++ D+ND++PQF + SY + G ++ VFA D D + I S + ++ D G I+ + + F + +IA D+G P L +++ V ++V D P + S + + + EN + N I + N V KL N FEN + V D E +++ L + +DM + +T+ V V+D ND P F + +I E + G + +KAID D G ++ Y + E ++F ID +G I FDRE Y + A D + + + + + + I D NDN P F + + +KE+ EG V + D+ +++ + Y L P + +G IFV K LD E D+Y + + A D + ++T V I I+D+NDN+P F + K + ++ I + +F A D D E +++IVY ++ Q +F I G+I L K+L
Sbjct: 848 YATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQT-----GVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFIFN--VIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQ-TSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVI-MEGLDYEQVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKES-EGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFV--KEPLDFEASDQYHLVLIASDGRH---NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKV----LFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKAL 1501 HSP 5 Score: 87.0409 bits (214), Expect = 7.790e-17 Identity = 154/614 (25.08%), Postives = 249/614 (40.55%), Query Frame = 3
Query: 558 DRGNNGSVVYAIKPSAVSN--KFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVAL---VYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDH--------GNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMG----VPSLTTTRPITVV--VKDENDNPPIF---YRQHESVSILENLPIGT------KVTRLKAIDKDIGVNAQIKYML---SPECLENFNIDPFSGMIT--TRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAV----------DKDIGQNAQMDYFLF----------NPSPLFEI--SRNGDIFVSQKRYLDRERVDRYSIEIGARDHG-NRPLTSSTTVEIIIDDINDNSP---TFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS 2222
D + G + Y+++ + K+ I PST H L L FD + + + N LTI+ID DVND+ P F + Y E I Q I +V A DKD I S + FS+ +G IS KV L F YR + A D G P ++ +S+ ++H+ N N ++Q V E+ Q + + ++ D D NG+ K++ LF+++ RH V+A + E ++ L +I D G PS T T T++ ++D N+N P F + + I+E GT + +++A D D N I Y L E + F ID +G++T V FDRE + V A D + V ++D NDN P+F R + E + R EAV D D NA++ Y L N FE+ R+G+I + + + + ++ + A D+G L SS V + + D +P T + KPG ++ ++E I +A+ + N+ ++Y + +
Sbjct: 562 DGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIH-----LTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRID--DVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN-----FSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEP-VSLSSSAMIHIRTENTNDESAVFLPTSQYTAFV-AEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMN---LFSIDEHTGLVKLRHG--VSAADLA---EAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIME----GTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERP-------SYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPM---KTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVEL--NKVILRCRAVSSGDSRNSDVIYKLTA 1137 HSP 6 Score: 85.5001 bits (210), Expect = 2.201e-16 Identity = 141/552 (25.54%), Postives = 223/552 (40.40%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPL---ARDPD--RGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLIL--IAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD--------GVISTKVALVY--VSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPT----SSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVT-RLKAIDKDIG---------VNAQIKYMLSPECLENFNIDPFSG--MITTRVSFDREVQSEYKVKATAYDHLIL-----RMNSSITIHVTILDENDNPPKFLRTFSFHIKENL----EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVS 1952
+ + + V D+NDN P F F + P H++ + ARD D N ++ Y I + + N + N G K+ ++S DREI E + I+ A D G P + I +TD+ND+AP F ++ Y + E+ G A+ A D D ++ + S+ D F V D GV+ K L Y V+ + + I D + A + V V + D ND+ P I A+ ++ + E+ + I + T +D+D G+ + + N +S + +R + + T + DRE D N+I + + + V ++D NDN P Y EN P+ T ++A D+D V+ KY + N N D +G IT FDRE K+ LIL R N + ++HV I D NDN R + H+ L E V+GRV D D + + P FE+S G I ++
Sbjct: 1529 YADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTG-----KIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTY--QLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRH---DAEAAVHVALVDRNDHAPHIHGATEHR-----VREDVPRGTSIGRYTATDRDAGDTAR--------FRINRQS----DPKRQFTIDQDGTLRVAHTLDRE--DIAVYNLIIEAYDNSNNIGRQMVAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRDTAEFGPPFTMEVSPSFKYSQYLNVIFNANGDGGNGSMTITPLQEFDREAPVPGKILEIP---LILADRAGRRNEA-SVHVIIGDLNDNTMHDGR-MTIHVNSYLGRLKETVIGRVYVDDADDWDLGDKTFSWKDSRPGFELSDKGSITMA 2046 HSP 7 Score: 65.4698 bits (158), Expect = 2.928e-10 Identity = 131/594 (22.05%), Postives = 233/594 (39.23%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPL------ARDPDRGNNGS-VVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDE---EFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRF---NTPESIVQGQAIGQVFATDKDISS------RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQV---ECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHL--ILRMNSSITIHVTILDENDNPPK-FLRTFSFHIKENLE-GVLGRVE--AVDKDIGQNAQMDYFLFNPSPLFEISR-------------NGDIFVSQKRYLDRER-VDRYSIEIG---ARDHGNRPLTSSTTVEIIIDDINDNS 2084
I + DVNDN P F++ + + E +V++P A D D+ S +VY ++ F + S ++++++ DR+ + ++ A D L +++++ D+ND++P F + + + N G V A D D + I+ + + + + + + + + +SS ++ I + A D G P+ + V + VTD+NDN P E + + E + + + D D V + +++Y + + ++ V P D +D L I SD + V + D ND+ P + E + E++P GT + R A D+D G A+ + + F ID G + + DRE + Y + AYD+ I R + V + D NDN P+ + +EN LG E A D+D + F SP F+ S+ NG + ++ + DRE V +EI A G R + +V +II D+NDN+
Sbjct: 1424 IHIEDVNDNAPQFEQQKYATTVIEE-----DVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRI--------GKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGS----VEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSD---GRHDAEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQ-DGTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQ----MVAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRDTAEFGPP--FTMEVSPSFKYSQYLNVIFNANGDGGNGSMTITPLQEFDREAPVPGKILEIPLILADRAGRR---NEASVHVIIGDLNDNT 1986 HSP 8 Score: 53.5286 bits (127), Expect = 1.215e-6 Identity = 68/297 (22.90%), Postives = 127/297 (42.76%), Query Frame = 3
Query: 255 NFQNFFRLNDNNVEM--LQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSG----PKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP 1127
N ++ FR++ N ++ ++SLDRE I++++ + I+ + + G F + I V D+NDN P F++ + + E +P V A D D + V+ + S S+ F ++ + S L++ Q D E + + + + + + + + D NDHAP + ++ E + +G +IG+ ATD+D T + S +F++ DG + L + Y + I A D+ N V V++ D+NDN P
Sbjct: 1597 NGESVFRIDQNTGKIFAMRSLDRE--ISSER-------------EFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDN-VFTYQLSEESDYF-YVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGAT-EHRVREDVPRGTSIGRYTATDRDAGD--TARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAV-YNLIIEAYDNSNN--IGRQMVAVYLQDVNDNGP 1870
BLAST of Protocadherin vs. Ensembl Fly
Match: ft (gene:FBgn0001075 transcript:FBtr0077478) HSP 1 Score: 242.662 bits (618), Expect = 1.011e-64 Identity = 202/672 (30.06%), Postives = 321/672 (47.77%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSV-VYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFD-GVISTKVAL-----VYVSSSFDYR---IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLV-LTENCQSNSYIAKVTVSDKDHGNNGQVECKL-DNNYL--FNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPS--PLFEISRNGDIFVSQ---KRYLDRERVDRYSIEIGARDHGN-RPLTSSTTVEIIIDDINDNSPTFIE-------PKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS--QTIFYINTSDGSIYL-NKSLQDEHILPD-KIIISARDSG 2333
++ I V DVNDN P F + +E++ + + L A D D G NG Y I V NKF L++ + G S L L+ + DRE +QL + A+D G+PP L + + I DVND+ P F+ S Y + E+ + G + V A+D D+ S++T + ++ +F+V + GVIST + V SS + + A D G+P + V V++ D ND+ PII ++ + EN + + +A V V D D G NG+ ++ N L F LE + + DRE + L ++ D G P+ TTT + + V D ND+ P+F + S + E P G+ V + A D+D GVNAQ+ Y +LS L+ F++DP +G+I T DRE++ ++ +A D + + V ILDEND P+F R + + E+ + ++ + A D D G N + F PS L+ + D Q +R LDRE++ +Y I + ARD G P +++ TV + + D+NDN P F + L E + + A D D G+NA I Y ++S + +F ++ G+I L + H P K+++SARD+G
Sbjct: 141 EVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYL-----AETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLH-------IVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVT-FALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAG 799 HSP 2 Score: 218.394 bits (555), Expect = 3.953e-57 Identity = 211/766 (27.55%), Postives = 340/766 (44.39%), Query Frame = 3
Query: 444 VADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVIST-----KVALVYVSSSFDYR----------------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVE---CKLDNNYLFNLESI--QNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPS-LTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP-ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDI-----FVSQKRYLDRERVDRYSIEIGARDHGN---RPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-----ETIQG--TKIFTAKAIDNDTGENAKIVYTIQS--QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDXXXXXXXXXXXXXFTCLLML--VTYFCASMIVQKRRQQ--RRMNIKDEIG 2585
+ADVND+ P FD ++ + E + + A D D G+NG + Y I F + G+ L + DRE + + L + +D G P +S + + I + D ND+APQF S++ F+ PE+ +G++ A D+DI +S + SSQ D +G I T + ALV VS + + + D+G P L V V VTD+NDN P A + + ++E ++I V D D G NG V K + FNL+S Q RR DRE ++ H L ++ D + L++ IT+VV DENDN P F + VS+LE P GT++ R +A D D GVN+Q+ + +S + F+ID +G + D E + Y + TA D +++++ +V ++D+NDNPP F T IKE L+ + V A D D G N ++ Y + P R+ I + R +DRE +D + + + A D R L++ V +I++DINDN+P F+ +N +I T +G T + A D D+ N + Y I S Q +F + + G I Q + + ++ + + D + + +S +++ I G + E +S LS + + IG +L T L + YF ++ R Q R +I ++G
Sbjct: 1039 IADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFP----DGY-----LFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAE--LSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYH----VTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRR-----------LDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVS------MNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLG 1772 HSP 3 Score: 206.068 bits (523), Expect = 3.437e-53 Identity = 201/658 (30.55%), Postives = 310/658 (47.11%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFN-QSSYRFNTPESIVQGQAIGQVFATD--KDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF---LRTFSFHIKENLEGVLGRVEAVDKDI-GQNAQMDYFLFNPSPLFEIS-RNGDIFVSQK-RYLDRERV----DRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLN-LSIETIQGTKIFTAKAID-NDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKT 2348
L I V+DVNDN+P FD T+N + E V A D D G N V Y I S + I+ T S KL++ D + +++ A D G L+S + + I + P F ++ F E + G+ I +V AT K + ++ + A + D V G++S + + Y I I A D P+L + + + ++VTD NDN P++E N VL E IA V SD+D G+NG V +L N++ E ++ E +L DRE + + D GVP +T T + + + D+NDNPP F R S+++ EN IG+ V R+ + D D+G NA Y S E F I+P SG IT DRE Q EY +K A D R + ITI TI D+NDN P+F +FSF + ++G++ A D+D G N+ + Y L PSP+F I G++F + R+ + V + Y++ + A D+G PL S V I I D ++N P F + ++L L + ++G +I A D D G N ++ Y++ + +IF + DG I L K +Q ++++ A D G+ P++
Sbjct: 2582 LTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTI--SGRDQHYFDINTKTGV---VSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTV-ILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAI---AGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAE---VLEEESPPQ-LIAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMRL--------DREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLF-SLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDG-AWRAETPITI--TIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKF---EQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTN-EMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQS 3210 HSP 4 Score: 194.512 bits (493), Expect = 1.180e-49 Identity = 207/696 (29.74%), Postives = 340/696 (48.85%), Query Frame = 3
Query: 369 NRDSQCILILELSGS-GPKFYQLPILVA--DVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDR-GNNGSVVYAIK-PSAVSNKFVLISPSTNQG-HDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDK-DISSRVT--IMMSPSASSQIMDKFSVA-FDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE-NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--FNIDPFSGMITTRVSFDREVQSEY--KVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPS--PLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEII--IDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDT-GENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
+R+ Q IL++ S G + PI + D NDN P F+ ++F E + V +A D D+ G N + Y+++ PS + + I P+T + +++ K Q + R + + L ++A D G PPL S + I+I D +++ P+F Q+ Y P+ V+GQ I +V A DK D+ + +M+ + SS FSV DG I T V + V + Y + + A D G P + + V++ VT N + P + S ++++ EN S I V +D D G NG + + Q+F + R +V +D ++++H LNI D+G L++ +T+++ D NDNPP+F + I EN P+GT V + A DKD NA I Y P + F ++ +G I++ VSFD E + Y ++KA D M S ++V +L N+ P+FL+ F F + E + +G V+A DKD G++ ++ Y L S F I N G I+V+ R+LDRE +R + + A+++G+ + ++I I D ND P FI K +S GTK+ T KAID D +N + Y+I + + F I+ G I L E ++I A D+G+ P+T ++++H+
Sbjct: 2975 DREQQDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSPMFS----IDPATGEVFSKKAVRFKHSQ-YVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSS----IFSVGRHDGWI-TLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSY----QVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGG-----NERQDFSVDERTGGIVIQQQLDYDL-IQEYH-LNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDS---SMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVA--RHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFI--KHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIEL 3641 HSP 5 Score: 191.045 bits (484), Expect = 1.263e-48 Identity = 191/702 (27.21%), Postives = 314/702 (44.73%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMG------------------------------------VPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--------FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDY--FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHG-NRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGE-NAKIVYTIQS--QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTS 2357
+ V D ND+ P F F + ++E+ + + A DPD GSV + + KF L+ PST KL + + DRE +++L + D G + TI++ +D ND+ P F + Y F+ PE+ +G +GQ+ A D D+ + S D FS ++ + ++ +++ DY + + A D+G P+L+ T TV +V D+NDN PI + S + + EN + + V+ D D GNNG +E + D + F ++S RR+ DRE + + L + D L++T +T+++KD ND P+F +E+ +I+EN+ I T V +KA+D D G N I Y++ E+ F+++P G + + DRE++S Y + TA D ++ + + ILDENDN P F + +S + EN + ++ +V A D D G N ++ Y L + + F IS + + V + L+ ER+ RYS+ + A D P + + I I DINDN PTF++ + + G + T A D DT N+++ Y ++ +F IN S G I L K L E + + A D+G P T T
Sbjct: 1811 VTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPD--TLGSVTFLLM-DGHDGKF-LLEPSTG-------KLILNDTLDRETKSKYELRIRVSD-GVQYTEAYATIQV--SDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYG-VVSDWANDVFS------LNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSE----VFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGIDSNGTIRTRRN----------LDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANET-AIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGV-VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTG 2475 HSP 6 Score: 184.111 bits (466), Expect = 2.238e-46 Identity = 169/585 (28.89%), Postives = 288/585 (49.23%), Query Frame = 3
Query: 771 IKIDITDVNDHAPQF---NQSSYRFNTPESIVQGQAI--GQVFATDKDISSRVTIMMSPSASSQIMDKFSVA-FDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYK----------------------VKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL-EGV-LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHG-NRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPP 2402
+ I I D+ND+AP F +S + PE+ GQ I +V D ++SR++ ++ + + Q F + GV+ + + S + ++A D+G+P L++ ++ V + D+ND+ P+ + S + L E + N+ + +D D G+NG++ ++ + +F + F + Y V AP DRE +D++ L + C D G PS ++ P+ + V DENDN P F + SI EN P T V +L A+D+DIG NA++ + LS + ++F ID +G I T FDRE + ++AT D+ I R+ + + V + D NDN P+FLR + I E EG + V D D G N + Y L N + F + S G + S R LDRE + + + + A+D PL+S+ ++ I++ D NDN+P F + +++ + GT++ +A D D G N+++V++I + + F+I++ GS+YL+K L E I + I+A D G P +T+ L+ + PP
Sbjct: 928 VNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQ----FRIGPVTGVLYLQRPIRAEPGSL-IHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETS----LPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGV-----FPD--GYLFVRAP---LDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQT-QDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQL--SLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSS--SEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCG-TPSLSTTVLYNVLVVDDNDNPP 1487 HSP 7 Score: 179.489 bits (454), Expect = 5.923e-45 Identity = 189/667 (28.34%), Postives = 305/667 (45.73%), Query Frame = 3
Query: 438 ILVADVNDNVPSF--DRLTF-NFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---------DNNYLFNLESIQNFENRRHYKLV-TAPTSSFDREVK-----DHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP-ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLI---LRMNSSITIHVTILDENDNPPKFLRTFS--FHIKENLEGV-LGRVEAVDKDIGQNAQMDYFL--FNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-------FYINTSDGSIYLNKSLQDEHILPDKIIISARD 2327
I + D+NDN P F DR + + EN+ E+ L RD D G N + Y++ + N+ I P T L + + E + L+A D G+PPL+S L++ + I DVNDH P F+ +SY + PE+ + ATD D+ R++ + + ++ F V DG + + L + Y + + D+G P+ ++ V++HV D NDN P +N + EN +++++ K+T D+D G N ++ L D F +++++ F+ K+ A S D ++ ++ L SD G+P L + V+V D NDN P F R V+I E GT +T + D D G+N + Y L+ FN+D +G ++ DRE Q + + A D + L N+SITI +LDENDN P+F ++ S ++ + G L R A D D G N+Q+ + + N F I S G +++ + LD E + Y++ I A D G L+++ +++ D NDN P F + + I T I T A D D+G N K+ Y I Q F INT G I+ + + E I ++ + A D
Sbjct: 930 IAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNP--NQQFRIGPVTG-------VLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERM---FGVFPDGYLFVRAPLDREERDY-YALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQF----TNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGF-IKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITI--VVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKP--LDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPL--KTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATD 1572 HSP 8 Score: 174.866 bits (442), Expect = 1.521e-43 Identity = 186/613 (30.34%), Postives = 280/613 (45.68%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFN-FKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD-GVISTKVALVYVSSSFDYRIPIIAVDSG--NPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGN-NGQVE--CKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILR-MNSSITIHVTILDENDNPPKF-LRTFSFHIKENL---EGVLGRVEAVDKDIGQNAQMDYFLFNPSP-LFEISRNGDIFVSQKRYLDRERVDR----YSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI 2216
++ IL+ DVND VP F ++ N I EN + V A D D G NG + Y +K A P + + +L+++ + DRE+ + L + A+D G PP ++ + I I D ND++P F+ Y + E+ G + QV ATD D + I S Q D FS++ D GV+ L Y S Y + + A D NP T+ + +++ DINDNRP S R++ + Y+ V D D N QV K ++ LF + + A DRE + + L ++ D G P LT T + V V+D NDN P+F Q ++ ENLP GT V +A DKD G+NA++++ L E + F+ID +G I+T + DRE S Y + A D I SS+ + +++ D NDN PKF T++ + E + E V G A+D D G+NA + Y + F+I+ + VS K L + Y+I I A D G + L+S + +I+ + PTF H +S + G I A G KI Y I
Sbjct: 2152 KVTILIKDVNDEVPVF--ISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMK-EARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHD-FSISEDTGVVRVAKNLNYERLS-RYSLTVRAEDCALENPA-GDTAELTINILDINDNRPTF--LDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGD---------IALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFG-ARALDLDDGENAVVHYTISGRDQHYFDINTKTGV-VSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVILRP-PELFPTFAY-MANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAI 2743 HSP 9 Score: 174.481 bits (441), Expect = 1.773e-43 Identity = 164/617 (26.58%), Postives = 286/617 (46.35%), Query Frame = 3
Query: 363 NYNRDSQCILILELS----GSGPKF--YQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISP-----STNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRF--------NTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECK-LDNNYL--FNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGV-PSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLE----NFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLI-LRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENL-----------EGVLGRVEAVDKDIGQNAQMDYFLFNPSP-LFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIII 2063
N +R+S+ L +S GS P+F Q+ + + DVNDN P FD +N + E + V +A D D G+N + Y + + ++F ++P ST + + + + S ++ + A+D G+P + +++ D NDH P S+RF E+ V G + V D D ++ R ++ + S + F + + + +V V+ D Y + ++A+D G P T T+ +++ V D+ND+ P+ E + + VL+E + S++A +T +D+D G N QV L N L F+++ + +VT T DRE++D +L+I D G P T+ + V++ DEND P F ++ ++V++ E+ P T V + A D D G N + + L+P F +D +G +TTR DRE S+Y++ A D +++ T+ + + D NDN P+F R + + + ++ E +L V A DKD G NA ++Y L + LF++ +R+G I + Y + + ARD G R VEI++
Sbjct: 227 NLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYL--AETEHQFT-VNPETGVISTTERVNCPQQTNVKSSASQK---SCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPII---SFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRI---VSGNELGHFRLEE----AADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSA----VLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGL-------IVT--TGPLDREIRDTVELSISARDGGPNPKFAYTQ-LKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVL 813 HSP 10 Score: 170.244 bits (430), Expect = 3.888e-42 Identity = 178/640 (27.81%), Postives = 275/640 (42.97%), Query Frame = 3
Query: 654 DSSLKLKILQS---FDREID-EEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYD--------------HLIL----------------------RMNSSITIHVTILDENDNPPKFLRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFL----------FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQ-GTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGII-PKTTTSSLHLNFIRSGKSKP 2399
D KL IL + DRE EE+++ + A LG P TS +++ + D ND PQF + + +N E + G I + A D D VT ++ + + + S +I S ++ RI V G A +T+ V+D NDN P+ E + + EN Q + ++ D D G N Q+ + +++ ++ F ++T T+ D E H+ L + D G PSL+TT + V D NDN PIF S + EN+PI T+V + A D D G N I+Y ++ +++ F ID +G I TR + DRE +S Y + TA D L L R++S++ + + I D ND P F+ I EN + V+ V+AVD D G+N +DY + +P P +G + V LDRE Y + I ARD G P ++ + + I I D NDNSP F P Q+ E G + A D D G N +I Y+I F I+ G + + K+L E + + + A D + P T+ L +N + ++P
Sbjct: 1766 DIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLEPSTG--KLILNDTLDRETKSKYELRI---RVSDGVQYTEAYATI--QVSDTNDNPPLFE----DTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDV-----FSLNPQTGMLTL-TARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGIDS-NGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDA--LDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVF---DPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRP 2382 HSP 11 Score: 169.474 bits (428), Expect = 6.057e-42 Identity = 194/726 (26.72%), Postives = 319/726 (43.94%), Query Frame = 3
Query: 246 TIDNFQNFFRLNDNNVEMLQSLDRENLI-TNQKCDTSKQYNYNRDSQC--ILILELSGSG---PKF---YQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLG-NPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKL-----VTAPTSSFDREVKDHHQLNIICSDMGVPS---LTTTRPITVVVKDENDNPPIFYRQHESV---SILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVS--FDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDI------GQNAQMDYFLFNPSP---------LFEISRNGDIFVSQKRYLDRERV-DRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDE 2288
TID F ++ L+ DRE L+ ++ + S + R S ++LE + S P+ ++ ++V DVNDN P F R ++ I+E + + +D D G NG V Y++ + +F L S ++ +L + + DRE E LI++AKD PL+S+ +I I + D ND+AP+F QSS + E+ G + + A+D D ++ S SA ++ D F I + +Y+ DY + I A D G P+L+ T V V D NDN PI + + + E + I VT D D G NG+V +Y + + Q RH+ + V DRE D +L ++ +D PS L+T + +TV+V+D NDN P+F + ++ + T V ++ A D D N + Y + E F + +G+IT F +EV+ + +K+T D + S +++TI+ + F + L G + E + I +A+++YF+ N + LF+I I +S LDRE + Y +E+ A G +P TS T V + + D ND+ P F++ P + N+S + G I T +A D DT + + F + S G + LN +L E
Sbjct: 1200 TIDTRNGF-------IKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDS--------ATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNR-RDTFH------IDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQ----IKEGIPLKTPIVTVTADDPDSGLNGKV------SYAISKQEPQ-LPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKST--DEAVQSERRSSEVYITIITPGSGGSES-SVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGI-LSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLD-TPFVY-NVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRE 1886 HSP 12 Score: 169.088 bits (427), Expect = 9.119e-42 Identity = 196/729 (26.89%), Postives = 309/729 (42.39%), Query Frame = 3
Query: 351 SKQYNYNRDSQCILILELSGSGPKFYQLPILV----ADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNP------------------------------------PLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAF-----DGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPS-LTTTRPITVVVKDENDNPPIFYRQHESVSILENL--PIGTKVTRLKAIDKDI-GVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENLEGVLGRV--EAVDKDIGQNAQMDYFLFNPS-PLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHG-NRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETI-QGTKIFTAKAIDNDTGENAKIVYTI--QSQTIFYINTSDG----SIYLNKSLQDEHILPDKIIISARDSG 2333
+ + +Y ILI++ +G I V D+NDN P FD ++++ ++ EN P EV A+D D GNNG + Y+I V ++F G DS+ ++ ++ DRE + L + A+D + L+S++ + I I DVND P F S+ E++ + V A D D + +M + + + F DG + AL S Y + I A D G P + S +L+ + D NDN P+ + + + + EN + + +V+ +D D G NG++ + D N+ F++ V + + E + L + D + + T +T+ + D NDN P F ++EN P G V + A D D +N+Q++Y L + F I+ SG I DRE QSEY + A D + + + V + D NDN P F L+++ ++ENL + A DKD G NA++ + L F I S G+I S LDRE Y + + A+D P SS + I + D+NDN P F N+++ E I +G +F A+A+D D GENA + YTI + Q F INT G + L + L I+ISA D G
Sbjct: 1982 TARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEF---------GIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVF-ISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRS-SYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSAS----VAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTG---------VVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEI--STATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKF----DSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQG 2680 HSP 13 Score: 156.377 bits (394), Expect = 6.359e-38 Identity = 174/660 (26.36%), Postives = 299/660 (45.30%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI---KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPP---LTSSLTIKIDITDVNDHAPQFNQSSYRFNTPE-SIVQGQ--AIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDN----------NYLFNLESIQNFENRRHYKL-VTAPTSSFDREVK-DHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEG--VLGRVEAVDKDIGQNAQMDYFLFN--PSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQ-GTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARD 2327
+LV D NDN P F +I E P + A DPD G NG V YAI +P + I+ T H L+ DRE + F+L ++A D P L++ + + + D+ND+AP F + P+ S +G A+ QV A D D SS + + Q + F + + I T Y++ + + D + +S V ++T I E + R L+ + N I ++ H + ++E + N + LF++++ KL + + + DRE + +++ + +G T+ + V V D+ND+PP F ++ E+L IG ++ L+A D D + ++L F ++P +G + + DRE +S+Y+++ D + + TI V+ D NDNPP F T +SF I EN + +G++ A D D+GQNAQ+ Y + + + +F ++ + R LD E V Y + + A+D+G L+++ TV + D+NDN+P F P + + E + T++ T A D D+G N I Y+I + + F I+ S+G+I ++L EH + ++ARD
Sbjct: 1477 VLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIH-------TLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQEL--FKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSERRSSEV--YITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDA----------KLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPD--TLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDG-VQYTEAYATIQVS--DTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIF---DPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGID-SNGTIRTRRNLDREHRSTYTLTVTARD 2105 HSP 14 Score: 147.517 bits (371), Expect = 3.615e-35 Identity = 167/624 (26.76%), Postives = 263/624 (42.15%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSA------VSNKFV----------LISPSTN---QGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSG-NPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSF------DREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS---PECLE--NFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLI---LRMNSSITIHVTILDENDNPPKFLRTFS------FHIKENLEGVLGRVEAVDKDIGQNAQMDY-FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQ----GTKIFTAKA 2171
I V D NDN P F TF F I EN+PA V A D D G N + + + N F+ L+ S N G D SL+ + ++ L D G P L + +K+ +TDVND+AP+F ++ Y E +G I VF D D + S + ++ +F++ + G +S L S + I ++A D+ L++ +++ + V D NDN P +SS + + E + + + + SD D G N QV +F++ + NRR + + T S D E + LNI SD G PSL+TT V+V D+NDNPPIF I E +P+ T + + A D D G+N ++ Y +S P+ + +F I+ +G+I T DRE +++ A D ++++ + V + D NDN P F+ + F + + +V A D D N + Y + P LF++ RN I ++ V RY + + + D + S+ V I I P+ Q LS + GT I T A
Sbjct: 1141 IHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNY-------MLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNE-AGQFNLDSATGQLSLGRRLDRESQEIHHLI-VVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSS----EVSVLETSPTGTELMRFRASDADQGVNSQV--------VFSISA----GNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEV-RYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTA 1738 HSP 15 Score: 134.42 bits (337), Expect = 3.659e-31 Identity = 181/682 (26.54%), Postives = 297/682 (43.55%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAE---NSPAHNEVE--LPLARDPDRGNNGSVVYAIKPSAVSNK--------FVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVT------APTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLE-NFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTI-LDENDNPPKFLRTFSFHIKENLEGV---LGRVEAVDKDI-GQNAQMDYFLFNPS--PLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAK-IVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
Y L +L D N P + N I + N P + E PL +D RG V+A + F L S + HD + L ++ + ++L++ A D G PP + + I +T N P+F+ +SY+ PE+ G I V ATD D + S S ++ D FSV G I + L Y +Y + I D G L++ + + + +TD+NDN P+ +++ + EN +++ + +DKD N + +Y F L S + RH+ ++ + SFD E + + L I + S+ + + V V N+ P F + + E +GT+V ++A DKD G + ++ Y+L + F ID +G+I DRE Q+ + A ++ +R N + V I + + ++PP+F++ + V + V+A+DKD+ QN Q Y + N + F+I + G+I + + LDRE Y++ IGA D G P T S TV I ++D+NDN PTF P+ G + +S GT I T A D D N Y + + ++ ++ + G + S E + II DSG K S HL
Sbjct: 3089 MYALTVLATD-NGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITL--VKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQD-FSVDERTGGIVIQQQLDY-DLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVF----NHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAII------HYAF-LPSGPD----RHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPD-SSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDPPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASR--LDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFT-PE-GLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSG---KPKQKSQHL 3742 HSP 16 Score: 115.161 bits (287), Expect = 2.813e-25 Identity = 150/573 (26.18%), Postives = 238/573 (41.54%), Query Frame = 3
Query: 165 ECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRE--NLITNQKCDTS--KQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNP--PLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLV-------LTENCQSNSYIAKVTVSDKD-HGNNGQVECKLDNNYLFNLESIQNFE-NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQ--IKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENL 1826
+ +V EN P+ I V T D T N + ++ N S+D ++ Q+ D ++Y+ N Q + LS L I++ DVNDN P F+ ++ I EN P V A D D N + YA PS F +++ S + SFD E + L + AK NP + S + + + VN+ PQF Q + F+ E+ G +G V ATDKD RV ++ S++ + I T L+YV+ D V T+ A + + D ++ + II I N + ++E + + V DKD N Q + N NL+ Q+F+ + + ++ TA S DRE + L I D G+P T + + + ++D NDN P F + + I EN P GT + L A D D+ N ++ + ++D SG++ + SFDRE+ + D + S + +T+LD+NDNP T S HI +L
Sbjct: 3235 QVIVPENEPVGSTILTVGATDDD----TGPNGMLRYSISGGNERQDFSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLS----SVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNG-------TISSAVSFDYEERRIYTLQIKAK---NPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFR---------IDTNTGLIYVARHLDRETQNRVV----LTVMAKNYGSIRGNDTDEAQVIISIQDGNDPPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIING---NLK--QSFKIDVQTGEISTA--SRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDNPST---TRSLHIAVSL 3766 HSP 17 Score: 100.138 bits (248), Expect = 9.458e-21 Identity = 114/430 (26.51%), Postives = 183/430 (42.56%), Query Frame = 3
Query: 312 DRENLITNQKCDT-SKQYNYNRDSQCILILELSGSGP-----KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGN--PPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD-GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNL--ESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILE-NLPIGTKVTRLKAIDKDI 1565
DR I NQ T S +++ + + I L++ P + L + V VN+ P F + F+F ++E S V A D D G +G V Y + S+ F + TN G + + + DRE L ++AK+ G+ T + I I D ND P+F + Y E+ G + V A DKD+ ++ + + F + G IST L +S Y + I A+D+G P T ++TV + + D+NDN P N ++EN + + I + SD D NG + + L +++ + V T+SFDRE+ + I D G P + +T+ V D+NDNP H +VS+ +LP K+ ++ D DI
Sbjct: 3379 DRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRI---DTNTG-----LIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETS-TYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNG----YISENEPAGTSIMTLIASDPDLPRNG-------GPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDNPSTTRSLHIAVSLFNGDLPSNVKLADVRPNDIDI 3787 HSP 18 Score: 81.2629 bits (199), Expect = 5.622e-15 Identity = 78/269 (29.00%), Postives = 118/269 (43.87%), Query Frame = 3
Query: 1503 ILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSS--ITIHVTILDENDNPPKFLR---TFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLF---NPSPLFEI----SRNGD---IFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSI 2261
+LE P GT V I + Y + E F +DP +G + T V DRE ++ YD ++L + I + + +LD NDN P+F SF L A D D+G+N D + N F + + +GD + + LDRE Y + I ARD G+ P V + I D+NDN P F +++L+ + GT + T A DND G+N+KI Y + +++ F +N G I
Sbjct: 73 VLEGQPRGTTVGF-------IPTKPKFSYRFN-EPPREFTLDPVTGEVKTNVVLDREGMRDH------YDLVVLSSQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSD--YNVSLNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQFTVNPETGVI 325
BLAST of Protocadherin vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045) HSP 1 Score: 232.646 bits (592), Expect = 1.391e-61 Identity = 208/712 (29.21%), Postives = 331/712 (46.49%), Query Frame = 3
Query: 351 SKQYNYNRDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFS---VAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECK-LDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPP-IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML----SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDK--DIGQNAQMDYF-------LFNP------SPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARD--HGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI------------QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARD 2327
+K ++ SQ +L ++ + P Y Q+ I V DVNDN P F+ + E++ + A D D G++G V Y++ + F + + S GH L + Q D E + LI+ A D G P L+++LTI +D+ DVND+ P F + Y N ES I QV A+D D +R+T + + + + S V+ I +Y+ + D Y++ ++A D+G P A + V+V V D NDN P + + EN + S + VT SD D G N + L N F + + + R DRE+++ + L + D G P + P+ + V D NDN P I Q + VS+ E P GT+V R++A+D+D G NA I Y + + F+IDP SG+I TRV D E +S Y++ A D + + V +LD NDN P F + F ++E+ L V+G + +++ D+ +N+ + F NP F+I R+ G++ V+ R LDRE + +EI A D N P +S+ TV+I + D+NDN+P + P+ L +S T GT I A D DTG N + Y + Q+ ++F +++ G++ L L E + +I+ A D
Sbjct: 887 AKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARS---GH-----LILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQ----KSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTRE---------PLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVA--RLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEW--PQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALD 1573 HSP 2 Score: 229.565 bits (584), Expect = 1.295e-60 Identity = 214/757 (28.27%), Postives = 352/757 (46.50%), Query Frame = 3
Query: 249 IDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISS----RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDY------RIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGN---NGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS--PEC-LENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF---SFHIKENLEGVLGRVEAVDKDIGQNAQMDYFL---FNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIET---IQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIY------LNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNK 2414
ID+ + + + VE ++DR K ++ R S ++ + LSG + ++ + V D NDN P+F + + + + EN+P + L ARD D + Y I V++ F L S G L L+I DRE + L++ A D G PPL +T+ I I DVND+ P FNQS Y PE+ G ++ QV+A+D D I S Q+ I + +Y++ + D+ + ++A D G L T+ V + VTD+NDN+P I + + + ++E+ Q ++A+++V D D N V + + ++ +N + +V P DRE+ ++ L+++ +D G P L ++ I + + D NDNPP F + +++E GT V ++ A D+D G+N+ + Y L+ PE + F IDP +G+ITTR D E + ++ A D + ++S+ T+ VTI D NDN P F ++F S E + + +V A D D G NA ++Y + F FE+ S +G+I ++ + LD ER Y + A D G L+++ +++ + D+NDN P F + L S + T I A D D G ++ Y I IF I+ S G I+ L+ Q H+L ISA D G + + + L+ I +PP K
Sbjct: 105 IDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRE---TRASYSLVAIPLSG---RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGV-LYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFR---------IDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHF----ALTTRDNSIYLVIVHLP---LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGE--LDFERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN----ISATDGGNLRSNADAVVFLSII-DAMQRPPIFEK 829 HSP 3 Score: 214.927 bits (546), Expect = 4.488e-56 Identity = 190/687 (27.66%), Postives = 310/687 (45.12%), Query Frame = 3
Query: 444 VADVNDNVPSFDRLTFNFKIAENSPAHNE-----VELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV--ISTKVALVYVSSSFDYRIPI-----IAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML-------------SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI------QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
+ DVNDN P F + + E+ A ++ + +A DPD GN G V Y I N+ + + G ++ +L + + L + A D GN + + + I D P F ++ Y + E I +G +G V A D++ R + S +S DG I T + ++ D+ I G P + + V + V D+NDN P E + R+ + E+ + + + DKD G++GQV L L +I + R L+ + D E H L + +D GVPSL+T I V V+D NDNPP+F + SV++ E+ I ++ ++ A D D G NA+I Y + S + ++F I P SG I R DRE + Y++ A D+ ++ + V +LD NDN PKF ++ + F I+ENL V+G V A D D+G+NA + Y L + F++ G+I S + LDRE + Y + + ARD G ++ V I + D+NDN+P +P+ +++ E GT++ +A+D D G+NA I Y+I +F I+ + G I L E ++ ++A D G P+ T L + + ++P
Sbjct: 705 LTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI---VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPM---HMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYS---------IYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMV----RISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAI----DARSGHLIL--SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEI--STREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQE-DVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRP 1363 HSP 4 Score: 203.756 bits (517), Expect = 1.701e-52 Identity = 211/747 (28.25%), Postives = 332/747 (44.44%), Query Frame = 3
Query: 351 SKQYNYNRDSQCILILELSGSG-PKF-YQLPILV--ADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGH----DSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS--PSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSS-------FDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGV----------NAQIKYMLSP---ECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILR--MNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDI----------FVSQKRYLDRERVDRYSIEIGARDHGN---RPLTSSTTVEIIIDDINDNSPTFIEP--KPGQHLNLSIE--TIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDK-----IIISARDSGIIPKTTTSSLHLNFIRSGKSKPPP 2405
S+ +Y + LI+ + G P L ILV DVNDN P F++ ++ ++E+ + ++ A D D GNN + Y I + V N IS S H +S + + DRE + +QL ++A D G P + + + + D ND+ P+F +S Y F E++ +G +G V A+D D+ I S P SS F V G IST+ L Y + + A D G P +A V +HV+D+NDN P EIA Q + + + E + + +V D+DHG N + + ++ ++ H PTS D E + ++L + SD G P T R + V V D NDN P F + E+ +G V + I++ V + ++ Y L+P + +E F+ID SG + DREVQSE++++ A D +S+IT+ + + D NDN P++ + + E + ++ A D D G N + Y L P S+ + +S + LD E V Y + + A D + L +S TV + I D ND++P F+ P G+ +L I T G + A+D D+G+N ++ Y I + F IN+ G I L KSL +K +II A+D G P+ SSL+L+ I G PP
Sbjct: 991 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSS-----FQVHPVTGEISTREPLDRELREL-YDLVVEARDQGTPVRSARVPVRIHVSDVNDNAP--EIADP-QEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSI----------VKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQ-PEPKKSSLNLHLIVQGSHNNPP 1717 HSP 5 Score: 180.259 bits (456), Expect = 2.971e-45 Identity = 183/669 (27.35%), Postives = 294/669 (43.95%), Query Frame = 3
Query: 384 CILILELSGSGP---KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI-KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDG-----VISTK---VALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP--ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENLEGV-------LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDE 2288
+LI L G P F + I + DVNDN P F++ + + EN+ V A D D NG V YAI + + + I P T + I ++ D E E +L+++AKD G PL ++ + I +TDVND+ P N + I + G+ A R+++ P + ++ + +V +G ++T+ + LV V D Y + ++A D G P L A+ ++ + +TD+NDN P E + N + E + + +V D+D G N + L + Q F+ L+T S D E + QL ++ D GVP L++T + V + D NDN PIF + +VS+ EN P+G + ++ A D D GVNA + Y + + L F + SG I D E +S Y+ A D L + I + +T D NDN P F R + ++E+ + + V A D D G Q+ Y + N + +F I R+ G+IFV + L + + I A D GN + V + I D P F + + ++ I +GT + + A D + + Y+I S F I T+ G+I + K L E
Sbjct: 253 SLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTG-------AIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVA-------RISVH-DPDSKTEYAN-VNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHAN----VMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETH---AQWFQIDPQTGLITT-RSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLT--DVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIP--RGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHE 893 HSP 6 Score: 173.711 bits (439), Expect = 2.641e-43 Identity = 186/704 (26.42%), Postives = 308/704 (43.75%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHA-----PQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS--PSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLV--LTENCQSNSYIAKVTVSDK--DHGNNGQVECKLDNNYLFNLESIQN------FENRRHYK-LVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVV--VKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML----------SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDH---LILRMNSSITIHVTILDENDNPPKFL-------RTFSFHIKE--NLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRY----LDRERVDRYSIEIGARDHGN-RPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETI-QGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSI----YLNKSLQDEHILP 2300
RD + +L P + ++ + V D NDN P F + + F+I EN + V + A D D G N ++ Y++ P +++ F Q H + ++ + DRE+ E + L++ A+D G P ++ + ++I ++DVND+A PQ + S R P G + +V A D+D +I S S FS+ GVI T+V L + S YR+ + A D GNP + V V D+NDNRP +S LV + E+ + ++ ++ D N E D + L + F+ RH LV A DREV+ +L I D + + ITV V D NDN P + + + + E P+GT + A D D G N ++Y L + + F +D +G ++ + D E EY + A D + R+ +S+T+ + ILD ND+ P F+ +T S I + + V+ + AVD+D G N Q+ Y + N F I+ I K D E+ R+++ IGA+DHG P SS + +I+ ++N P F++ + +E + G+ + A ENA + Y I + +F+++ G I ++ Q ++LP
Sbjct: 1116 RDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP--INSSF--------QVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPP----GTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSI-YRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSS------LVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVA--RLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQ---AVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLP 1793 HSP 7 Score: 166.007 bits (419), Expect = 7.233e-41 Identity = 190/782 (24.30%), Postives = 345/782 (44.12%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDN-NVEMLQSLDRENLITNQKCDTS------KQYNYNRDSQCILILELSGSG-PKFYQ----LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSS-LTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSA-SSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDH-----------GNNGQV--------ECKLDNNYL-----FNLESIQNFENRR--HY-------------------KLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDP-FSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKE--NLEGVLGRVEAVDKD--------IGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL--SIETIQGT-----KIFTAKAIDNDT-GENAKIVYTIQ-SQTIFYINTSDGSIYLNKS 2276
V +NSP F + P+ P + + L++ N +++ S+ NL D+S + + + S+ L ++ S G PK Q + I V D NDN P F + + E++P V A D D G N +VY++ + +F + S + + DRE+ + +++A D G + S+ + ++I++ D+ND+ P F + Y P I GQ + +V A D D+ + I+ S +A +S + KF + G +S +L S + ++A D GNP ++ + + + + P++ N+ R++L EN S + + +V D GN + E +++ +L F+ S+ R HY + +T+ + + + ++ ++ P L + + + ++DENDN P F ++ ++ E GT V ++ A D D G NA+++Y + +N F I+P FSG++ T + DRE++ YK+K A D + +M + TI V I+D NDN P F + E L V+ + A D D +G + +D + N S +F + R V KR LD E Y +++ A D + + T + + ++D NDN+P F+ +P + + +I I + + T A D D+ G N+K++Y I+ +Q F ++ S+G + +N S
Sbjct: 1840 VNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA-NETQWQFAI--------DGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKL-LHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRF--QNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVD--IENMS-IFALDRYSGKLV-LKRRLDYELQQEYELDVIASDAAHE---ARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMS 2602 HSP 8 Score: 163.696 bits (413), Expect = 3.296e-40 Identity = 180/662 (27.19%), Postives = 288/662 (43.50%), Query Frame = 3
Query: 444 VADVNDNVPSF------DRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNP-PLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIM-DKFSVAFD-GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATS-----------------------TVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVP-SLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSS-ITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDY------------FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNK 2273
+ D ND+ P F T + I++ + V +A D D G+NG + Y I +F + ++ G +K + D E F LI+ AKD G P P SSL + + + +++ P+F Q+ YR E++ G + QV T K + +S + + D F V + G+I+T+ S + Y +P+ D+ + ++S T+ + V D+NDN P S L + EN + I V SD D G N + + L N SI + +L P DRE + L I SD G P S IT+ V+D+NDN P F + S+ E+ P+GT V ++ A+D D+GVNA++ Y L+ E F ID SG+ITT DRE+Q+ Y A D + S+ + + + +LD NDN P F R + + ++ L +V+A+D D+G NA++ Y F NPS G + SQ L E +E+ ARD GN P +S +E++I + +P + L + GT++ A+ +D G K+ ++ + I +++ G I +NK
Sbjct: 1592 ILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRI---NSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQV--TAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQA-SYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYG---LSVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSG----ELSARP---LDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPS-------TGALSASQS--LASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSFGAGNEDGILSLDSLSGEIRVNK 2226 HSP 9 Score: 132.88 bits (333), Expect = 1.029e-30 Identity = 174/687 (25.33%), Postives = 284/687 (41.34%), Query Frame = 3
Query: 438 ILVADVNDNVPSF-DRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDK--DISS----------RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVD---SGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNY-LFNLESIQNFENRRHYKLVTAPT--SSFDREVKDHHQLNIICSDMG---VPSLTTTRPITVVVKDENDNPPIFYR------QHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSF-----DREVQSEYKVKATAYDHLILR-MNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDI--GQNAQMDYFLFNPSP----LFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSST-----------------------TVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEH 2291
I V+DVNDN P D + E P EV A D D G N S+ Y+I S+ L S G ++ +++ D E ++L + A D GNPP + +++++ D+ND+ P F SS F E G +G + ++ D+ RVT ++P I F + L+ ++R+ I A+D S NP +A TV + V D+NDN P L ++E + I T +D D G NG ++ +L + N Q R L A + + D E + L + D L T+ + + + D ND+ P F + S+ I + IG V + A+D+D G N Q+ Y ++ E F I+ +G+I S D E + + A DH SS+ +H+ + ++NPP+FL+ + I EN+ ++ K + +NA + Y + P+ LF + I ++ ++ DRE Y + + RD + SS+ T+ I + D+NDNSP F +PG LS+ E + I T A D D G NA ++Y+I + F I++S G + +++H
Sbjct: 1244 IHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSG---VIRTRVV--LDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAI-TVKIEVADVNDNAP----EWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEI--PAGVANDLFHVDWQRGIITTRGQF-DRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEF---RPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQH 1914 HSP 10 Score: 113.62 bits (283), Expect = 6.964e-25 Identity = 153/585 (26.15%), Postives = 264/585 (45.13%), Query Frame = 3
Query: 660 SLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQF--NQSSYRF-------NTPESIVQGQAIGQVFATDKDI---SSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALV--YVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPT----SSFDREVKDHHQLNIICSDMGVP------SLTTTRPITVVVKDENDNPPIFYRQHE-SVSILENLPIGTKVTRLKAIDKDI--GVNAQIKYMLSPECLEN-FNIDPFSGM--ITTRVSFDREVQSEYKVKATAYD-HLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGV---LGRVEAVDKDIGQNAQMDYFLFNPSP-------LFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS-QTIFYINTSDGSIYLNKSLQ 2282
S KL + + D E+ +E++L +IA D + T LT++++ D ND+AP F Q F ES+ + V ATD D +S+V ++ P+ + FSV +GV+S ++ + VSSS DY + IIA D+G P L +++ + V D R N Y A+++ + G V +L + L +I ++L+ + DRE D ++L ++ S P + ++ + + + D NDN PIF R + I E P+ + +L+AID D N+++ Y ++ E+ F ID +G+ + R+ +D +S Y++ A D H + S + + DENDN PKF T H E V + R A D D G Q++Y + P+P +F + S +G V+ D E+ RY +E+ A D G + +S V + I+ ++ +P F E L ++ QG + A D+D+G + ++VY + + + F +N S G++ + + L+
Sbjct: 2484 SGKLVLKRRLDYELQQEYELDVIASDAAHEARTV-LTVRVN--DENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA-----QEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGR-----------------SQFLQNQYRAQIS----EAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKS-YELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSI-GPAPSDESSWKMFRVDSESG--LVTSAFVFDYEQRQRYDMELLASDMGGK--KASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLK 3033 HSP 11 Score: 109.383 bits (272), Expect = 1.538e-23 Identity = 154/639 (24.10%), Postives = 258/639 (40.38%), Query Frame = 3
Query: 306 SLDR--ENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAH-------NEVELPLARDPD-----------RGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNP------TLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLD-----NNYLFNLESIQNF---ENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP-----ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENL---EG-VLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQKRYLDRERVDRY-------SIEIGARDHGNRPLTSSTTVEIIID 2066
+LDR L+ ++ D Q Y D ++ + L + V D NDN P F +A+ PA+ +E+ L+ D D GNN V+Y I+P+ + + PS S+ + LQ + F + +IAKD G P L SS +++ D QF Q+ YR E+ G + Q+ D S + SA + K V + + L Y++ ++ P ++ +V++ + D NDN PI + ++ + ++E IA++ D D N E D + ++F ++ + NR Y R HHQ +CS +P + + DENDN P F + EN P+G+ V R A D D G Q+ Y + P + F +D SG++T+ FD E + Y ++ A D + +S+ + V I ++ P+F RT+ F + + +G V+G+V A D D G + ++ Y L P F+++R +G + + +K LD + S+ I A + L+S VEI +D
Sbjct: 2479 ALDRYSGKLVLKRRLDYELQQEYELD-----VIASDAAHEARTVLTVRVNDENDNAPVF--------LAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA---QEGFSVHPSNGV---VSVNMSRLQPAVSSSGDYF-VRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDL--------YKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAE---ISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQ-RPLCS---------LQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASD--MGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLKLDGDGDGNLYMDGRDISLVISASSGRHNSLSSMAVVEIALD 3074 HSP 12 Score: 104.375 bits (259), Expect = 5.262e-22 Identity = 170/649 (26.19%), Postives = 280/649 (43.14%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVL------TENCQSNSYIAKVTVSDKD-HGNNGQVECKLD-NNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLK--AIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVK-ATAYDH-----LILRMNSSITIHVTILDENDNPPKFLRTFSFHIK----ENLEGVLGRVEAVDKDIGQ--NAQMDYFLF--NPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARD-HGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-------QSQTIFYINTSDGSI 2261
+ +L I + D NDN P F + F ++E + V A D D G+N + Y I N FV I P+ + ++ I+ DREI + ++L +IA D G P +T + TI++ I DVND+ P F ++ E+ G I + A D D +T + ++ I + A D G + K L Y +Y + +IA D+ + A + + V V D NDN P+ +A +L +E+ + + V +D D GNN +V ++ F++ + +L A +SS D V+ II D G P+L ++ + V D F + I E P+G+ V +L A+D+ + + A + + E L+ S I DRE YK++ ++ H L +S I++ +TILD NDN P F R+ + + L + +++A+D D N+++ Y + N +F I G +FV+ + D Y + I A D H RPL S + + D NDN P F P L+ G+ +F A A D D G ++ Y+I S +F +++ G +
Sbjct: 2305 YAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFV-IEPAFS----GIVRTNIV--LDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQ-EYELDVIASDAAH---EARTVLTVRVNDENDNAPVF-LAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVR------IIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEES-AFELLQ-------SKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYD-SGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKF--PLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLV 2923
BLAST of Protocadherin vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249) HSP 1 Score: 232.646 bits (592), Expect = 1.391e-61 Identity = 208/712 (29.21%), Postives = 331/712 (46.49%), Query Frame = 3
Query: 351 SKQYNYNRDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFS---VAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECK-LDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPP-IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML----SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDK--DIGQNAQMDYF-------LFNP------SPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARD--HGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI------------QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARD 2327
+K ++ SQ +L ++ + P Y Q+ I V DVNDN P F+ + E++ + A D D G++G V Y++ + F + + S GH L + Q D E + LI+ A D G P L+++LTI +D+ DVND+ P F + Y N ES I QV A+D D +R+T + + + + S V+ I +Y+ + D Y++ ++A D+G P A + V+V V D NDN P + + EN + S + VT SD D G N + L N F + + + R DRE+++ + L + D G P + P+ + V D NDN P I Q + VS+ E P GT+V R++A+D+D G NA I Y + + F+IDP SG+I TRV D E +S Y++ A D + + V +LD NDN P F + F ++E+ L V+G + +++ D+ +N+ + F NP F+I R+ G++ V+ R LDRE + +EI A D N P +S+ TV+I + D+NDN+P + P+ L +S T GT I A D DTG N + Y + Q+ ++F +++ G++ L L E + +I+ A D
Sbjct: 887 AKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARS---GH-----LILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQ----KSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTRE---------PLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVA--RLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEW--PQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALD 1573 HSP 2 Score: 229.565 bits (584), Expect = 1.295e-60 Identity = 214/757 (28.27%), Postives = 352/757 (46.50%), Query Frame = 3
Query: 249 IDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISS----RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDY------RIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGN---NGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS--PEC-LENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF---SFHIKENLEGVLGRVEAVDKDIGQNAQMDYFL---FNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIET---IQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIY------LNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNK 2414
ID+ + + + VE ++DR K ++ R S ++ + LSG + ++ + V D NDN P+F + + + + EN+P + L ARD D + Y I V++ F L S G L L+I DRE + L++ A D G PPL +T+ I I DVND+ P FNQS Y PE+ G ++ QV+A+D D I S Q+ I + +Y++ + D+ + ++A D G L T+ V + VTD+NDN+P I + + + ++E+ Q ++A+++V D D N V + + ++ +N + +V P DRE+ ++ L+++ +D G P L ++ I + + D NDNPP F + +++E GT V ++ A D+D G+N+ + Y L+ PE + F IDP +G+ITTR D E + ++ A D + ++S+ T+ VTI D NDN P F ++F S E + + +V A D D G NA ++Y + F FE+ S +G+I ++ + LD ER Y + A D G L+++ +++ + D+NDN P F + L S + T I A D D G ++ Y I IF I+ S G I+ L+ Q H+L ISA D G + + + L+ I +PP K
Sbjct: 105 IDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRE---TRASYSLVAIPLSG---RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGV-LYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFR---------IDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHF----ALTTRDNSIYLVIVHLP---LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGE--LDFERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN----ISATDGGNLRSNADAVVFLSII-DAMQRPPIFEK 829 HSP 3 Score: 214.927 bits (546), Expect = 4.488e-56 Identity = 190/687 (27.66%), Postives = 310/687 (45.12%), Query Frame = 3
Query: 444 VADVNDNVPSFDRLTFNFKIAENSPAHNE-----VELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV--ISTKVALVYVSSSFDYRIPI-----IAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML-------------SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI------QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
+ DVNDN P F + + E+ A ++ + +A DPD GN G V Y I N+ + + G ++ +L + + L + A D GN + + + I D P F ++ Y + E I +G +G V A D++ R + S +S DG I T + ++ D+ I G P + + V + V D+NDN P E + R+ + E+ + + + DKD G++GQV L L +I + R L+ + D E H L + +D GVPSL+T I V V+D NDNPP+F + SV++ E+ I ++ ++ A D D G NA+I Y + S + ++F I P SG I R DRE + Y++ A D+ ++ + V +LD NDN PKF ++ + F I+ENL V+G V A D D+G+NA + Y L + F++ G+I S + LDRE + Y + + ARD G ++ V I + D+NDN+P +P+ +++ E GT++ +A+D D G+NA I Y+I +F I+ + G I L E ++ ++A D G P+ T L + + ++P
Sbjct: 705 LTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI---VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPM---HMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYS---------IYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMV----RISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAI----DARSGHLIL--SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEI--STREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQE-DVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRP 1363 HSP 4 Score: 203.756 bits (517), Expect = 1.701e-52 Identity = 211/747 (28.25%), Postives = 332/747 (44.44%), Query Frame = 3
Query: 351 SKQYNYNRDSQCILILELSGSG-PKF-YQLPILV--ADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGH----DSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS--PSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSS-------FDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGV----------NAQIKYMLSP---ECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILR--MNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDI----------FVSQKRYLDRERVDRYSIEIGARDHGN---RPLTSSTTVEIIIDDINDNSPTFIEP--KPGQHLNLSIE--TIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDK-----IIISARDSGIIPKTTTSSLHLNFIRSGKSKPPP 2405
S+ +Y + LI+ + G P L ILV DVNDN P F++ ++ ++E+ + ++ A D D GNN + Y I + V N IS S H +S + + DRE + +QL ++A D G P + + + + D ND+ P+F +S Y F E++ +G +G V A+D D+ I S P SS F V G IST+ L Y + + A D G P +A V +HV+D+NDN P EIA Q + + + E + + +V D+DHG N + + ++ ++ H PTS D E + ++L + SD G P T R + V V D NDN P F + E+ +G V + I++ V + ++ Y L+P + +E F+ID SG + DREVQSE++++ A D +S+IT+ + + D NDN P++ + + E + ++ A D D G N + Y L P S+ + +S + LD E V Y + + A D + L +S TV + I D ND++P F+ P G+ +L I T G + A+D D+G+N ++ Y I + F IN+ G I L KSL +K +II A+D G P+ SSL+L+ I G PP
Sbjct: 991 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSS-----FQVHPVTGEISTREPLDRELREL-YDLVVEARDQGTPVRSARVPVRIHVSDVNDNAP--EIADP-QEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSI----------VKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQ-PEPKKSSLNLHLIVQGSHNNPP 1717 HSP 5 Score: 180.259 bits (456), Expect = 2.971e-45 Identity = 183/669 (27.35%), Postives = 294/669 (43.95%), Query Frame = 3
Query: 384 CILILELSGSGP---KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI-KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDG-----VISTK---VALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP--ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENLEGV-------LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDE 2288
+LI L G P F + I + DVNDN P F++ + + EN+ V A D D NG V YAI + + + I P T + I ++ D E E +L+++AKD G PL ++ + I +TDVND+ P N + I + G+ A R+++ P + ++ + +V +G ++T+ + LV V D Y + ++A D G P L A+ ++ + +TD+NDN P E + N + E + + +V D+D G N + L + Q F+ L+T S D E + QL ++ D GVP L++T + V + D NDN PIF + +VS+ EN P+G + ++ A D D GVNA + Y + + L F + SG I D E +S Y+ A D L + I + +T D NDN P F R + ++E+ + + V A D D G Q+ Y + N + +F I R+ G+IFV + L + + I A D GN + V + I D P F + + ++ I +GT + + A D + + Y+I S F I T+ G+I + K L E
Sbjct: 253 SLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTG-------AIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVA-------RISVH-DPDSKTEYAN-VNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHAN----VMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETH---AQWFQIDPQTGLITT-RSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLT--DVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIP--RGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHE 893 HSP 6 Score: 173.711 bits (439), Expect = 2.641e-43 Identity = 186/704 (26.42%), Postives = 308/704 (43.75%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHA-----PQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS--PSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLV--LTENCQSNSYIAKVTVSDK--DHGNNGQVECKLDNNYLFNLESIQN------FENRRHYK-LVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVV--VKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML----------SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDH---LILRMNSSITIHVTILDENDNPPKFL-------RTFSFHIKE--NLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRY----LDRERVDRYSIEIGARDHGN-RPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETI-QGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSI----YLNKSLQDEHILP 2300
RD + +L P + ++ + V D NDN P F + + F+I EN + V + A D D G N ++ Y++ P +++ F Q H + ++ + DRE+ E + L++ A+D G P ++ + ++I ++DVND+A PQ + S R P G + +V A D+D +I S S FS+ GVI T+V L + S YR+ + A D GNP + V V D+NDNRP +S LV + E+ + ++ ++ D N E D + L + F+ RH LV A DREV+ +L I D + + ITV V D NDN P + + + + E P+GT + A D D G N ++Y L + + F +D +G ++ + D E EY + A D + R+ +S+T+ + ILD ND+ P F+ +T S I + + V+ + AVD+D G N Q+ Y + N F I+ I K D E+ R+++ IGA+DHG P SS + +I+ ++N P F++ + +E + G+ + A ENA + Y I + +F+++ G I ++ Q ++LP
Sbjct: 1116 RDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP--INSSF--------QVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPP----GTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSI-YRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSS------LVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVA--RLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQ---AVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLP 1793 HSP 7 Score: 166.007 bits (419), Expect = 7.233e-41 Identity = 190/782 (24.30%), Postives = 345/782 (44.12%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDN-NVEMLQSLDRENLITNQKCDTS------KQYNYNRDSQCILILELSGSG-PKFYQ----LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSS-LTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSA-SSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDH-----------GNNGQV--------ECKLDNNYL-----FNLESIQNFENRR--HY-------------------KLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDP-FSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKE--NLEGVLGRVEAVDKD--------IGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL--SIETIQGT-----KIFTAKAIDNDT-GENAKIVYTIQ-SQTIFYINTSDGSIYLNKS 2276
V +NSP F + P+ P + + L++ N +++ S+ NL D+S + + + S+ L ++ S G PK Q + I V D NDN P F + + E++P V A D D G N +VY++ + +F + S + + DRE+ + +++A D G + S+ + ++I++ D+ND+ P F + Y P I GQ + +V A D D+ + I+ S +A +S + KF + G +S +L S + ++A D GNP ++ + + + + P++ N+ R++L EN S + + +V D GN + E +++ +L F+ S+ R HY + +T+ + + + ++ ++ P L + + + ++DENDN P F ++ ++ E GT V ++ A D D G NA+++Y + +N F I+P FSG++ T + DRE++ YK+K A D + +M + TI V I+D NDN P F + E L V+ + A D D +G + +D + N S +F + R V KR LD E Y +++ A D + + T + + ++D NDN+P F+ +P + + +I I + + T A D D+ G N+K++Y I+ +Q F ++ S+G + +N S
Sbjct: 1840 VNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA-NETQWQFAI--------DGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKL-LHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRF--QNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVD--IENMS-IFALDRYSGKLV-LKRRLDYELQQEYELDVIASDAAHE---ARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMS 2602 HSP 8 Score: 163.696 bits (413), Expect = 3.296e-40 Identity = 180/662 (27.19%), Postives = 288/662 (43.50%), Query Frame = 3
Query: 444 VADVNDNVPSF------DRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNP-PLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIM-DKFSVAFD-GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATS-----------------------TVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVP-SLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSS-ITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDY------------FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNK 2273
+ D ND+ P F T + I++ + V +A D D G+NG + Y I +F + ++ G +K + D E F LI+ AKD G P P SSL + + + +++ P+F Q+ YR E++ G + QV T K + +S + + D F V + G+I+T+ S + Y +P+ D+ + ++S T+ + V D+NDN P S L + EN + I V SD D G N + + L N SI + +L P DRE + L I SD G P S IT+ V+D+NDN P F + S+ E+ P+GT V ++ A+D D+GVNA++ Y L+ E F ID SG+ITT DRE+Q+ Y A D + S+ + + + +LD NDN P F R + + ++ L +V+A+D D+G NA++ Y F NPS G + SQ L E +E+ ARD GN P +S +E++I + +P + L + GT++ A+ +D G K+ ++ + I +++ G I +NK
Sbjct: 1592 ILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRI---NSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQV--TAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQA-SYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYG---LSVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSG----ELSARP---LDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPS-------TGALSASQS--LASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSFGAGNEDGILSLDSLSGEIRVNK 2226 HSP 9 Score: 132.88 bits (333), Expect = 1.029e-30 Identity = 174/687 (25.33%), Postives = 284/687 (41.34%), Query Frame = 3
Query: 438 ILVADVNDNVPSF-DRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDK--DISS----------RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVD---SGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNY-LFNLESIQNFENRRHYKLVTAPT--SSFDREVKDHHQLNIICSDMG---VPSLTTTRPITVVVKDENDNPPIFYR------QHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSF-----DREVQSEYKVKATAYDHLILR-MNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDI--GQNAQMDYFLFNPSP----LFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSST-----------------------TVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEH 2291
I V+DVNDN P D + E P EV A D D G N S+ Y+I S+ L S G ++ +++ D E ++L + A D GNPP + +++++ D+ND+ P F SS F E G +G + ++ D+ RVT ++P I F + L+ ++R+ I A+D S NP +A TV + V D+NDN P L ++E + I T +D D G NG ++ +L + N Q R L A + + D E + L + D L T+ + + + D ND+ P F + S+ I + IG V + A+D+D G N Q+ Y ++ E F I+ +G+I S D E + + A DH SS+ +H+ + ++NPP+FL+ + I EN+ ++ K + +NA + Y + P+ LF + I ++ ++ DRE Y + + RD + SS+ T+ I + D+NDNSP F +PG LS+ E + I T A D D G NA ++Y+I + F I++S G + +++H
Sbjct: 1244 IHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSG---VIRTRVV--LDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAI-TVKIEVADVNDNAP----EWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEI--PAGVANDLFHVDWQRGIITTRGQF-DRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEF---RPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQH 1914 HSP 10 Score: 113.62 bits (283), Expect = 6.964e-25 Identity = 153/585 (26.15%), Postives = 264/585 (45.13%), Query Frame = 3
Query: 660 SLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQF--NQSSYRF-------NTPESIVQGQAIGQVFATDKDI---SSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALV--YVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPT----SSFDREVKDHHQLNIICSDMGVP------SLTTTRPITVVVKDENDNPPIFYRQHE-SVSILENLPIGTKVTRLKAIDKDI--GVNAQIKYMLSPECLEN-FNIDPFSGM--ITTRVSFDREVQSEYKVKATAYD-HLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGV---LGRVEAVDKDIGQNAQMDYFLFNPSP-------LFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS-QTIFYINTSDGSIYLNKSLQ 2282
S KL + + D E+ +E++L +IA D + T LT++++ D ND+AP F Q F ES+ + V ATD D +S+V ++ P+ + FSV +GV+S ++ + VSSS DY + IIA D+G P L +++ + V D R N Y A+++ + G V +L + L +I ++L+ + DRE D ++L ++ S P + ++ + + + D NDN PIF R + I E P+ + +L+AID D N+++ Y ++ E+ F ID +G+ + R+ +D +S Y++ A D H + S + + DENDN PKF T H E V + R A D D G Q++Y + P+P +F + S +G V+ D E+ RY +E+ A D G + +S V + I+ ++ +P F E L ++ QG + A D+D+G + ++VY + + + F +N S G++ + + L+
Sbjct: 2484 SGKLVLKRRLDYELQQEYELDVIASDAAHEARTV-LTVRVN--DENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA-----QEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGR-----------------SQFLQNQYRAQIS----EAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKS-YELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSI-GPAPSDESSWKMFRVDSESG--LVTSAFVFDYEQRQRYDMELLASDMGGK--KASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLK 3033 HSP 11 Score: 109.383 bits (272), Expect = 1.538e-23 Identity = 154/639 (24.10%), Postives = 258/639 (40.38%), Query Frame = 3
Query: 306 SLDR--ENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAH-------NEVELPLARDPD-----------RGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNP------TLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLD-----NNYLFNLESIQNF---ENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP-----ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENL---EG-VLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR-NGDIFVSQKRYLDRERVDRY-------SIEIGARDHGNRPLTSSTTVEIIID 2066
+LDR L+ ++ D Q Y D ++ + L + V D NDN P F +A+ PA+ +E+ L+ D D GNN V+Y I+P+ + + PS S+ + LQ + F + +IAKD G P L SS +++ D QF Q+ YR E+ G + Q+ D S + SA + K V + + L Y++ ++ P ++ +V++ + D NDN PI + ++ + ++E IA++ D D N E D + ++F ++ + NR Y R HHQ +CS +P + + DENDN P F + EN P+G+ V R A D D G Q+ Y + P + F +D SG++T+ FD E + Y ++ A D + +S+ + V I ++ P+F RT+ F + + +G V+G+V A D D G + ++ Y L P F+++R +G + + +K LD + S+ I A + L+S VEI +D
Sbjct: 2479 ALDRYSGKLVLKRRLDYELQQEYELD-----VIASDAAHEARTVLTVRVNDENDNAPVF--------LAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA---QEGFSVHPSNGV---VSVNMSRLQPAVSSSGDYF-VRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDL--------YKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAE---ISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQ-RPLCS---------LQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASD--MGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLKLDGDGDGNLYMDGRDISLVISASSGRHNSLSSMAVVEIALD 3074 HSP 12 Score: 104.375 bits (259), Expect = 5.262e-22 Identity = 170/649 (26.19%), Postives = 280/649 (43.14%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVL------TENCQSNSYIAKVTVSDKD-HGNNGQVECKLD-NNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLK--AIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVK-ATAYDH-----LILRMNSSITIHVTILDENDNPPKFLRTFSFHIK----ENLEGVLGRVEAVDKDIGQ--NAQMDYFLF--NPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARD-HGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-------QSQTIFYINTSDGSI 2261
+ +L I + D NDN P F + F ++E + V A D D G+N + Y I N FV I P+ + ++ I+ DREI + ++L +IA D G P +T + TI++ I DVND+ P F ++ E+ G I + A D D +T + ++ I + A D G + K L Y +Y + +IA D+ + A + + V V D NDN P+ +A +L +E+ + + V +D D GNN +V ++ F++ + +L A +SS D V+ II D G P+L ++ + V D F + I E P+G+ V +L A+D+ + + A + + E L+ S I DRE YK++ ++ H L +S I++ +TILD NDN P F R+ + + L + +++A+D D N+++ Y + N +F I G +FV+ + D Y + I A D H RPL S + + D NDN P F P L+ G+ +F A A D D G ++ Y+I S +F +++ G +
Sbjct: 2305 YAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFV-IEPAFS----GIVRTNIV--LDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQ-EYELDVIASDAAH---EARTVLTVRVNDENDNAPVF-LAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVR------IIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEES-AFELLQ-------SKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYD-SGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKF--PLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLV 2923
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900) HSP 1 Score: 209.149 bits (531), Expect = 2.983e-54 Identity = 172/575 (29.91%), Postives = 273/575 (47.48%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVL-ISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE-NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLF---NPSPLFEISRNGDIFVSQKRYLDRERVD----RYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTF 2093
QL + V D NDN P F F + EN P + A D D G N + Y+I S + F L + P T ++ ++ DRE F ++AKD G PP ++S ++ I + DVND+ P FN Y N E G + V ATD D SR+ ++ + +F++ L+ ++ S DY+ + + A DSG + TAT V +++TD N+ PI E A + + + E+ + + V+ +D D G N Q+ L+ + L S F N + +VT + DRE + L + D G PSL+ T + + V D NDN P F SILE+ +GT V ++ A D D+G+N +IKY+LS +E+ F IDP SG I T DRE + + + A A D ++S++ + + + D ND+PP F + ++ EN + V+G + A D D G NA + Y + + + ++R G + + L +D R E+ R + PL + +EI++ D+NDN+P
Sbjct: 674 QLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLAVDPRTGW-------VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEIT---TGNTRGRFAI----TSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSAS----VFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT--NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS---ERAQLLTMTELDYESTRKRFELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 194.512 bits (493), Expect = 1.148e-49 Identity = 185/694 (26.66%), Postives = 307/694 (44.24%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTN---QGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPP---LTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQG---QAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDP--FSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDY--------FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI----FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKI 2420
L + V D ND+ P+F+ F I E + + V A D D G N + Y I+ AV++ L + S + S DRE + + L++ A DL + T++ ++++ + D ND+ PQF++ +Y PE G + + ATD D + I + +FS+ + G +S L Y S YR+ I A D G+P+ + T+ +LV+V D NDN P + ++ + EN I +V D D G N ++ + D+N+ ++ R + P DRE + ++ D GVP + + + + V+D NDN P F ++ ++ E+ P GT VT + A D D ++++ Y + + F I G+IT S D + + + + A D + + T+H+ I D N+ P F +S + E+ + + V A D D+G NAQ+ Y L +P P + G I + LDRE Y + + A+D GN L+ +T VEI + D+NDN+P F P ++ + + GT + A D D G N +I Y + + I F I+ + G+I NK L E + + A D G P ++T + + S P + KI
Sbjct: 450 LQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE--AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-IIGGNTQSQFSIDSMSGDVSLVKPLDY-ESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQES----VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDP------RTGWVQTIKP---LDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAP--LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL--YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKI 1118 HSP 3 Score: 191.43 bits (485), Expect = 1.019e-48 Identity = 182/669 (27.20%), Postives = 301/669 (44.99%), Query Frame = 3
Query: 450 DVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMM--------SPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVD---SGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNS---YIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQ---------NFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENF--NIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENL-EGV-LGRVEAVDKDIGQNAQMDYFLFNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI--------FYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
++ + P F++ + + E PA V ARDP+ + VVY++ S L + G + S DRE+ + ++A D PP + + T+++++ D NDH+P F + + E G + + ATD+DI I + A Q M F + + GVIST+ +L +S Y + + A D + + TAT++V V V D NDN P S + + + E+ + +A + +D D GNN + + + F+++S+ ++E+ R Y+LV I D G PS + T + V V D NDN P FY S+LEN+P+G + R++A D D G NA+I Y +S E +NF +DP +G + T DRE Q + + A D + ++S ++ +T+ D NDN P F + + ++ E+ G + V A D D + N F I S+NG ++ + LD ++ R+ + + A D G R + + TV I I D N+ +P F E P ++ + GT + A D+D G NA+I Y++ ++I F IN G+I N L E + ++A+D G
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPE---DSPVVYSMVSLLDSRSQSLFKVDSRTG-----VVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLV------------------IRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSIS-ERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIF-ENAP-YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGG 983 HSP 4 Score: 114.005 bits (284), Expect = 5.455e-25 Identity = 97/344 (28.20%), Postives = 165/344 (47.97%), Query Frame = 3
Query: 1443 VVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAID-KDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPS-----------PLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHG---NRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTK---IFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
V ++ + P F + S+LE P G VT ++A D +D V + +L F +D +G++TT S DRE+ + + A D + + T+ V +LD ND+ P F F I+E + + + A D+DIG+NA+++Y + + P+F I SR+G +S + LDRE D Y + + A D + T++ +V++ + D NDN P F E + + + GT+ + +A D D G NA I Y I +Q+ F I++ G + L K L E + +++I A+D G ++ T+ L +N I + + P
Sbjct: 348 VRRELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSG--VISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERT--YTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAP 687
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899) HSP 1 Score: 209.149 bits (531), Expect = 3.168e-54 Identity = 172/575 (29.91%), Postives = 273/575 (47.48%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVL-ISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE-NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLF---NPSPLFEISRNGDIFVSQKRYLDRERVD----RYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTF 2093
QL + V D NDN P F F + EN P + A D D G N + Y+I S + F L + P T ++ ++ DRE F ++AKD G PP ++S ++ I + DVND+ P FN Y N E G + V ATD D SR+ ++ + +F++ L+ ++ S DY+ + + A DSG + TAT V +++TD N+ PI E A + + + E+ + + V+ +D D G N Q+ L+ + L S F N + +VT + DRE + L + D G PSL+ T + + V D NDN P F SILE+ +GT V ++ A D D+G+N +IKY+LS +E+ F IDP SG I T DRE + + + A A D ++S++ + + + D ND+PP F + ++ EN + V+G + A D D G NA + Y + + + ++R G + + L +D R E+ R + PL + +EI++ D+NDN+P
Sbjct: 674 QLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLAVDPRTGW-------VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEIT---TGNTRGRFAI----TSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSAS----VFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT--NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS---ERAQLLTMTELDYESTRKRFELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 194.126 bits (492), Expect = 1.295e-49 Identity = 185/694 (26.66%), Postives = 307/694 (44.24%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTN---QGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPP---LTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQG---QAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDP--FSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDY--------FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI----FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKI 2420
L + V D ND+ P+F+ F I E + + V A D D G N + Y I+ AV++ L + S + S DRE + + L++ A DL + T++ ++++ + D ND+ PQF++ +Y PE G + + ATD D + I + +FS+ + G +S L Y S YR+ I A D G+P+ + T+ +LV+V D NDN P + ++ + EN I +V D D G N ++ + D+N+ ++ R + P DRE + ++ D GVP + + + + V+D NDN P F ++ ++ E+ P GT VT + A D D ++++ Y + + F I G+IT S D + + + + A D + + T+H+ I D N+ P F +S + E+ + + V A D D+G NAQ+ Y L +P P + G I + LDRE Y + + A+D GN L+ +T VEI + D+NDN+P F P ++ + + GT + A D D G N +I Y + + I F I+ + G+I NK L E + + A D G P ++T + + S P + KI
Sbjct: 450 LQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE--AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-IIGGNTQSQFSIDSMSGDVSLVKPLDY-ESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQES----VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDP------RTGWVQTIKP---LDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAP--LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL--YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKI 1118 HSP 3 Score: 191.045 bits (484), Expect = 1.209e-48 Identity = 182/669 (27.20%), Postives = 301/669 (44.99%), Query Frame = 3
Query: 450 DVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMM--------SPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVD---SGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNS---YIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQ---------NFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENF--NIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENL-EGV-LGRVEAVDKDIGQNAQMDYFLFNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI--------FYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
++ + P F++ + + E PA V ARDP+ + VVY++ S L + G + S DRE+ + ++A D PP + + T+++++ D NDH+P F + + E G + + ATD+DI I + A Q M F + + GVIST+ +L +S Y + + A D + + TAT++V V V D NDN P S + + + E+ + +A + +D D GNN + + + F+++S+ ++E+ R Y+LV I D G PS + T + V V D NDN P FY S+LEN+P+G + R++A D D G NA+I Y +S E +NF +DP +G + T DRE Q + + A D + ++S ++ +T+ D NDN P F + + ++ E+ G + V A D D + N F I S+NG ++ + LD ++ R+ + + A D G R + + TV I I D N+ +P F E P ++ + GT + A D+D G NA+I Y++ ++I F IN G+I N L E + ++A+D G
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPE---DSPVVYSMVSLLDSRSQSLFKVDSRTG-----VVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLV------------------IRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSIS-ERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIF-ENAP-YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGG 983 HSP 4 Score: 114.005 bits (284), Expect = 5.408e-25 Identity = 97/344 (28.20%), Postives = 165/344 (47.97%), Query Frame = 3
Query: 1443 VVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAID-KDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPS-----------PLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHG---NRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTK---IFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
V ++ + P F + S+LE P G VT ++A D +D V + +L F +D +G++TT S DRE+ + + A D + + T+ V +LD ND+ P F F I+E + + + A D+DIG+NA+++Y + + P+F I SR+G +S + LDRE D Y + + A D + T++ +V++ + D NDN P F E + + + GT+ + +A D D G NA I Y I +Q+ F I++ G + L K L E + +++I A+D G ++ T+ L +N I + + P
Sbjct: 348 VRRELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSG--VISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERT--YTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAP 687
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 299.286 bits (765), Expect = 3.781e-85 Identity = 234/762 (30.71%), Postives = 375/762 (49.21%), Query Frame = 3
Query: 117 LVSLFIYINILWYSN-GECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ----YNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRI----PIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
LV LF + ++ + + V+E P VRI N++K PDI+ + F+ ++ D + +++ E L T + D K +N R I + L + ++ L+ D+NDN P F N I EN+ ++ +P A DPD G NG Y + S ++F L T +G D +L + QS DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ + ATD D+ S I S S+QI F I + L+ V D + +I + S + + +TV+V+VTDINDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNID SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + ++++ +D G
Sbjct: 10 LVVLFTCLFLMCRAQEKDYTVKEEQPENVRIGNLRKDLNLNLDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSV--SEFGLDIIETPEG-DKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFS--FSNQISPSTKRHF--AIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLHRLVVKVKDLG 757
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 300.056 bits (767), Expect = 7.208e-85 Identity = 234/762 (30.71%), Postives = 375/762 (49.21%), Query Frame = 3
Query: 117 LVSLFIYINILWYSN-GECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ----YNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRI----PIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
LV LF + ++ + + V+E P VRI N++K PDI+ + F+ ++ D + +++ E L T + D K +N R I + L + ++ L+ D+NDN P F N I EN+ ++ +P A DPD G NG Y + S ++F L T +G D +L + QS DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ + ATD D+ S I S S+QI F I + L+ V D + +I + S + + +TV+V+VTDINDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNID SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + ++++ +D G
Sbjct: 10 LVVLFTCLFLMCRAQEKDYTVKEEQPENVRIGNLRKDLNLNLDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSV--SEFGLDIIETPEG-DKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFS--FSNQISPSTKRHF--AIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLHRLVVKVKDLG 757
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 276.559 bits (706), Expect = 8.041e-77 Identity = 227/789 (28.77%), Postives = 365/789 (46.26%), Query Frame = 3
Query: 108 WMTLVSLFIYINILWYSNGECVVEENSP-IFVRICNVKKTFPDIENP-TIDNFQNFFRLNDNNVEML---QSLDRENLITNQKCDTSKQYNYNRDSQCILILELS------GSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI--KPSAVSNKFVLISPSTNQGHDSSL-KLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS-PSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS----SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS----PECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENLEGV--LGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
W ++ ++I +L + V EE P + + PD + ++ + R++ ++ S+DRE+L + C N C L E+S G+GP+ + I + D NDN P F I EN+ +P+A D D G+NG YA+ P A + L S Q D L +L +L + DRE+ + + L + D G+PP SS ++I ITD ND+ P+F +S Y PE+ G ++ QV A D D+ + S SS +M S I +++V S D + + A D+G + ++ + V + V D NDN P I I ++++ ++E+ + +A V VSD+D G N V C + + F L S N R K T+ D E +++ I+ D G P+L++T + V V D NDN P+F V E G KV + A D D G NA++ Y ++ PE L F I+P +G + DRE Y+ A D + + + T+ V +LD NDN PKF L +SF ++EN+ + +G V D D G+NA++ + + F I +NG + DRE+ YS + A D G+ P +S + I + D NDN+P +P + L T T + + +A D D G N+++ + I +F I +S+G I L K +HI ++++ +D G P+ TT+ +H+
Sbjct: 39 WSRWSAMLVWILLLLCCSANVVTEEQPPNTLIGSLASDQGLPDTGHLYKLEVGAPYLRVDGKTGDIYTTENSIDRESL---KDC-----RNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYALTTGPEATN----LFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLS------IDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGL--FEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMI-QNGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRI-SSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHI 805
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CR847522.1 (pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:4879379:1 gene:ENSDARG00000111493.1 transcript:ENSDART00000185190.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR847522.1) HSP 1 Score: 275.789 bits (704), Expect = 1.222e-76 Identity = 217/686 (31.63%), Postives = 351/686 (51.17%), Query Frame = 3
Query: 372 RDSQC---ILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTI--MMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVD-SGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLH 2366
DS+C I ++ L + ++ I+V D NDN P F N I EN+ ++ +P A DPD G N Y + + F L T +G +L + Q+ DRE + + + + +D GNP +S+ +++ +TDVND+ P F +S + PE+ G ++ Q+ ATD D+ + I M S F+ ++T L+ V D +++ ++A D S +P A +T+ ++VTD+NDN P I++ S N ++L+E N+ IA +TVSDKD NG+V C ++ + F+L+++ ++N+ Y L T+ + D E + I+ SD G PSL T + V ++DENDNPPIF + ++++EN +T + A D+D G NA+I Y L P F++D +G++T FDRE Q + TA D+ + S + VTILDENDN PKF F F + ENL +G + D D G+NA + + N + F + + + S + DRE+ Y+ ++ A D+G+ P +S+ V I + D+NDN+P I P L + I G+ + A+D DTG NA++ YTI S +++F I+ G+I L + I +++++ D G PK SLH
Sbjct: 104 EDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNG--QSAFGLDIVETPEGEKWP-QLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFA------LNTTTGLITVQRPLDREETAIHKLTVLASDGSSSP---ARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAV--YDNQ--YLLETS--ALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNA-SFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSF-DREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLG-YPK----SLH 764
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 275.018 bits (702), Expect = 1.306e-76 Identity = 217/686 (31.63%), Postives = 351/686 (51.17%), Query Frame = 3
Query: 372 RDSQC---ILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTI--MMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVD-SGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLH 2366
DS+C I ++ L + ++ I+V D NDN P F N I EN+ ++ +P A DPD G N Y + + F L T +G +L + Q+ DRE + + + + +D GNP +S+ +++ +TDVND+ P F +S + PE+ G ++ Q+ ATD D+ + I M S F+ ++T L+ V D +++ ++A D S +P A +T+ ++VTD+NDN P I++ S N ++L+E N+ IA +TVSDKD NG+V C ++ + F+L+++ ++N+ Y L T+ + D E + I+ SD G PSL T + V ++DENDNPPIF + ++++EN +T + A D+D G NA+I Y L P F++D +G++T FDRE Q + TA D+ + S + VTILDENDN PKF F F + ENL +G + D D G+NA + + N + F + + + S + DRE+ Y+ ++ A D+G+ P +S+ V I + D+NDN+P I P L + I G+ + A+D DTG NA++ YTI S +++F I+ G+I L + I +++++ D G PK SLH
Sbjct: 104 EDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNG--QSAFGLDIVETPEGEKWP-QLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFA------LNTTTGLITVQRPLDREETAIHKLTVLASDGSSSP---ARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAV--YDNQ--YLLETS--ALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNA-SFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSF-DREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLG-YPK----SLH 764
BLAST of Protocadherin vs. Ensembl Xenopus
Match: ENSXETT00000047798.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 293.893 bits (751), Expect = 6.105e-83 Identity = 232/749 (30.97%), Postives = 371/749 (49.53%), Query Frame = 3
Query: 171 VVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ-YNYNRDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNP------SPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLN-KSLQDEHILPDKIIISARDSG 2333
+V E P V I N+ K PD+ P F+ ++ D + ++ E T+ + D K +++C +E++ + ++L L+ D+NDN P F N I EN+ ++ +P A DPD G NG Y + N F L T +G D +L + QS DRE + + + + +D GNP +S+ +++ +TDVND+ P F + N PE G ++ Q+ ATD D+ S I + K A D G+I+ K L S + +++ ++A D + + +TV +++TDINDN P I+ + N + L+E N+ IA +TV+DKD NG+V C D++ F L+ + F+N+ + L TA + D E + + I+ SD G P L + + + +KDENDN P+F +S +EN P GT++T++ A D D G NA++ YML P FN+D +G++T DRE Q Y A D+ + ++ T+ +++LD+NDN P F ++F++ ENL G +G + D D G+NA + L N PL + R F DRE+ Y+ ++ A D G+ +S+ V I ++D+NDN P F+ P +L T G+ + AIDNDTG NA + Y+I S+ +F I G+I L K L +H + K++I DSG
Sbjct: 29 IVREELPENVLIGNLLKDLNLTLDPDLSTPL--QFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKG--QNVFGLDVIETPEG-DKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPY-HKLTVLASDGS--STPSRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPV--FDNQ--FLLETA--APLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITF-------DREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSG 756
BLAST of Protocadherin vs. Ensembl Xenopus
Match: ENSXETT00000047801.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 293.508 bits (750), Expect = 9.581e-83 Identity = 232/749 (30.97%), Postives = 371/749 (49.53%), Query Frame = 3
Query: 171 VVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ-YNYNRDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNP------SPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLN-KSLQDEHILPDKIIISARDSG 2333
+V E P V I N+ K PD+ P F+ ++ D + ++ E T+ + D K +++C +E++ + ++L L+ D+NDN P F N I EN+ ++ +P A DPD G NG Y + N F L T +G D +L + QS DRE + + + + +D GNP +S+ +++ +TDVND+ P F + N PE G ++ Q+ ATD D+ S I + K A D G+I+ K L S + +++ ++A D + + +TV +++TDINDN P I+ + N + L+E N+ IA +TV+DKD NG+V C D++ F L+ + F+N+ + L TA + D E + + I+ SD G P L + + + +KDENDN P+F +S +EN P GT++T++ A D D G NA++ YML P FN+D +G++T DRE Q Y A D+ + ++ T+ +++LD+NDN P F ++F++ ENL G +G + D D G+NA + L N PL + R F DRE+ Y+ ++ A D G+ +S+ V I ++D+NDN P F+ P +L T G+ + AIDNDTG NA + Y+I S+ +F I G+I L K L +H + K++I DSG
Sbjct: 49 IVREELPENVLIGNLLKDLNLTLDPDLSTPL--QFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKG--QNVFGLDVIETPEG-DKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPY-HKLTVLASDGS--STPSRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPV--FDNQ--FLLETA--APLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITF-------DREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSG 776
BLAST of Protocadherin vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 293.123 bits (749), Expect = 1.091e-82 Identity = 232/749 (30.97%), Postives = 371/749 (49.53%), Query Frame = 3
Query: 171 VVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ-YNYNRDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNP------SPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLN-KSLQDEHILPDKIIISARDSG 2333
+V E P V I N+ K PD+ P F+ ++ D + ++ E T+ + D K +++C +E++ + ++L L+ D+NDN P F N I EN+ ++ +P A DPD G NG Y + N F L T +G D +L + QS DRE + + + + +D GNP +S+ +++ +TDVND+ P F + N PE G ++ Q+ ATD D+ S I + K A D G+I+ K L S + +++ ++A D + + +TV +++TDINDN P I+ + N + L+E N+ IA +TV+DKD NG+V C D++ F L+ + F+N+ + L TA + D E + + I+ SD G P L + + + +KDENDN P+F +S +EN P GT++T++ A D D G NA++ YML P FN+D +G++T DRE Q Y A D+ + ++ T+ +++LD+NDN P F ++F++ ENL G +G + D D G+NA + L N PL + R F DRE+ Y+ ++ A D G+ +S+ V I ++D+NDN P F+ P +L T G+ + AIDNDTG NA + Y+I S+ +F I G+I L K L +H + K++I DSG
Sbjct: 49 IVREELPENVLIGNLLKDLNLTLDPDLSTPL--QFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKG--QNVFGLDVIETPEG-DKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPY-HKLTVLASDGS--STPSRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPV--FDNQ--FLLETA--APLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITF-------DREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSG 776
BLAST of Protocadherin vs. Ensembl Xenopus
Match: emc7 (ER membrane protein complex subunit 7 [Source:Xenbase;Acc:XB-GENE-945123]) HSP 1 Score: 274.633 bits (701), Expect = 2.968e-76 Identity = 227/797 (28.48%), Postives = 380/797 (47.68%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEMLQS---LDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGP-----KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI----------------------------KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSN----QNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VRI NV K ++ ++++ ++F++++ E+ + +DRE L +C Q ++ +++C + E+S GP + ++ +++ D+NDN P+F + EN P LP A D D G NG Y + + + S+ F L T+ G + +L + DRE + ++L L +D G PP +S +++ ITDVND+ P+F +S Y + E+ G I Q+ ATD D+ + QI F A + V + + V D R ++A D G P T +TV++++ D NDN P+I+I ++ + E+ ++ IA V VSD+D G NG V C + + F L+ + E N++ Y L T ++ D E + + I+ D G PSL++ + V V D NDNPP+F + V+ EN +G +V + A D D G NA+I Y L P F+I P +G IT + DRE Y+ K A D I + + ++ V + D NDN P+F++ F+F++KENL+ +G V +D D G+NA+M F+ S +F I + S + DRE Y+ ++ A D G+ P +++ TV + + D NDN+PT P + LS + T + + A D+D G NA + Y+I +F I+++ G + L L +H ++++ DSG P++T + +H+
Sbjct: 34 IAEEGPADVRIGNVAKEIGIVKGSGDVTFSLESGSDYFKIDNVTGELSTTERRIDREKL---PQC----QMIFD-ENECFIDFEVSVIGPAQSWVELFEGRVVILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYELIQDAGESLYVSGRRGAAESSLYPGKRRMESDSRSSVFELQVADTSDG-EKQPQLIVKGPLDREQRDSYELTLRVRDGGEPPRSSQSILRVLITDVNDNNPRFEKSVYEADLAENSAPGTPILQLRATDYDVG----------VNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPLIDIRKIGRIPVKDGMANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPANDGEGEQNKKKYFLHT--SAPLDYENVKEYNVIIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFSQAVVEVAFPENNVLGERVATVLATDADSGKNAEIAYSLEPSMEGIFSIHPDTGDITVNIILDREQTDRYEFKVIAKDKGIPVLQGTTSVVVQVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLFIEEDSDIFSIENDTGTIYSTVSF-DREHQTSYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPTISFPINSSYAVLSPSSNVRTVVASVVATDSDNGVNADLNYSIVGGNPYKLFEIDSTSGVVSLVGKLTSKHYGLHRLVVQVNDSGQPPQSTIALVHV 808
BLAST of Protocadherin vs. Ensembl Xenopus
Match: emc7 (ER membrane protein complex subunit 7 [Source:Xenbase;Acc:XB-GENE-945123]) HSP 1 Score: 274.248 bits (700), Expect = 3.539e-76 Identity = 227/797 (28.48%), Postives = 379/797 (47.55%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEMLQS---LDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGP-----KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI----------------------------KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSN----QNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VRI NV K ++ ++++ ++F++++ E+ + +DRE L +C Q ++ +++C + E+S GP + ++ +++ D+NDN P+F + EN P LP A D D G NG Y + + + S+ F L T+ G +L + DRE + ++L L +D G PP +S +++ ITDVND+ P+F +S Y + E+ G I Q+ ATD D+ + QI F A + V + + V D R ++A D G P T +TV++++ D NDN P+I+I ++ + E+ ++ IA V VSD+D G NG V C + + F L+ + E N++ Y L T ++ D E + + I+ D G PSL++ + V V D NDNPP+F + V+ EN +G +V + A D D G NA+I Y L P F+I P +G IT + DRE Y+ K A D I + + ++ V + D NDN P+F++ F+F++KENL+ +G V +D D G+NA+M F+ S +F I + S + DRE Y+ ++ A D G+ P +++ TV + + D NDN+PT P + LS + T + + A D+D G NA + Y+I +F I+++ G + L L +H ++++ DSG P++T + +H+
Sbjct: 34 IAEEGPADVRIGNVAKEIGIVKGSGDVTFSLESGSDYFKIDNVTGELSTTERRIDREKL---PQC----QMIFD-ENECFIDFEVSVIGPAQSWVELFEGRVVILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYELIQDAGESLYVSGRRGAAESSLYPGKRRMESDSRSSVFELQVADTSDGEKQP-QLIVKGPLDREQRDSYELTLRVRDGGEPPRSSQSILRVLITDVNDNNPRFEKSVYEADLAENSAPGTPILQLRATDYDVG----------VNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPLIDIRKIGRIPVKDGMANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPANDGEGEQNKKKYFLHT--SAPLDYENVKEYNVIIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFSQAVVEVAFPENNVLGERVATVLATDADSGKNAEIAYSLEPSMEGIFSIHPDTGDITVNIILDREQTDRYEFKVIAKDKGIPVLQGTTSVVVQVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLFIEEDSDIFSIENDTGTIYSTVSF-DREHQTSYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPTISFPINSSYAVLSPSSNVRTVVASVVATDSDNGVNADLNYSIVGGNPYKLFEIDSTSGVVSLVGKLTSKHYGLHRLVVQVNDSGQPPQSTIALVHV 808
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 289.271 bits (739), Expect = 1.550e-81 Identity = 215/687 (31.30%), Postives = 352/687 (51.24%), Query Frame = 3
Query: 375 DSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
D++C +E++ + ++L L+ D+NDN P F N I ENS ++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ + D ND+ P F + + PE+ G ++ Q+ ATD DI +R+ S S+ F ++T L+ V D +++ ++A D G + A +TVLV+VTDINDN P I+I + N ++L+EN N+ IA +TV DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + S+S+ EN G ++T++ A D D G NA+I YML + FN+D +G++T DRE Q +Y A D+ I + S+ T+ VT+LD+NDN P F ++F++ E+L G +G + D D G+N+ + + + + F I + + DRER + Y+ + A D G +S+ V I + D+NDN P FI+P + T GT +F AID+D G NA+++Y+I ++ +F I + G+I L + + ++I+ A D G P + + +++NF
Sbjct: 103 DARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFH------LNTTTGLITVKEPLDREESPSHKLLVLATDGG--STPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPV--FSNQ--FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISF-DRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLG-QPDSLFNVVNVNF 770 HSP 2 Score: 152.525 bits (384), Expect = 5.602e-37 Identity = 165/588 (28.06%), Postives = 259/588 (44.05%), Query Frame = 3
Query: 771 IKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVIST----KVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII---EIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHY-----KLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPP------IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDP-FSG--MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP----PPMNKKIE 2423
I+ I D+ND+AP F + + PE+ A D DI ++ + Q++ ++ VI T K+ + V D Y + + D G P ++T+ + V V D NDN PI EI S + EN S + ++ +D D G N ++ Y NL + N R + L+T DRE H+L ++ +D G P+ T + V V D NDN P I + +V + EN P+ TK+ + +DKD N ++ E F + P FS ++ T D E EY +K A D +N S + + + DENDN P F ++F S + EN L ++ A D D GQNA++ Y L F+ P F + + I + K+ LDRE+ ++Y + A+D+G PL S+ TV + + D NDNSP F + ++ S+ + T D D GEN+ + +I F I+ G I N S E + A D G + +++T+ + +N + +KP PP N E
Sbjct: 125 IRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIG------INGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVS-------IPENAPIGSSVTQLHATDADIGENARIHF-----YFSNL--VSNIAKRLFHLNTTTGLITV-KEPLDREESPSHKLLVLATDGGSTPARAT---VLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEV--PFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKK-LDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVT--DPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFE 683
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 289.656 bits (740), Expect = 4.984e-81 Identity = 215/687 (31.30%), Postives = 352/687 (51.24%), Query Frame = 3
Query: 375 DSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
D++C +E++ + ++L L+ D+NDN P F N I ENS ++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ + D ND+ P F + + PE+ G ++ Q+ ATD DI +R+ S S+ F ++T L+ V D +++ ++A D G + A +TVLV+VTDINDN P I+I + N ++L+EN N+ IA +TV DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + S+S+ EN G ++T++ A D D G NA+I YML + FN+D +G++T DRE Q +Y A D+ I + S+ T+ VT+LD+NDN P F ++F++ E+L G +G + D D G+N+ + + + + F I + + DRER + Y+ + A D G +S+ V I + D+NDN P FI+P + T GT +F AID+D G NA+++Y+I ++ +F I + G+I L + + ++I+ A D G P + + +++NF
Sbjct: 103 DARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFH------LNTTTGLITVKEPLDREESPSHKLLVLATDGG--STPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPV--FSNQ--FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISF-DRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLG-QPDSLFNVVNVNF 770 HSP 2 Score: 152.525 bits (384), Expect = 7.315e-37 Identity = 165/588 (28.06%), Postives = 259/588 (44.05%), Query Frame = 3
Query: 771 IKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVIST----KVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII---EIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHY-----KLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPP------IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDP-FSG--MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP----PPMNKKIE 2423
I+ I D+ND+AP F + + PE+ A D DI ++ + Q++ ++ VI T K+ + V D Y + + D G P ++T+ + V V D NDN PI EI S + EN S + ++ +D D G N ++ Y NL + N R + L+T DRE H+L ++ +D G P+ T + V V D NDN P I + +V + EN P+ TK+ + +DKD N ++ E F + P FS ++ T D E EY +K A D +N S + + + DENDN P F ++F S + EN L ++ A D D GQNA++ Y L F+ P F + + I + K+ LDRE+ ++Y + A+D+G PL S+ TV + + D NDNSP F + ++ S+ + T D D GEN+ + +I F I+ G I N S E + A D G + +++T+ + +N + +KP PP N E
Sbjct: 125 IRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIG------INGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVS-------IPENAPIGSSVTQLHATDADIGENARIHF-----YFSNL--VSNIAKRLFHLNTTTGLITV-KEPLDREESPSHKLLVLATDGGSTPARAT---VLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEV--PFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKK-LDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVT--DPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFE 683
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 289.271 bits (739), Expect = 3.090e-80 Identity = 215/687 (31.30%), Postives = 352/687 (51.24%), Query Frame = 3
Query: 375 DSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
D++C +E++ + ++L L+ D+NDN P F N I ENS ++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ + D ND+ P F + + PE+ G ++ Q+ ATD DI +R+ S S+ F ++T L+ V D +++ ++A D G + A +TVLV+VTDINDN P I+I + N ++L+EN N+ IA +TV DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + S+S+ EN G ++T++ A D D G NA+I YML + FN+D +G++T DRE Q +Y A D+ I + S+ T+ VT+LD+NDN P F ++F++ E+L G +G + D D G+N+ + + + + F I + + DRER + Y+ + A D G +S+ V I + D+NDN P FI+P + T GT +F AID+D G NA+++Y+I ++ +F I + G+I L + + ++I+ A D G P + + +++NF
Sbjct: 103 DARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFH------LNTTTGLITVKEPLDREESPSHKLLVLATDGG--STPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPV--FSNQ--FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISF-DRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLG-QPDSLFNVVNVNF 770 HSP 2 Score: 152.91 bits (385), Expect = 6.630e-37 Identity = 165/590 (27.97%), Postives = 260/590 (44.07%), Query Frame = 3
Query: 765 LTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVIST----KVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII---EIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHY-----KLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPP------IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDP-FSG--MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP----PPMNKKIE 2423
+ I+ I D+ND+AP F + + PE+ A D DI ++ + Q++ ++ VI T K+ + V D Y + + D G P ++T+ + V V D NDN PI EI S + EN S + ++ +D D G N ++ Y NL + N R + L+T DRE H+L ++ +D G P+ T + V V D NDN P I + +V + EN P+ TK+ + +DKD N ++ E F + P FS ++ T D E EY +K A D +N S + + + DENDN P F ++F S + EN L ++ A D D GQNA++ Y L F+ P F + + I + K+ LDRE+ ++Y + A+D+G PL S+ TV + + D NDNSP F + ++ S+ + T D D GEN+ + +I F I+ G I N S E + A D G + +++T+ + +N + +KP PP N E
Sbjct: 123 VKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIG------INGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVS-------IPENAPIGSSVTQLHATDADIGENARIHF-----YFSNL--VSNIAKRLFHLNTTTGLITV-KEPLDREESPSHKLLVLATDGGSTPARAT---VLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEV--PFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKK-LDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVT--DPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFE 683
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 288.886 bits (738), Expect = 3.527e-80 Identity = 212/673 (31.50%), Postives = 344/673 (51.11%), Query Frame = 3
Query: 375 DSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
D++C +E++ + ++L L+ D+NDN P F N I ENS ++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ + D ND+ P F + + PE+ G ++ Q+ ATD DI +R+ S S+ F ++T L+ V D +++ ++A D G + A +TVLV+VTDINDN P I+I + N ++L+EN N+ IA +TV DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + S+S+ EN G ++T++ A D D G NA+I YML + FN+D +G++T DRE Q +Y A D+ I + S+ T+ VT+LD+NDN P F ++F++ E+L G +G + D D G+N+ + + + + F I + + DRER + Y+ + A D G +S+ V I + D+NDN P FI+P + T GT +F AID+D G NA+++Y+I ++ +F I + G+I L + + ++I+ A D G
Sbjct: 103 DARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFH------LNTTTGLITVKEPLDREESPSHKLLVLATDGG--STPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPV--FSNQ--FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISF-DRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLG 757 HSP 2 Score: 152.525 bits (384), Expect = 9.127e-37 Identity = 165/590 (27.97%), Postives = 260/590 (44.07%), Query Frame = 3
Query: 765 LTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVIST----KVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII---EIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHY-----KLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPP------IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDP-FSG--MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP----PPMNKKIE 2423
+ I+ I D+ND+AP F + + PE+ A D DI ++ + Q++ ++ VI T K+ + V D Y + + D G P ++T+ + V V D NDN PI EI S + EN S + ++ +D D G N ++ Y NL + N R + L+T DRE H+L ++ +D G P+ T + V V D NDN P I + +V + EN P+ TK+ + +DKD N ++ E F + P FS ++ T D E EY +K A D +N S + + + DENDN P F ++F S + EN L ++ A D D GQNA++ Y L F+ P F + + I + K+ LDRE+ ++Y + A+D+G PL S+ TV + + D NDNSP F + ++ S+ + T D D GEN+ + +I F I+ G I N S E + A D G + +++T+ + +N + +KP PP N E
Sbjct: 123 VKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIG------INGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVS-------IPENAPIGSSVTQLHATDADIGENARIHF-----YFSNL--VSNIAKRLFHLNTTTGLITV-KEPLDREESPSHKLLVLATDGGSTPARAT---VLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEV--PFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKK-LDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVT--DPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFE 683
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 288.886 bits (738), Expect = 3.527e-80 Identity = 212/673 (31.50%), Postives = 344/673 (51.11%), Query Frame = 3
Query: 375 DSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
D++C +E++ + ++L L+ D+NDN P F N I ENS ++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ + D ND+ P F + + PE+ G ++ Q+ ATD DI +R+ S S+ F ++T L+ V D +++ ++A D G + A +TVLV+VTDINDN P I+I + N ++L+EN N+ IA +TV DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + S+S+ EN G ++T++ A D D G NA+I YML + FN+D +G++T DRE Q +Y A D+ I + S+ T+ VT+LD+NDN P F ++F++ E+L G +G + D D G+N+ + + + + F I + + DRER + Y+ + A D G +S+ V I + D+NDN P FI+P + T GT +F AID+D G NA+++Y+I ++ +F I + G+I L + + ++I+ A D G
Sbjct: 103 DARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFH------LNTTTGLITVKEPLDREESPSHKLLVLATDGG--STPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPV--FSNQ--FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISF-DRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLG 757 HSP 2 Score: 152.525 bits (384), Expect = 9.127e-37 Identity = 165/590 (27.97%), Postives = 260/590 (44.07%), Query Frame = 3
Query: 765 LTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVIST----KVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPII---EIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHY-----KLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPP------IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDP-FSG--MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF-SFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP----PPMNKKIE 2423
+ I+ I D+ND+AP F + + PE+ A D DI ++ + Q++ ++ VI T K+ + V D Y + + D G P ++T+ + V V D NDN PI EI S + EN S + ++ +D D G N ++ Y NL + N R + L+T DRE H+L ++ +D G P+ T + V V D NDN P I + +V + EN P+ TK+ + +DKD N ++ E F + P FS ++ T D E EY +K A D +N S + + + DENDN P F ++F S + EN L ++ A D D GQNA++ Y L F+ P F + + I + K+ LDRE+ ++Y + A+D+G PL S+ TV + + D NDNSP F + ++ S+ + T D D GEN+ + +I F I+ G I N S E + A D G + +++T+ + +N + +KP PP N E
Sbjct: 123 VKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIG------INGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVS-------IPENAPIGSSVTQLHATDADIGENARIHF-----YFSNL--VSNIAKRLFHLNTTTGLITV-KEPLDREESPSHKLLVLATDGGSTPARAT---VLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEV--PFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKK-LDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVT--DPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFE 683
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 7.389e-82 Identity = 215/669 (32.14%), Postives = 350/669 (52.32%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 7.813e-82 Identity = 215/669 (32.14%), Postives = 350/669 (52.32%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6WXV7|PC11X_PONPY (Protocadherin-11 X-linked OS=Pongo pygmaeus OX=9600 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.497e-81 Identity = 221/708 (31.21%), Postives = 363/708 (51.27%), Query Frame = 3
Query: 258 FQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ-YNYNRDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
F+ ++ D + ++ E T + D K RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 63 FKLVYKTGDVPLTRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETP-NHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6X862|PC11X_GORGO (Protocadherin-11 X-linked OS=Gorilla gorilla gorilla OX=9595 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.664e-81 Identity = 215/669 (32.14%), Postives = 350/669 (52.32%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNMFGLDVIETPEG-DKMPQLIVQKELDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q9BZA7|PC11X_HUMAN (Protocadherin-11 X-linked OS=Homo sapiens OX=9606 GN=PCDH11X PE=2 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 4.238e-81 Identity = 215/669 (32.14%), Postives = 351/669 (52.47%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPS--ASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
RD C +E++ + ++L L+ D+NDN P F N I ENS +++ LP A DPD G NG Y + S N F L T +G D +L + + DRE + + + + +D G P +S+ +++ +TD ND+ P F ++ + PE+ G ++ Q+ ATD DI I S S S+ F + A G+I+ K L + ++++ ++A D G + A + VLV+VTD+NDN P I+I + N+ +VL+EN N+ IA +TV+DKD +NG+V C D+ F L + F N+ + L TA + D E + + ++ +D G P L + + + VKDENDN P+F + +VSI EN G ++T++ A+D D G NA+I Y+L P+ F++D +GM+T DRE + +Y A D+ + + S++T+ V+I+D+NDN P F ++F++ ENL G +G + D D G N+ + + + + F I + + DRE+ + Y+ + A D G +SS V I + D+NDN P FI P L + T GT +F A+DNDTG NA++ Y+I ++ +F I+ G+I L + + ++++ A D G
Sbjct: 102 RDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS--QNIFGLDVIETPEG-DKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDR-EETPNHKLLVLASDGG--LMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPV--FSNQ--FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF-DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLG 757
BLAST of Protocadherin vs. TrEMBL
Match: A0A0S1VVS0 (Protocadherin-h OS=Lethenteron camtschaticum OX=980415 GN=Pcdh-h PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.841e-89 Identity = 232/745 (31.14%), Postives = 379/745 (50.87%), Query Frame = 3
Query: 195 FVRICNVKKTFPDIENPTIDNFQN--FFRLNDNNVEMLQS---LDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVA-FDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLE-SIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ---TIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
R N++ P + + ++ R+ ++ E+ + +DRE L + + + Y+ + ++ L + ++ ILV D+NDN PSF N IAEN P L A DPD G NG YA+ + N F L G + S +L I S DRE E +++ L A+D G+PP +S+ +++ +TDVND+ P F QS PE+ G + Q+ ATD D+ + VT S SS F + GVI+ + L ++ YR+ ++A D G + AT+TV V V D+NDN P + + S + + LTE N+ IA + VSD D NG+V C+++ + F L+ + QN EN + + ++ D E K+ + + ++ +D+G P +++T + V ++DENDNPP+F + EN G ++ L A D+D G NAQ+ Y L P+ F ++P +G+++ DRE ++ Y+ A D+ M+ + T+ + +LD+NDNPPKF + F+F + ENL G +G + D D G+NA + + L S +F I+ + S + DRE+ Y+ ++ A D G P TS V I I DINDN+PT + P L + T GT + A D D+GENA++ Y++ +F I+ + G+I L + L H ++++ D+G P++ S + +N
Sbjct: 48 LARDLNLRSLGPGLTYKIVSKYEGSPLVRVRNDTGELFTTATRIDREQLCPDVADEEAGCYHE------VQVVVLPNQYFRLIKVKILVEDINDNAPSFPSPVINLTIAENMPVGTRFSLQAAGDPDAGLNGIQRYAL--TDTGNAFTLEVIEGADG-EKSPQLLIRGSLDRERKEVYEMKLKAEDGGDPPRSSTAILRVTVTDVNDNHPVFEQSQIEVKIPENTPIGTPVIQLRATDADLGLNAEVTYSYSGRVSSPARRLFQLDNLTGVITVRGPLDREDTAL-YRLIVLATDRGPNPVPATATVTVSVADVNDNAPSVAVHDIISPVDGVIHLTEAAPPNTPIALIEVSDPDLEQNGRVTCRIEGDVPFQLKPAYQNHEN----QFLLETSALLDFETKNEYSVRLVATDLGSPRMSSTATVVVRLRDENDNPPVFNPGVVEATAYENNAPGAQIVTLAAGDRDSGKNAQMHYYLGPDAPPAFRLNPSTGVLSVAEPLDREERNLYRFSVIARDNGAPSMHGNATVVIRVLDQNDNPPKFNNKEFNFFLSENLPRFGTVGVISVTDADEGKNALVTFSLVGNSDIFTINPVTGMIQSNISF-DREQKPSYTFQVQAVDAGEPPKTSFAKVTIHIMDINDNAPTVLLPPSNASYRLVTPSTSPGTSVAEVMATDIDSGENAELSYSVVGGNPFNLFAIDQATGNITLTQKLLPAHQGLHRLVVRVNDAG-FPESLYSIVLVNL 776 HSP 2 Score: 142.895 bits (359), Expect = 1.849e-30 Identity = 147/577 (25.48%), Postives = 247/577 (42.81%), Query Frame = 3
Query: 765 LTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPP------IFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPF------SGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF--SFHIKENLEGV-LGRVEAVDKDIGQNAQMDYFLF-NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT-IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP----PPMN 2411
+ +KI + D+ND+AP F E++ G A D D + A + + F++ +G K + + S D Y + + A D G+P ++T+ + V VTD+NDN P+ E + + EN + + ++ +D D G N +V + +N V P DRE ++L ++ +D G + T +TV V D NDN P I + + E P T + ++ D D+ N ++ + + F + P ++ T D E ++EY V+ A D RM+S+ T+ V + DENDNPP F + + N G + + A D+D G+NAQM Y+L + P F ++ + + S LDRE + Y + ARD+G + + TV I + D NDN P F + L+ ++ + + D D G+NA + +++ + IF IN G I N S E + A D+G PKT+ + + ++ + + P PP N
Sbjct: 124 IKVKILVEDINDNAPSFPSPVINLTIAENMPVGTRFSLQAAGDPDAGLN---GIQRYALTDTGNAFTLEVIEGADGEKSPQLLIRGSLDRERKEVYEMKLKAEDGGDPPRSSTAILRVTVTDVNDNHPVFE----QSQIEVKIPENTPIGTPVIQLRATDADLGLNAEVTYSYSGRVSSPARRLFQLDNLTGVITVRGP---LDREDTALYRLIVLATDRGPNPVPATATVTVSVADVNDNAPSVAVHDIISPVDGVIHLTEAAPPNTPIALIEVSDPDLEQNGRVTCRIEGDV--PFQLKPAYQNHENQFLLETSALLDFETKNEYSVRLVATDLGSPRMSSTATVVVRLRDENDNPPVFNPGVVEATAYENNAPGAQIVTLAAGDRDSGKNAQMHYYLGPDAPPAFRLNPSTGVL-SVAEPLDREERNLYRFSVIARDNGAPSMHGNATVVIRVLDQNDNPPKFNNKEFNFFLSENLPRFGTVGVISV--TDADEGKNALVTFSLVGNSDIFTINPVTGMIQSNISFDREQKPSYTFQVQAVDAGEPPKTSFAKVTIHIMDINDNAPTVLLPPSN 685
BLAST of Protocadherin vs. TrEMBL
Match: A0A210PLG8 (Protocadherin-1 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT12663 PE=4 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 8.767e-84 Identity = 251/870 (28.85%), Postives = 409/870 (47.01%), Query Frame = 3
Query: 270 FRLNDNNVEML--QSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKF-YQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAV-SNKFVLISPSTNQGHDSSLKLKILQ-SFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECK-LDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFN----PSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEP-KPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDXXXXXXXXXXXXXFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCH-------KAINIPPGSTVDRKCSLPVCLNRWDKSKEIGLEEDPLYS 2798
F +++N ++L +SLDR+ + + N + ++ + +G F ++ ILV D+NDN P+FD + + E + +L A+DPD G VY I+ ++ SN ++ + + S+ L I+ + DRE E + L ++A D G PP T S+ + + +TDVN+ P F QS Y E +I V A D D ++ V +SP S+ ++++F + + GVI+ + +L+ S+ YR+ + A D + + + V + V D ++N P I + + N ++E+ + +A V V+DKD G NG V C L++N+ IQ +E+ YK+V +S +REV + + + + C D G P T V+V DENDN P F +Q I EN IG K + A D D G NA + Y L+P F + P +G I+ + +REVQ +Y + A D + + ++V + DENDN P F F F+++ENL +G V A D D+G N ++Y L + P+P F + NG I S LDRE V+RY + + A D G+ P S + + + D NDN P + P + +++ ET Q I T A D D+G N+K+ + + I F +N+ G IYL K L I + +D G+ P T ++ + S S+ P I S+ T L ++ +F ++ RR +++ ++ D F + A A DLT +R C+ I IP +DR SL V + D I +DP+++
Sbjct: 77 FYVDENTGDLLTSESLDRDVICAFVTTGSDCYLN-------MFVIARTSTGSFFKIEIQILVIDINDNTPTFDEDVVSLSVPEGTELGTSFDLDGAQDPDSG-----VYTIQSYSINSNDSPFVAKADQFPNGQSMLLLIVNGTLDREKTESYMLHILAYDGGQPPNTGSIMVNVTVTDVNEFRPNFTQSVYNVTIMEDHDVDGSITTVQAIDPDGGVNGEVLYSLSPLQSAAVLERFRIDSTKGVITLRTSLME-DSNEGYRVIVEAYDRAKQPMMSQAQVFIKVIDNHNNVPTIRVDLLSNTNFAEISEHASQGAAVAHVAVTDKDTGANGLVVCNVLNDNF-----RIQKYEDM-EYKIVVY--TSLNREVAEEYNVTVKCDDAGTPPKHVTSTFRVLVLDENDNAPRFTQQKYFAHIRENNVIGQKAVTVTATDIDKGTNALVTYALAPTNNGRFQVQPETGQISVNIQLNREVQGQYSFQIMAVDKGTPALTGTAVVYVIVEDENDNSPTFGENHFHFYVQENLAVNTSIGIVSAYDIDLGDNGVIEYALSSLTEVPTP-FWLMENGSIMTSA--VLDREVVERYDLTMTALDRGDPPREGSAIITVHVIDDNDNGPIIMFPSETNSSVSIPYETPQNRVISTIDAYDKDSGLNSKLSFFTRDLNISEYFLLNSFSGEIYLIKRLSPSDIGMYSFEVLVQDGGMFPLYATRTMTITITDSLTSESFPRYVTIAICISV----------------ITLFLAVLLFFAIYLV-------RRNDMRKPGSFDKQVDDSFSDKTRQDEAEAGFGDLTLDRNCNVYTQQTFSVIGIPRRPPIDRSISLQVPIEH-DTPNSIHPSDDPVWT 898
BLAST of Protocadherin vs. TrEMBL
Match: W5KV42 (Protocadherin 11 OS=Astyanax mexicanus OX=7994 PE=4 SV=2) HSP 1 Score: 306.22 bits (783), Expect = 8.963e-84 Identity = 232/757 (30.65%), Postives = 373/757 (49.27%), Query Frame = 3
Query: 126 LFIYINILWYSNGECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCD----TSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
L +++ W + V+E P VRI N++ P+I+ + F+ ++ D + +++ E T + D S +N R I + L + ++ L+ D+NDN P F N I EN+ +N +P A DPD G NG Y + S ++F L T +G D +L + Q+ DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ Q+ ATD D+ S I S S K A D G+I+ K L S+ I + + S P + +TV+V+VTD+NDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNIDP SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + + ++++ +D G
Sbjct: 54 LTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSV--SEFGLDIIETPEG-DKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATP---SRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLG 797
BLAST of Protocadherin vs. TrEMBL
Match: K1R9J3 (Protocadherin-11 X-linked OS=Crassostrea gigas OX=29159 GN=CGI_10016336 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.166e-83 Identity = 240/789 (30.42%), Postives = 395/789 (50.06%), Query Frame = 3
Query: 96 RMKTWMTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKK--TFPDIENPTIDNFQ------NFFRLNDNNVEML--QSLDRENLITNQKCDTSKQYNYNRDSQCIL--ILELSGSGPKFYQLPILV--ADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFS-FHIKENLEG--VLGRVEAVDKDIGQNAQMDYFLFNPS----PLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEP-KPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
R++ W L+SL + ++ L + +EE + V + NV + ++ NPT FQ +F + ++ E+ ++DR+ + Q QC+L + S F+++ I V D+NDN P+F + + +I+E++ + L A D D GNN Y I PS S F + + G S LKL + Q+ DRE + + ++A D G PP T S+T+ I + D+ND+ P F++ SY + + + + FA+DKD I+ V + P + I F + + G I K +L+ S +Y I I A D GN L + S V V V D ++N P+I + + ++ ++E+ + +A V V D D G NG V C + ++Y IQ FE YK+V +S +RE++D++++ + C D G P T V+V DENDNPP F RQ + +ILEN I + + A D DIGVNA ++Y +S E +ID SG + +++ DRE S+ A D + + + T+++ + D NDN P + S F + EN+ V+G V A DKD G N+++ ++L + P FE+ NG + V+ R LDRE V Y ++I A D G+ T + ++I+++D NDN P FI P + + + + + T Q T + T A D DT NA++ Y Q + F IN++ G + + ++L + + + +D P + +L +N I
Sbjct: 5 RVQCW-CLMSLVLQVHALEVTYN---LEEETKRGVLVGNVAEDAGLSNVNNPTFSLFQAGYPAAKWFSITEDLGELHTNATIDRDTICEFQD-------------QCVLNLVAVASTEDGDFHKIKIYVNIIDINDNSPTFSKSVVSLQISEDTAINFSYSLEGAVDLDTGNNSVERYEI-PSHDS-PFHTAADKFSDGR-SMLKLILKQTLDRETHPSYLIQVVAYDGGTPPKTGSMTVNITVGDINDNYPIFSKPSYNVTIMDDLPVESVVVKTFASDKDEGINGEVQYRLDPRQTEDIFQIFHMNSTTGEIYLKESLIS-GSRENYNILIEATDLGNQPLISKSQVFVRVQDNHNNFPVINVNVLSGSDTAEVSEHASQGTVVAHVAVKDPDTGANGLVTCDVISDYF----KIQKFE-ENEYKVVVF--ASLNREMRDNYEVTVNCRDAGSPPRETNFTFPVIVVDENDNPPRFERQTYNANILENNDIDISLLTVSATDDDIGVNADLRYSVSGEAQNLASIDALSGSLRLKIALDREQHSQISFYVYATDSGDVPLTGTATVNIIVKDANDNAPTYPDKISTFVVTENIAAPRVIGTVSAFDKDDGINSEVRHYLMTSNTGELPPFEVKENGTVLVT--RSLDRETVALYELQIMAMDRGSPAKTGYSFIKILVEDTNDNKPIFIFPSEANRSITVPLSTAQNTVVATLTASDGDTDVNAQLRYYTDDQNMTETFVINSATGEVIVARALDSDDLGLYVFKVKVQDWSSNPLSAEETLLINVI 763
BLAST of Protocadherin vs. TrEMBL
Match: A0A3B1ISQ5 (Protocadherin 11 OS=Astyanax mexicanus OX=7994 PE=4 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 8.335e-83 Identity = 232/757 (30.65%), Postives = 373/757 (49.27%), Query Frame = 3
Query: 126 LFIYINILWYSNGECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCD----TSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIA--SSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
L +++ W + V+E P VRI N++ P+I+ + F+ ++ D + +++ E T + D S +N R I + L + ++ L+ D+NDN P F N I EN+ +N +P A DPD G NG Y + S ++F L T +G D +L + Q+ DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ Q+ ATD D+ S I S S K A D G+I+ K L S+ I + + S P + +TV+V+VTD+NDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNIDP SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + + ++++ +D G
Sbjct: 54 LTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSV--SEFGLDIIETPEG-DKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATP---SRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLG 797
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 306.22 bits (783), Expect = 3.395e-87 Identity = 232/757 (30.65%), Postives = 373/757 (49.27%), Query Frame = 3
Query: 126 LFIYINILWYSNGECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCD----TSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEI--ASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
L +++ W + V+E P VRI N++ P+I+ + F+ ++ D + +++ E T + D S +N R I + L + ++ L+ D+NDN P F N I EN+ +N +P A DPD G NG Y + S ++F L T +G D +L + Q+ DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ Q+ ATD D+ S I S S K A D G+I+ K L S+ I + + S P + +TV+V+VTD+NDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNIDP SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + + ++++ +D G
Sbjct: 54 LTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSV--SEFGLDIIETPEG-DKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATP---SRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLG 797
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 306.22 bits (783), Expect = 3.157e-86 Identity = 232/757 (30.65%), Postives = 373/757 (49.27%), Query Frame = 3
Query: 126 LFIYINILWYSNGECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCD----TSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIA--SSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
L +++ W + V+E P VRI N++ P+I+ + F+ ++ D + +++ E T + D S +N R I + L + ++ L+ D+NDN P F N I EN+ +N +P A DPD G NG Y + S ++F L T +G D +L + Q+ DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ Q+ ATD D+ S I S S K A D G+I+ K L S+ I + + S P + +TV+V+VTD+NDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNIDP SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + + ++++ +D G
Sbjct: 54 LTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSV--SEFGLDIIETPEG-DKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATP---SRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLG 797
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 305.449 bits (781), Expect = 3.553e-86 Identity = 233/758 (30.74%), Postives = 374/758 (49.34%), Query Frame = 3
Query: 126 LFIYINILWYSNGECVVEENSPIFVRICNVKKTF-----PDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCD----TSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYA-IKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIA--SSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
L +++ W + V+E P VRI N++ P+I+ + F+ ++ D + +++ E T + D S +N R I + L + ++ L+ D+NDN P F N I EN+ +N +P A DPD G NG Y +K A+ +F L T +G D +L + Q+ DRE + F + + +D GNPP +S+ +++ ++DVND+ P F S N PE+ G ++ Q+ ATD D+ S I S S K A D G+I+ K L S+ I + + S P + +TV+V+VTD+NDN P I+ + N ++L+EN N+ IA +TV+D+D NG+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN P+F + +SI EN GT++ ++ A D D G NA I Y L P+ + FNIDP SG+++ DRE Q +Y A D+ + S++T+ + + D+NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G TS V I + D+NDN P F+ P +L T G+ + AIDNDTG NA++ Y+I + +F I+ + G+I L + + + ++++ +D G
Sbjct: 14 LTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKVGAL--EFGLDIIETPEG-DKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATP---SRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGV-IKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLG 758
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 269.24 bits (687), Expect = 1.126e-74 Identity = 220/715 (30.77%), Postives = 363/715 (50.77%), Query Frame = 3
Query: 267 FFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQC---ILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTI--MMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLH 2366
R+ N E+ + +R I +K Y DS+C I ++ L + ++ I+V D NDN P F N I EN+ ++ +P A DPD G N VY + + F L T +G + +L + Q+ DRE + + + + +D G+P +S+ +++ +TDVND+ P F +S + PES G ++ Q+ ATD D+ + I M S F++ + G+I+ + L ++ ++++ ++A D + +A +TV ++VTD+NDN P I++ S N ++L+E N+ IA +TVSDKD NG+V C ++ + F+L+++ ++N+ Y L T+ + D E + I+ SD G PSL T + V ++DENDNPPIF + +++ EN +T + A D+D G NA+I Y L P F++D +G++T FDRE Q + TA D+ + S + VTILD+NDN PKF F F + ENL +G + D D G+NA + + N + F + + S + DRE+ Y+ ++ A D G+ P +S+ V I + D+NDN P I P L + I G+ + A+D DTG NA++ YTI ++ +F I+ G+I L + + +++++ D G PK SLH
Sbjct: 75 LLRVMSNTGEIFTTSNR---IDREKLCPGPSY---EDSECSFEIEVVILPNDYFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDMGPNS--VYKYELVNGQSAFGLDIVETPEG-EKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETA-NHKLSVLASDGSSS--SARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAV--YDNQ--YLLETS--ALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNA-SFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVSLSILNDNENFILDPYTGVIKSNVSF-DREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLG-YPK----SLH 764
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:103034658]) HSP 1 Score: 271.552 bits (693), Expect = 1.187e-74 Identity = 237/796 (29.77%), Postives = 377/796 (47.36%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEML---QSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK-----FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYA-IKPSAVSNKFVLISPSTN-----------QGHDSSLKLKILQ--------------SFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQ----NNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VR+ NV + T+++ ++F++++ ++ + +DRE L Q+C Q ++ +++C + E+S GP ++ +++ D+NDN PSF + EN P LP A D D G NG Y I+ A S+ L S ST+ Q S +L++ + DRE + ++L L +D G+P +S +++ ITDVND++P+F +S Y + PE+ G I Q+ A D D+ + QI F A + V + + V D R ++A D G P T +T+++++ D NDN P I+I + + + E+ ++ IA V VSD+D G NG V C + + F L+ E N++ Y L T ++ D E + + I+ D G PSL++ + V V D NDNPPIF + VS EN G +V + A+D D G NA+I Y L F+ID SG I DRE Y+ K A D + M S T+ V + D+NDN PKF++ F+F++KENL+ +G V +D D GQNA+M ++ +F I N G IF + DRE+ YS + A D G+ P +++ TV + + D NDN P+ P + L + T + T A D DTG NA + Y+I +F I+ G I L L+ +H ++++ DSG+ ++TT+ +H+
Sbjct: 34 LAEEGPADVRVGNVAADLGIVAGSGEVTFTLESGSDYFKIDNITGDLSTNERRIDREKL---QQC----QMIFD-ENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDGAESSVRRLGSASTDAHSGKRRFDDAQSRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPARSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAMDADVG----------VNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKTDKATMIINIKDENDNVPNIDIRKIGRIYLRDGVANVAEDVVVDTPIALVQVSDRDKGPNGVVTCTVVGDVPFQLKPASEIEGDMNKKKYFLHT--SAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDINDNPPIFTKSTVEVSFPENNAPGERVATVVALDADSGKNAEIFYSLDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGVPVMQGSATVVVLVADKNDNEPKFMQDVFTFYVKENLQPNSPVGMVTVMDSDKGQNAEMSLYIEEEEEIFSIENNTGTIFSTVA--FDREQKTTYSFRVKAVDGGDPPRSATATVSLFVMDENDNPPSVTFPINSSYTLLPPSSNIRTVVRTVIATDTDTGVNADLSYSIIGGNPFKLFEIDPDTGVISLVSKLEQKHFGLHRLVVQVNDSGVPSQSTTTLVHV 807 HSP 2 Score: 95.9005 bits (237), Expect = 1.602e-19 Identity = 90/340 (26.47%), Postives = 152/340 (44.71%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVAL-VYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKD 1454
+ V D+NDN P F + T EN+ V +A D D G N + Y++ S+V+ F + + S + +++ DRE E ++ +IAKD G P + S T+ + + D ND+ P+F Q + F E++ +G V D D MS + G I + VA +++ +R+ AVD G+P +AT+TV + V D NDN P + ++ L + N ++ + V +D D G N + + F L FE +++ S +++ H+L + +D GVPS +TT + V V +
Sbjct: 493 VKVGDINDNPPIFTKSTVEVSFPENNAPGERVATVVALDADSGKNAEIFYSLD-SSVNGIFSIDADSGD--------IRVNTILDREQTERYEFKVIAKDKGVPVMQGSATVVVLVADKNDNEPKFMQDVFTFYVKENLQPNSPVGMVTVMDSDKGQNAE--MSLYIEEEEEIFSIENNTGTIFSTVAFDREQKTTYSFRVK--AVDGGDPPRSATATVSLFVMDENDNPPSVTFPINSSYTLLPPSSNIRT--VVRTVIATDTDTGVNADLSYSIIGGNPFKL-----FEIDPDTGVISL-VSKLEQKHFGLHRLVVQVNDSGVPSQSTTTLVHVYVNE 811 HSP 3 Score: 70.8626 bits (172), Expect = 7.523e-12 Identity = 66/251 (26.29%), Postives = 103/251 (41.04%), Query Frame = 3
Query: 1752 VTILDENDNPPKFLR-TFSFHIKENLE-GVLGRV-EAVDKDIGQNAQMDYFLFNPSPLFEISRNG----DIFVSQKRY-------------------------------LDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT-----IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
V ILD NDN P F + ++EN G L + A D+D G+N Y L + R G D ++R+ LDRE+ D Y + + RD G+ +S + ++I D+NDNSP F K +L + G I KA+D D G N +I Y + T + ++ S G + + + E + + + ARD G PKT +++ +N
Sbjct: 127 VIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDGAESSVRRLGSASTDAHSGKRRFDDAQSRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPARSSQAILRVMITDVNDNSPRF--EKSVYEADLPENSSPGAPILQLKAMDADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKTDKATMIINI 375
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 253.832 bits (647), Expect = 2.324e-70 Identity = 224/735 (30.48%), Postives = 350/735 (47.62%), Query Frame = 3
Query: 210 NVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQS---LDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPS--AVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDK-------FSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLE---SIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLFNPS--PLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGI 2336
N++ T+ + + D R+N E+ + +DRE L Q D + + D Q ++ G K ++ I V D+NDN P+F + EN+PA + A DPD NG Y + PS A + F L T G L + +S DRE + +++ L A D G+PP + S ++I++TD ND++P F+Q+ PE+ G + Q+ A+D+D S ++ S+ F + + + T L+ S YRI I+A D G + AT+TV V VTD+NDN P IEI + N + ++E N +A +TVSD D G NG V C Y++N E ++ Y L T T D E K+ + + I +D G SL+ T +T+ + D NDN P+F VS+ EN IG + + A D+D+ NA++ Y L P+ F++DP +G+I+ DRE ++ Y A D I + + T+ V +LD NDN P+F L F F++ EN+ +G V D D G+N ++ + LF I + S + DRE+ Y +E+ A D G +S+ V I + DINDNSP + P + T+ GT + A+DND NA++ Y I +F+I+ G+I L + L + H ++++ D GI
Sbjct: 66 NLELTYKVMLSKAEDAAPPLVRVNPRTGELFAAGRKMDREALCGGQ--DPGDECHV--DVQVGVLPVQPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPY-LVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHVNLPVALITVSDPDIGANGAVTC-----YIYNPEVPFQLKKLTYPNQYLLETRET--LDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSILGTDNRQLFSIDPESGMIRSNVGF-DREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLPGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGI 787 HSP 2 Score: 119.013 bits (297), Expect = 2.037e-27 Identity = 121/470 (25.74%), Postives = 203/470 (43.19%), Query Frame = 3
Query: 1089 VLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL-----DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN---------FNIDPFSGMITTRVSFDREVQSEYKVKATAYDH--------------LILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISR---NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI--QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
V ++V DINDN P A + + + EN + +D D NG +L F L + + LV S DRE + +++N+ D G P + + + + V D NDN P+F + +V I EN P+GT V +L A D+D G NA++ Y L F +D SG++T +RE Y++ A D + ++S TI + + N ++ S H+ NL L + D DIG N + +++NP F++ + + + LD E + Y ++I A D G L+ + +V I + D NDN+P F EP +++ + G + T A D D +NA++VY + + T+F+++ G I L + L E I A+D GI +++ +N + ++P
Sbjct: 139 VRINVEDINDNAP----AFAAPVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVV--RKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEAS-HV--NLPVAL--ITVSDPDIGANGAVTCYIYNPEVPFQLKKLTYPNQYLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPT--YKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRP 595
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 219.935 bits (559), Expect = 2.417e-59 Identity = 200/740 (27.03%), Postives = 325/740 (43.92%), Query Frame = 3
Query: 309 LDRENLITNQKCDTSKQYNYNRDSQCILILELSGSG-PKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISP-------------------STNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYR-FNTPESIVQGQAIGQVFATDKDISSRVTIMMS-PSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQ----NNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHE--------SVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS-----PECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-------FSFHIKE--NLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDI---FVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAI---DNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQ--DEHILPDKIIISARDSG 2333
LDRE L + D + + Q + + GS + + +LV D+ND+ P+F N I+E+ V LP A DPD G N Y I SA S + + P GH + L+L+ + DRE ++L+L +D GNP L+ S+ + I + D ND+AP F R E G ++ Q+ A D D I S + + + + ++ DG +T + V + D +R+ ++A D G + +A+ TV V + D NDN P+ E+ + + + + EN S + + ++VSD D G++G V+ +L+ L S N+ + L T T D E + ++++ +D G P L+ + + V D NDN P+F VS+ EN P GT V L A D D G N I + LS E F+++ +G +T DRE + Y++ A D + + + VT+LDENDN P F+ + F ++E ++ +G V D D G NA++ L + I GD V LDRE +Y + + A D G L++S V I + D NDN+P P + T + ++ D D G+N + +Y I + IF +N G++ L +++ DE + ++++ RD G
Sbjct: 89 LDREALCMEEP-DACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRI--SAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELR--EQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDG--TTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELAS----PNKVQFLLKT--TRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWK-HVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGL--HRLVVRVRDRG 812
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 219.55 bits (558), Expect = 2.979e-58 Identity = 202/700 (28.86%), Postives = 327/700 (46.71%), Query Frame = 3
Query: 369 NRDSQCILILELS----GSGPK--FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKD-HGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP-ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEI-SRNGDIFVSQKRYLDRERVDR------YSIEIGARDHGN-RPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
+R+ ++L +S G+ PK + L + + DVND P F + + ENS V A D D G NG+V Y P + + + G K+ L+S DRE EE+ L++ A+D G+PPL S+ + + + D+ND+ P F Y + E+ G A+ V ATD D + T+ +A +F V A G +ST+V+L + Y++ + A+D G+ + + V + V D D P + + V+ EN + + V+ S D + N + D F++E ++ TA ++ DRE + +QL ++ + GV + ++V+V D N++ P+F R VSI E+ P+ ++ ++A DKD G N ++KY + E F I P G + R DRE + EY + +A D + ++SS+T++VT+LD NDN P F ++ FH E E ++G V+A D D G N + Y P FE+ S G I + R DRE + R +S + A D G +PL TV++ + D+NDN P F K ++S T++ A D D G N + Y I F ++ S G I L SL E +++SA DSG P + ++ + + + P
Sbjct: 405 DREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTG-----KVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAA--RFQVNAVTGAVSTRVSLDREERAV-YQLQVTALDGGHLRARSPAIVTITVADAQDTPPTF----ARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGG-------RIFTA--NAIDREEQAFYQLRVVANSGGVAGEAS---VSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFP-DGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGRI--ASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFA--KSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPP 1075 HSP 2 Score: 216.083 bits (549), Expect = 3.815e-57 Identity = 210/742 (28.30%), Postives = 339/742 (45.69%), Query Frame = 3
Query: 258 FQNFFRLND--NNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGP--KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-ISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS-PECLENFNIDPFSGMITTRVSFDREV------QSEYKVKATAYDHLILR-MNSSITIHVTILDENDNPPKFLRT-FSFHIKE---NLEGVLGRVEAVDKDIGQNAQMDYFL--FNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKI----FTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPP 2402
++ FRL+ V L+SLDRE L ++Y ++ + GS P ++ ++V D+NDN P F + + I EN P V A DPDRG NG+V Y + + + +F Q + + + S DRE +QL + A D G+ S + I + D D P F + Y F E++ G +G V A+ D+++ VT ++ S FS+ + G I T A+ +F Y++ ++A +SG A+ +VLVH D+N++ P+ + AS + + E+ NS V +DKD G NG+V+ ++ E F + + Y DRE ++ + L + D GV L+++ + V V D NDN P+F E +G+ V ++A D D G N + Y P+ NF +D +G I + FDRE + + A D + + T+ V + D NDNPP+F ++ + + E NL +L RV A D D G N + Y + N F + + G I + LDRE Y++ + A D G PL +S TV + + D NDN P F E LS++ ++ T++ T A D DTG + + Y I + F I+ S GS++L + L E ++ +SA D G P+++ + L ++ +R PP
Sbjct: 493 YREMFRLDSLTGKVTTLKSLDREEL---------EEY------PLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLT-AGDAARF--------QVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLI---VSGDQRGSFSIEWSGGRIFTANAIDREEQAF-YQLRVVA-NSGGVAGEASVSVLVH--DVNNHAPVFDRASYE----VSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGN--GGEKFGIFPDGQLYVRY-----ELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQV--NFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLL-RVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGS--LDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESL------LSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVH-VRDFNDNPP 1180 HSP 3 Score: 204.912 bits (520), Expect = 1.058e-53 Identity = 198/679 (29.16%), Postives = 302/679 (44.48%), Query Frame = 3
Query: 369 NRDSQCILILEL---SGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD-----GVIST-----KVALVYVSSSFDYRIPIIAVDSGNPT-LTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPT------SSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSF-HIKENLEGVLG----RVEAVDKDIGQNAQMDYFL---FNPSPLFEIS-RNGDIFVSQKRYLDRERVDR-YSIEIGARD-----HGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDE 2288
+R+ Q L + SG + +LV DVN++ P FDR ++ IAE+ P ++ A D D G NG V Y I KF + +L + DRE EE+ L + A D G PL+SS+T+ + + DVND+ P FN SSY F+ E G +G V ATD D S + S +K V F+ G I++ + AL+ + + ++A D G P L +TV V V D+NDN P + A S + ++E+ + + + +VT SD D G NG + + N N V A T S DRE + L + +D G L + + V V DENDNPP F SV LE+ +G + L A D+D G + ++Y +++ F ID +G + D E Q Y++ +A D +S+ + V + D NDNPP FL F I EN+ +G V A D D N ++ Y + F P F I +G+I + + +DRE + + + A D H R ++ V +++ D NDN+P F+ P L + G+ + T +A D D ENA + Y + + +F ++ G I + L E
Sbjct: 720 DREEQAFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPDG---------QLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYS-------FEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPP--QFAKSVY--QASVSESASNLTQLLRVTASDVDEGVNGALRYAI------------NEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIP--IGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAE--IDREVTGGLFEVTVRATDKAIPVHTRR--SALKNVTVLVTDENDNAPRFVTPT--AILVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRE 1358 HSP 4 Score: 203.371 bits (516), Expect = 3.092e-53 Identity = 193/669 (28.85%), Postives = 305/669 (45.59%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDR---LTFNFKIAENSPAHNEVELPLARDPDRGNNG--SVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLV-LTENCQSNSYIAKVTVSDKDHGN-NGQVECKLDNNYLFNLESIQNFENRRHYKL---------VTAPTSSFDREVKDHHQLNIICSDMGVP-SLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT--FSFHIKENLEGV-LGRVEAVDKDIGQNAQMDYFLFNPS------PLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIET-IQGTKIFTAKAIDNDTGENAKIVY--TIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
++ ++V DVNDN PSF + FK E++ +V L A D D G NG Y I + V P T + L L DRE + + L + A+D G+P L + + + D ND+ P F + +YR + E G A+ +D+ R +V FD G++ST+ L + + Y + + A D GNP L+ +T ++ + D+NDN P I R + E+ + A VTV+D D NG++ SI R H+ L V S DRE + L I+ SD G P + + T + V V D ND+ P F + ++ E P G+ V + A+D D G+NA+++Y ++S L F++D +G++TT DREV S + +A D + ++ VT+LD ND PP F +T + ++ +L G+ + V A D D+G+N + Y F+P +F + S G V+ + LDRE ++ Y + + A+D G+ PL S+ V +++ D+NDN P F P Q+ +E GT + T A D D G N + Y T F +N G++ SL E ++ ++A D G
Sbjct: 8 EVRVVVGDVNDNAPSFPEPGVMEVAFK--EDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAF---LHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL-------RDLLHRG------------RGPLAVPFDPKTGMVSTRQPLDF-EARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSV-----------SIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYN-FDPDMPAQYREMFRLDSLTGK--VTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFY---PVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGG 634 HSP 5 Score: 200.675 bits (509), Expect = 2.590e-52 Identity = 199/701 (28.39%), Postives = 316/701 (45.08%), Query Frame = 3
Query: 402 LSGSGPKFYQLPILVADVNDNVPSFDRLTF------NFKIAENSPAHNEVELPLARDPDRGN-NGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNP-PLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-------AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLT--ENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNY------LFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE-GVL-GRVEAVDKDIGQNAQMDYFLFNPSPLFEIS---RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI------QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
LSG QL DVNDN P+ R + + + E++ L D D NG + +I FVL +P G LK+ DRE + L ++A D G P +++ ++ + + DVNDHAP+F S+Y E G + V A D D + S S + FSV DG + +VA V + I A D G TA +++ V + D+ND P+ + V T EN ++ V+ +D D G NG V D + +F L+S+ K+ T S DRE + + L + D G P L +T +TVVV D NDN P+FY SILEN P GT VT + A D D G N ++Y L+ F ++ +G ++TRVS DRE ++ Y+++ TA D LR S + +T+ D D PP F R +SF + EN+ G L G V A D+ NA + Y + + S G IF + +DRE Y + + A G + +V +++ D+N+++P F + ++++ + ++ F+ +A D D+G+N ++ Y I + IF DG +Y+ L E + +SA D+G+ P +++ ++++ + +KP
Sbjct: 205 LSGRATAVIQL----LDVNDNDPAI-RFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAP----GVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYS-IVSGNDLGWFSVDESTGLVTTDGKVDREVASSVV-------LNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLF------TQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTG-------KVTT--LKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQRGSFSIEWSGGRIFTANA--IDREEQAFYQLRVVANSGG---VAGEASVSVLVHDVNNHAPVF--DRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIF----PDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKP 860 HSP 6 Score: 173.326 bits (438), Expect = 8.195e-44 Identity = 194/736 (26.36%), Postives = 327/736 (44.43%), Query Frame = 3
Query: 297 MLQSLDRENLITNQKCDTSKQYNYNRDSQCILI--------LELSGSGP-------KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPL-ARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFN-----TPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLV--LTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGV---PSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN----------FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN---LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRN---GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAI--DNDTGENAKIVY--TIQSQTIFYINTSDGSIYLNKSL----QDEHILPDKIIISARD 2327
+L + R + + N D + +++ ++C+ I L +G+G F Q+ I V DVNDN P F ++ EN+ EV L A D D+G N V Y++ S FV+ + +S L+ + DRE + L + A D G + L++ + D ND++P+F++ +Y F+ P+ IG V A D D VT ++PS S D AF G+ AL V+ D Y + A D G L AT+ + V+V D NDN P + QN+ L + E+ + + +++ +D D G N ++E + + + F +L A + DRE + + L + SD L++ +++++ D NDN P F +++ E+ P+G V ++A+D D G N+ ++Y L+ + E F ++ +G + DRE + Y + A D + S+ T+ VT+ D NDN P+F R + I E+ VL R+ A D D G N ++ Y + + P + + G + V+ R LDRER Y + + ARD G + + +V + + D+ND SP F H E QG + + + D+D G + ++ Y + + + DG ++L +SL Q +H+L II+A D
Sbjct: 1443 LLLGVTRGHGVIN-PLDAPWRVSFDLTARCMFIVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENT-GEGEVIFTLSATDADQGQNALVTYSVL-SGSEGAFVVDA--------ASGVLRASRRLDREERASYLLTVRASD-GTHATDARLSVAV--RDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADG---AF-GLHPVTGAL-NVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSV------QNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSG-----DPEGRFAVGNDGQLSVA--RALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAP-EDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVL-RLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVA--RPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHAR---ENTQGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPDGHVHLLRSLDREAQPQHVL----IITATD 2133 HSP 7 Score: 152.525 bits (384), Expect = 2.025e-37 Identity = 152/577 (26.34%), Postives = 249/577 (43.15%), Query Frame = 3
Query: 747 PPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP-IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL----DNNYL---FNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYD---HLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFN-----------PSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
PP++S ++I + DVND+ P F E+ +G+ I + ATD D + S ++ AF V+ ++ S D Y + + A D + T + + V V D NDN P A S + + + I V D D G G+V L D+++ F L + N VT P DRE + + L +D G L T + V V D NDN P + + E+ P GT + R+ A D D GVNA++++ +S E G ++ + DRE QS Y + D H R++S++ + + + D NDN P F S E+ + V+ V+AVD D G+N+ ++Y L F ++ G++ + R LDRE Y++ + A D G PLTS+ T+ + + D NDN+P F P+ ++ + GT++ A D D G N ++ Y I S F ++ G++ + + L E ++ + ARD G ++ T+S+ +
Sbjct: 1494 PPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYS------VLSGSEGAF--VVDAASGVLRASRRLDREERASYLLTVRASDGTHAT---DARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALN------VTRP---LDRESRACYVLRARATDGG--GLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRL--VRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRF--PRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTL 2044 HSP 8 Score: 109.383 bits (272), Expect = 2.846e-24 Identity = 123/470 (26.17%), Postives = 194/470 (41.28%), Query Frame = 3
Query: 1089 VLVHVTDINDNRP------IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENR--------RHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPP--KFL------RTFSFHIKENLEGVLGRVEAVDKD------------IGQNAQMDYFLFNPS-PLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEII--IDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ---TIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
V V V D+NDN P ++E+A E+ + T D+D G NG N++ + + S N E R + L A T DRE + L + D G P + V V+D NDNPP F + S+ E+ P+G + L + P + DP +GM++TR D E + +Y + A D ++ T + +LD NDN P +F+ R+ S V V D D +G N + + L P P + + SQ LDRER+ Y++ I A D+G +P+ S T ++ ++D+ND++P F L+ G+ + A+D D+G NAK+ Y+I S F ++ S G + + + E + ISA+D G PKT +SL + +
Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVA---------FKEDAAVGRQVLLDTAVDRDVGPNGV------NHHAYKIVS-GNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDL------------LHRGRGPLAVP---FDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLK----VASQ---LDRERIPMYNLTILASDNG-KPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPA--GSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLL 437
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 208.379 bits (529), Expect = 1.024e-54 Identity = 196/692 (28.32%), Postives = 305/692 (44.08%), Query Frame = 3
Query: 402 LSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLG-NPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDIND------NRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLG----RVEAVDKDIGQNAQMDYFLFNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSP---------TFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-FYINTSDGSIYLNKSLQ---------DEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
L+G+G + +LV D NDN+P F + E++P ++V L A D D G N + Y ++ + ++PST Q + S DRE E + L + A D G P L+SS T+ + +TDVNDH P+F + Y P S G A+ V A D D + S S S+ FSV GVI AL D + + D G P +A +TV V D + + +S+ V+ GN G V F ++ Q+ E H L D E + H++L + D G P + + V V D NDN P F + EN P T V L A+DKD G+N Q+ Y + + N F ++P SG I + + DRE + Y++ A D + ++ + +++ DENDN P+F + FS H++E + +G RV +D D G NA + + L +PS F I G+I VS R L+RE Y++++ A D T ST V I++DD+NDN+P F EP G+ L + A D D G N ++ + ++SQT F + G I+ + L+ ++ +++A D G P ++ +++ +N +
Sbjct: 6 LTGTG----TVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR---GGDGHFSVNPSTGQ-------IITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASA--GFSVDPRRGVIHAARAL--QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDV---------FAVDP-QSGEVSVHRAL--------DHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVRE--DAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVS--RRLNREDRSGYAVKVRASDPA---WTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEAL-----------VARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIV 642 HSP 2 Score: 170.244 bits (430), Expect = 6.730e-43 Identity = 179/684 (26.17%), Postives = 303/684 (44.30%), Query Frame = 3
Query: 369 NRDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREID-EEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATD--KDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRN---GDIFVSQKRYLDRERVDRYSIEIGARDHGN-RPL-TSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIV-YTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTS 2357
NR+ + +++ S P + + I+V DVNDN P F + + + E S V A D D G NG V + ++ + + F + S L+ + + ++ ++ A D G PPL+S T+ I+I N +AP+F + Y ++ G I + A D +D++ ++ + +S+ +F V G + + +L + S + + + A D G P L++ +T ++ VT+ N P ++ L L EN + S +A+VT +D D G NG + + D + LF++ LV D E + + L++ +D G + T +++ V D NDNPP+ I EN P GT V + A+D D NA Y L + F ++ +G++TT+ D E + Y++ A+++ S+ +HV I N+ P+F+ R ++F + E+ + +G V A D+D G + + Y LF S S N G+I VS + LDRER ++ + A++ G+ R V + I D ND P F H +S GT + A D D+ + + IQS F IN G I + L E + + + A D G P T T+
Sbjct: 501 NREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMR--SQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASR---RFDVDAGGFLHLRASLAGDAGSI-FSVTVEARDRGRPPLSSRATAIISVTEENQYAPRF----AHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASG-----DVLLV----GELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQ--LDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSAL--YHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTT 1160 HSP 3 Score: 158.688 bits (400), Expect = 2.816e-39 Identity = 168/655 (25.65%), Postives = 281/655 (42.90%), Query Frame = 3
Query: 468 PSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP-IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMI-TTRVSFDREVQS--------EYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGV--LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLN 2372
P F +F E+ P + + AR R G V Y + + P + + + + ++ D E ++L++ A+D G PP ++ L +++D+ D+ND+AP+F+ S + PE+ + I + A DKD I+ +V + I + F V + V+ + + Y + + A D G+PT T VL+ VTD NDN P +I S++ + E+ + +V+ D D G N + L L+ F +T + +RE + + + + SD P+ T + +T+VV D NDN P F + + E V R+ A D D G N Q+ + + + ENF + SG I + R R+ +Y TA D ++S T+ + I+ N N P+FLR +S + + + + AVD D N Q+ Y + N S F++ G F+ + L + +S+ + ARD G PL+S T I + + N +P F P L+L G+ + A D D G N IVY+I S +F I+ + G + L L E + + A D G KT S + ++
Sbjct: 230 PRFAPGPRSFSFREDQPPGTTITVVAARSSRRA--GPVSYHLASGGNLGDVFAVDPQSGE-------VSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPP-RTIVVLTAVDKDSGINGQVDYSI---IDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAH------VREDAAVGFPVLRVSTLDADEGPNAAITFSL-------LDPSLPFSIHPSTGEITV-SRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQ-TENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGG--FLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPP--LELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSIS 849 HSP 4 Score: 157.532 bits (397), Expect = 5.612e-39 Identity = 170/666 (25.53%), Postives = 283/666 (42.49%), Query Frame = 3
Query: 456 NDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNY--LFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECL-ENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRM--NSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGR----VEAVDKDIGQNAQMDYFLF---NPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQ------SQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
N N P F R ++ +A A + A DPDR NG + Y++ S +F + D+ L + S + F + + A+D G PPL+S T I +T+ N +AP+F + PE+ G ++ +V ATD D I+ S ++ S FD IS V + DY + + A D G T S V + VTD+NDN P++ + + V+ EN S + + + D D +N LD+ LF L N++ L T D E K ++L + + +T + V + N+ P F ++ + + E+ P+G V + A D+D G++ + YML E + F+++ +G I DRE ++ ++ A + +R + ++V I D ND PP F +H + + +G V A D D + FL N F I + G I V+ LDRE V Y++ + A D G P T +T V + ++D+NDN P + ++ G + +A D D N K YT Q + ++ +S G + + + E + ++ D+G P T+T +LHL+ +
Sbjct: 645 NANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDV---------DAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDG-----SGLFD--ISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNAS----DYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVL-------NQKTGVLTT--QGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSAL-YHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASP--LDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT----SSAKVTENQPAGMTVLNLEAGDPDLPPN-KGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVL 1272 HSP 5 Score: 139.043 bits (349), Expect = 2.496e-33 Identity = 143/540 (26.48%), Postives = 229/540 (42.41%), Query Frame = 3
Query: 741 GNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD------ISSRVT-----IMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSG-NPTLTATSTVLVHVTDIND------NRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEG-VLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-FYINTSDGSIYLNKSLQDE 2288
G P LT + T+ + + D ND+ P+F + R PE G + V ATD D IS R+ ++PS + QI+ S+ +G S Y + + A+D G P L++++T++V VTD+ND N P + A S+ + + + VT D D G NG + L + + + P +D L + SD G P + +TV +D + P F S S E+ P GT +T + A + F +DP SG ++ + D E Q Y++ A D ++ + + V +LD NDN P+F + F + EN + + AVDKD G N Q+DY + N +F ++ N G+I LDRE V Y + + A D G+ + V I + D NDNSP F + ++ + G + +D D G NA I +++ ++ F I+ S G I +++ L E
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPS-TGQIITTASLDREGRES-------------YVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSA----------PAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGP--------RDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEI--RSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIF---SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNRE 503 HSP 6 Score: 126.716 bits (317), Expect = 1.648e-29 Identity = 145/567 (25.57%), Postives = 233/567 (41.09%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS---PSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRP-------ITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML--SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLG--RVEAVDKDIGQN-AQMDYFLFNPSPL----FEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDN 2081
I V + N P F + EN PA + + A D D G NG++VY+I S F + S + + ++ D E ++ + L + A D G T + I +TDVND+ P N S Y PE+ G + + A D D S M S A ++++ + GV++T+ L Y + Y + + A + + +T+ V V +T +N+ P N V++E+ + + V +D+D G +G V LF + F H + +S DRE + L +I + G + R + V + D ND PP+F + E +GT V + A D D + L S F+I+ +G+I DRE Y + A D + + V + D NDN P FL T S + EN + +EA D D+ N + L P F +S +G + R +DRE+ + + + D G+ PLTS+ T+ + + D NDN
Sbjct: 743 ISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGD--------VLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKT----GVLTTQGFLDYETKQ-TYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYN----FVVSESAPVGAPVGSVFATDRDAGIDGTV-----FYMLFGESRSKGFSVNEHTGEIIV-SSQLDREREASATLRVIAKNAG-----SIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGP-FLLTSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSG--LLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN 1277 HSP 7 Score: 125.561 bits (314), Expect = 3.274e-29 Identity = 150/565 (26.55%), Postives = 239/565 (42.30%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKIL--QSF-DREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLES---IQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPF---------SGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHI----KENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTV 2051
I V DVNDN P + + I EN+P+ V + A D D +N +Y++ ++ FVL NQ K +L Q F D E + ++L + A + + S+ + + IT VN++ P+F Q Y F ES G +G VFATD+D I V M+ + S+ FSV + + VSS D + +IA ++G+ VLV+V + N P + +S+ + R ++E +++ V+ D D + + F ++S + F H L+ S DRE + L ++ DMG P T T + V ++D NDN P S + EN P G V L+A D D+ N P + DP SG++ T DRE + E+ + D + S++T+H+++LD+NDNP + R H+ G +G V D DI D P +F N +SQ R + R+ + + D + P T++ V
Sbjct: 848 ISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLD-DGEADLFVL-----NQ------KTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSK---GFSV------NEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPV-FSSALYHGR--VSEAASVGTHVVGVSAHDFDSPPGWRT-------FSFLIQSGNAGRAFSINAHTGLIVV-ASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTS--SAKVTENQPAGMTVLNLEAGDPDLPPNK------GPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSE-ARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFNCD-LTSGPFNVFSFQPNTCRLISQPRSAE----GRFELSVRGSDGKHSPATTTARV 1366 HSP 8 Score: 120.553 bits (301), Expect = 1.209e-27 Identity = 119/444 (26.80%), Postives = 189/444 (42.57%), Query Frame = 3
Query: 1056 SGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL---RTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIF--------VSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
+G P LT T TV V V D NDN P A R + E+ S +A V +D D G N + +L D ++ N + Q ++T T+S DRE ++ + L + D G P L+++ + V V D ND+ P F + P GT V + A D D G N +++ LS F++DP G+I + + + + + D ++ T+ V D + P+F R+FSF + + V A + + + Y L + L GD+F VS R LD E Y + + ARD G P ++ +E+ + DINDN+P F + E I A+D D+G N ++ Y+I I F +N + G I +L E++ ++ + A D G
Sbjct: 1 AGEPRLTGTGTVTVLVEDENDNLPRFGAA----ELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQ---------IIT--TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNL------GDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSR---FWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRG 416 HSP 9 Score: 110.538 bits (275), Expect = 1.640e-24 Identity = 97/335 (28.96%), Postives = 158/335 (47.16%), Query Frame = 3
Query: 1404 GVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHL-ILRMNSSITIHVTILDENDNPPKFLRT--FSFHIKENLEG-VLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT----IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
G P LT T +TV+V+DENDN P F ++ E+ PIG+ V + A D D G+NA I Y L +F+++P +G I T S DRE + Y ++ TA D ++SS T+ V + D ND+ P+FL ++ G + V A D D G N + + L + S F + R G I + R L R D ++ + D G P ++ TTV + D + P F P P + + + GT I A + + Y + S +F ++ G + ++++L E+ ++++ ARDSG P + L ++ +
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR-GGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAA--RALQGPR-DDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFA-PGP-RSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVL 327 HSP 10 Score: 93.9745 bits (232), Expect = 1.852e-19 Identity = 93/359 (25.91%), Postives = 153/359 (42.62%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPL--TSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAP----TSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNP 1469
Q+ + + VN+ P F + +NF ++E++P V A D D G +G+V Y + + S F + ++ + ++ + DRE + L +IAK+ G+ + + + ITD ND P F+ + Y E+ G + V A D D S FS I+ L+ V+S D Y + ++AVD G P T T+ V+V + D+NDN P + +S+ +TEN + + + D D N Y F L + R ++ L ++ DRE K L + +D G P LT+T + + V D+NDNP
Sbjct: 949 QVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSV--------NEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFS------INAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAK------VTENQPAGMTVLNLEAGDPDLPPN-------KGPYTFQLLG-SDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 208.379 bits (529), Expect = 1.171e-54 Identity = 196/692 (28.32%), Postives = 305/692 (44.08%), Query Frame = 3
Query: 402 LSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLG-NPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDIND------NRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLG----RVEAVDKDIGQNAQMDYFLFNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSP---------TFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-FYINTSDGSIYLNKSLQ---------DEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
L+G+G + +LV D NDN+P F + E++P ++V L A D D G N + Y ++ + ++PST Q + S DRE E + L + A D G P L+SS T+ + +TDVNDH P+F + Y P S G A+ V A D D + S S S+ FSV GVI AL D + + D G P +A +TV V D + + +S+ V+ GN G V F ++ Q+ E H L D E + H++L + D G P + + V V D NDN P F + EN P T V L A+DKD G+N Q+ Y + + N F ++P SG I + + DRE + Y++ A D + ++ + +++ DENDN P+F + FS H++E + +G RV +D D G NA + + L +PS F I G+I VS R L+RE Y++++ A D T ST V I++DD+NDN+P F EP G+ L + A D D G N ++ + ++SQT F + G I+ + L+ ++ +++A D G P ++ +++ +N +
Sbjct: 6 LTGTG----TVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR---GGDGHFSVNPSTGQ-------IITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASA--GFSVDPRRGVIHAARAL--QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDV---------FAVDP-QSGEVSVHRAL--------DHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVRE--DAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVS--RRLNREDRSGYAVKVRASDPA---WTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEAL-----------VARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIV 642 HSP 2 Score: 170.244 bits (430), Expect = 6.925e-43 Identity = 179/684 (26.17%), Postives = 303/684 (44.30%), Query Frame = 3
Query: 369 NRDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREID-EEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATD--KDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRN---GDIFVSQKRYLDRERVDRYSIEIGARDHGN-RPL-TSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIV-YTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTS 2357
NR+ + +++ S P + + I+V DVNDN P F + + + E S V A D D G NG V + ++ + + F + S L+ + + ++ ++ A D G PPL+S T+ I+I N +AP+F + Y ++ G I + A D +D++ ++ + +S+ +F V G + + +L + S + + + A D G P L++ +T ++ VT+ N P ++ L L EN + S +A+VT +D D G NG + + D + LF++ LV D E + + L++ +D G + T +++ V D NDNPP+ I EN P GT V + A+D D NA Y L + F ++ +G++TT+ D E + Y++ A+++ S+ +HV I N+ P+F+ R ++F + E+ + +G V A D+D G + + Y LF S S N G+I VS + LDRER ++ + A++ G+ R V + I D ND P F H +S GT + A D D+ + + IQS F IN G I + L E + + + A D G P T T+
Sbjct: 501 NREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMR--SQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASR---RFDVDAGGFLHLRASLAGDAGSI-FSVTVEARDRGRPPLSSRATAIISVTEENQYAPRF----AHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASG-----DVLLV----GELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQ--LDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSAL--YHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTT 1160 HSP 3 Score: 158.688 bits (400), Expect = 2.799e-39 Identity = 168/655 (25.65%), Postives = 281/655 (42.90%), Query Frame = 3
Query: 468 PSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP-IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMI-TTRVSFDREVQS--------EYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGV--LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLN 2372
P F +F E+ P + + AR R G V Y + + P + + + + ++ D E ++L++ A+D G PP ++ L +++D+ D+ND+AP+F+ S + PE+ + I + A DKD I+ +V + I + F V + V+ + + Y + + A D G+PT T VL+ VTD NDN P +I S++ + E+ + +V+ D D G N + L L+ F +T + +RE + + + + SD P+ T + +T+VV D NDN P F + + E V R+ A D D G N Q+ + + + ENF + SG I + R R+ +Y TA D ++S T+ + I+ N N P+FLR +S + + + + AVD D N Q+ Y + N S F++ G F+ + L + +S+ + ARD G PL+S T I + + N +P F P L+L G+ + A D D G N IVY+I S +F I+ + G + L L E + + A D G KT S + ++
Sbjct: 230 PRFAPGPRSFSFREDQPPGTTITVVAARSSRRA--GPVSYHLASGGNLGDVFAVDPQSGE-------VSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPP-RTIVVLTAVDKDSGINGQVDYSI---IDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAH------VREDAAVGFPVLRVSTLDADEGPNAAITFSL-------LDPSLPFSIHPSTGEITV-SRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQ-TENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGG--FLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPP--LELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSIS 849 HSP 4 Score: 157.532 bits (397), Expect = 6.285e-39 Identity = 170/666 (25.53%), Postives = 283/666 (42.49%), Query Frame = 3
Query: 456 NDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNY--LFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECL-ENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRM--NSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGR----VEAVDKDIGQNAQMDYFLF---NPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQ------SQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
N N P F R ++ +A A + A DPDR NG + Y++ S +F + D+ L + S + F + + A+D G PPL+S T I +T+ N +AP+F + PE+ G ++ +V ATD D I+ S ++ S FD IS V + DY + + A D G T S V + VTD+NDN P++ + + V+ EN S + + + D D +N LD+ LF L N++ L T D E K ++L + + +T + V + N+ P F ++ + + E+ P+G V + A D+D G++ + YML E + F+++ +G I DRE ++ ++ A + +R + ++V I D ND PP F +H + + +G V A D D + FL N F I + G I V+ LDRE V Y++ + A D G P T +T V + ++D+NDN P + ++ G + +A D D N K YT Q + ++ +S G + + + E + ++ D+G P T+T +LHL+ +
Sbjct: 645 NANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDV---------DAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDG-----SGLFD--ISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNAS----DYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVL-------NQKTGVLTT--QGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSAL-YHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASP--LDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT----SSAKVTENQPAGMTVLNLEAGDPDLPPN-KGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVL 1272 HSP 5 Score: 139.043 bits (349), Expect = 2.700e-33 Identity = 143/540 (26.48%), Postives = 229/540 (42.41%), Query Frame = 3
Query: 741 GNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD------ISSRVT-----IMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSG-NPTLTATSTVLVHVTDIND------NRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEG-VLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-FYINTSDGSIYLNKSLQDE 2288
G P LT + T+ + + D ND+ P+F + R PE G + V ATD D IS R+ ++PS + QI+ S+ +G S Y + + A+D G P L++++T++V VTD+ND N P + A S+ + + + VT D D G NG + L + + + P +D L + SD G P + +TV +D + P F S S E+ P GT +T + A + F +DP SG ++ + D E Q Y++ A D ++ + + V +LD NDN P+F + F + EN + + AVDKD G N Q+DY + N +F ++ N G+I LDRE V Y + + A D G+ + V I + D NDNSP F + ++ + G + +D D G NA I +++ ++ F I+ S G I +++ L E
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPS-TGQIITTASLDREGRES-------------YVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSA----------PAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGP--------RDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEI--RSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIF---SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNRE 503 HSP 6 Score: 126.716 bits (317), Expect = 1.843e-29 Identity = 145/567 (25.57%), Postives = 233/567 (41.09%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS---PSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRP-------ITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML--SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLG--RVEAVDKDIGQN-AQMDYFLFNPSPL----FEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDN 2081
I V + N P F + EN PA + + A D D G NG++VY+I S F + +S + ++ D E ++ + L + A D G T + I +TDVND+ P N S Y PE+ G + + A D D S M S A ++++ + GV++T+ L Y + Y + + A + + +T+ V V +T +N+ P N V++E+ + + V +D+D G +G V LF + F H + +S DRE + L +I + G + R + V + D ND PP+F + E +GT V + A D D + L S F+I+ +G+I DRE Y + A D + + V + D NDN P FL T S + EN + +EA D D+ N + L P F +S +G + R +DRE+ + + + D G+ PLTS+ T+ + + D NDN
Sbjct: 743 ISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDI--------SRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKT----GVLTTQGFLDYETKQ-TYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYN----FVVSESAPVGAPVGSVFATDRDAGIDGTV-----FYMLFGESRSKGFSVNEHTGEIIV-SSQLDREREASATLRVIAKNAG-----SIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGP-FLLTSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSG--LLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN 1277 HSP 7 Score: 125.561 bits (314), Expect = 3.853e-29 Identity = 150/565 (26.55%), Postives = 239/565 (42.30%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKIL--QSF-DREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYR------IPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLES---IQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPF---------SGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHI----KENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTV 2051
I V DVNDN P + + I EN+P+ V + A D D +N +Y++ ++ FVL NQ K +L Q F D E + ++L + A + + S+ + + IT VN++ P+F Q Y F ES G +G VFATD+D I V M+ + S+ FSV + + VSS D + +IA ++G+ VLV+V + N P + +S+ + R ++E +++ V+ D D + + F ++S + F H L+ S DRE + L ++ DMG P T T + V ++D NDN P S + EN P G V L+A D D+ N P + DP SG++ T DRE + E+ + D + S++T+H+++LD+NDNP + R H+ G +G V D DI D P +F N +SQ R + R+ + + D + P T++ V
Sbjct: 848 ISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLD-DGEADLFVL-----NQ------KTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSK---GFSV------NEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPV-FSSALYHGR--VSEAASVGTHVVGVSAHDFDSPPGWRT-------FSFLIQSGNAGRAFSINAHTGLIVV-ASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTS--SAKVTENQPAGMTVLNLEAGDPDLPPNK------GPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSE-ARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFNCD-LTSGPFNVFSFQPNTCRLISQPRSAE----GRFELSVRGSDGKHSPATTTARV 1366 HSP 8 Score: 120.553 bits (301), Expect = 1.242e-27 Identity = 119/444 (26.80%), Postives = 189/444 (42.57%), Query Frame = 3
Query: 1056 SGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMG-VPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL---RTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIF--------VSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
+G P LT T TV V V D NDN P A R + E+ S +A V +D D G N + +L D ++ N + Q ++T T+S DRE ++ + L + D G P L+++ + V V D ND+ P F + P GT V + A D D G N +++ LS F++DP G+I + + + + + D ++ T+ V D + P+F R+FSF + + V A + + + Y L + L GD+F VS R LD E Y + + ARD G P ++ +E+ + DINDN+P F + E I A+D D+G N ++ Y+I I F +N + G I +L E++ ++ + A D G
Sbjct: 1 AGEPRLTGTGTVTVLVEDENDNLPRFGAA----ELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQ---------IIT--TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNL------GDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSR---FWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRG 416 HSP 9 Score: 110.153 bits (274), Expect = 1.757e-24 Identity = 97/335 (28.96%), Postives = 158/335 (47.16%), Query Frame = 3
Query: 1404 GVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHL-ILRMNSSITIHVTILDENDNPPKFLRT--FSFHIKENLEG-VLGRVEAVDKDIGQNAQMDYFL-FNPSPLFEIS-RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT----IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
G P LT T +TV+V+DENDN P F ++ E+ PIG+ V + A D D G+NA I Y L +F+++P +G I T S DRE + Y ++ TA D ++SS T+ V + D ND+ P+FL ++ G + V A D D G N + + L + S F + R G I + R L R D ++ + D G P ++ TTV + D + P F P P + + + GT I A + + Y + S +F ++ G + ++++L E+ ++++ ARDSG P + L ++ +
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR-GGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAA--RALQGPR-DDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFA-PGP-RSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVL 327 HSP 10 Score: 93.5893 bits (231), Expect = 2.036e-19 Identity = 93/359 (25.91%), Postives = 153/359 (42.62%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPL--TSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAP----TSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNP 1469
Q+ + + VN+ P F + +NF ++E++P V A D D G +G+V Y + + S F + ++ + ++ + DRE + L +IAK+ G+ + + + ITD ND P F+ + Y E+ G + V A D D S FS I+ L+ V+S D Y + ++AVD G P T T+ V+V + D+NDN P + +S+ +TEN + + + D D N Y F L + R ++ L ++ DRE K L + +D G P LT+T + + V D+NDNP
Sbjct: 949 QVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSV--------NEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFS------INAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAK------VTENQPAGMTVLNLEAGDPDLPPN-------KGPYTFQLLG-SDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 256.144 bits (653), Expect = 1.151e-69 Identity = 217/653 (33.23%), Postives = 318/653 (48.70%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISS----RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVY-VSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIA--SSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPEC-LENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKE--NLEGVLGRVEAVDKDIGQNAQMDYFLFNPSP----LFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
+ V D+NDN P F L + +I E+ + + A DPD GNNG+V Y I + F L + + G S+L + + DRE + +QL + A D G P L I I I D NDHAP F Q+SY + E+ G +I +V A D+D S + I S+ I D S GVI TK L + V +S+ + +IA D G P+ +TV ++V D NDN P ++I + ++ + +EN N+ IA + V+DKD N Q E K+ D+ F +E + + + L DRE+ + L + +D GVPS +T + + V D NDN P F + +I E G+ V +L A D D G N + Y ++ L F +D SG++TT DRE S + TA DH S T+ VTI+D NDN P+F++ ++ I E ++ + +V A D D G N ++ Y + + LFE++ + + K LDRE YS + A+DHG+ L SS VE+ I DINDN+P F P ++ +E K+ A D D G NA I Y I + F I++S G I SL E +IISA+D G
Sbjct: 83 VQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTG--STLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSST--GVIRTKQNLDFEVKNSYTFN--VIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPL--------DRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWT-KSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFY---PVEYFASIMENEPPGKLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGG 717 HSP 2 Score: 193.741 bits (491), Expect = 5.137e-50 Identity = 195/691 (28.22%), Postives = 331/691 (47.90%), Query Frame = 3
Query: 390 LILELSGSGPKFYQ----LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDRE------VQSEYKVKATA-YDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKE-NLEGV-LGRVEAVDKDIGQNAQMDYFLFNPSPL---FEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
LI+ G K+ + + V + DN+P F +NF + EN P V A D+ NGS+ YAI +N F++ S + +KI DRE ++ L +IA+ PL++ T+ I++ D ND+APQF+ SS + + + GQ + A D D + +++++ + + + GVI L + Y + ++A DSG+P ST+ +H+T ++ P ++S + VL S + V V D+D G NGQ+ + L I F + Y S + +K + L + +D GVPS + + P+T+ ++D ND+ +F ++ EN GT V L A D I Y ++S E +F +D SG ITTRV DRE + Y ++A A Y+ ++ + +I I VT+ D NDN P F R ++ + E +L G + R++A+D D G NA+ Y L + + + F S G++ +S + LDRE Y++ + A D N L S+ +EI + D ND P F P+ +N++ + + G+ + A D D G+N I Y+I + +F + ++ G + + KSL E ++ I+A+D G+IP ++T ++ +N + + P
Sbjct: 709 LIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDK--NGSISYAIVSGDPTNLFLVDS--------TGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWIN-STSGVIKLARKLTDGDET-QYTVQVLASDSGSPP--QHSTMTIHITLSINHPPKFTLSSYVTH---VLASQPLSYQFFYVVAV-DQDSGKNGQLFYSIPQGNEEGLFGI--FPGGKLYI-----RKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSES--HFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVI-VTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLS--KTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVF--PESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAP 1367 HSP 3 Score: 185.652 bits (470), Expect = 1.943e-47 Identity = 180/666 (27.03%), Postives = 297/666 (44.59%), Query Frame = 3
Query: 405 SGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAF-DGVISTKV-----ALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENLEGV--LGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIF-VSQKRYLDRERV----DRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEP---KPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPD-----KIIISARDSG 2333
SGS P+ + I + ++ P F ++ + + P + +A D D G NG + Y+I P I P KL I +S + + + LI+ A D G P ++S+ + I I D NDH F +++RF E+ G +G + A D S I+ S +S F+V G I+T+V L+ + S Y + A+ + + V+V VTD+NDN P+ A + ++E S + ++ D D G+N + L + + I + H + + DRE + L + +D +L +T I + V D ND P+F +V+I E+ IG+ V L A DKDIG N IKY +S L F+++ +G + S D E Y++ TA DH ++ ++S++ + V +LD NDN P F + + ++EN+ +GR A D+D G NA + + +++ +P S N ++ +D E + D + + + A D G+ L++ ++ + + D NDNSP F+ P G LN + T A D D N K+ Y+I S Y N + LQ H +PD ++ I A D G
Sbjct: 923 SGSPPQHSTMTIHITLSINHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSI-PQGNEEGLFGIFPGG--------KLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSES---HFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVY----AITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHL------SKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLN----------VMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPST----GQLQMIHQIPDNPTIYQLTIQASDGG 1552 HSP 4 Score: 163.31 bits (412), Expect = 1.544e-40 Identity = 134/462 (29.00%), Postives = 210/462 (45.45%), Query Frame = 3
Query: 1086 TVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN---FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPP-------------KFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNP--SPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
+V V V DINDN P L + E+ N+ T +D D GNNG V+ + DN F+L + + P DRE D +QLNI +D G P+L I + + DEND+ P+F + SI EN G + R+ A D+D G N IKY + + +++ F++D +G+I T+ + D EV++ Y A D + N T+ + +LD NDN P K +R+ + I N+ +L DKD N+Q + + N F++ G F+ ++ LDRE V Y++ + D G ++ V I + D+NDNSP F N+S G+ + A D D G+N + Y+I F ++ G + K L E + I I+A+D G PKT ++++ + I +KP
Sbjct: 80 SVQVQVDDINDNEPRFPTLYYT----LRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKP---LDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYIL----VTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFT--SNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKP 528 HSP 5 Score: 153.68 bits (387), Expect = 1.304e-37 Identity = 166/684 (24.27%), Postives = 301/684 (44.01%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNY--LFNLESIQNFENRRHYKLVTAPTSSFDREVKD----HHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENLE-GVL-GRVEAVDKDIGQNAQMDYFLFNPSPLFEIS-RNGDIFVSQKRYLDRERVDR------YSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
++ + ++D+NDN P F + + I EN P +++ A D D G N + Y I + F + S S+ + L S D E++E F LI+ AKD GN + + + + + D+ P F Y F E++ +G +G+V+AT KD + ++ + + + ++ + ++ ++ D Y + +IA L+A +TV + V D NDN P +S + + + D D G NG V +L +N L + S T+ R++ D + + ++ SD G P +T I + + ++PP F +L + P+ + + A+D+D G N Q+ Y + P+ E F I P G + R S + ++ Y + A D + ++S+ + + I D ND+ F+ TF F + EN G L G + A D + + Y L + F + R+G I + + LDRE + + Y ++ A + V + + D+NDN+P F + + +S ++ G+ +F KA+D D G+NAK Y++ S T F+IN+S G ++L+K+L E +++ A D+ +T+ + + S +P
Sbjct: 622 KVELTISDINDNAPVFYPVEYFASIMENEPPGKLLQV-TATDADEGTNAVISYDIIGGNNNGNFSIDS--------STGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNLF---------LVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSV----IVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINS-------------TSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSI--NHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSI-PQGNEEGLFGIFP-GGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSESHFAVDVRSGQI--TTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVF--SRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRP 1262 HSP 6 Score: 152.14 bits (383), Expect = 3.392e-37 Identity = 158/580 (27.24%), Postives = 253/580 (43.62%), Query Frame = 3
Query: 690 DREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRL-VLTENCQSNSYIAKVTVSDKDHGNNGQVECKLD-----NNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPP----IFYRQHESVSIL--ENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSG--MITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKE---NLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPL--FEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQ-----TIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
DRE + L L + N P++ +++ + D+ND+ P+F Y ES+ ATD D + T+ + AS FS+ + V D Y++ I A D G P L + + + D ND+ P+ QN+ L + EN + I +V+ +D+D G+NG ++ +D +N +F+L+S + + D EVK+ + N+I SD GVPS +T+ V D NDN P + H + EN I T + + DKD N+Q + ++ E F ++ F G I + DRE+ Y + D + ++ + + + D NDN P F ++ +I E N VL ++ A D D G N + Y + + L F++ + V+ + LDRE+V +I I A+DHG+ P T STTV + I D NDN P F+ K +S G + A D D+G+N +I Y I S +F +NT G ++ L E + A+D G
Sbjct: 58 DRETTTQISLQLRTLNPSNQPIS----VQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTI-ASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVF-----TQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQ---------NLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVE-FLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVL-QLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGL-VTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFM--KSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHG 613 HSP 7 Score: 112.849 bits (281), Expect = 4.320e-25 Identity = 135/536 (25.19%), Postives = 230/536 (42.91%), Query Frame = 3
Query: 210 NVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFY---QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDK-FSVAFDGVISTKVALVYV----SSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP--IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL--DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLE-NFNIDPFSGMITTRVSFDRE-VQSEYKVKATAYDHLILRM-NSSITIHVTILDEN 1772
N K + + +D F F + + + ++LDRE T+ YN +++ S Y ++ I V D ND P F + I E++ + V A D D G NG + Y+I ++ F + S ++ +L + +S D E + ++L + A+D G PL+S++ + +++ DVND+AP F E++ G +G+ A+D+D + I S SQ K FSV T +A + + + +++ ++A D G+P L+ ++ V VTD NDN P + A++ ++ V+T +T D D +NG+V + NN FNL H ++ PT +QL I SD G PS T ++V + P F S+ EN GT V + A +N I+Y L+ + + F + +G++ T DRE + + + + A D SS T+ +T+ D N
Sbjct: 1191 NAKFFYSLVSGTGMDKF--FINSSTGELHLSKTLDRE---------TTSSYN-------LVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVES--------ATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFS--MYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLNVMT-----------ITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIH-QIPDNPT---------IYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 246.899 bits (629), Expect = 1.350e-66 Identity = 206/675 (30.52%), Postives = 317/675 (46.96%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECK-LDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS----QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKK 2417
+ L I V DVNDN P F+R + I E+ + V A D D G+NG V Y I S N I + S + +++ DRE + L + A+D GNPP ++++T+KI + DVND PQF++ Y E + Q + V ATD D S + S M+ FS+ +G + K L Y + + + A D G P L +TV + + D+NDN P + SS + + ++ EN +V DKDHG NG++ + N+ F++ EN + DRE I D GVP T IT+ + D NDNPP F ++ SI EN GT V ++KAID D G + ++S + F I+P G+IT + + + Y +A D + ++S+ ++V + D N + P+F R++S +KE+ L + V A D+D G NA++ Y + P F + + + LDRE+VD Y E+ A DHG L + + V I I D+NDN P F+ KP + + G ++ A D D G+NA+I+Y+ S Q F I+++ G I K L E I ++ + A D G P +S+ + I PP+ +K
Sbjct: 111 YMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIG-------EVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFE-IVSGNDMNFFSINRINGEVRVKQKLDYEMIGV-FNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAP--QFVSS--HFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSIN-----ENTGGISI----KEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINP-QGLITLSCTLNYNTKHVYVFSVSASDGM---LSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGV-IKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFL--KPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPG--QASVKVKVILEDVKDSPPLFEK 754 HSP 2 Score: 180.644 bits (457), Expect = 7.007e-46 Identity = 183/644 (28.42%), Postives = 283/644 (43.94%), Query Frame = 3
Query: 459 DNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSA--VSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQ--NFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE---GVLGRVEAVDKDIGQNAQMDYFLFNPSP---LFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI-FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGI 2336
+N P F RL + ++E++ V A DPD G+NG + Y++ PS +S + I T + + DRE + + A+D G P L + + I++ DVND+ P F ++ Y + PE G + V A+D D S + S FS+ G +S V V D Y + + A D GNP +AT TV + + D+ND P S + + E+ N + V +D D G+NG+V ++ + N SI N E R KL D E+ L + D G P L + + + D NDN P F H I EN +G + R++A DKD G N +I + L F+I+ +G I+ + DRE ++ A D + + I +T+LD NDNPPKF + + I EN VL +V+A+D D G + Y + + S F I+ G I +S + + V Y + A D L+S+ V + + D N ++P F + + + GT + T A D DTG NAKI Y+I + F ++ + G I SL E + + ++A D GI
Sbjct: 15 NNPPQFSRLQEDASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGV-------ITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSI---GEVSGAVT---VMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQF----SKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKL--------DYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLP-FSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVL-QVKAIDPDSGPT-NVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTKHV--YVFSVSASDG---MLSSTALVYVNVTDSNTHAPEF--KRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGI 623 HSP 3 Score: 171.4 bits (433), Expect = 5.880e-43 Identity = 183/725 (25.24%), Postives = 314/725 (43.31%), Query Frame = 3
Query: 255 NFQNFFRLN--DNNVEMLQSLDRE-----NLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSP--ECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENL--EGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIE--TIQGTKIFTAKAIDNDTGENAKIVYTIQ---SQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
N NFF +N + V + Q LD E NL+ + D + + YN+ + + I + DVNDN P F F I EN E A D D G NG + ++ + + S + N G + I + DRE +F + A+D G P + I I + D+ND+ P+F+Q Y + E+ G ++ QV A D D S ++ S +SS F + G+I+ L Y + + + +V + + L++T+ V V+VTD N + P + S + + E+ + + V +D+D G+N ++ +++ ++ + V S DRE D ++ + +D G+P L + + + D NDN P+F + + E++ G +V + A D DIG NAQI Y + + F ID G+I T DRE EY++ A D +S+ + V + D D+PP F + + + E+ + V+A +D+ M Y + N +F+I+ N G I K LD E Y + + A P + TTV + + DINDN+P H+N++++ + + A D D + K+ + + ++ +N + G + +NK L P I I+ D G+ + T S+ +
Sbjct: 277 NDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQ-DKGQPFLYNQTT-----------------VDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLP-----FSINENTG-----GISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPD-SGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTK----HVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAE----VKEDASLGTSVLTVLATDRDTGSNAKIS--------YSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMK--LDYETQSEYRLTVRATLS---PFFTETTVMVYLKDINDNTPVL----EAFHMNINVQEGKVPPEARYKIPAYDPDVSD--KLTFKVMEGNAKEWVTLNATSGELSVNKKLIQAS-KPANIKIAVTD-GLRTASATGSIMM 943 HSP 4 Score: 162.155 bits (409), Expect = 4.127e-40 Identity = 123/419 (29.36%), Postives = 205/419 (48.93%), Query Frame = 3
Query: 1170 LTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKL-----VTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI--ETIQGTKIFTAKAIDNDTGENAKIVYT-IQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFI 2378
++E+ + + +A V+ SD D G+NG + +++ QN + ++ + V DRE D H + D G PSL +T+ V D NDN PIF R + I E+ IG V ++A D D G N ++KY + +N F+I SG +T DRE Y ++ A D ++++T+ +T+LD ND P+F + +S I+E+ + ++ V A D D G N ++ + + N F I+R NG++ V QK LD E + +++ + A+D G L + TTV+I + D+NDN+P F+ H I G + + +A D D G N +I ++ +Q+ F IN + G I + + L E + I ARD G+ K T+ + + +
Sbjct: 29 VSEDAEVGTVVATVSASDPDSGSNGMIR--------YSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQK--LDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVS----SHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLL 433
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 242.662 bits (618), Expect = 2.279e-65 Identity = 219/746 (29.36%), Postives = 342/746 (45.84%), Query Frame = 3
Query: 168 CVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDR--ENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQ---LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKD---------HGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGV--LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFI--EPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI--QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
C V EN V +C V T D + N + + + N M ++DR + T D +Y + I GS +F + I +AD NDN P+F + F I+E+SP V A D D G NG+V YAI N F L S L + + DRE + L++ A D G+P + + +I + + DVND+AP+F +S + E + QV DKD S I +S S D F++ G + +K L Y +++ Y++ + A D G+P+ +AT+ V + + ++NDN P S Q + E+ N+++ K+ +D D GN G +F+ + L++ DRE ++ L + ++ G + T+ V D NDN P+F + S+ ENLPIG V ++ A D+D G NA++ Y LS F ++P +G++TT+ DRE Q+ Y ++ TA DH ++ I +TI D NDN P+F ++ ++ + EN + RV A D D G N ++ Y + N F I S G I V +DRE + Y++ I A+D G P S+ V I + D NDNSP F E G +SI G+++ A D D G NA++ Y+I + F IN +G + + K + E + + I A D G
Sbjct: 692 CTVGENLAAGVAVCYVTATDAD----SGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASY-----SLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPS-RFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQL--------DPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGS--DNFTIDSTGFVLSKTPLDYETTAA-YQLTVTARDGGSPSKSATAQVKITIINVNDNVP--SFVSPAQVTSI--PEDVAINTHVVKLNATDSDGTPLTFDIVEGNAGS-----------------SFKIDQSSGLISV-AKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVG--VVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSI----GSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRG 1388 HSP 2 Score: 227.254 bits (578), Expect = 1.849e-60 Identity = 210/711 (29.54%), Postives = 315/711 (44.30%), Query Frame = 3
Query: 336 QKCDTSKQYNYNRDSQCILILELSGSGPKFYQ-LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISS--RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSF---------------DREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKI-FTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
++ D NY + + E G Y I V DVNDN P F+ ++ + EN P V A D D G N V Y + S KF ++P+T + + DRE + L + A D G P ++ I + I D+ND++PQF+QS Y E+ G I +V A+D D + RVT + S + F + T V +V + Y + I A DSG P +T+ V + V D NDN PI +SN+ + + E S +A VT +D+D G+N QV Y +V TS+F +RE + L I SD G P +T+ + +TVVV D NDNPP+F Q S+ EN T V + A D D+G NA ++Y ++S + F I+ SG+I T D E +S+Y ++ TA D + + + + +++ ND P F + ++ ++EN + +V A D+D + S F I + I +S LDRE V Y+I++ D GN PL++ T V I I D NDNSP F + +E + F A D D G NA+I Y + F I S G I L + L E+ + I ARD G P+ ++ ++ + I +P
Sbjct: 1055 KRLDRETTANY---TLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTS-KF-EVNPATGL-------VTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSI---ISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIF---ASNETS-YGIDEGVSIGSRVAVVTATDRDEGSNAQV----------------------FYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGI-ISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSI---LENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP 1717 HSP 3 Score: 214.542 bits (545), Expect = 1.756e-56 Identity = 190/690 (27.54%), Postives = 322/690 (46.67%), Query Frame = 3
Query: 372 RDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVE---CKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEP----KPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
+DS + I G F L I V DVNDN P F + + E+ + V A D D G N + Y++ S ++ F + DS ++ +FDRE +Q+ L A+D G+P + T++I+I DVND+ P F+ + Y + E + G A+ V A+DKD + + S + S F++ A GV++ +L + S Y + + D G+P LT TS +L++V DINDN P+ ++ + EN + + +V+ +D+D NG + K +++ +F ++ + +P D E K + L + D GVP T +T+ ++D ND+ P+F + S I E+ IG+ V + A D D G +++Y ++S FNID SG I DRE Y ++ A D +SS + + + D NDN P F + F + E+ +G+V A D D N + Y L + + +F I+ + + ++ K LD E+ +Y + + A+D G +S T V++++DD+NDN P F + G++L G + A D D+G N KI Y+I S F ++ G I L E I + I+A D ++ ++++++ ++P
Sbjct: 135 KDSYTMRISAFDGKHTTFVPL-ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLV-SGDTSYFTV---------DSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFT-SGNTNHAFTLDAVTGVVTVSRSLDFEQRS-SYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSR----VKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGI-----ISIAKSP----DYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGL-ITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENL------AAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQP 788 HSP 4 Score: 211.846 bits (538), Expect = 1.438e-55 Identity = 195/645 (30.23%), Postives = 302/645 (46.82%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN-FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENLEGVLGR----VEAVDKDIGQNAQMDYFLF--NPSPLFEISRN-GDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT-IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
I V D NDN P F ++ F I EN+PA +V + A D D G N ++ Y++ NKF++ S + +++ + D E + + + + A D + +T+ DVND+AP F S Y+ E + G + Q+ A D D+ + +S S S F+V GVI TK A + + Y++ + A D G+P+ + +TV + + D+NDNRP+ A + + E+ + + VT SDKD+GNN + + N+ F L+++ V + S D E + + L + +D G P LT T + + V D NDNPP+F + EN P GT+V+ A D+D N + + + + F ID +G+I+ S D E ++ Y + A D + + + + I D ND+ P F +S I E+ V+G V A D D G +++Y L N F I N G I VS + LDRE YS+++ ARD G+ +SST V I + DINDNSP F P +S + G +I A D D N + Y + T +F INTS G I L L E + ++A+D G
Sbjct: 58 IDVKDENDNAPEFPLNSYVFNIRENTPAA-QVAIVTATDRDSGTNAAITYSLFSG--ENKFMMNSKTG--------EIRTVTPLDHETKDSYTMRISAFDGKHTTFVPLITVD----DVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVG--INARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKA-SYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTAS----VDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTG---------VVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQVS---ATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPEST--VIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSE--LDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP---YVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGG 661 HSP 5 Score: 177.178 bits (448), Expect = 7.165e-45 Identity = 177/562 (31.49%), Postives = 268/562 (47.69%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFH--IKENL--EGVLGRVEAVDKDIGQNAQMDYFLFN--PSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTF 2093
+ I VAD NDN P F ++ I E + V + A D D G+N V Y+I S F + + L +K + +RE + L + A D G+P +TS + + + DVND+ P FN SY + E+ Q ++ V A D D+ + + S S +F + + GVI T L + S Y + + A DS TA + V + V ++ND P A + QN + EN +++ + KV+ SD+D + L + + +S + ++R + TA DRE+ + + + +D G P L+ +T+ + DENDN P F S SILEN + +L A D D G NA+I Y LS + F I SG+IT DRE +S Y + A DH SSITI VT++D ND+ P + + S ++EN E + R+ A D D G NA++ + L + +F + + GDI S K LDRE+ Y++ IG D GN L+S V I + D +DN P F
Sbjct: 1294 VAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTS-AFAI------NAMNGVLTVK--KEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSI-ISGNDEKRFKINSTSGVIMTTTPLDFEEKS-QYGLEVTATDS---KYTAKTNVTIRVINLNDITP----AFTQQNYTASVRENSPTSTSVVKVSASDRDSFGS------LSYSIVGGKDSDKFSIDQRSGIISTADV--LDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRN--DAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP-LINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDI--STKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRF 1824 HSP 6 Score: 166.777 bits (421), Expect = 1.129e-41 Identity = 154/565 (27.26%), Postives = 256/565 (45.31%), Query Frame = 3
Query: 681 QSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML-SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARD 2327
+ FDRE + ++L ++A+D N + ID+ D ND+AP+F +SY FN E+ Q + V ATD+D + I S FS ++++K + + D Y + I A D + T L+ V D+NDN P ++ + + E+ S + ++T D D G N ++ L D +Y F ++S + V +FDRE K +Q+ + D G PS + + + + D NDN P+F + S+ E++ IG + + A DKD G NA ++Y S F +D +G++T S D E +S Y + + D + + + + + D NDNPP F + +KEN +V A D+D N + + + N +F I + I +S + D E RY + + ARD G + V I I+D+ND+SP F + + S T+ G+ + T A D D+G ++ Y + S + F I+ + GSI ++ L E + + ARD
Sbjct: 26 RKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQ-VAIVTATDRDSGTNAAITYS---------LFSGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVP----LITVDDVNDNAPFFALSVY----KTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSY-FTVDS----------QGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT-QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGI-ISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPES--TVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARD 557 HSP 7 Score: 144.05 bits (362), Expect = 1.190e-34 Identity = 135/483 (27.95%), Postives = 220/483 (45.55%), Query Frame = 3
Query: 429 QLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDI 1868
+L ++V DVNDN P F+ ++ + ENS V A D D G N + Y+I +F + + +S + D E ++ L + A D T+ + I + ++ND P F Q +Y + E+ ++ +V A+D+D ++ + S DKFS+ G+IST L S Y I + D+GNP L+ + V + + D NDN P + +S + + EN +S+ K+ +D D G N ++ L N F + + V DRE K + L I D G P ++ I V V D ND+ P+ S+ EN P T V R+ A D D G+NA++ + +LS E F +D +G I+T+V DRE Q+ Y ++ D ++S + + ++DE+DN P+F T ++ I E+L V+ +DI
Sbjct: 1397 ELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKI--------NSTSGVIMTTTPLDFEEKSQYGLEVTATD---SKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDS---DKFSIDQRSGIISTADVLDRELVSL-YAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSS----SILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSG---------VITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDI 1851 HSP 8 Score: 112.849 bits (281), Expect = 4.762e-25 Identity = 115/395 (29.11%), Postives = 190/395 (48.10%), Query Frame = 3
Query: 396 LELSGSGPKFYQ---LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKD 1562
LE++ + K+ + I V ++ND P+F + + + ENSP V A D R + GS+ Y+I S+KF + S + DRE+ + + + D GNPPL++ + I I D ND++P+F+ SSY + E+ ++ ATD D ++R+T +S + D F + A GVI+ L + S Y + I A D G P ++ T+ V V DIND+RP+I +S R + EN +++ ++ SD D G N ++ L +N ++ ++ N K+ DRE + + L I +D G PSL++ + + V DE+DN P F +V+I E+LP G + ++ A D D
Sbjct: 1485 LEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASD--RDSFGSLSYSIVGGKDSDKFSI--------DQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRN------DAFMIGASSGVITLAQPLDRENKST-YDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSL----RGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKV------PLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852 HSP 9 Score: 92.0485 bits (227), Expect = 1.150e-18 Identity = 79/271 (29.15%), Postives = 132/271 (48.71%), Query Frame = 3
Query: 1617 FNIDPFSGMITTRV-SFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-LRTFSFHIKENLEGV-LGRVEAVDKDIGQNAQMDYFLFNPSPLFEI-SRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNR---PLTSSTTVEIIIDDINDNSPTFIEP--KPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS-QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
F ID +G ITT FDRE +S Y++ A D + + + DENDN P+F L ++ F+I+EN + V A D+D G NA + Y LF+ F + S+ G+I LD E D Y++ I A D + PL I +DD+NDN+P F K G + ++++ G+ + A+D D G NA++ Y++ S T ++ S G I + E ++ + A+D G ++ +++ + + ++P
Sbjct: 12 FTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTP--LDHETKDSYTMRISAFDGKHTTFVPL-------ITVDDVNDNAPFFALSVYKTGVYEDVAV----GSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRP 269 HSP 10 Score: 50.447 bits (119), Expect = 5.166e-6 Identity = 37/121 (30.58%), Postives = 54/121 (44.63%), Query Frame = 3
Query: 1902 NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI-QSQTIFYINTSDGSI 2261
N +F I + + R DRE RY + + A+D NR T V I + D NDN+P F P N+ E ++ A D D+G NA I Y++ + F +N+ G I
Sbjct: 7 NDQGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEF--PLNSYVFNIR-ENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEI 124
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 236.113 bits (601), Expect = 3.518e-63 Identity = 220/690 (31.88%), Postives = 327/690 (47.39%), Query Frame = 3
Query: 324 LITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLT-FNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQS---FDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNP-TLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLD--NNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML-----SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLEGVLGRVE--AVDKDIGQNAQMDYFLFNP-SPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTA----KAIDNDTGENAKIVYTIQSQTIFYINTSDGS------IYLNKSLQDEHILPDKII 2312
+ T D K YN + I+E S + PK Y + + V D+NDN PSF R T + EN + +L +A D D G+N + Y I V N F LIS G D L + S DRE + + L + A D GNP L + I + D ND+ P+F+ SY PE+I G +I QV A+DKDI + I S S F + GVI V L Y + Y I + A D G+ L++++ V + V D+NDN P+I + S +TEN + +A+V+VSD D G NG+V L+ + Y + N E+ + A S DRE DH L +C D G P TT + + V D ND P F R + EN + T V + A+D+D G N+++ Y + S L F IDP SGMITT DRE + + +D ++ + ++ V + D NDN P F + +++ + EN V+ A D DIG+N+ + Y + P +P F R G V+ R LD E Y+ ++ A D G R + + TV + + D+NDN P F +P + S+E + T+I + KAID D+ + A + I+ + + DGS L++ QD ++L K +
Sbjct: 14 ITTKTVLDREKVSAYN-----LTIVEFS-TPPKSYTVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQ-KL-IAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDG-DLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVRLDY-EAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHV-SYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDES------IIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKG--LVTNSRTLDHEVQSSYTFQVAATDGGGR--SCNATVHVSLTDLNDNQPVF-DPS-----SYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAV 676 HSP 2 Score: 196.052 bits (497), Expect = 1.434e-50 Identity = 201/672 (29.91%), Postives = 312/672 (46.43%), Query Frame = 3
Query: 405 SGSGPK--FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISS--RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL-DNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGV-PSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSS---ITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRY-LDRERVDRYSIEIGARDHG---NRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIE----TIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI--FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTT 2351
GS P+ L + V DVND P F ++ + E +P + + +A D D G NG + YA ++KF L N G K+ I DRE EE+ L +IA D G P +SS +K+ + DVND+ P F Q+SY F E+ +G V A+D D S VT + I+DK + G I+T L + + Y I+A D G+ + V V V D+ND P S N+ + V + +S + + D G N + + F+L + V S DREV H L+++ SD G SL T I + V D NDN P+F + ++ E LPIG+ V + A+D D G N +++Y +++ F I+ +G+I+T + D EV + Y ++ +A D + +S +TI+V D NDN P F + I EN + + ++A D D G N+++ Y + + SP N + + Q + +DRE + YS+++ A D L ++ T++III D+NDN+P F+ ++L +E Q T I A+D DTG+ + Y I S F ++ G + L SL E + + ISA D G P T+
Sbjct: 887 GGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGL----RNGG-----KIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQT----GKITTSQVLDREAKA-SYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKF---SKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTG---------VLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVE--DANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVS----RNLTYVMEDEPFNFQVTSI---TALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTS 1523 HSP 3 Score: 181.03 bits (458), Expect = 5.493e-46 Identity = 183/628 (29.14%), Postives = 302/628 (48.09%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLK---LKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMS-PSASSQIMDKFSV-AFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRP--IIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKEN--LEGVLGRVEAVDKDIGQ--NAQMDYFL---FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSI 2261
L I++ D+NDN P F + + E+ P + +V A DPD G G+V Y I +SP T + LK LK++ S D E ++ L + A DLG+PPLTS + + DVND+ P+F + + E+ G ++ +V A D+D S + S PS MDKFS+ G+I T +++ Y + + A P ++++V ++V D NDN P I + + L + EN + I +TV D D+GNN +V + + +I R +L T T+ DRE K +QL++ D+ P T IT+ ++D+NDNPP+F + S +I E P GT + L A DKD G N I Y LS + ++ID +G++ + F+ ++ EY A D + + + + I D+N++ P+F +T + HI N ++ V A D D + N ++ Y L N + LF + N + + + + R+++ I A DHG+ PL V+I+I +I D+ P F+ P + +++ + G+ I T +A +A++ Y+I S FY++ G I
Sbjct: 1424 LKIIIQDLNDNAPKFVSRNLTY-VMEDEPFNFQVTSITALDPDTGQGGNVEYRI-----------VSPDTGK-FSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVE--MDKFSIDKHSGLIVTN-SILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVT------LKVPENSPAR-LIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTI----GRSTGELST--TTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQ-GRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPAR-VSIPENSKVGSYITTVRA---RASSDAQVTYSIISGNKGRAFYVDPFTGVI 2017 HSP 4 Score: 172.94 bits (437), Expect = 1.768e-43 Identity = 201/788 (25.51%), Postives = 340/788 (43.15%), Query Frame = 3
Query: 138 INILWYSNGECVVEENSPIFVRICNVKKTFPDIE-----NPTIDNFQNFFR-----LNDNNV-EMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQ--LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFV---LISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKD------------HGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGR----VEAVDKDIGQNAQMDY-FLFNPSPLFEISRNGDIFVSQKRYLDRERVDR-YSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETI-QGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTS------DGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSS 2360
I++ + G V EN+ I ++ V + D N T++ +F LND ++ + QSLDRE ++ + CI G P+ + I V DVND P FDR T+ ++ EN+ + V + A D D G+N +VY I + S ++ I PS+ + DRE + L ++ D G+PPL+ + ++ +++TD ND+ P FNQSSY + E+ G + Q+ A D DI I+ S I+ + F + + LV S + D Y + A D G + A TV V +TD+NDN+P+ + +S + + EN + I ++ D+D GN +V +D + L L + DRE +D++ L + D G + + V D ND PPIF + + +I E+ + + + AI +D G NA++ Y +S +N + +G + + D E + A D + + + ++D NDN P+F + S ++ + +G V D D G ++ + L NP LF + N +S + +D R Y++ + A+D G+ P +S+ +E+ + D+ND SP F H+ +ET + I A D D+GEN +I Y S+ ++TS G I++ L E I + + A D G P+ ++S+
Sbjct: 279 IHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRET-----------HDHFFLKAVCID----KGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGM-------ITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYS------ILTPNTPFF---LDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNA--TVHVSLTDLNDNQPVFDPSSYS----VEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEV-FSVDGSGLITLAKL------------------LDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQF-NSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGA-LSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHV---LETTPPDSNIIEVVATDVDSGENGRISYAFDSK----VDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHG-TPRRSSSA 1000 HSP 5 Score: 159.073 bits (401), Expect = 4.087e-39 Identity = 177/653 (27.11%), Postives = 284/653 (43.49%), Query Frame = 3
Query: 432 LPILVADVNDNVPSFDRLTFNFKIAENSPAHNE--VELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSAS------------------SQIMDKFSV-----------AFDGVISTKVAL-VYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNN-GQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYML-SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTF--SFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPS--PLFEISRNGDIFVSQKRY-LDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKI--FTAK--AIDNDTGENAKIVYTIQSQTIFYINTSDG 2255
L I V D NDN P+F ++AE++ A V A D D G NG V Y+I + F + S + G ++ KL DRE F L++ D G PP +++ +K+ +TD+ND+ P F+ S N E G + V ATD D SR+T + +++ +QI F + A GVIS + + V + SF +IP+ A+D G P A LV+V I P E+ S + EN + + V V+D G G++ ++N+ F + R V P D E K L + D PS P+ + V D ND P+F + E +P+GT V + A DKD G N ++ + + S + +F ID +G+I T+ + D E + V A D M++ +++ + +LD NDNPP F + EN L L + A D+D G NA++ + + + LF I + + + + V +YS+ I A D GN PL+S+ T+ + + D ++ P+F ++ + KI F + A D D+G+ ++ + +FY TS+
Sbjct: 2053 LDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTT---GEITTAKL-----LDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLS-EVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSF-IQIPVQAMDQGVPPQRA----LVYVRIIITREPKFELPSYFGK----VPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIG------QRSGVISVNKP---LDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSF------NRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFF------VFYNPTSNA 2666 HSP 6 Score: 155.221 bits (391), Expect = 5.674e-38 Identity = 198/781 (25.35%), Postives = 342/781 (43.79%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKF--YQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPD-RGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDL-GNPPLTSSLTIKIDITDVNDHAPQF-NQSSYRFNTPESIVQGQAIGQVFATDKDISS----RVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTL-TATSTVLVHVTDINDNRPIIEIASSNQNNRLV--LTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKL-----VTAPTSSFDREVKDHHQLNIICSDMGVPS---LTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPL----FEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSI-ETIQGTKIFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLN-FIRSGKSKPPPMNKKI 2420
V+EN P+ + V + D + N +R + + + + T+Q D + +Y ++ GS P+ Q+ ++V DVND P F + ++ + E+ P + + +A D D +G N + Y I + P + + L ++ DRE+ L ++A D GN L + I+I++ DVND+ P F N+++++ PE + G + V A D D R I+ + + +++ + GVIST AL + ++ Y + + A D G T+ V ++V D NDNRP + N ++ + EN N+ + + D D G N ++ +D+ R H+K+ + T DRE + L + +D L T + ++++D NDN P F ++ + ++E+ P +VT + A+D D G ++Y + F++D +G++ S D E +Y + +A D + S +V ++D NDNPP+F R F + EN + +V A D+D G NA++ Y + PS + F I ++ + V+ LDRE+ D Y + + A SST+V I + D NDN P FI P + L + E I+T D D G N K++Y+I S F I S G + L E ++ + A+D I P T+ ++ FI PP + +
Sbjct: 1025 VKENEPVATYLGAVSASDSDEGS----NGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASY----VFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMI----------VAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFK-TVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETT----GVISTLRALDFEVTN-RYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFD------KNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQ-----------SPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTY-VMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSI--PSGVEMDKFSIDKHSGLIVTNS-ILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPV----VTLKVPENSPARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKD--ITPPYYTAFANITIFIEDQNDNPPVFQQSL 1754 HSP 7 Score: 148.288 bits (373), Expect = 6.530e-36 Identity = 146/503 (29.03%), Postives = 234/503 (46.52%), Query Frame = 3
Query: 978 GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQ-----VECKLDNNYLFNLESIQNFENRRHYKLVTAPTS-SFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLS----PECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDH-LILRMNSSITIHVTILDENDNPPKFLRTF----SFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEIS---RNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHL--NLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT-------IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
GVI+TK L S Y + I+ T + TVLV+V D+NDN P +S +LV+ EN + + K+ D D G+N V + N +F L S ++ + + LV +S DRE D + LNI SD G P+ +++ V+D NDN P F S +I EN+ +GT + ++ A DKDIG NA+I+Y + P+ + F I P +G+I V D E + Y + A D +++SS + + +LD NDN P ++ S+ + EN + + RV D D G+N +++ L F + N + ++ + LDRE D + ++ D G+ P T+ + I + D+ND +P F + N ++ T+ + A+D D G N+++VYTI + T F I+ S G I L E I + + D G P + S+ +N S + P
Sbjct: 12 GVITTKTVLDREKVSA-YNLTIVEFS----TPPKSYTVLVYVQDLNDNSPSFVRGTSA---KLVVFENDKD--FRQKLIAVDSDFGSNSTQSYTIVSGNVGN--VFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAI--FGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTL----VAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDP 496 HSP 8 Score: 145.206 bits (365), Expect = 7.051e-35 Identity = 180/716 (25.14%), Postives = 287/716 (40.08%), Query Frame = 3
Query: 423 FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRF----NTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQN-NRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHY------KLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTK--VTRLKAIDKDIGVNAQIKY-MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKE------------------------NLEG------VLGRVEAVDKDIGQNAQMDY-FLFNPSPLFEISRNGDI-FVSQKRYLD-RERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPK---PGQHLNLSIETIQGTKIFTAKAIDNDTG-ENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
F + I + D NDN P F + ++ I+E +P + A D D G+NG++VY + ++ + + S + G S F+ I +E+ IAKD G P + + ++I I D N+HAPQF ++ Y NT S + TDK + +VT + S +S + V+ + V S+ F + + IIA D G+P L V + + +I D+ P NQ R+ + EN + SYI V + D +++ I + R Y + A + D E + +L+++ + G SL + + V D NDN P F+ + + E+ V ++ A D D G N ++ Y + + F ID +G ITT DRE + + + D I +++ + V + D NDNPP F +I+E NL+ + RV A D+D G NAQ+ Y F S + + D +S +R +D R R I + A D G P + V III EPK P + + GT + T + DN G +I Y I++ F I G I +NK L E +++SA D K +++N KP
Sbjct: 1733 FANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLS----NDTYGVYSIDSRTGIVYSAA-----RFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSL--------FVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFL----NQTPARVSIPENSKVGSYITTV-----------RARASSDAQVTYSI--ISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITR---------EPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKP 2405 HSP 9 Score: 140.969 bits (354), Expect = 1.266e-33 Identity = 161/645 (24.96%), Postives = 265/645 (41.09%), Query Frame = 3
Query: 468 PSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQS-FDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD-GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDI--GVNAQIKYML--SPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT--FSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTK---IFTAKAIDNDTGENAKIVYTIQS---QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTT 2351
P F R F ++EN P V A D D G+N + Y+I +KF + D L + S DRE + + L + A + P SS +++I++ D ND+ P+F PE+ + I + D D + ++ S S F++ G +ST L + + Y++ + A D P TA + + + + D NDN P+ + + + ++E + I +T SDKD G+NG + L N+ + + SI + + + F+ +K + I D G P+ + ++D+N++ P F + V I N VT + A D D N ++ Y L S F ++ +G + T F Q + + A DH + + + I + D+PP+FL I EN + V + V +AQ+ Y + N F + G I V+ LD E + + + A G L ++I + D NDNSP F P L E K + A D D+G N K+ Y+I + +F I+++ G I K L E ++I DSGI PK+T
Sbjct: 1539 PEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSI---------DKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPEN-SPARLIYTLTVQDLDYGNNTKVLYS-IMSGNTDGAFTIGRSTGELSTTTKLDRETKA-SYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSS----TISELTPPGTSILNLTASDKDSGSNGNIVYTLSND-TYGVYSIDSRTG------IVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSK-VGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAF---HPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKST 2156 HSP 10 Score: 100.138 bits (248), Expect = 4.005e-21 Identity = 87/329 (26.44%), Postives = 143/329 (43.47%), Query Frame = 3
Query: 669 LKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMI 1646
+ + + D E F L++ A D P + + I+++DVND P F QS Y E I G + V A DKD + + + + DK S A D GVI T+ AL + + + + + A D G+P + +V + V D+NDN P+ + N L EN NS + ++ +D+D G N ++ + L I F L T T ++ + L I +D G P L++ I V V DE++ P F R + N IG V ++ A D+D G ++ ++ ++ +G+I
Sbjct: 2359 ISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGD---DKGSFAIDRKTGVIRTQRALDHETIK-THHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVL---ENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGW----LTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKMNATTGII 2676 HSP 11 Score: 90.5077 bits (223), Expect = 3.316e-18 Identity = 80/263 (30.42%), Postives = 126/263 (47.91%), Query Frame = 3
Query: 1635 SGMITTRVSFDREVQSEYKVKATAYDHLILRMNS---SITIHVTILDENDNPPKFLRTFS--FHIKENLEGVLGRVEAVDKDIGQNAQMDYFLF--NPSPLFEI----SRNGDIFV-----SQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQS----QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSL 2363
+G+ITT+ DRE K +AY+ I+ ++ S T+ V + D NDN P F+R S + EN + ++ AVD D G N+ Y + N +F++ +GD++ + +DRER+D Y + I A D GN + I ++D NDN P F + +I+ GT I A D D G NA+I Y+I++ Q IF I+ + G I N L E I++ A D G + ++S++
Sbjct: 11 AGVITTKTVLDRE-------KVSAYNLTIVEFSTPPKSYTVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQKLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDV--GTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAI 264
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO33359 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF2]) HSP 1 Score: 210.69 bits (535), Expect = 1.576e-56 Identity = 204/771 (26.46%), Postives = 347/771 (45.01%), Query Frame = 3
Query: 165 ECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGP------KFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTS--SLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDIS--SRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKA---IDKDIGVNAQIKYMLSPECL-ENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLE-GV-LGRVEAVDKDIGQNAQMDYFLF--NPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSS--TTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI---QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTT--SSLHLNFIRSGKSKP 2399
E V EN+P+ + VK ++ + N + + + N ++D + + T K++++ + + L + +S +G F + I+V D NDN P F + + + EN V A D D G N + Y+I + FV+I+ S + D L D+E E + L+LI D+G PPL S + + + ++ VN+HAP+F Y + PE++ G +I +V A + D+S +R ++ +ASS++ F V G I+ ++ DY + + + EN S + + + D+D G NGQV Y S++ V + T+ DRE + + ++ D G P T + + V V D NDNPP+F + ++ + E IGT++ R+ A DKD GVNA+I+Y L + + F+I+ +G IT + + D E +S Y + A D R+ S ++ +TI+D NDN P FL T + + EN+ G + +V A D D N ++ + + N F I +N + V+ + LD E V Y++ I A D G+ PL SS + + + +INDNSP F + ++ + T G I A D D+ N K++++I S F ++ + G + NKSL E + ++I A D G P ++ LH++ + + P
Sbjct: 115 ETRVSENTPLGTIVARVKA----VDKDSTSNADLIYSIQNGNNNGSFTIDN----STGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPL--------DKETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPRFLNEFYNASIPENLPLGTSIVRVRAVEDDVSVGARFIYVIKDAASSKV---FLVNQTGDIT-------LARELDYE-------------------------------------TRRRYEFEMYENVTSGTQVLTLFAHDRDEGINGQVF------YYIVTSSVKGVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGV-VTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDEN--TTVGHVILRVTASDLDSSLNGKVLFSILEGNSDGKFVVDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSP 813 HSP 2 Score: 154.066 bits (388), Expect = 2.878e-38 Identity = 170/664 (25.60%), Postives = 283/664 (42.62%), Query Frame = 3
Query: 468 PSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFD---GVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTAT--STVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSS------FDREVKDHHQLNIICSDMGVPSLTTTRP--ITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDI-FVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKA---IDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKP 2399
P F++ ++ I E+ + LARD D N V Y+I + + + +I T S + FD E + + A+D G+P ++ TI + ITD ND+ P F Y E+ G + +V A DKD +S ++ S + + S D G I T+ + + Y + I D+G P L++ + V++ V D NDN P E A + + EN + + +VT DKD G N ++ + + N ++ A + D+E +++ L +I +DMG+P L + + + V+V N++ P F + + SI ENLP+GT + R++A++ D+ V A+ Y++ + +G IT D E + Y+ M ++T +L T H D+D G N Q+ Y++ S + N VS LDRE V +Y++ + A+D G+ P T+S V++ + D NDN P F L LS T GT+I A D D G NA+I Y ++ + F IN + G I + +++ E + A D G T +SS+ + I ++P
Sbjct: 1 PIFNQTLYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVSFSTESDYFVIDNITGVVRSS-------KEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGN---NNGSFTIDNSTGEIMTRKEFDFEKTE-RYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPP--EFA--QKRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSG------------NTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPRFLNEFYNASIPENLPLGTSIVRVRAVEDDVSVGARFIYVIKDAASSKVFLVNQTGDITLARELDYETRRRYE----------FEMYENVTSGTQVL-----------TLFAH---------------DRDEGINGQVFYYIVTSSVKGVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLY--YTLQLSEATSIGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRP 599 HSP 3 Score: 113.62 bits (283), Expect = 1.568e-25 Identity = 101/326 (30.98%), Postives = 155/326 (47.55%), Query Frame = 3
Query: 1470 PIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLEN--FNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL-RTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFLFNP--SPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSS--TTVEIIIDDINDNSPTFIEPK--PGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTI---FYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPP 2405
PIF + S I E+ +G + + A D+D +NA++ Y + E+ F ID +G++ + FD E Q Y A D ++ TIHV I D NDN P F + + EN L ++ RV+AVDKD NA + Y + N + F I + +++K + D E+ +RY++ I D G L+S V II+ D NDN P F + + + N ++ GT + A D D+G NA + Y+I S F I G I L+K L E I +++ D GI P + + +N I SG ++ P
Sbjct: 1 PIFNQTLYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVSFSTESDYFVIDNITGVVRSSKEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNSTGEIMTRKEF-DFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTV----GTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAP 321
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 292.738 bits (748), Expect = 2.475e-82 Identity = 237/795 (29.81%), Postives = 371/795 (46.67%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEML---QSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK-----FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI-------------------------KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSN----QNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYF-LFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VR+ NV + T+++ FF++++ E+ + +DRE L Q+C Q ++ +++C + E+S GP ++ +++ D+NDN PSF + EN P LP A D D G NG Y + + ++ S+ F L T G +L I + DRE + ++L L +D G+PP +S +++ ITDVND+ P+F +S Y + PE+ G I Q+ A D D+ + QI F A + V + + V D R ++A D G P +TV++++ D NDN P IEI ++ + E+ ++ IA V VSD+D G NG V C + + F L+ E N++ Y L T+ + D E + + I+ D G PSLT+ + V V D NDNPPIF + VS EN G +VT + A D D G NA+I Y L F+ID SG I + DRE + Y+ K A D I + S T+ V + D+NDN PKF++ F+F++KENL+ +G V +D D GQNA+M F + G IF + DRE+ Y+ + A D G+ P +++ TV + + D NDN+PT P + L + T + T A D DTG NA + Y+I +F I+ + G I L L+ +H ++++ D+G ++TT+ +H+
Sbjct: 34 LAEEGPADVRVGNVAADLGMVAGSREVTFTLESGSEFFKIDNITGELTTNEKRIDREKL---QQC----QMIFD-ENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQP-QLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVG----------VNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTS--APLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLS--FDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHV 805 HSP 2 Score: 62.3882 bits (150), Expect = 3.224e-9 Identity = 62/236 (26.27%), Postives = 98/236 (41.53%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFN---QSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIE 1136
+LV D NDN P F + F F + EN ++ V + D D+G N + F+ + + + SFDRE + + A D G+PP +++ T+ + + D ND+AP SSY P S V+ + V ATD D + S + GVIS L +R+ + D+G P+ + T+ V V+V + N I+E
Sbjct: 595 VLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEM----------GLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVR-TVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGL-HRLVVQVTDNGQPSQSTTTLVHVYVNETLSNSTIVE 818
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 292.738 bits (748), Expect = 4.929e-82 Identity = 237/795 (29.81%), Postives = 371/795 (46.67%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEML---QSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK-----FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI-------------------------KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSN----QNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYF-LFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VR+ NV + T+++ FF++++ E+ + +DRE L Q+C Q ++ +++C + E+S GP ++ +++ D+NDN PSF + EN P LP A D D G NG Y + + ++ S+ F L T G +L I + DRE + ++L L +D G+PP +S +++ ITDVND+ P+F +S Y + PE+ G I Q+ A D D+ + QI F A + V + + V D R ++A D G P +TV++++ D NDN P IEI ++ + E+ ++ IA V VSD+D G NG V C + + F L+ E N++ Y L T+ + D E + + I+ D G PSLT+ + V V D NDNPPIF + VS EN G +VT + A D D G NA+I Y L F+ID SG I + DRE + Y+ K A D I + S T+ V + D+NDN PKF++ F+F++KENL+ +G V +D D GQNA+M F + G IF + DRE+ Y+ + A D G+ P +++ TV + + D NDN+PT P + L + T + T A D DTG NA + Y+I +F I+ + G I L L+ +H ++++ D+G ++TT+ +H+
Sbjct: 34 LAEEGPADVRVGNVAADLGMVAGSREVTFTLESGSEFFKIDNITGELTTNEKRIDREKL---QQC----QMIFD-ENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQP-QLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVG----------VNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTS--APLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLS--FDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHV 805 HSP 2 Score: 62.003 bits (149), Expect = 3.711e-9 Identity = 62/236 (26.27%), Postives = 98/236 (41.53%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFN---QSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIE 1136
+LV D NDN P F + F F + EN ++ V + D D+G N + F+ + + + SFDRE + + A D G+PP +++ T+ + + D ND+AP SSY P S V+ + V ATD D + S + GVIS L +R+ + D+G P+ + T+ V V+V + N I+E
Sbjct: 595 VLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEM----------GLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVR-TVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGL-HRLVVQVTDNGQPSQSTTTLVHVYVNETLSNSTIVE 818
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 292.738 bits (748), Expect = 9.617e-82 Identity = 237/795 (29.81%), Postives = 372/795 (46.79%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEML---QSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK-----FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI-------------------------KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSN----QNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYF-LFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VR+ NV + T+++ FF++++ E+ + +DRE L Q+C Q ++ +++C + E+S GP ++ +++ D+NDN PSF + EN P LP A D D G NG Y + + ++ S+ F L T G + +L I + DRE + ++L L +D G+PP +S +++ ITDVND+ P+F +S Y + PE+ G I Q+ A D D+ + QI F A + V + + V D R ++A D G P +TV++++ D NDN P IEI ++ + E+ ++ IA V VSD+D G NG V C + + F L+ E N++ Y L T+ + D E + + I+ D G PSLT+ + V V D NDNPPIF + VS EN G +VT + A D D G NA+I Y L F+ID SG I + DRE + Y+ K A D I + S T+ V + D+NDN PKF++ F+F++KENL+ +G V +D D GQNA+M F + G IF + DRE+ Y+ + A D G+ P +++ TV + + D NDN+PT P + L + T + T A D DTG NA + Y+I +F I+ + G I L L+ +H ++++ D+G ++TT+ +H+
Sbjct: 38 LAEEGPADVRVGNVAADLGMVAGSREVTFTLESGSEFFKIDNITGELTTNEKRIDREKL---QQC----QMIFD-ENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDG-EKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVG----------VNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTS--APLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLS--FDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHV 809 HSP 2 Score: 62.003 bits (149), Expect = 4.065e-9 Identity = 62/236 (26.27%), Postives = 98/236 (41.53%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFN---QSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIE 1136
+LV D NDN P F + F F + EN ++ V + D D+G N + F+ + + + SFDRE + + A D G+PP +++ T+ + + D ND+AP SSY P S V+ + V ATD D + S + GVIS L +R+ + D+G P+ + T+ V V+V + N I+E
Sbjct: 599 VLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEM----------GLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVR-TVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGL-HRLVVQVTDNGQPSQSTTTLVHVYVNETLSNSTIVE 822
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 292.352 bits (747), Expect = 1.085e-81 Identity = 237/795 (29.81%), Postives = 372/795 (46.79%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENP-----TIDNFQNFFRLNDNNVEML---QSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK-----FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAI-------------------------KPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGV-----ISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSN----QNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFE---NRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYF-LFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQT---IFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ E P VR+ NV + T+++ FF++++ E+ + +DRE L Q+C Q ++ +++C + E+S GP ++ +++ D+NDN PSF + EN P LP A D D G NG Y + + ++ S+ F L T G + +L I + DRE + ++L L +D G+PP +S +++ ITDVND+ P+F +S Y + PE+ G I Q+ A D D+ + QI F A + V + + V D R ++A D G P +TV++++ D NDN P IEI ++ + E+ ++ IA V VSD+D G NG V C + + F L+ E N++ Y L T ++ D E + + I+ D G PSLT+ + V V D NDNPPIF + VS EN G +VT + A D D G NA+I Y L F+ID SG I + DRE + Y+ K A D I + S T+ V + D+NDN PKF++ F+F++KENL+ +G V +D D GQNA+M F + G IF + DRE+ Y+ + A D G+ P +++ TV + + D NDN+PT P + L + T + T A D DTG NA + Y+I +F I+ + G I L L+ +H ++++ D+G ++TT+ +H+
Sbjct: 34 LAEEGPADVRVGNVAADLGMVAGSREVTFTLESGSEFFKIDNITGELTTNEKRIDREKL---QQC----QMIFD-ENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDG-EKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVG----------VNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHT--SAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLS--FDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHV 805 HSP 2 Score: 62.003 bits (149), Expect = 4.202e-9 Identity = 62/236 (26.27%), Postives = 98/236 (41.53%), Query Frame = 3
Query: 438 ILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFN---QSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIE 1136
+LV D NDN P F + F F + EN ++ V + D D+G N + F+ + + + SFDRE + + A D G+PP +++ T+ + + D ND+AP SSY P S V+ + V ATD D + S + GVIS L +R+ + D+G P+ + T+ V V+V + N I+E
Sbjct: 595 VLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEM----------GLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVR-TVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGL-HRLVVQVTDNGQPSQSTTTLVHVYVNETLSNSTIVE 818
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh11 (protocadherin-11 X-linked [Source:NCBI gene;Acc:101161492]) HSP 1 Score: 285.419 bits (729), Expect = 4.031e-80 Identity = 233/771 (30.22%), Postives = 375/771 (48.64%), Query Frame = 3
Query: 117 LVSLFIYINILWYSNG-ECVVEENSPIFVRICNVKKTFPDIENPTID-----NFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQ-YNYNRDSQCILILELSGSGPKFYQL---PILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFD------YRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS--SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLR-TFSFHIKENLE--GVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNL-SIETIQGTKIFTAKAIDNDTGENAKIVYTIQS----------QTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG 2333
LV L + IL + + +V+E P VRI N+ K +P+I F+ ++ D + +++ E TN + D K + +C +E++ + ++L L+ DVNDN P F N I EN+ + +P A DPD G NG Y + S +F L T +G D +L + Q+ DRE + F + + +D GNPP +S+ +++ I+DVND+ P F S + PE+ G ++ Q+ ATD D S I + S+QI F I++ L+ V D +++ ++A D G + + +TV+V+VTD+NDN P I+ + N ++L+EN N+ IA +TV+DKD G+V C D++ F L+ + N + L TA + D E + + I+ SD G P L T+ + + +KDENDN PIF + +SI EN T++ ++ A D D G NA+I Y L P+ + F+ID SG+++ DRE Q + A D+ + S++T+ + + D NDN P F ++F++ ENL G +G + D D G NA + + N F I + + DRE+ Y+ + A D G P +S V I + D+NDN P F+ P +L T G + AIDNDTG NA++ Y+I S + +F I+ G+I L + + + ++++ RD G
Sbjct: 10 LVVLLTCVLILCKAQERDYIVKEEQPENVRIGNLLKDLDLNLDPSIRLSSPLQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQNYELVKSV--TEFGLDIIETPEG-DKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVSVPENAPTGTSVAQLHATDADWGSNAQIHFA--FSNQISSSTKRHF--AINSSTGLITVKQPLDREVTPVHKLIVLASDGG--STPSRATVIVNVTDVNDNVPAIDTRYIINLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFN----DQFLLETA--APLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLIKISATDADSGSNAEIIYTLGPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSILNGKDNFIIDPQTGV-IKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGADLGLHRLVVKVRDLG 764 HSP 2 Score: 171.014 bits (432), Expect = 8.207e-43 Identity = 204/794 (25.69%), Postives = 350/794 (44.08%), Query Frame = 3
Query: 174 VEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRE---NLITNQKCDTSKQYNYNRDSQCILI-LELSGSGPKFYQ--LPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQG---HDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNT-------PESIVQGQAIGQVFATDKD--ISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFL---RTFSFHIKENLE---GVLGRVEAVDKDIGQNAQMDYFLFN---------PSPLFEISR-NGDIFVSQKRYLDRERVDRYSIEIGARDHGN-RPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQ-SQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSG--IIP--------------KTTTSSLHLNFIRSGKSKP 2399
+ EN+ I R PD+ I N++ + + ++++++ + + LI Q D K RD+ + I +E G+ PK L + ++DVNDN P F + EN+P V A D D G+N + +A SN+ IS ST + + S+ + + Q DRE+ +LI++A D G+ P S T+ +++TDVND+ P + + Y N E+ I + TDKD + +V ++ F+ F ++ T L Y ++ +Y I I+A D G P L ++ VL+ + D NDN PI +L + EN ++ + K++ +D D G+N ++ Y ++ F R +++ DRE ++ +I D G L + + ++V+D NDN P F + + ENLP+ V + D D G NA I + +NF IDP +G+I ++FDRE QS Y A D +S + + ++D NDN P F+ +S+ + V+ RV A+D D G NA++ Y + + P LF I + +G+I + +K + R +++ RD G L + T V + ++D N+ TFI+ + L S+ET I ++ G ++ I + T+ + I++ ++ K++ + SG + P K + SL LNF+ +SKP
Sbjct: 148 IPENTAINTRYPVPSAFDPDVGINGIQNYELVKSVTEFGLDIIETPEGDKWPQLIVQQNLDREK-----RDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVSVPENAPTGTSVAQLHATDADWGSNAQIHFAF-----SNQ---ISSSTKRHFAINSSTGLITVKQPLDREVTPVHKLIVLASDGGSTP--SRATVIVNVTDVNDNVPAID-TRYIINLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQF--LLETAAPLDY-ETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIF----PQPEIQLSIPENNDPSTQLIKISATDADSGSNAEII------YTLGPDAPDGFHIDRRSGILSV-GKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSIL-NGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGADLGLHRLVVKV--RDLGQPESLQAITLVHLFVNDTVSNA-TFIQ----EQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILV------IFVTALVRCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKP 897 HSP 3 Score: 149.443 bits (376), Expect = 4.490e-36 Identity = 132/444 (29.73%), Postives = 202/444 (45.50%), Query Frame = 3
Query: 1101 VTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYL-FNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKY----MLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKF-------LRTFSFHIKEN--LEGVLGRVEAVDKDIGQNAQMDYFL-----FNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTI--QSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHL 2369
+ D+NDN P+ + N + + EN N+ + D D G NG +L + F L+ I+ E + +L+ + DRE +D + I D G P ++T + V + D NDN PIF VS+ EN P GT V +L A D D G NAQI + +S +F I+ +G+IT + DREV +K+ A D +++ ++VT D NDN P L + + EN L + + DKD ++ + F P+F N + LD E Y+I+I A D G PL +S V I I D NDN+P F P+P L++ T++ A D D+G NA+I+YT+ + F+I+ G + + K L E I+ ARD+G P + ++ L
Sbjct: 129 IEDVNDNAPLFQSTVIN----ISIPENTAINTRYPVPSAFDPDVGINGIQNYELVKSVTEFGLDIIETPEGDKWPQLIVQ--QNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVSVPENAPTGTSVAQLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPLDREVTPVHKLIVLASDGGSTPSRATVIVNVT--DVNDNVPAIDTRYIINLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVF----NDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIF--PQPEIQLSIPENNDPSTQLIKISATDADSGSNAEIIYTLGPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRL 558
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000014472.1 (SMESG000014472.1) HSP 1 Score: 2155.95 bits (5585), Expect = 0.000e+0 Identity = 1058/1062 (99.62%), Postives = 1061/1062 (99.91%), Query Frame = 3
Query: 99 MKTWMTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDXXXXXXXXXXXXXFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCHKAINIPPGSTVDRKCSLPVCLNRWDKSKEIGLEEDPLYSYREFTMKPSVVNSHTPVVYDRMMSVPRTVNPYWQYKTIADPNIGFCSNFMSEDQNLPEVVYHQGNAYLYKHSRPDLGDCNSLEVISQNIYGDLSPSTVQSSIKLSLLPQANFENERTNKIENESLKSVSVERLDESKEQFFQPNSRYAGYVVGSPCYANSFV 3284
MKTWMTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVE+LQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVAD+NDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDLVLSLGIGLVLLIFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCHKAINIPP STVDRKCSLPVCLNRWDKSKEIGLEEDPLYSYREFTMKPSVVNSHTPVVYDRMMSVPRTVNPYWQYKTIADPNIGFCSNFMSEDQNLPEVVYHQGNAYLYKHSRPDLGDCNSLEVISQNIYGDLSPSTVQSSIKLSLLPQANFENERTNK+ENESLKSVSVERLDESKEQFFQPNSRYAGYVVGSPCYANSFV
Sbjct: 1 MKTWMTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVELLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADINDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDLVLSLGIGLVLLIFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCHKAINIPPSSTVDRKCSLPVCLNRWDKSKEIGLEEDPLYSYREFTMKPSVVNSHTPVVYDRMMSVPRTVNPYWQYKTIADPNIGFCSNFMSEDQNLPEVVYHQGNAYLYKHSRPDLGDCNSLEVISQNIYGDLSPSTVQSSIKLSLLPQANFENERTNKMENESLKSVSVERLDESKEQFFQPNSRYAGYVVGSPCYANSFV 1062
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000014472.1 (SMESG000014472.1) HSP 1 Score: 2144.01 bits (5554), Expect = 0.000e+0 Identity = 1054/1058 (99.62%), Postives = 1057/1058 (99.91%), Query Frame = 3
Query: 111 MTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDXXXXXXXXXXXXXFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCHKAINIPPGSTVDRKCSLPVCLNRWDKSKEIGLEEDPLYSYREFTMKPSVVNSHTPVVYDRMMSVPRTVNPYWQYKTIADPNIGFCSNFMSEDQNLPEVVYHQGNAYLYKHSRPDLGDCNSLEVISQNIYGDLSPSTVQSSIKLSLLPQANFENERTNKIENESLKSVSVERLDESKEQFFQPNSRYAGYVVGSPCYANSFV 3284
MTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVE+LQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVAD+NDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDLVLSLGIGLVLLIFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCHKAINIPP STVDRKCSLPVCLNRWDKSKEIGLEEDPLYSYREFTMKPSVVNSHTPVVYDRMMSVPRTVNPYWQYKTIADPNIGFCSNFMSEDQNLPEVVYHQGNAYLYKHSRPDLGDCNSLEVISQNIYGDLSPSTVQSSIKLSLLPQANFENERTNK+ENESLKSVSVERLDESKEQFFQPNSRYAGYVVGSPCYANSFV
Sbjct: 1 MTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTIDNFQNFFRLNDNNVELLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPKFYQLPILVADINDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQSSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIASSNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKLDNNYLFNLESIQNFENRRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNIDPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRTFSFHIKENLEGVLGRVEAVDKDIGQNAQMDYFLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIETIQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNFIRSGKSKPPPMNKKIEPKSSLSRDLVLSLGIGLVLLIFTCLLMLVTYFCASMIVQKRRQQRRMNIKDEIGNGRRNDGWFYVYCCCEPAAAASADLTTNRQCHKAINIPPSSTVDRKCSLPVCLNRWDKSKEIGLEEDPLYSYREFTMKPSVVNSHTPVVYDRMMSVPRTVNPYWQYKTIADPNIGFCSNFMSEDQNLPEVVYHQGNAYLYKHSRPDLGDCNSLEVISQNIYGDLSPSTVQSSIKLSLLPQANFENERTNKMENESLKSVSVERLDESKEQFFQPNSRYAGYVVGSPCYANSFV 1058
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033799.1 (SMESG000033799.1) HSP 1 Score: 392.889 bits (1008), Expect = 9.108e-119 Identity = 265/758 (34.96%), Postives = 418/758 (55.15%), Query Frame = 3
Query: 168 CVVEENSPIFVRICNVKKTFPDIENPTID--NFQNFFRLN-DNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK---FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQ-SSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS-SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLES--IQNFEN-RRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNI--DPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDIGQNAQMDY----FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIET-IQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
C +E++PI +C++ F P + +++N F++N N + ++ S+DRE+L CI+ + + PK +QLPI + D+NDN P FD+L++N +I EN + + +LP+ARD D G N ++Y+I+ F L+ N+ ++KL FDRE + ++L+ IA D G P T + I I I D+NDHAP+F+ Y E ++G I + TDKD + +T++++ ++ ++ F V+ ++ L Y SS + IPIIAVD+G P LT ++T+ V+V DINDN P I I + S+ ++ L EN S++A VTV+D D NG V+C L +N F L S NF N +R+Y++VT FDRE H+++ + C D G+P L++ + IT+ ++DENDNPP F + I EN+ G+ + L A D DIG NA+I Y + PE +N +P +G++T VSFDRE+ + KA A D +NSS+ + + I DEND P FL + + F IKE G +G+VEA D D N+ + + FL N L+ + +G+IF + LDRE Y + + A+D+G +SS V+I ++DINDNSP F +P ++ ET + GT I A D+D EN K+ Y + + F I+ G +++N++L ++P +++I A+D+G TTT++L L F
Sbjct: 34 CRTKEHAPINSVVCSISNRFSTERKPNLYLISYRNLFKINPHNQIVVINSIDRESL---------------NPVDCIV----NKTKPKDFQIFQLPIDIEDINDNSPIFDKLSYNIEIDENIQSGHIQQLPVARDSDYGINSEIIYSIE-GKDKGFFKLLQMKNNKPIFKTMKL-----FDREERDRYELVFIATDKGIPKKTGEIKIYIKIRDLNDHAPEFDMPKDYVIGVKEDAIEGSKICDIKVTDKDDETLITVLINSNSDPEVKRHFQVSAISGLTLISRLDYESSMRKFTIPIIAVDNGIPNLTTSTTITVNVLDINDNFPQIVIDTLSDSSSNFKLMENKPKESFVAMVTVTDADSEMNGIVDCNLIEPNNKQNFELISRYFNNFPNSKRNYRIVTL--REFDRETISHYRVTVQCKDQGLPPLSSQQTITIWIEDENDNPPSFSKFFFQDRIKENIMPGSPIFTLIATDPDIGKNAKIIYQI-PEKYQNIISIPNPSTGIVTNLVSFDREMNTSITFKAFALDEFNPLLNSSVEVTLEIEDENDCIPMFLSSAYHFKIKEGYSGWVGKVEAYDNDSNSNSDIIFSFTGFLHN--HLWILKSDGNIFSEKGIQLDREVQSTYQLTVEAKDNGVPSRSSSVIVQIQLEDINDNSPKFSQPLDSGYMKKITETLVPGTLITKVMATDDDENENGKVTYLLANNKYFIIDEKSGEVFINRTLDRLELVPRRLLIMAKDNGTPSFTTTATLQLLF 761
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033799.1 (SMESG000033799.1) HSP 1 Score: 392.504 bits (1007), Expect = 2.198e-118 Identity = 265/758 (34.96%), Postives = 418/758 (55.15%), Query Frame = 3
Query: 168 CVVEENSPIFVRICNVKKTFPDIENPTID--NFQNFFRLN-DNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILELSGSGPK---FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQ-SSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS-SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLES--IQNFEN-RRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNI--DPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDIGQNAQMDY----FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIET-IQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
C +E++PI +C++ F P + +++N F++N N + ++ S+DRE+L CI+ + + PK +QLPI + D+NDN P FD+L++N +I EN + + +LP+ARD D G N ++Y+I+ F L+ N+ ++KL FDRE + ++L+ IA D G P T + I I I D+NDHAP+F+ Y E ++G I + TDKD + +T++++ ++ ++ F V+ ++ L Y SS + IPIIAVD+G P LT ++T+ V+V DINDN P I I + S+ ++ L EN S++A VTV+D D NG V+C L +N F L S NF N +R+Y++VT FDRE H+++ + C D G+P L++ + IT+ ++DENDNPP F + I EN+ G+ + L A D DIG NA+I Y + PE +N +P +G++T VSFDRE+ + KA A D +NSS+ + + I DEND P FL + + F IKE G +G+VEA D D N+ + + FL N L+ + +G+IF + LDRE Y + + A+D+G +SS V+I ++DINDNSP F +P ++ ET + GT I A D+D EN K+ Y + + F I+ G +++N++L ++P +++I A+D+G TTT++L L F
Sbjct: 50 CRTKEHAPINSVVCSISNRFSTERKPNLYLISYRNLFKINPHNQIVVINSIDRESL---------------NPVDCIV----NKTKPKDFQIFQLPIDIEDINDNSPIFDKLSYNIEIDENIQSGHIQQLPVARDSDYGINSEIIYSIE-GKDKGFFKLLQMKNNKPIFKTMKL-----FDREERDRYELVFIATDKGIPKKTGEIKIYIKIRDLNDHAPEFDMPKDYVIGVKEDAIEGSKICDIKVTDKDDETLITVLINSNSDPEVKRHFQVSAISGLTLISRLDYESSMRKFTIPIIAVDNGIPNLTTSTTITVNVLDINDNFPQIVIDTLSDSSSNFKLMENKPKESFVAMVTVTDADSEMNGIVDCNLIEPNNKQNFELISRYFNNFPNSKRNYRIVTL--REFDRETISHYRVTVQCKDQGLPPLSSQQTITIWIEDENDNPPSFSKFFFQDRIKENIMPGSPIFTLIATDPDIGKNAKIIYQI-PEKYQNIISIPNPSTGIVTNLVSFDREMNTSITFKAFALDEFNPLLNSSVEVTLEIEDENDCIPMFLSSAYHFKIKEGYSGWVGKVEAYDNDSNSNSDIIFSFTGFLHN--HLWILKSDGNIFSEKGIQLDREVQSTYQLTVEAKDNGVPSRSSSVIVQIQLEDINDNSPKFSQPLDSGYMKKITETLVPGTLITKVMATDDDENENGKVTYLLANNKYFIIDEKSGEVFINRTLDRLELVPRRLLIMAKDNGTPSFTTTATLQLLF 777
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033799.1 (SMESG000033799.1) HSP 1 Score: 391.734 bits (1005), Expect = 2.737e-118 Identity = 265/759 (34.91%), Postives = 419/759 (55.20%), Query Frame = 3
Query: 168 CVVEENSPIFVRICNVKKTFPDIENPTID--NFQNFFRLN-DNNVEMLQSLDRENLITNQKCDTSKQYNYNRDSQCILILEL-SGSGPK---FYQLPILVADVNDNVPSFDRLTFNFKIAENSPAHNEVELPLARDPDRGNNGSVVYAIKPSAVSNKFVLISPSTNQGHDSSLKLKILQSFDREIDEEFQLILIAKDLGNPPLTSSLTIKIDITDVNDHAPQFNQ-SSYRFNTPESIVQGQAIGQVFATDKDISSRVTIMMSPSASSQIMDKFSVAFDGVISTKVALVYVSSSFDYRIPIIAVDSGNPTLTATSTVLVHVTDINDNRPIIEIAS-SNQNNRLVLTENCQSNSYIAKVTVSDKDHGNNGQVECKL---DNNYLFNLES--IQNFEN-RRHYKLVTAPTSSFDREVKDHHQLNIICSDMGVPSLTTTRPITVVVKDENDNPPIFYRQHESVSILENLPIGTKVTRLKAIDKDIGVNAQIKYMLSPECLENFNI--DPFSGMITTRVSFDREVQSEYKVKATAYDHLILRMNSSITIHVTILDENDNPPKFLRT-FSFHIKENLEGVLGRVEAVDKDIGQNAQMDY----FLFNPSPLFEISRNGDIFVSQKRYLDRERVDRYSIEIGARDHGNRPLTSSTTVEIIIDDINDNSPTFIEPKPGQHLNLSIET-IQGTKIFTAKAIDNDTGENAKIVYTIQSQTIFYINTSDGSIYLNKSLQDEHILPDKIIISARDSGIIPKTTTSSLHLNF 2375
C +E++PI +C++ F P + +++N F++N N + ++ S+DRE+L + LE+ + + PK +QLPI + D+NDN P FD+L++N +I EN + + +LP+ARD D G N ++Y+I+ F L+ N+ ++KL FDRE + ++L+ IA D G P T + I I I D+NDHAP+F+ Y E ++G I + TDKD + +T++++ ++ ++ F V+ ++ L Y SS + IPIIAVD+G P LT ++T+ V+V DINDN P I I + S+ ++ L EN S++A VTV+D D NG V+C L +N F L S NF N +R+Y++VT FDRE H+++ + C D G+P L++ + IT+ ++DENDNPP F + I EN+ G+ + L A D DIG NA+I Y + PE +N +P +G++T VSFDRE+ + KA A D +NSS+ + + I DEND P FL + + F IKE G +G+VEA D D N+ + + FL N L+ + +G+IF + LDRE Y + + A+D+G +SS V+I ++DINDNSP F +P ++ ET + GT I A D+D EN K+ Y + + F I+ G +++N++L ++P +++I A+D+G TTT++L L F
Sbjct: 34 CRTKEHAPINSVVCSISNRFSTERKPNLYLISYRNLFKINPHNQIVVINSIDRESL------------------NPVDFLEIVNKTKPKDFQIFQLPIDIEDINDNSPIFDKLSYNIEIDENIQSGHIQQLPVARDSDYGINSEIIYSIE-GKDKGFFKLLQMKNNKPIFKTMKL-----FDREERDRYELVFIATDKGIPKKTGEIKIYIKIRDLNDHAPEFDMPKDYVIGVKEDAIEGSKICDIKVTDKDDETLITVLINSNSDPEVKRHFQVSAISGLTLISRLDYESSMRKFTIPIIAVDNGIPNLTTSTTITVNVLDINDNFPQIVIDTLSDSSSNFKLMENKPKESFVAMVTVTDADSEMNGIVDCNLIEPNNKQNFELISRYFNNFPNSKRNYRIVTL--REFDRETISHYRVTVQCKDQGLPPLSSQQTITIWIEDENDNPPSFSKFFFQDRIKENIMPGSPIFTLIATDPDIGKNAKIIYQI-PEKYQNIISIPNPSTGIVTNLVSFDREMNTSITFKAFALDEFNPLLNSSVEVTLEIEDENDCIPMFLSSAYHFKIKEGYSGWVGKVEAYDNDSNSNSDIIFSFTGFLHN--HLWILKSDGNIFSEKGIQLDREVQSTYQLTVEAKDNGVPSRSSSVIVQIQLEDINDNSPKFSQPLDSGYMKKITETLVPGTLITKVMATDDDENENGKVTYLLANNKYFIIDEKSGEVFINRTLDRLELVPRRLLIMAKDNGTPSFTTTATLQLLF 763 The following BLAST results are available for this feature:
BLAST of Protocadherin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035296 ID=SMED30035296|Name=Protocadherin|organism=Schmidtea mediterranea sexual|type=transcript|length=3415bpback to top protein sequence of SMED30035296-orf-1 >SMED30035296-orf-1 ID=SMED30035296-orf-1|Name=SMED30035296-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1063bp MKTWMTLVSLFIYINILWYSNGECVVEENSPIFVRICNVKKTFPDIENPTback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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