Zinc finger C2HC domain-containing protein 1C
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035206 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Human
Match: ZC2HC1A (zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]) HSP 1 Score: 72.0182 bits (175), Expect = 4.772e-13 Identity = 59/203 (29.06%), Postives = 90/203 (44.33%), Query Frame = 2 Query: 176 IIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQ-YQPPPPRQ----GRVSNGSQVTPTTSRRMRRVAPV 763 +++ +L C IC R+F +L+KH IC+K +KKR FDS +QR +P + W + E+ + LD ++ P S I+CP+C R F E +A+RHI FC+E +RI + + + K K RTQ Y+PP ++ G S+GS P S + V V Sbjct: 10 VVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGT---------DIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSPGTASSGSSRLPQPSGAGKTVVGV 203
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Human
Match: ZC2HC1B (zinc finger C2HC-type containing 1B [Source:HGNC Symbol;Acc:HGNC:21174]) HSP 1 Score: 59.6918 bits (143), Expect = 1.495e-9 Identity = 55/184 (29.89%), Postives = 78/184 (42.39%), Query Frame = 2 Query: 203 CDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQR--TVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFR----NHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTPTTS 736 C++C R F + LE+H IC+K+ ++KR F S KQR +P + P PP K N W + E + RS + P + I+ P+C+R F E +AERH FC++ SR FN A +KLA R QGR G + PT + Sbjct: 18 CEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTDIPTVKKTPQSKSPPVRKSN-----------WRQQHED---FINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNFCKDQSSR-RVFNPAQTA-AKLASRA--------QGRAQMGPKKEPTVT 177
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Celegans
Match: T03G11.3 (Zinc finger C2HC domain-containing protein T03G11.3 [Source:UniProtKB/Swiss-Prot;Acc:Q22122]) HSP 1 Score: 55.8398 bits (133), Expect = 3.465e-8 Identity = 48/149 (32.21%), Postives = 66/149 (44.30%), Query Frame = 2 Query: 203 CDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQR----WSKPSEKQKRIPSKTRSLDDSIFRNHAK---PRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFN 628 C IC+R F +SLEKH++ CRK+ S R FDS KQR Y K NK NG F R W + S ++ +D ++ P++ S ++C +C R F +AERHI FC E +R N Sbjct: 13 CPICDRRFIKSSLEKHESACRKLASLHRKPFDSGKQRASGSDLTYADIKKVQHEKNK------NGGVFPRPQTNWRERHGNFIDAVSSSKRVDYALKTGAPLPPPPKTAVPSD--YVQCEYCSRNFNAAAAERHIPFCREQATRKQGGN 153
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Fly
Match: CG30460 (gene:FBgn0050460 transcript:FBtr0113378) HSP 1 Score: 62.003 bits (149), Expect = 1.257e-9 Identity = 67/237 (28.27%), Postives = 96/237 (40.51%), Query Frame = 2 Query: 140 ITGLLILPFTEEIIEQ-YQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQR-------TVPLPEDY------RGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHA------------------------------------KPRSLYNSKKA--MIECPHCLRLFQEGSAERHIKFCEE--IHSRIPAFN--ENWEAKSKLAIRTQYQPP 682 +T +P E + EQ QL C C+R+F ++L KH IC K SKKR FDS +QR T LP+++ R P PP N ++N S ++K RS + R A + RSL KA CPHC R F + +RH+++C+E I + + + N E +AK +L R QY+PP Sbjct: 75 LTSGSSIPVPEYVPEQSTQLTPCPCCSRTFAVDTLRKHVVICEKA-SKKRKIFDSSRQRRDGTALSTYVLPKNFGLPNAERTAGLPSPPINSRETTSVNAAPETVNSPLPVRRKSQTEMVRSTARASLRKAASTLSSNSTPEAPAMAPAASTAPAAPAAPAAPAAPLVRERSLAKRIKAPPCDRCPHCDRTFNPKAFDRHVEWCKEKAIQATMKSTNSQETSKAKERLEARKQYRPP 310
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Fly
Match: CG30460 (gene:FBgn0050460 transcript:FBtr0273341) HSP 1 Score: 61.6178 bits (148), Expect = 1.586e-9 Identity = 67/237 (28.27%), Postives = 96/237 (40.51%), Query Frame = 2 Query: 140 ITGLLILPFTEEIIEQ-YQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQR-------TVPLPEDY------RGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHA------------------------------------KPRSLYNSKKA--MIECPHCLRLFQEGSAERHIKFCEE--IHSRIPAFN--ENWEAKSKLAIRTQYQPP 682 +T +P E + EQ QL C C+R+F ++L KH IC K SKKR FDS +QR T LP+++ R P PP N ++N S ++K RS + R A + RSL KA CPHC R F + +RH+++C+E I + + + N E +AK +L R QY+PP Sbjct: 232 LTSGSSIPVPEYVPEQSTQLTPCPCCSRTFAVDTLRKHVVICEKA-SKKRKIFDSSRQRRDGTALSTYVLPKNFGLPNAERTAGLPSPPINSRETTSVNAAPETVNSPLPVRRKSQTEMVRSTARASLRKAASTLSSNSTPEAPAMAPAASTAPAAPAAPAAPAAPLVRERSLAKRIKAPPCDRCPHCDRTFNPKAFDRHVEWCKEKAIQATMKSTNSQETSKAKERLEARKQYRPP 467
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Fly
Match: CG30460 (gene:FBgn0050460 transcript:FBtr0273340) HSP 1 Score: 61.2326 bits (147), Expect = 1.848e-9 Identity = 67/237 (28.27%), Postives = 96/237 (40.51%), Query Frame = 2 Query: 140 ITGLLILPFTEEIIEQ-YQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQR-------TVPLPEDY------RGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHA------------------------------------KPRSLYNSKKA--MIECPHCLRLFQEGSAERHIKFCEE--IHSRIPAFN--ENWEAKSKLAIRTQYQPP 682 +T +P E + EQ QL C C+R+F ++L KH IC K SKKR FDS +QR T LP+++ R P PP N ++N S ++K RS + R A + RSL KA CPHC R F + +RH+++C+E I + + + N E +AK +L R QY+PP Sbjct: 163 LTSGSSIPVPEYVPEQSTQLTPCPCCSRTFAVDTLRKHVVICEKA-SKKRKIFDSSRQRRDGTALSTYVLPKNFGLPNAERTAGLPSPPINSRETTSVNAAPETVNSPLPVRRKSQTEMVRSTARASLRKAASTLSSNSTPEAPAMAPAASTAPAAPAAPAAPAAPLVRERSLAKRIKAPPCDRCPHCDRTFNPKAFDRHVEWCKEKAIQATMKSTNSQETSKAKERLEARKQYRPP 398
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Fly
Match: CG30460 (gene:FBgn0050460 transcript:FBtr0087010) HSP 1 Score: 61.2326 bits (147), Expect = 2.007e-9 Identity = 67/237 (28.27%), Postives = 96/237 (40.51%), Query Frame = 2 Query: 140 ITGLLILPFTEEIIEQ-YQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQR-------TVPLPEDY------RGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHA------------------------------------KPRSLYNSKKA--MIECPHCLRLFQEGSAERHIKFCEE--IHSRIPAFN--ENWEAKSKLAIRTQYQPP 682 +T +P E + EQ QL C C+R+F ++L KH IC K SKKR FDS +QR T LP+++ R P PP N ++N S ++K RS + R A + RSL KA CPHC R F + +RH+++C+E I + + + N E +AK +L R QY+PP Sbjct: 232 LTSGSSIPVPEYVPEQSTQLTPCPCCSRTFAVDTLRKHVVICEKA-SKKRKIFDSSRQRRDGTALSTYVLPKNFGLPNAERTAGLPSPPINSRETTSVNAAPETVNSPLPVRRKSQTEMVRSTARASLRKAASTLSSNSTPEAPAMAPAASTAPAAPAAPAAPAAPLVRERSLAKRIKAPPCDRCPHCDRTFNPKAFDRHVEWCKEKAIQATMKSTNSQETSKAKERLEARKQYRPP 467
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Zebrafish
Match: zc2hc1a (zinc finger, C2HC-type containing 1A [Source:NCBI gene;Acc:324412]) HSP 1 Score: 81.2629 bits (199), Expect = 2.057e-16 Identity = 91/324 (28.09%), Postives = 137/324 (42.28%), Query Frame = 2 Query: 170 EEIIEQ----YQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPV--------------PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEA-KSKLAIRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVA--PVIEEGLTSNLPESFYHHRQ---HYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNNQI 1066 EEI E +L C IC RSF L+KH IC+K +K+R FDS +QR PIKP PP + N W + E+ +S++ I P S I+CP+C R F E +A+RHIKFC+E SRI ++ K+K RTQY+PP P++ +N + +SR +R A G+ S+ P S + Y+P+ N L+ P + G M+P ++S+ L P T G + ++I AD C +++ ++ N Sbjct: 2 EEIEESPPTSEELVPCKICGRSFFPKVLKKHVPICQKTAAKRRKVFDSGRQRAEGTEISTVKPIKPKLQSSSSSSKSDKPEPPKKQSN-----------WRRKHEEFIATIRAAKSINQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFGENAADRHIKFCKEQASRISNKSKLAGGDKTKPPARTQYKPPAPKK---ANSPTTSSVSSRLPQRSAYGQGAGTGIPSSKPSSTGSIKSTPTGYSPLRNNSSGLTSPPSE------------GNMKPKG--MVSQSSLRNPST-----GIGMNKKKIQNADNCISRNDMKNENDF 292
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Zebrafish
Match: zc2hc1a (zinc finger, C2HC-type containing 1A [Source:NCBI gene;Acc:324412]) HSP 1 Score: 81.6481 bits (200), Expect = 2.142e-16 Identity = 92/330 (27.88%), Postives = 135/330 (40.91%), Query Frame = 2 Query: 161 PFTEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPV--------------PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLA--------IRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVAPVIEEGLTSNLPE-------SFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNN 1060 P +EE++ C IC RSF L+KH IC+K +K+R FDS +QR PIKP PP + N W + E+ +S++ I P S I+CP+C R F E +A+RHIKFC+E SRI KSKLA RTQY+PP P++ S V +SR +R A +G + +P S Y+P+ N L+ P + G M+P ++S+ L P T G + ++I AD C +++ ++ N Sbjct: 9 PTSEELVP------CKICGRSFFPKVLKKHVPICQKTAAKRRKVFDSGRQRAEGTEISTVKPIKPKLQSSSSSSKSDKPEPPKKQSN-----------WRRKHEEFIATIRAAKSINQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFGENAADRHIKFCKEQASRI-------SNKSKLAGGDKTKPPARTQYKPPAPKKANSPTASSV---SSRLPQRSA--YGQGAGTGIPSSKPSSTGSIKSTPSGYSPLRNNSSGLTSPPSE------------GNMKPKG--MVSQSSLRNPST-----GIGINKKKIQNADNCISRNDMKNEN 290
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Zebrafish
Match: zc2hc1a (zinc finger, C2HC-type containing 1A [Source:NCBI gene;Acc:324412]) HSP 1 Score: 75.8702 bits (185), Expect = 9.092e-15 Identity = 85/314 (27.07%), Postives = 131/314 (41.72%), Query Frame = 2 Query: 161 PFTEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLA--------IRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVA--PVIEEGLTSNLPESFYHHRQ---HYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNN 1060 P +EE++ C IC RSF L+KH IC+K +K+R FDS +QR + + W + E+ +S++ I P S I+CP+C R F E +A+RHIKFC+E SRI KSKLA RTQY+PP P++ +N + +SR +R A G+ S+ P S + Y+P+ N L+ P + G M+P ++S+ L P T G + ++I AD C +++ ++ N Sbjct: 9 PTSEELVP------CKICGRSFFPKVLKKHVPICQKTAAKRRKVFDSGRQRAEGT---------EISTVKPIKPKPEPPKKQSNWRRKHEEFIATIRAAKSINQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFGENAADRHIKFCKEQASRI-------SNKSKLAGGDKTKPPARTQYKPPAPKK---ANSPTTSSVSSRLPQRSAYGQGAGTGIPSSKPSSTGSIKSTPTGYSPLRNNSSGLTSPPSE------------GNMKPKG--MVSQSSLRNPST-----GIGMNKKKIQNADNCISRNDMKNEN 278
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Xenopus
Match: zc2hc1a (zinc finger, C2HC-type containing 1A [Source:NCBI gene;Acc:100124952]) HSP 1 Score: 67.3958 bits (163), Expect = 1.488e-11 Identity = 55/174 (31.61%), Postives = 81/174 (46.55%), Query Frame = 2 Query: 170 EEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIK--PVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIP-AFNENWEAKSKLAIRTQYQP 679 EEI E+ L+ C IC R+F T++L+KH IC+K KKR AFDS +QR P+K P PP + W + E+ + + I P S ++CP+C R F + +A+RHI FC+E +R+ + K K A R Q++P Sbjct: 2 EEIEEE--LKPCKICGRTFFTSTLKKHIPICQKSAVKKRKAFDSSRQRAEGTDISTVKPVKARPEPPKKQST-----------WRRKHEEFIATIRAAKGISQIIKEGGELPPPPPPSYDPDYVQCPYCQRRFNQNAADRHINFCKEQAARMGNKMKGGPDPKGKPAPRPQHKP 162
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Xenopus
Match: ENSXETT00000006755.1 (zinc finger, C2HC-type containing 1C [Source:NCBI gene;Acc:100492184]) HSP 1 Score: 60.4622 bits (145), Expect = 3.844e-9 Identity = 43/145 (29.66%), Postives = 62/145 (42.76%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLP-EDY---RGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSR 613 +L C++C R F + LEKH +C+K+ R FDS K R E Y +G +P P + N FQ+ + + +++ +K L D + CPHC R F AERHI CE I S+ Sbjct: 329 ELLPCNLCGRQFLAHRLEKHTQVCQKMQKSNRKVFDSSKARAKGTELEQYLQTKGKTRPNVPKVQSNAWRQKHESFQQTIRHARTVQQVIAKGGKLSDLP-------PPPPEENPDYVTCPHCNRRFAPRVAERHIPKCENIKSK 466
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Mouse
Match: Zc2hc1a (zinc finger, C2HC-type containing 1A [Source:MGI Symbol;Acc:MGI:1914556]) HSP 1 Score: 72.4034 bits (176), Expect = 1.610e-13 Identity = 58/202 (28.71%), Postives = 90/202 (44.55%), Query Frame = 2 Query: 176 IIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQYQPPPPRQ----GRVSNGSQVTPTTSRRMRRVAPV 763 +++ L C IC R+F +L+KH IC+K +KKR FDS +QR +P + W + E+ + LD ++ P S I+CP+C R F E +A+RHI FC+E +RI + + ++K K A R QY+P P ++ G S+GS P S + + V Sbjct: 10 VVQVGDLLPCKICGRTFFPLALKKHGPICQKTATKKRKTFDSSRQRAEGT---------DIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDSKGKPASRPQYKPSPLKKSNPPGIPSSGSSRLPQPSTTSKTIVGV 202
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Mouse
Match: Zc2hc1a (zinc finger, C2HC-type containing 1A [Source:MGI Symbol;Acc:MGI:1914556]) HSP 1 Score: 72.4034 bits (176), Expect = 2.314e-13 Identity = 58/202 (28.71%), Postives = 90/202 (44.55%), Query Frame = 2 Query: 176 IIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQYQPPPPRQ----GRVSNGSQVTPTTSRRMRRVAPV 763 +++ L C IC R+F +L+KH IC+K +KKR FDS +QR +P + W + E+ + LD ++ P S I+CP+C R F E +A+RHI FC+E +RI + + ++K K A R QY+P P ++ G S+GS P S + + V Sbjct: 10 VVQVGDLLPCKICGRTFFPLALKKHGPICQKTATKKRKTFDSSRQRAEGT---------DIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDSKGKPASRPQYKPSPLKKSNPPGIPSSGSSRLPQPSTTSKTIVGV 202
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Mouse
Match: Zc2hc1b (zinc finger, C2HC-type containing 1B [Source:MGI Symbol;Acc:MGI:1922372]) HSP 1 Score: 66.2402 bits (160), Expect = 2.459e-12 Identity = 51/153 (33.33%), Postives = 71/153 (46.41%), Query Frame = 2 Query: 203 CDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRT--VPLPEDYRGPIKPVPPSNKGN--------IHTL-NGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFN 628 C++C R F T+ LE+H IC+KV +KKR F+S KQR +P + P V P K N I+T+ + QF K P T + D I+CP+C+R F E +A+RHI FC+ SR P F+ Sbjct: 18 CEVCGRCFATDVLERHGPICKKVFNKKRKPFNSLKQRLQGTDIPTVGKSPQPKVQPVRKSNWRQQHEDFINTIRSAKQFTLAIKEGRPLPPPPRPTSNPD-------------------YIQCPYCMRRFNETAAQRHINFCKNQTSR-PVFD 150
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Mouse
Match: Zc2hc1c (zinc finger, C2HC-type containing 1C [Source:MGI Symbol;Acc:MGI:1919600]) HSP 1 Score: 57.3806 bits (137), Expect = 3.445e-8 Identity = 47/153 (30.72%), Postives = 62/153 (40.52%), Query Frame = 2 Query: 194 LQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRT--VPLPE--DYRGPIKPV----PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRN---HAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIP 619 L KC C RSF + L++H +C K+ KR FDS + R L + ++RGP PP K W + E R R + I R P L ++CPHC R F AERHI C+ I +R P Sbjct: 379 LAKCSHCGRSFLSLRLQRHSTVCGKMQGSKRKVFDSSRARAKGTELEQYLNWRGPATAKAETPPPPRKST-----------WRQKHESFIRTLRHARQVQQVIARGGNPSDLPSILPADNPDYVQCPHCSRHFAPKVAERHIPKCKTIKNRPP 520
BLAST of Zinc finger C2HC domain-containing protein 1C vs. UniProt/SwissProt
Match: sp|Q7SXT7|ZC21A_DANRE (Zinc finger C2HC domain-containing protein 1A OS=Danio rerio OX=7955 GN=zc2hc1a PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.084e-16 Identity = 92/332 (27.71%), Postives = 135/332 (40.66%), Query Frame = 2 Query: 161 PFTEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPV--------------PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLA--------IRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVAPVIEEGLTSNLPE-------SFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNNQI 1066 P +EE++ C IC RSF L+KH IC+K +K+R FDS +QR PIKP PP + N W + E+ +S++ I P S I+CP+C R F E +A+RHIKFC+E SRI KSKLA RTQY+PP P++ S V +SR +R A +G + +P S Y+P+ N L+ P + G M+P ++S+ L P T G + ++I AD C +++ ++ N Sbjct: 9 PTSEELVP------CKICGRSFFPKVLKKHVPICQKTAAKRRKVFDSGRQRAEGTEISTVKPIKPKLQSSSSSSKSDKPEPPKKQSN-----------WRRKHEEFIATIRAAKSINQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFGENAADRHIKFCKEQASRI-------SNKSKLAGGDKTKPPARTQYKPPAPKKANSPTASSV---SSRLPQRSA--YGQGAGTGIPSSKPSSTGSIKSTPSGYSPLRNNSSSLTSPPSE------------GNMKPKG--MVSQSSLRNPST-----GIGMNKKKIQNADNCISRNDMKNENDF 292
BLAST of Zinc finger C2HC domain-containing protein 1C vs. UniProt/SwissProt
Match: sp|Q8BJH1|ZC21A_MOUSE (Zinc finger C2HC domain-containing protein 1A OS=Mus musculus OX=10090 GN=Zc2hc1a PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.619e-12 Identity = 58/202 (28.71%), Postives = 90/202 (44.55%), Query Frame = 2 Query: 176 IIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQYQPPPPRQ----GRVSNGSQVTPTTSRRMRRVAPV 763 +++ L C IC R+F +L+KH IC+K +KKR FDS +QR +P + W + E+ + LD ++ P S I+CP+C R F E +A+RHI FC+E +RI + + ++K K A R QY+P P ++ G S+GS P S + + V Sbjct: 10 VVQVGDLLPCKICGRTFFPLALKKHGPICQKTATKKRKTFDSSRQRAEGT---------DIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDSKGKPASRPQYKPSPLKKSNPPGIPSSGSSRLPQPSTTSKTIVGV 202
BLAST of Zinc finger C2HC domain-containing protein 1C vs. UniProt/SwissProt
Match: sp|Q96GY0|ZC21A_HUMAN (Zinc finger C2HC domain-containing protein 1A OS=Homo sapiens OX=9606 GN=ZC2HC1A PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.292e-12 Identity = 59/203 (29.06%), Postives = 90/203 (44.33%), Query Frame = 2 Query: 176 IIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQ-YQPPPPRQ----GRVSNGSQVTPTTSRRMRRVAPV 763 +++ +L C IC R+F +L+KH IC+K +KKR FDS +QR +P + W + E+ + LD ++ P S I+CP+C R F E +A+RHI FC+E +RI + + + K K RTQ Y+PP ++ G S+GS P S + V V Sbjct: 10 VVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGT---------DIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSPGTASSGSSRLPQPSGAGKTVVGV 203
BLAST of Zinc finger C2HC domain-containing protein 1C vs. UniProt/SwissProt
Match: sp|Q9D534|ZC21B_MOUSE (Zinc finger C2HC domain-containing protein 1B OS=Mus musculus OX=10090 GN=Zc2hc1b PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.687e-11 Identity = 51/153 (33.33%), Postives = 71/153 (46.41%), Query Frame = 2 Query: 203 CDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRT--VPLPEDYRGPIKPVPPSNKGN--------IHTL-NGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFN 628 C++C R F T+ LE+H IC+KV +KKR F+S KQR +P + P V P K N I+T+ + QF K P T + D I+CP+C+R F E +A+RHI FC+ SR P F+ Sbjct: 18 CEVCGRCFATDVLERHGPICKKVFNKKRKPFNSLKQRLQGTDIPTVGKSPQPKVQPVRKSNWRQQHEDFINTIRSAKQFTLAIKEGRPLPPPPRPTSNPD-------------------YIQCPYCMRRFNETAAQRHINFCKNQTSR-PVFD 150
BLAST of Zinc finger C2HC domain-containing protein 1C vs. UniProt/SwissProt
Match: sp|A4FUE7|ZC21A_BOVIN (Zinc finger C2HC domain-containing protein 1A OS=Bos taurus OX=9913 GN=ZC2HC1A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.747e-11 Identity = 50/170 (29.41%), Postives = 75/170 (44.12%), Query Frame = 2 Query: 179 IEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKK-AMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQYQPP 682 ++ +L C IC R+F +L+KH IC+K +KKR FDS +QR +P + W + E+ + L + P S I+CP+C R F E +A+RHI FC+E +RI + + + K K RTQY+PP Sbjct: 10 VQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGTD---------IPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLGQVLKEGGKLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDTKGKSTSRTQYKPP 170
BLAST of Zinc finger C2HC domain-containing protein 1C vs. TrEMBL
Match: A0A3B3DL99 (Zinc finger, C2HC-type containing 1A OS=Oryzias melastigma OX=30732 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.648e-16 Identity = 68/216 (31.48%), Postives = 101/216 (46.76%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTPTTSRRM-RRVAPVIEEGLTSNLPESFYHHRQHYTPI 832 +L +C+ C R F LEKH IC+K +K+R FDS +QR PIKP S+ G + W K E ++L I P S I+CP+C R F E +A+RHIKFC+E +R+P+ + + K K RTQY+PP P + +S+ + P+ S R+ +R G+ SN S + + + I Sbjct: 14 ELVQCNTCKRCFFPKVLEKHAKICQKSAAKRRKVFDSSRQRAEGTDIPVLKPIKPKSQSSAGCQKAEPPKKPSNWRKKHEDFIATIRAAKALTQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFNESAADRHIKFCQEQAARMPSKGKLGDPK-KAPTRTQYKPPGPVKKSISSPASTIPSASSRLPQRSGLGQSTGIPSNKTSSAGSVKSNVSGI 228
BLAST of Zinc finger C2HC domain-containing protein 1C vs. TrEMBL
Match: A0A2B4RVU2 (Zinc finger C2HC domain-containing protein 1A OS=Stylophora pistillata OX=50429 GN=ZC2HC1A PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.537e-15 Identity = 84/280 (30.00%), Postives = 121/280 (43.21%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAM---------------IECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKS-KLAIRTQYQPPPPRQGRVSNGSQVTPTTSR-RMRRVAPVIEEG---LTSNLPESFYHHRQHYTPIYNTKIELSQFPMQSP---RKNR---SKMVTYGAMQPFSGPVISKER 952 +L +C C R+F ++ +H +C+ KKR FDS KQR LP+D+ V K G + W R + N R + +++K ++CPHC R F E +AERH+ FC+E SR+ + + AKS LA RTQY+PP P G+ ++ TPT+S + R+VA + +S S Y RQ P+ + Q P SP RK R S+ + FSG V S ER Sbjct: 19 RLAECSSCGRTFNATAIARHAKVCQ--GQKKRKPFDSSKQRNSDLPKDF------VKKPTKSQSELTAGVKKSNW--------------REKHEEFINNLRAARGVASAQKTGGPLPPPPPPAANPDYVQCPHCSRRFNEHAAERHMPFCKEQKSRLASTS---SAKSGSLAKRTQYKPPLP--GKKTSTGSATPTSSAGKTRQVASAKTKSDLDFSSPGQSSGYGSRQ---PLASPSSRRKQVPNASPMSARKGRGSPSQQRSKQLNGTFSGRVRSSER 268
BLAST of Zinc finger C2HC domain-containing protein 1C vs. TrEMBL
Match: A0A498M1B4 (Zinc finger C2HC domain-containing 1A isoform X1 OS=Labeo rohita OX=84645 GN=ROHU_030103 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.966e-15 Identity = 89/314 (28.34%), Postives = 134/314 (42.68%), Query Frame = 2 Query: 194 LQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPV--------------PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNE-NWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVAPVIEEGLTSNLP-------ESFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNNQI 1066 L C IC RSF + L+KH IC+K +KKR FDS +QR PIKP PP + N W + E+ + L+ + P S I+CP+C R F E +A+RHIKFC+E SRI + + K+K A RTQY+PP P++ S V+ +SR +R A +G + +P S Y+P+ NT L+ P + G M+P V+S+ L P + G + +++ AD C +++ + N+I Sbjct: 14 LLPCKICGRSFFSKVLKKHTPICQKTVAKKRKVFDSSRQRAEGTDISTVKPIKPKLQSSSSSSKSDKPEPPKKQSN-----------WRRKHEEFIATIRAAKGLNQVMKDGGPLPPPPPPSYDPDYIQCPYCQRRFGENAADRHIKFCKEQASRISNKGKFSGSDKAKPAARTQYKPPAPKKTNSPAVSTVSTASSRLPQRSA--YGQGAGTGIPSSKTSSTVSVRSVSSGYSPLRNTSSGLTSPPSE------------GNMKPKG--VVSQSSLRNPPS-----GIGMNKKKVQNADNCISRNDVKTENEI 295
BLAST of Zinc finger C2HC domain-containing protein 1C vs. TrEMBL
Match: A0A3S2NXF6 (Uncharacterized protein OS=Oryzias javanicus OX=123683 GN=OJAV_G00199060 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.617e-15 Identity = 77/252 (30.56%), Postives = 114/252 (45.24%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSN-GSQVTPTTSRRMRRVAPVIEEGLTSNLPESFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAM---QPFSG 931 +L +C+ C R F LEKH IC+K +KKR FDS +QR PIKP S+ G + W K E ++L I P S I+CP+C R F E +A+RHIKFC+E +R+P+ + + K K RTQY+ P P + +S+ S + P +SR +R G+ SN S + + + I + P K+R+ YG++ QP +G Sbjct: 14 ELVQCNTCKRCFFPKVLEKHAKICQKSTTKKRKVFDSSRQRAEGTDIPVLKPIKPKSQSSAGCQKAEPPKKPSNWRKKHEDFIATIRAAKALTQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFNESAADRHIKFCQEQAARMPSKAKPGDPK-KAPARTQYKAPAPVKKSISSPASTIPPASSRLPQRSGLGQSTGVPSNKTSSAGLVKSNVSGITSP-------PSGVGNKSRAPSSGYGSVRNSQPATG 257
BLAST of Zinc finger C2HC domain-containing protein 1C vs. TrEMBL
Match: A0A3P8VGM8 (Zinc finger, C2HC-type containing 1A OS=Cynoglossus semilaevis OX=244447 PE=4 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.032e-14 Identity = 59/169 (34.91%), Postives = 78/169 (46.15%), Query Frame = 2 Query: 185 QYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPP 688 Q L +C+ C RSF L KH IC+K +KKR FDS +QR PIKP S+ + W K E + L + P + ++CPHC R F E +AERHIKFC+E H+R+P + E K K A RTQ++P P Sbjct: 12 QEPLVQCNTCKRSFFPKVLAKHTKICQKTTTKKRKVFDSSRQRAEGTDIPVLKPIKPKSQSSSATAKAEPPKKPSNWRKKHEDFIATIRAAKGLTQVMKDGGPLPPPPPPTYDPDYVQCPHCQRRFNESAAERHIKFCQEQHARMPNKGKLGETK-KPAARTQFKPTAP 179
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Cavefish
Match: zc2hc1a (zinc finger C2HC-type containing 1A [Source:NCBI gene;Acc:103039924]) HSP 1 Score: 70.4774 bits (171), Expect = 7.093e-13 Identity = 58/178 (32.58%), Postives = 79/178 (44.38%), Query Frame = 2 Query: 203 CDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPV--------------PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIP---AFNENWEAKSKLAIRTQYQPP 682 C IC RSF + L+KH IC+K +K+R FDS +QR PIKP PP + N W + E+ + L+ I P S I+CP+C R F E +A+RHIKFC+E SRI F+ N +AK +TQ++PP Sbjct: 17 CKICGRSFFSKVLKKHVPICQKSAAKRRKVFDSSRQRAEGTDISTVKPIKPKLQSSTTSSKSDKPEPPKKQSN-----------WRRKHEEFIATIRAAKGLNQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFSENAADRHIKFCKEQASRISNKGKFSGNEKAKP--PAKTQFKPP 181
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Cavefish
Match: zc2hc1a (zinc finger C2HC-type containing 1A [Source:NCBI gene;Acc:103039924]) HSP 1 Score: 70.4774 bits (171), Expect = 7.986e-13 Identity = 58/182 (31.87%), Postives = 81/182 (44.51%), Query Frame = 2 Query: 203 CDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPV--------------PPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKK-AMIECPHCLRLFQEGSAERHIKFCEEIHSRIP---AFNENWEAKSKLAIRTQYQPPPPRQ 694 C IC RSF + L+KH IC+K +K+R FDS +QR PIKP PP + N W + E+ + L+ I P S I+CP+C R F E +A+RHIKFC+E SRI F+ N +AK +TQ++PP ++ Sbjct: 17 CKICGRSFFSKVLKKHVPICQKSAAKRRKVFDSSRQRAEGTDISTVKPIKPKLQSSTTSSKSDKPEPPKKQSN-----------WRRKHEEFIATIRAAKGLNQVIKDGGPLPPPPPPSYDPDYIQCPYCQRRFSENAADRHIKFCKEQASRISNKGKFSGNEKAKP--PAKTQFKPPAVKK 185
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Cavefish
Match: ENSAMXT00000054229.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:28113548:28117691:-1 gene:ENSAMXG00000040113.1 transcript:ENSAMXT00000054229.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 59.6918 bits (143), Expect = 5.361e-9 Identity = 48/145 (33.10%), Postives = 62/145 (42.76%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRT--VPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIP 619 QL C+ICNR F LEKH IC K+ KR FDS + R L + + I+ P K N N Q + +Q R P+ P+ + + CPHC R F G AERHI C+ I S+ P Sbjct: 570 QLVPCEICNRCFAEERLEKHIRICEKLQQSKRKTFDSAQFRAKGTELEKFMKTNIQRKAPEPKKN----NWRQKHEALIHNLRQARAPAP----------GGFSPKPSLDVNPDYVSCPHCSRRFAPGPAERHIPKCQNIKSKPP 700
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Cavefish
Match: ENSAMXT00000014957.2 (pep primary_assembly:Astyanax_mexicanus-2.0:9:28110660:28118492:-1 gene:ENSAMXG00000040113.1 transcript:ENSAMXT00000014957.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.9954 bits (136), Expect = 6.035e-9 Identity = 46/155 (29.68%), Postives = 64/155 (41.29%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQ-RWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSK 652 QL C+ICNR F LEKH IC K+ KR FDS + +R + K NI + F+ W + E + R+ F P+ + + CPHC R F G AERHI C ++P E + +S+ Sbjct: 8 QLVPCEICNRCFAEERLEKHIRICEKLQQSKRKTFDSAQ---------FRAKGTELEKFMKTNIQSKPRFIFKNNWRQKHEALIHNLRQARAPAPGGF----SPKPSLDVNPDYVSCPHCSRRFAPGPAERHIPKC-----KLPCLTECFTLRSQ 144
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Sea Lamprey
Match: zc2hc1a (zinc finger, C2HC-type containing 1A [Source:NCBI gene;Acc:324412]) HSP 1 Score: 79.7221 bits (195), Expect = 9.128e-17 Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 2 Query: 149 LLILPFTEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKA-MIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVAPVIE 769 LL+ + E Y C +C R+F SL+KH N+CRK +KKR FDS++QR +KP S K + + W + E+ + + + ++ P S ++CP C R F EG+AERHI FC+E +RI + +A S+LA+R Q PPP G T + R+R +P E Sbjct: 1 LLVAEYIGPSRENYL--PCSVCGRTFAPQSLKKHINVCRKQATKKRKVFDSQRQR---FDGTEISTLKPKLASAKQSQPLPQ--KKSNWRQKHEEFVKTIRAAKGVTQALKEGGPLPPPPPPSLNPDYVQCPCCQRRFNEGAAERHITFCKEQAARIGRSGPSQQASSRLAVRIQV-PPPACAG-------ATSALASRLREASPARE 193
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009229.1 (pep scaffold:Pmarinus_7.0:GL476498:140544:146501:-1 gene:ENSPMAG00000008345.1 transcript:ENSPMAT00000009229.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.9878 bits (123), Expect = 1.540e-7 Identity = 47/148 (31.76%), Postives = 58/148 (39.19%), Query Frame = 2 Query: 182 EQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKA----MIECPHCLRLFQEGSAERHIKFCEEIHSR 613 E L KC C R+F LEKH NIC K KKR D K R +G NK T + W SE +R + R I ++ K L A + CPHC R F AERH+ C+ + SR Sbjct: 189 EILDLAKCHTCGRTFAKERLEKHANICTKTTQKKRKVIDFSKIRV-------QGTDMEKFCKNKSK--TPEQAKKPNWKAKSEALQRTLREAR-----IAQHGGKLSDLPPPAPAENPDYVSCPHCQRRFAPDVAERHVPKCQNLRSR 322
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Nematostella
Match: EDO46282 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQF9]) HSP 1 Score: 71.2478 bits (173), Expect = 8.710e-15 Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 194 LQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKK-AMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQ 670 L+ C C R+F T++L +HQ IC K+ KKR FDS K+RT + + KP NI + W + E+ R + ++ R P + ++CPHC R F E +AERHI FC+E SRI + A S++A RTQ Sbjct: 1 LEPCGNCGRTFNTDTLARHQKICTKL--KKRKQFDSSKKRTEGIVDISLLKSKP------SNIALELKPKRSNWKQKHEEFLATVRSARQVTTAVKRGEPLPPPPPPTINPDYVQCPHCSRRFNEHAAERHISFCKEQKSRIGK-SPGCTAASRMAARTQ 151
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Nematostella
Match: EDO29664 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T301]) HSP 1 Score: 65.4698 bits (158), Expect = 6.720e-13 Identity = 50/151 (33.11%), Postives = 73/151 (48.34%), Query Frame = 2 Query: 194 LQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKT---RSLDDSIFR--NHAK------PRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSR 613 L C IC R+FQT+ LEKHQ +C K +++KR AFD KQRT GT+ +++ K + K+ P K R+ +S + +AK P + N ++CPHC R F +AERHI C++I +R Sbjct: 1 LSPCSICGRNFQTDRLEKHQKVCAKNSTRKRKAFDMTKQRTA-------------------------GTEHEKYVK-AGAHKQEPEKKVDWRAQHESFIKAIRYAKGSSDEPPPVMENPH--YVQCPHCERKFNPETAERHIPRCKDIKAR 123
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Nematostella
Match: EDO38611 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCJ1]) HSP 1 Score: 51.6026 bits (122), Expect = 4.646e-8 Identity = 44/144 (30.56%), Postives = 62/144 (43.06%), Query Frame = 2 Query: 194 LQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPL-PEDYRGPI---KPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSR 613 L C C R+F + + KH+ ICRK +K+R FDS K RT Y P KP P KGN + +F R + ++K + + + D P Y+ + C +C R F AERHI C +R Sbjct: 3 LVPCPNCGRNFAMDRIAKHETICRKTGTKQRKVFDSTKARTSGTEAAGYNRPGARKKPEPAVPKGNWRAKH-QEFIRAIRDAKKVSQHIASGGKVSDL-------PPPQYSENPDYVLCRYCQRRFNPTVAERHIPKCANTTNR 138
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Medaka
Match: zc2hc1a (zinc finger C2HC-type containing 1A [Source:NCBI gene;Acc:101163365]) HSP 1 Score: 82.8037 bits (203), Expect = 5.673e-17 Identity = 67/201 (33.33%), Postives = 92/201 (45.77%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS-KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPP-RQGRVSNGSQVTPTTSRRMRRVAPVIEEGLTSN 787 +L +C+ C R F LEKH IC+K +K+R FDS +QR PIKP S+ G + W K E +SL + P S I+CP+C R F E +A+RHIKFC+E +RIP + + K K RTQY+PP ++ S S + TSR +R G+ SN Sbjct: 14 ELVQCNTCKRCFFPKVLEKHAKICQKTATKRRKVFDSSRQRAEGTDIPVLKPIKPKSQSSAGCQKAEPPKKPSNWRKKHEDFIATIRAAKSLTQVMKEGGPLPPPPPPSYDPDYIQCPYCQRRFNESAADRHIKFCQEQAARIPTKGKLGDPK-KTPGRTQYKPPASVKKTNPSPASSIPSATSRLPQRSGLGQSTGIPSN 213
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Medaka
Match: zc2hc1a (zinc finger C2HC-type containing 1A [Source:NCBI gene;Acc:101163365]) HSP 1 Score: 73.9442 bits (180), Expect = 4.133e-14 Identity = 62/201 (30.85%), Postives = 87/201 (43.28%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKK-AMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPP-RQGRVSNGSQVTPTTSRRMRRVAPVIEEGLTSN 787 +L +C+ C R F LEKH IC+K +K+R FDS +QR +P + W K E +SL + P S I+CP+C R F E +A+RHIKFC+E +RIP + + K K RTQY+PP ++ S S + TSR +R G+ SN Sbjct: 14 ELVQCNTCKRCFFPKVLEKHAKICQKTATKRRKVFDSSRQRAEGTD---------IPVLKPIKPKAEPPKKPSNWRKKHEDFIATIRAAKSLTQVMKEGGPLPPPPPPSYDPDYIQCPYCQRRFNESAADRHIKFCQEQAARIPTKGKLGDPK-KTPGRTQYKPPASVKKTNPSPASSIPSATSRLPQRSGLGQSTGIPSN 204
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Planmine SMEST
Match: SMESG000009557.1 (SMESG000009557.1) HSP 1 Score: 999.964 bits (2584), Expect = 0.000e+0 Identity = 478/481 (99.38%), Postives = 480/481 (99.79%), Query Frame = 2 Query: 167 TEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTPTTSRRMRRVAPVIEEGLTSNLPESFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNNQIIMYPDTVSAQIQTDRLDAPESPKVAVVTPSRQVQPIYINPYQRNVYSTPYWHNNWQNVNPWCNEDTYLQMAPKFAAPMLYNPQWSPYPVLPDLSPRNYVPDPQTRHPRPMDYYQNESQRYHYQPPPPDRCLLSRDDTILDDEYLAKMNSHSKHNYRYCGKCGSKFNAYGAHYCSDCGAFNK 1609 +EEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTP TSRRMRRVAPVIEEGLTSNLPESFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNNQIIMYPDTVSAQIQTDRLDAPESPKVAVVTPSRQVQPIYINPYQRNVYSTPYWHNNWQNVNPWCNEDTYLQMAPKFAAPMLYNPQWSPYPVLPDLSPRNY+PDPQTRHPRPMDYYQNESQRYHYQPPPPDRCLLSRDDTILDDEYLAKMNSHSKHNYRYCGKCGSKFNAYGAHYCSDCGAFNK Sbjct: 3 SEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIECPHCLRLFQEGSAERHIKFCEEIHSRIPAFNENWEAKSKLAIRTQYQPPPPRQGRVSNGSQVTPNTSRRMRRVAPVIEEGLTSNLPESFYHHRQHYTPIYNTKIELSQFPMQSPRKNRSKMVTYGAMQPFSGPVISKERLDKPKTRFTGKGESLWPQRIYIADQCGYQDENRDNNQIIMYPDTVSAQIQTDRLDAPESPKVAVVTPSRQVQPIYINPYQRNVYSTPYWHNNWQNVNPWCNEDTYLQMAPKFAAPMLYNPQWSPYPVLPDLSPRNYMPDPQTRHPRPMDYYQNESQRYHYQPPPPDRCLLSRDDTILDDEYLAKMNSHSKHNYRYCGKCGSKFNAYGAHYCSDCGAFNK 483
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Planmine SMEST
Match: SMESG000054669.1 (SMESG000054669.1) HSP 1 Score: 58.151 bits (139), Expect = 5.383e-9 Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 2 Query: 191 QLQKCDICNRSFQTNSLEKHQNICRKVNSKKRPAFDSKKQRT----VPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQRWSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNS--KKAMIECPHCLRLFQEGSAERHIKFCEEIHSRI 616 QLQ C C R+F+ + L KH+ IC K N K+R FDS KQR +P+ + + P P S + ++W + E R+ + R A ++++CP+C R F E + RH+ FC+E +++ Sbjct: 7 QLQPCKCCGRNFRPDVLVKHEPICIKSNRKQRKVFDSGKQRAEGSDIPINKTLKPGEIPKPDSKLAAAEA----RTKQWRQKHEMLIESFKAARNYSTAK-RTGAPLPPPPPPVIDTSLVKCPYCHRRFNEDACNRHVPFCKEQQAKL 149
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Planmine SMEST
Match: SMESG000022203.1 (SMESG000022203.1) HSP 1 Score: 53.1434 bits (126), Expect = 4.777e-7 Identity = 53/176 (30.11%), Postives = 76/176 (43.18%), Query Frame = 2 Query: 194 LQKCDICNRSFQTNSLEKHQNICRK--VNSKKRPAFDSKKQRTVPLPEDYRGPIKPVPPSNKGNIHTLNGTQFQR---WSKPSEKQKRIPSKTRSLDDSIFRNHAKPRSLYNSKKAMIE-----CPHCLRLFQEGSAERHIKFCEEIHSR----IPAFNENWEAKSKLAIRTQYQP 679 L C+ CNR+F SL KH+ C + K+R + S + Y+G KP+ I + + QR W E+ R R D++ A L ++E CPHC R F E + ERHI C+E R P++ + EAK +LA+R YQP Sbjct: 44 LTSCEFCNRTFLPGSLSKHKRGCYNSWLKLKERESKMSNNTDKGFITNGYQGD-KPILT-----IEQMLAKRRQRRLNWRLRHEEFMRAVHAARDYADAV----ASGNPLPPPPPPIVEPDLRQCPHCQRKFHEKAIERHIVRCKEQSIRNNKERPSY-QTMEAKRRLAVRLYYQP 208 The following BLAST results are available for this feature:
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of Zinc finger C2HC domain-containing protein 1C vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Zinc finger C2HC domain-containing protein 1C vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Zinc finger C2HC domain-containing protein 1C vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035206 ID=SMED30035206|Name=Zinc finger C2HC domain-containing protein 1C|organism=Schmidtea mediterranea sexual|type=transcript|length=1628bpback to top protein sequence of SMED30035206-orf-1 >SMED30035206-orf-1 ID=SMED30035206-orf-1|Name=SMED30035206-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=496bp MLLNGITGLLILPFTEEIIEQYQLQKCDICNRSFQTNSLEKHQNICRKVNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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