Ubiquitin-like domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30035037 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: RPS27A (ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]) HSP 1 Score: 86.6557 bits (213), Expect = 1.499e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: RPS27A (ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]) HSP 1 Score: 86.6557 bits (213), Expect = 1.499e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: RPS27A (ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]) HSP 1 Score: 86.6557 bits (213), Expect = 1.499e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: AL136454.1 (novel protein similar to ribosomal protein S27a RPS27A) HSP 1 Score: 81.2629 bits (199), Expect = 1.797e-19 Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFT--VELSQ-LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T VELS + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTP+K H K LA+LK Y +D++G ++ L ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLMGKTITLEVELSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPRKNKHKRKKVKLALLKYYKVDENGKISCLHRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: AL136454.1 (novel protein similar to ribosomal protein S27a RPS27A) HSP 1 Score: 81.2629 bits (199), Expect = 1.797e-19 Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFT--VELSQ-LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T VELS + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTP+K H K LA+LK Y +D++G ++ L ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLMGKTITLEVELSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPRKNKHKRKKVKLALLKYYKVDENGKISCLHRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubl-1 (Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]) HSP 1 Score: 81.6481 bits (200), Expect = 6.669e-20 Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 31 IFVKYLDKIFTVELS---QLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREEC--PECGPGIFLAEHADRRHCGKCSFTVFKD 459 +FVK L + +E++ + +I + IE+ + +EQ++ Y GR + D I +E TI V L GG KRKKK +TTPKK K LA+LK Y ID++G +T+LR+EC P CG G+F+A+HA+R +CG+C T+ D Sbjct: 2 VFVKTLHRTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDC----GIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVD 145
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubl-1 (Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]) HSP 1 Score: 81.6481 bits (200), Expect = 6.669e-20 Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 31 IFVKYLDKIFTVELS---QLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREEC--PECGPGIFLAEHADRRHCGKCSFTVFKD 459 +FVK L + +E++ + +I + IE+ + +EQ++ Y GR + D I +E TI V L GG KRKKK +TTPKK K LA+LK Y ID++G +T+LR+EC P CG G+F+A+HA+R +CG+C T+ D Sbjct: 2 VFVKTLHRTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDC----GIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVD 145
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubl-1 (Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]) HSP 1 Score: 81.6481 bits (200), Expect = 6.669e-20 Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 31 IFVKYLDKIFTVELS---QLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREEC--PECGPGIFLAEHADRRHCGKCSFTVFKD 459 +FVK L + +E++ + +I + IE+ + +EQ++ Y GR + D I +E TI V L GG KRKKK +TTPKK K LA+LK Y ID++G +T+LR+EC P CG G+F+A+HA+R +CG+C T+ D Sbjct: 2 VFVKTLHRTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDC----GIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVD 145
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Match: RpS27A (gene:FBgn0003942 transcript:FBtr0080016) HSP 1 Score: 85.5001 bits (210), Expect = 2.213e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKKN++TPKKI H K LA+LK Y +D++G + +LR ECP CG G+F+A H DR +CGKC+ T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]) HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-21 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]) HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-21 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]) HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-21 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926]) HSP 1 Score: 86.6557 bits (213), Expect = 1.358e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926]) HSP 1 Score: 80.1073 bits (196), Expect = 3.724e-19 Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 130 EQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 33 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 140
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Rps27a (ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:1925544]) HSP 1 Score: 85.5001 bits (210), Expect = 3.456e-21 Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+ H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Rps27a (ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:1925544]) HSP 1 Score: 85.5001 bits (210), Expect = 3.456e-21 Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+ H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P69061|RS27A_KLULA (Ubiquitin-40S ribosomal protein S27a OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=ubi3 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 9.135e-24 Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECPECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK +TTPKKI H HK LA+L Y +D +G + KLR+ECP CGPGIFLA H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKVYTTPKKIRHKHKKVKLAVLNYYKVDDEGKVAKLRKECPNCGPGIFLANHGDRFYCGKCHST 145
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P59271|R27AA_ARATH (Ubiquitin-40S ribosomal protein S27a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27AA PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.412e-23 Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT-VFK 456 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK +T PKKI H HK LA+L+ Y +D G + +L++ECP CGPG F+A H DR +CGKC T VFK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFK 151
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P79781|RS27A_CHICK (Ubiquitin-40S ribosomal protein S27a OS=Gallus gallus OX=9031 GN=RPS27A PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 6.821e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSEECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P62979|RS27A_HUMAN (Ubiquitin-40S ribosomal protein S27a OS=Homo sapiens OX=9606 GN=RPS27A PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.197e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P62978|RS27A_CAVPO (Ubiquitin-40S ribosomal protein S27a OS=Cavia porcellus OX=10141 GN=RPS27A PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.197e-21 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +++LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A507DVW0 (Ubiquitin-like domain-containing protein OS=Powellomyces hirtus OX=109895 GN=PhCBS80983_g04943 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.860e-23 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECPE--CGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK +TTPKKI H HK LA+LK Y +D DG +T+LR ECP CG GIF+A H DR++CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKTYTTPKKIRHKHKKVKLAVLKYYKVDDDGKITRLRRECPNETCGAGIFMAMHFDRQYCGKCGLT 147
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A507EDP5 (Ubiquitin-like domain-containing protein OS=Powellomyces hirtus OX=109895 GN=PhCBS80983_g00453 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.986e-23 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECPE--CGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK +TTPKKI H HK LA+LK Y +D DG +T+LR ECP CG GIF+A H DR++CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKTYTTPKKIRHKHKKVKLAVLKYYKVDDDGKITRLRRECPNETCGAGIFMAMHFDRQYCGKCGLT 147
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A1K0H796 (Probable ubiquitin/ribosomal protein S27a fusion protein OS=Ustilago bromivora OX=307758 GN=UBRO_06600 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.397e-23 Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREEC--PECGPGIFLAEHADRRHCGKCSFTVF 453 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TLL NI E T+ + RL GG KRKKK +TTPK+I H K ++ILK Y +D DGN+ +LR EC PECG GIF++ H +R++CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLRGGAKKRKKKVYTTPKRIPHKRKKVKMSILKYYKVDGDGNIKRLRRECPSPECGAGIFMSWHKNRQYCGKCKLTFM 149
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A0U2V515 (40S ribosomal protein S27a OS=Acartia pacifica OX=335913 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.558e-22 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKK+N+TTPKKI H H+ LA+LK Y +D +G + +LR ECP ECG G+F+A H DR+ CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKENYTTPKKIKHKHRKVKLAVLKYYKVDDNGKINRLRRECPSEECGAGVFMAAHFDRQTCGKCGLT 147
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A3G2S3X0 (40S ribosomal protein S27a OS=Malassezia restricta CBS 7877 OX=425264 GN=RPS27A PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.593e-22 Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREEC--PECGPGIFLAEHADRRHCGKCSFTVF 453 M +FVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK +TTPKKI H H+ +A LK Y I+ DG++ +LR EC PECGPGIF+A H +R++CGKC T Sbjct: 1 MQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKVYTTPKKIKHKHRKVKMATLKYYRINDDGSVKQLRRECPSPECGPGIFMAWHHNRQYCGKCHLTYL 149
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:103044043]) HSP 1 Score: 85.5001 bits (210), Expect = 2.656e-21 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007011.1 (pep scaffold:Pmarinus_7.0:GL484716:14406:16135:-1 gene:ENSPMAG00000006335.1 transcript:ENSPMAT00000007011.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.1814 bits (191), Expect = 1.446e-19 Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 130 EQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 +Q+ ++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G +T+LR ECP ECG G+F+A H +R++CGKC T Sbjct: 5 DQQRIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKITRLRRECPSEECGAGVFMANHFNRQYCGKCCLT 112
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Match: RPS31 (Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog [Source:SGD;Acc:S000004157]) HSP 1 Score: 75.0998 bits (183), Expect = 2.638e-18 Identity = 66/150 (44.00%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 25 MAIFVKYLD-KIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREEC--PECGPGIFLAEHADRRHCGKCSFTVFK 456 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK +TTPKKI H HK LA+L Y +D +G +TKLR EC P CG G+FLA H DR +CGKC +V+K Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKC-HSVYK 149
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25]) HSP 1 Score: 77.411 bits (189), Expect = 1.101e-18 Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKKN+TTPKKI H K LA+LK Y +D++G +T+LR ECP CG G+F+A H DR++CGKC T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRECPSESCGAGVFMASHFDRQYCGKCCLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670]) HSP 1 Score: 87.0409 bits (214), Expect = 4.902e-22 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC+ T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCTLT 147
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670]) HSP 1 Score: 74.3294 bits (181), Expect = 6.988e-17 Identity = 62/171 (36.26%), Postives = 90/171 (52.63%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVEL---SQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSY------------------------SIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC+ T Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVWLEPAAAEPGSVSASGLTSVVLQVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCTLT 171
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670]) HSP 1 Score: 67.781 bits (164), Expect = 3.352e-14 Identity = 51/132 (38.64%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 130 EQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSY------------------------SIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFT 447 +Q++++ G+ + D +TL NI E T+ + RL GG KRKKK++TTPKK H K LA+LK Y +D++G + +LR ECP ECG G+F+A H DR +CGKC+ T Sbjct: 55 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVWLEPAAAEPGSVSASGLTSVVLQVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCTLT 186
BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000067884.1 (SMESG000067884.1) HSP 1 Score: 271.166 bits (692), Expect = 1.183e-94 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 Query: 25 MAIFVKYLDKIFTVELSQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECPECGPGIFLAEHADRRHCGKCSFTVFKDQRNIST 477 MAIFVKYLDKIFTVELSQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGKNKRKKKNFTTPKKIAHVHKSQPLAILKSYSIDKDGNLTKLREECPECGPGIFLAEHADRRHCGKCSFTVFKDQRNIST Sbjct: 1 MAIFVKYLDKIFTVELSQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGKNKRKKKNFTTPKKIAHVHKSQPLAILKSYSIDKDGNLTKLREECPECGPGIFLAEHADRRHCGKCSFTVFKDQRNIST 151
BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000048830.1 (SMESG000048830.1) HSP 1 Score: 68.9366 bits (167), Expect = 4.098e-15 Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 25 MAIFVKYL-DKIFTVELSQ---LCNISEIIESVCNLRKQEQKIVYQGRLITDVKTLLSENICNEDTIEVFERLCGGXXXXXXXXXXXXXXIAHVHKSQPLAILKSYSIDKDGNLTKLREECP--ECGPGIFLAEHADRRHCGKCSFTVFKDQR 465 M IFVK L K T+E+ + N+ I+ + +Q++++ G+ + D +TL NI E T+ + RL GG KRKKKN+TTPKKI H K LA+LK Y +D +G + +LR+ECP CGPG+F+A H DR++CGKC T + Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNK 153 The following BLAST results are available for this feature:
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 3
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30035037 ID=SMED30035037|Name=Ubiquitin-like domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=499bpback to top protein sequence of SMED30035037-orf-1 >SMED30035037-orf-1 ID=SMED30035037-orf-1|Name=SMED30035037-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=152bp MAIFVKYLDKIFTVELSQLCNISEIIESVCNLRKQEQKIVYQGRLITDVKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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