G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30034984 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A3S4ZJY0 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS6891 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 8.017e-54 Identity = 138/371 (37.20%), Postives = 190/371 (51.21%), Query Frame = 1 Query: 40 YFFSWFLLLVNLVSLFGCCLCLGVILKYK-VFTKSTRIWFLALAASDISTILIATSDNYLALTFSN-FHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSK------------------------------XXXXXXXXXXXXCGFSVTAVSMKFDTKT-----------SECLRKEYLGNVISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQ----INRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHWYQKLCLC 1011 YF+ WF+ L N LC V+L+++ VF STR WFLAL ASD +L A +D Y +TF + +H LG + C IR IV + W+ N+LQ+G S+ER ISI+ PL++R LT ++ G ++T + ++ K+ +EC R+ N+ ITKIVY+ DLIVFR IP M+I S I+A ++ +++R + + + RR A + RES+ +LLL MN ALLTNPLFLIFEL DGE SE KL+GD C+S +LTT FN LMY NN TNWIFY+ G RF+R ++ LC C Sbjct: 21 YFYVWFMPLANHTGTICSGLCFVVLLRHRRVFASSTRAWFLALTASDFLILLFAGNDMYAEVTFPHAYHYFIGCVLGPYTCIIRLSTIVGLLWSSNLLQAGLSLERLISILAPLRSRALLTGRLARFIITGMISLALVGGIAMNMLSLQPTIFAQLANSTEEAIQVGPAGVNLTELDLEESPKSNDSGSFDYGLLAECRRR----NISHITKIVYHIDLIVFRAIPFATMLISSGILACLIRSQSRRRNELVHNLSLVQRRHRAV-------LQSRESRASLLLLAMNATALLTNPLFLIFELWDGEASEGHPAAKLTGDVCVSAMLTTFFNFLMYFNNQTNWIFYLTFGARFRRHIQDLV------LCRC 374
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A2H1CRY9 (Rhodopsin orphan GPCR OS=Fasciola hepatica OX=6192 GN=D915_001415 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 4.209e-53 Identity = 133/349 (38.11%), Postives = 195/349 (55.87%), Query Frame = 1 Query: 1 NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKY-KVFTKSTRIWFLALAASDISTILIATSDNYLALTFS-NFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKTSECLR-KEYLGNV--------------------ISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAI 978 +SS +I I YFFSW+++L NL + LC V++K+ +VF STR WF+A+ SD T+L+A +D Y + F ++H K G + C +R I+++ W+ N+LQ+G S+ER S+I PL+ R T ++ I+ + + CG ++ + +D K E +E GN + +TKIVY+ DLI+FR IP M++ S IIA ++ + +R K + N SN ESQ +LLL MN L+TNPLFLIFELIDGEGSE + GKL+G+ C++ +L +FNCL+Y NN TNWIFYI G RF+ V + Sbjct: 10 DSSRYIADGFIN-YFFSWYIVLANLTATVFSGLCFFVLIKHPRVFASSTRAWFMAITVSDFFTLLLAANDMYAEVMFPMSYHRLLFKVFGRYNCMVRLSLILSLGWSSNLLQTGLSLERLASVIAPLKTRALTTGRLTRFTILGIIIFS--CGIAIGVNILSYDPKYMESGDTQEEPGNEMLLECDRVNGSTLLGEMNVNLDLTKIVYHIDLIMFRAIPFGTMLVSSAIIASLIRCQRRRRTKLMGANSVLQQRQLYSGSN---HESQASLLLLTMNLTTLITNPLFLIFELIDGEGSEGRTSGKLTGNTCVTWVLRQIFNCLLYFNNQTNWIFYIAFGARFRHHIVTL 352
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A504YS73 (Rhodopsin orphan GPCR OS=Fasciola gigantica OX=46835 GN=FGIG_02002 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.011e-52 Identity = 136/349 (38.97%), Postives = 197/349 (56.45%), Query Frame = 1 Query: 1 NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKY-KVFTKSTRIWFLALAASDISTILIATSDNYLALTFS-NFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKTSE---------------CLR---KEYLGNV---ISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAI 978 +SS +I I +YFFSW+++L NL + LC V++K+ +VF STR WF+A+ SD T+L+A +D Y + F ++H G + C +R I+++ W+ N+LQ+G S+ER S+I PL+ R T ++ I+ + + CG ++ + +D K E C R LG + + +TKIVY+ DLI+FR IP M+I S IIA ++ + KR K + N SN RESQ +LLL MN L+TNPLFLIFELIDGEGSE + GKL+G+ C++ +L +FNCL+Y NN TNWIFYI G RF+ V + Sbjct: 10 DSSRYIADGFI-SYFFSWYIVLANLTATVFSGLCFFVLIKHPRVFASSTRAWFMAITVSDFFTLLLAANDMYAEVMFPMSYHRLLFNVFGRYNCMVRLSLILSLGWSSNLLQTGLSLERLASVIAPLRTRALTTGRLTRFTILGIIIFS--CGIAIGVNILSYDPKYMESGETQKEPGNEMPLACDRVNGSTLLGEMNVNLDLTKIVYHIDLIMFRAIPFGTMLISSAIIASLIRCQRKRRTKLIGANSVLQQRQLYSGSN---RESQASLLLLTMNLTTLITNPLFLIFELIDGEGSEGRTSGKLTGNICVTWVLRQMFNCLLYFNNQTNWIFYIAFGARFRHHIVTL 352
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A430QH60 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Schistosoma bovis OX=6184 GN=DC041_0001707 PE=4 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.551e-49 Identity = 131/337 (38.87%), Postives = 188/337 (55.79%), Query Frame = 1 Query: 40 YFFSWFLLLVNLVSLFGCCLCLGVILKY-KVFTKSTRIWFLALAASDISTILIATSDNYLALTFSN-FHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKT-------------------SECLRK---EYLGNV---ISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNIS---GRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFK 960 YFFSW++++ N++ + LC V+LK+ +VF +TR WF+ L ASD +LIA +D Y + F++ +H+ G + C IR IV + WT N+LQ+G SIER S+I PL+ R+ T ++ I +L + + + G +T VS K + C R+ E GN I +TK+VY DLIVFR IP + M+I S +IA ++++ ++ NR T S + N S RES+ +LLL MN + LLTNPLFL+FEL DGEGSE + KL+GD C+S IL FN L+Y N NWI Y+ G RF+ Sbjct: 22 YFFSWYMIIANIIGIIFSGLCFLVLLKHPRVFASTTRAWFITLTASDFFILLIAANDMYAEVIFTHMYHIILGNIFGRYTCLIRVITIVCLLWTSNLLQTGLSIERLASVISPLKTRIIFTGKVTRYTISLLITFSCLSGILITIVSSKPSSSNIFMITNNNLTNYSIDYEALVSCERRNSTELFGNTHESIDLTKLVYNLDLIVFRVIPFITMLISSAVIASLVRYQRRKR------NRLTRISSIIQKRNRSIGYNRESRASLLLLTMNIITLLTNPLFLLFELFDGEGSEGRTAAKLTGDLCISWILRQFFNSLIYFGNQNNWILYLAFGARFR 352
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A094ZIN4 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Schistosoma haematobium OX=6185 GN=MS3_02621 PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.997e-49 Identity = 131/337 (38.87%), Postives = 188/337 (55.79%), Query Frame = 1 Query: 40 YFFSWFLLLVNLVSLFGCCLCLGVILKY-KVFTKSTRIWFLALAASDISTILIATSDNYLALTFSN-FHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKT-------------------SECLRK---EYLGNV---ISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNIS---GRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFK 960 YFFSW++++ N++ + LC V+LK+ +VF +TR WF+ L ASD +LIA +D Y + F++ +H+ G + C IR IV + WT N+LQ+G SIER S+I PL+ R+ T ++ I +L + + + G +T VS K + C R+ E GN I +TK+VY DLIVFR IP + M+I S +IA ++++ ++ NR T S + N S RES+ +LLL MN + LLTNPLFL+FEL DGEGSE + KL+GD C+S IL FN L+Y N NWI Y+ G RF+ Sbjct: 22 YFFSWYMIIANIIGIIFSGLCFLVLLKHPRVFASTTRAWFITLTASDFFILLIAANDMYAEVIFTHMYHIILGNIFGRYTCLIRVITIVCLLWTSNLLQTGLSIERLASVISPLKTRIIFTGKVTRYTISLLITFSCLSGILITIVSSKPSSSNIFMITNNNITNYSIDYEALVSCERRNSTELFGNTHESIDLTKLVYNLDLIVFRVIPFITMLISSAVIASLVRYQRRKR------NRLTRISSIIQKRNRSIGYNRESRASLLLLTMNIITLLTNPLFLLFELFDGEGSEGRTAAKLTGDLCISWILRQFFNSLIYFGNQNNWILYLAFGARFR 352
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000055874.1 (SMESG000055874.1) HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1 Query: 1 NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFSNFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKTSECLRKEYLGNVISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHWYQKLCLCFRFQTKMDAKVSFRSNNAV 1068 NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFSNFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKLVIIILTSVTLICGFSVTAVSMKFDTKTSECLRKEYLGNVISITKIVYYTDLIVFRTIPLLIMIIGSFIIAISMKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHWYQKLCLCFRFQTKMDAKVSFRSNNAV Sbjct: 8 NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFSNFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKLVIIILTSVTLICGFSVTAVSMKFDTKTSECLRKEYLGNVISITKIVYYTDLIVFRTIPLLIMIIGSFIIAISMKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHWYQKLCLCFRFQTKMDAKVSFRSNNAV 363
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000009916.1 (SMESG000009916.1) HSP 1 Score: 254.603 bits (649), Expect = 7.742e-82 Identity = 146/324 (45.06%), Postives = 212/324 (65.43%), Query Frame = 1 Query: 1 NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFS-NFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKT---SECLRKEYLGNVISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFK 960 NSS+++ F+ + Y SWFL+ +NL ++FG LC+ VI+KY VF+ +T+ WFLAL SDI I +A +D Y L F+ + L + + FFGCQ R+G +VA+SW CN LQ+G S+ER+I II P++ARVF T RS+++II L ++ + G + +++ + S C+RK TK VY+ DLI+FR +P ++ I + I+ I +K R + K+ R+S GK+ E ++F+LL++MN + L TNPLFL+FELIDGE +EN FGKL+GDKCLS ILT+ FN LMY NN TNWIFYI +G++F+ Sbjct: 8 NSSHWMVFEYFQYYILSWFLITINLSAIFGSGLCICVIVKYNVFSVNTKYWFLALIISDIVIIFVAANDFYFTLIFNEQYKLFLLHFSAFFGCQFRYGLVVAVSWVCNALQTGLSLERTIHIISPIKARVFFTVKRSRIIIIFLVIISGMSGLIINICTLEVKPTSKNVSSCVRKP------DQTKFVYFIDLILFRALPYGVITITTVILIIFIK-RRQNCRKFTL--HRSSRTPGGKNELNLNPERRMFILLIVMNVITLTTNPLFLLFELIDGEATENMVFGKLTGDKCLSTILTSFFNELMYMNNLTNWIFYINVGSKFR 322
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000026034.1 (SMESG000026034.1) HSP 1 Score: 210.305 bits (534), Expect = 3.765e-64 Identity = 125/318 (39.31%), Postives = 195/318 (61.32%), Query Frame = 1 Query: 40 YFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFSNFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSM-KFDTKTSECLRKEYLGNVISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXKFRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHW 990 Y FSW L++L +FG +C+ VI+K++VF T+ WF+ L+ SD ++I D Y +++ T+ + FGC++R+ AI SW N+LQ+G SIER+IS++ P+++R+ T R+K I++ + C S + + M F+ C RK + + I +T +Y DLI+FR IP L+M+I S II I MK S+K +I N K S RE ++ V+L+ MN L+TNPLFLIFELIDG GSE +++GKL+ ++C+S+ +FN L+Y NN TNWIFY++IG +F+ + + I+S++ Sbjct: 21 YCFSWSFALLSLAGIFGSLMCIIVIVKHRVFIHGTKYWFIYLSMSDFLMLIIPACDLYFYYMLEEYYIKTLNRMSIFGCELRYFAINFFSWNANVLQAGLSIERTISVLNPIRSRIIFTTGRTK---FIISVLIGFCFVSSSVIDMLTFERVNGTCRRKTHPNSSIDVTHSIYTIDLILFRAIPFLVMLISSIIIVILMKL---HSIKRDRIGHHQMGNPNKKSSQ-KYREFKMSVILISMNVATLVTNPLFLIFELIDGAGSEGQKYGKLTKNRCVSDFFNLLFNSLIYFNNQTNWIFYVLIGAKFQHYFLMILSNF 331
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000066767.1 (SMESG000066767.1) HSP 1 Score: 190.274 bits (482), Expect = 4.980e-57 Identity = 124/350 (35.43%), Postives = 206/350 (58.86%), Query Frame = 1 Query: 25 QLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFSNFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKTSECLRKEYLGNVISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXK-FRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHWYQKLCLCFRFQTKMDAK-VSFRSNNAV 1068 ++ Y SW L++ + L G LCL V+LKY VF+K+T+ WF +L +DI +L+ D Y + + S + G FGC+IR+ I ++SW N+LQS SIERS S+++P++AR+ T+ ++K +I+I+ +L+ G ++ + + + + +I+ I+Y DL +FR IP +IM S+II I ++ + KR+ ++I R + A S +E ++FVLL+ MN + LLTNPLF +FE IDG G+EN +G +GD C+S +L +FNC +Y NN +NWIFYI G +F+R+++ ++ + FRF +K + + + + NN + Sbjct: 19 EIFSQYILSWLFLILTIAGLCGNVLCLSVVLKYPVFSKNTKSWFCSLLIADILILLLPAMDLYFHVLLPELYPSLIARSGVFGCEIRYALIQSLSWLANLLQSSLSIERSYSVLRPMKARMLFTKTKTKSMILIIVMFSLVSGVLTNGLTFQRIPQGNSTICDRVRIERFNISHIIYNIDLFIFRVIPFIIMFTSSWIIIIELRCCKQKRNESNIRI-RNSKATSK--------KEFKMFVLLISMNVLTLLTNPLFALFETIDGVGTENYPYGLWTGDICMSKLLRLIFNCFIYLNNQSNWIFYIATGGKFRRYSLNVLR-------VIFRFHSKGNHESLRYSKNNQL 352
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000066767.1 (SMESG000066767.1) HSP 1 Score: 190.274 bits (482), Expect = 5.142e-57 Identity = 124/350 (35.43%), Postives = 206/350 (58.86%), Query Frame = 1 Query: 25 QLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIWFLALAASDISTILIATSDNYLALTFSNFHLSTMKYLGFFGCQIRFGAIVAISWTCNILQSGFSIERSISIIKPLQARVFLTEMRSKXXXXXXXXXXXXCGFSVTAVSMKFDTKTSECLRKEYLGNVISITKIVYYTDLIVFRTXXXXXXXXXXXXXXXXXK-FRTKRSVKYLQINRRTSAESNGKDSNISGRESQVFVLLLIMNFMALLTNPLFLIFELIDGEGSENKEFGKLSGDKCLSNILTTVFNCLMYTNNFTNWIFYIVIGTRFKRFTVAIISHWYQKLCLCFRFQTKMDAK-VSFRSNNAV 1068 ++ Y SW L++ + L G LCL V+LKY VF+K+T+ WF +L +DI +L+ D Y + + S + G FGC+IR+ I ++SW N+LQS SIERS S+++P++AR+ T+ ++K +I+I+ +L+ G ++ + + + + +I+ I+Y DL +FR IP +IM S+II I ++ + KR+ ++I R + A S +E ++FVLL+ MN + LLTNPLF +FE IDG G+EN +G +GD C+S +L +FNC +Y NN +NWIFYI G +F+R+++ ++ + FRF +K + + + + NN + Sbjct: 29 EIFSQYILSWLFLILTIAGLCGNVLCLSVVLKYPVFSKNTKSWFCSLLIADILILLLPAMDLYFHVLLPELYPSLIARSGVFGCEIRYALIQSLSWLANLLQSSLSIERSYSVLRPMKARMLFTKTKTKSMILIIVMFSLVSGVLTNGLTFQRIPQGNSTICDRVRIERFNISHIIYNIDLFIFRVIPFIIMFTSSWIIIIELRCCKQKRNESNIRI-RNSKATSK--------KEFKMFVLLISMNVLTLLTNPLFALFETIDGVGTENYPYGLWTGDICMSKLLRLIFNCFIYLNNQSNWIFYIATGGKFRRYSLNVLR-------VIFRFHSKGNHESLRYSKNNQL 362 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30034984 ID=SMED30034984|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1093bpback to top protein sequence of SMED30034984-orf-1 >SMED30034984-orf-1 ID=SMED30034984-orf-1|Name=SMED30034984-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=357bp NSSYFITFQLIKTYFFSWFLLLVNLVSLFGCCLCLGVILKYKVFTKSTRIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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