Adhesion G protein-coupled receptor L3
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30034960 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Zebrafish
Match: adgre5b.3 (adhesion G protein-coupled receptor E5b, duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-121214-275]) HSP 1 Score: 63.929 bits (154), Expect = 7.534e-10 Identity = 103/417 (24.70%), Postives = 192/417 (46.04%), Query Frame = 1 Query: 868 KIPLIYKQSLNSLDSNQRAKIS-NSIIKNVQNLMKNVSIEVKNKNSSYQQISDS---FVIYSSVVTKPQMLIPSLN---LKNETNVQFVEINIKEKDK-------IKTGSSLV-----------------ANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERYKNSDIMYLSLS----RHTNLTVNFILRKIN-KLQSPSWLYLYEEECGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPI-NAWHL-LVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWI 2004 ++P+ K+ L+ L S+ A ++ + K + LM+N+ + S+ + D V+ +V +++ P L ++ ET+ + E+ + + TGS+L + + YKDM+ + F+ N R K+ D +N T + NS ++ + +S +H + V+ I + + +S + Y C Y + S+ +WS +GC+ + +H C C HLS+FA+L ++ P+ + + L L+T + S + + + F R+ + L++++CL I ++F+ G ++ N++AC + A L FFFLSAF W L+ GV + RM+ + + L Y + Y V +IV +S I K YG D CW+ Sbjct: 220 EMPIKLKELLSQLRSSCEALVTPDGERKTGEQLMENLFTSTDDLLSA-GSVGDGETLSVLLDTVENSMRLICPQLKEPVMRMETHNTYAEVAVTRNQTPPSGSVILSTGSALFNTSWETVVGKSYPGFAFVSLVSYKDMNSSSNLFR--NVSRKKS----DMEENVTHKL-----NSKVVTVVVSNPDTKHLSEPVSLIFTHVEERAESKAVAY----NCVYWAE-SERAWSRQGCERAWSNSTHTECSCSHLSSFAVLMSLYPVQDTFELVLITRVGLVLSLLCLFLCILTFRFCRSIQGTRNSI---HLHLSVCLFIADLVFLCGISSTHNQVACAIVAGLLHFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYMYAVG-----YGVPLVIVSISAIAFPKGYG--TDRHCWL 609
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Zebrafish
Match: adgre5b.2 (adhesion G protein-coupled receptor E5b, duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-121214-277]) HSP 1 Score: 57.3806 bits (137), Expect = 7.077e-8 Identity = 84/312 (26.92%), Postives = 146/312 (46.79%), Query Frame = 1 Query: 1135 DKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERYKNSDIMYLSLSRHTNLTVNFILRKINKLQSPSWLYLYEEE----------CGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPINA--WHLLVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWIESQSPAFLTF 2034 K +G + VA F YKDM+ ++ ++ ++ KR + E+KI NS ++ T + N +K++ L + + +EEE C Y ++ S+ WS +GC + +H C HLS+FA+L + P+ +L+T + S + + + F R+ + L++++CL I ++F+ G ++ N++AC + A L FFFLSAF W L+ GV + RM+ + + L Y + Y V +IV +S IT K YG + CW+ + L+F Sbjct: 263 GKAYSGFAFVALFS-YKDMNSSSDLSHKTSRTLQED---SRKRLHVDEKKITYQLNSKVV-------TAVVSNPDTKKLSDLMMLT--FTHEEERAESGGVAYTCVYWNE-SEKVWSGRGCVKEWSNSTHTVCHWSHLSSFAVLMALYPVQDTFASVLITRVGLVLSLLCLFLCILTFRFCRSIQGTRNSI---HLHLSVCLFIADLVFLCGISSTHNQVACAIVAGLLHFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYLYAVG-----YGVPLVIVSISAITFPKGYG--TNKHCWLSLEGYLILSF 550
BLAST of Adhesion G protein-coupled receptor L3 vs. TrEMBL
Match: A0A193KUQ6 (GCR144 OS=Schmidtea mediterranea OX=79327 GN=gcr144 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.948e-44 Identity = 128/277 (46.21%), Postives = 181/277 (65.34%), Query Frame = 1 Query: 1654 NPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWIESQSPAFLTFXXXXXXXXXXXXXXXXXXXXHLFKHFIKSRKIKVNKSNESIIFFQLVITMGMTWVPSYFAIVYLEAMYMWIICFPLQGXXXXXXXXXINKENRAKVSSFVKDKYNSLISKTSQLSPSNFDSKFKSR------SVSKTSRAFIVDESETNS 2466 N RDK+RL QLNI+ICLL GT++ + F+ N++ CK+ AL QF FLSAF WKLI G+N R + LKY+ E+ + K + LS YS+ IV SG W+ YGK D CWI+S L F+IPI IIL +N + L +I LF ++I++RK KVN+S E +IF QL++TMG+TWV +YF I +L A Y+++ICFPLQGL++ L VV+I++ENR+K+ +F+ KY+SL +K+S S D + R +V+K + VDE+E S Sbjct: 27 NSRDKMRLVQLNISICLLFGTVVILISDFSLHNQLLCKMMALSTQFLFLSAFVWKLILGINAFRGIVLLKYQQEDWMLKRPFVAVLSGYSIPLAIVSASGGLNWQKYGKDFLDGCWIQSD-IYLLWFLIPITIILFLNCIFLFLIGKALFHNYIRTRKTKVNESQEFLIFLQLMMTMGITWVTAYFGIFFLWAKYIFVICFPLQGLMMFLFVVIISQENRSKLINFISTKYSSLTTKSSSHSEEKRDFTTRQRTNSSNLAVNKILLSSFVDETEIVS 302
BLAST of Adhesion G protein-coupled receptor L3 vs. TrEMBL
Match: E7F287 (Adhesion G protein-coupled receptor E5b, duplicate 3 OS=Danio rerio OX=7955 GN=adgre5b.3 PE=1 SV=3) HSP 1 Score: 63.929 bits (154), Expect = 1.686e-6 Identity = 103/417 (24.70%), Postives = 192/417 (46.04%), Query Frame = 1 Query: 868 KIPLIYKQSLNSLDSNQRAKIS-NSIIKNVQNLMKNVSIEVKNKNSSYQQISDS---FVIYSSVVTKPQMLIPSLN---LKNETNVQFVEINIKEKDK-------IKTGSSLV-----------------ANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERYKNSDIMYLSLS----RHTNLTVNFILRKIN-KLQSPSWLYLYEEECGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPI-NAWHL-LVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWI 2004 ++P+ K+ L+ L S+ A ++ + K + LM+N+ + S+ + D V+ +V +++ P L ++ ET+ + E+ + + TGS+L + + YKDM+ + F+ N R K+ D +N T + NS ++ + +S +H + V+ I + + +S + Y C Y + S+ +WS +GC+ + +H C C HLS+FA+L ++ P+ + + L L+T + S + + + F R+ + L++++CL I ++F+ G ++ N++AC + A L FFFLSAF W L+ GV + RM+ + + L Y + Y V +IV +S I K YG D CW+ Sbjct: 220 EMPIKLKELLSQLRSSCEALVTPDGERKTGEQLMENLFTSTDDLLSA-GSVGDGETLSVLLDTVENSMRLICPQLKEPVMRMETHNTYAEVAVTRNQTPPSGSVILSTGSALFNTSWETVVGKSYPGFAFVSLVSYKDMNSSSNLFR--NVSRKKS----DMEENVTHKL-----NSKVVTVVVSNPDTKHLSEPVSLIFTHVEERAESKAVAY----NCVYWAE-SERAWSRQGCERAWSNSTHTECSCSHLSSFAVLMSLYPVQDTFELVLITRVGLVLSLLCLFLCILTFRFCRSIQGTRNSI---HLHLSVCLFIADLVFLCGISSTHNQVACAIVAGLLHFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYMYAVG-----YGVPLVIVSISAIAFPKGYG--TDRHCWL 609
BLAST of Adhesion G protein-coupled receptor L3 vs. TrEMBL
Match: A0A498M339 (CD97 antigen-like protein OS=Labeo rohita OX=84645 GN=ROHU_028188 PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.498e-6 Identity = 64/198 (32.32%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 1417 CGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPI-NAWHL-LVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWI 2004 C Y D+ ++ +WS +GC+ + +H C C HLS+FA+L + P+ + + L L+T S + + + F R + L+++ICL I +IF+ G ++ NK+ C + A L FFFLSAF W L+ GV + RM+ + + L Y L Y V +IV +S I K YG D CW+ Sbjct: 391 CVYWDE-TEGAWSGRGCERAWSNSTHTACSCSHLSSFAVLMALYPVQDTFELVLITRLGLALSLVCLFLCILTFRFCRSIQGTRTSI---HLHLSICLFIADLIFLCGISSTQNKVGCAIVAGLLHFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYLY-----LVGYGVPLVIVIISAIAYPKGYG--TDRHCWL 577
BLAST of Adhesion G protein-coupled receptor L3 vs. TrEMBL
Match: A0A498P3U8 (CD97 antigen-like protein OS=Labeo rohita OX=84645 GN=ROHU_000272 PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.213e-6 Identity = 64/198 (32.32%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 1417 CGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPI-NAWHL-LVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWI 2004 C Y D+ ++ +WS +GC+ + +H C C HLS+FA+L + P+ + + L L+T S + + + F R + L+++ICL I +IF+ G ++ NK+ C + A L FFFLSAF W L+ GV + RM+ + + L Y L Y V +IV +S I K YG D CW+ Sbjct: 415 CVYWDE-TEGAWSGRGCERAWSNSTHTACSCSHLSSFAVLMALYPVQDTFELVLITRLGLALSLVCLFLCILTFRFCRSIQGTRTSI---HLHLSICLFIADLIFLCGISSTQNKVGCAIVAGLLHFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYLY-----LVGYGVPLVIVIISAIAYPKGYG--TDRHCWL 601
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Nematostella
Match: EDO48598 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ05]) HSP 1 Score: 49.2914 bits (116), Expect = 3.412e-6 Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 1396 LYLYEEECGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKP 1551 L + E C Y DK SWS +GCK+ + + SH +C CDHL++F F + P Sbjct: 8 LKVSEASCMYFDKMIG-SWSNEGCKVRQSNSSHVHCLCDHLTSFGGDFLVAP 58
BLAST of Adhesion G protein-coupled receptor L3 vs. Planmine SMEST
Match: SMESG000009859.1 (SMESG000009859.1) HSP 1 Score: 751.895 bits (1940), Expect = 0.000e+0 Identity = 394/401 (98.25%), Postives = 399/401 (99.50%), Query Frame = 1 Query: 97 FKRNLLLFVYLFCINFNIFANLQNLYSIKNRYGEIRRDNCVSTCFDLKPSNLVLEISDSDNKTSKSIAIIYKCPINEIDVYDPLFNKNKYVKLCGNRIETCEPNLVNIKYAPVKQTTKNQYKIXXXXXXXXXXXXIFYKYITCKQEPLRFSLKIDKHFLYQNQIIFPFNVMRQIRMPNKNVVIKLSIWKNANEHLTEIDFYITKNRTDIVSFTESNFY-TSKLTNEQNIKSFVSIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSIEVKNKNSSYQQISDSFVIYSSVVTKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERY 1296 FKRNLLLFVYLFCINFNIFANLQNLYS+KNRYGEIRRDNCVSTCFDLKPSNLVLEISDSDNKTSKSIAIIYKCPINEIDVYDPLFNKNKYVKLCGNRIETCEPN+VNIKYAPVKQTTKNQYKIPVSVVVPHSSSSIFYKYITCKQEPLRFSLKIDK+FLYQNQIIFPFNVMRQ+ +PNKNVVIKLSIWKNANEHLTEIDFYITKNRTDIVSFTESNFY TSKLTNEQNIKSFVSIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSIEVKNKNSSYQQISDSFVIYSSVVTKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERY Sbjct: 8 FKRNLLLFVYLFCINFNIFANLQNLYSVKNRYGEIRRDNCVSTCFDLKPSNLVLEISDSDNKTSKSIAIIYKCPINEIDVYDPLFNKNKYVKLCGNRIETCEPNMVNIKYAPVKQTTKNQYKIPVSVVVPHSSSSIFYKYITCKQEPLRFSLKIDKNFLYQNQIIFPFNVMRQMSLPNKNVVIKLSIWKNANEHLTEIDFYITKNRTDIVSFTESNFYTTSKLTNEQNIKSFVSIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSIEVKNKNSSYQQISDSFVIYSSVVTKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERY 408
BLAST of Adhesion G protein-coupled receptor L3 vs. Planmine SMEST
Match: SMESG000009859.1 (SMESG000009859.1) HSP 1 Score: 750.74 bits (1937), Expect = 0.000e+0 Identity = 394/401 (98.25%), Postives = 399/401 (99.50%), Query Frame = 1 Query: 97 FKRNLLLFVYLFCINFNIFANLQNLYSIKNRYGEIRRDNCVSTCFDLKPSNLVLEISDSDNKTSKSIAIIYKCPINEIDVYDPLFNKNKYVKLCGNRIETCEPNLVNIKYAPVKQTTKNQYKIXXXXXXXXXXXXIFYKYITCKQEPLRFSLKIDKHFLYQNQIIFPFNVMRQIRMPNKNVVIKLSIWKNANEHLTEIDFYITKNRTDIVSFTESNFY-TSKLTNEQNIKSFVSIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSIEVKNKNSSYQQISDSFVIYSSVVTKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERY 1296 FKRNLLLFVYLFCINFNIFANLQNLYS+KNRYGEIRRDNCVSTCFDLKPSNLVLEISDSDNKTSKSIAIIYKCPINEIDVYDPLFNKNKYVKLCGNRIETCEPN+VNIKYAPVKQTTKNQYKIPVSVVVPHSSSSIFYKYITCKQEPLRFSLKIDK+FLYQNQIIFPFNVMRQ+ +PNKNVVIKLSIWKNANEHLTEIDFYITKNRTDIVSFTESNFY TSKLTNEQNIKSFVSIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSIEVKNKNSSYQQISDSFVIYSSVVTKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERY Sbjct: 4 FKRNLLLFVYLFCINFNIFANLQNLYSVKNRYGEIRRDNCVSTCFDLKPSNLVLEISDSDNKTSKSIAIIYKCPINEIDVYDPLFNKNKYVKLCGNRIETCEPNMVNIKYAPVKQTTKNQYKIPVSVVVPHSSSSIFYKYITCKQEPLRFSLKIDKNFLYQNQIIFPFNVMRQMSLPNKNVVIKLSIWKNANEHLTEIDFYITKNRTDIVSFTESNFYTTSKLTNEQNIKSFVSIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSIEVKNKNSSYQQISDSFVIYSSVVTKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKNLIIHDKRQNFTERKIERY 404
BLAST of Adhesion G protein-coupled receptor L3 vs. Planmine SMEST
Match: SMESG000009861.1 (SMESG000009861.1) HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0 Identity = 366/367 (99.73%), Postives = 367/367 (100.00%), Query Frame = 1 Query: 1531 MLFTIKPINAWHLLVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWIESQSPAFLTFXXXXXXXXXXXXXXXXXXXXHLFKHFIKSRKIKVNKSNESIIFFQLVITMGMTWVPSYFAIVYLEAMYMWIICFPLQGXXXXXXXXXINKENRAKVSSFVKDKYNSLISKTSQLSPSNFDSKFKSRSVSKTSRAFIVDESETNSTLLNSPNENKLLLSETSTPNFQFKELVNKVKQASESNTPGKVLLVPGSQPIFFKS 2631 MLFTIKPINAWHLLVTGHLSIFSGIINIISLSLFLTFILHINPRDKLRLDQLNIAICLLIGTIIFIFGGFNSMNKIACKLTALLAQFFFLSAFNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIAD+VCWIESQSPAFLTFIIPIGIILVVNIVCLIVISIHLFKHFIKSRKIKVNKSNESIIFFQLVITMGMTWVPSYFAIVYLEAMYMWIICFPLQGLLLMLLVVVINKENRAKVSSFVKDKYNSLISKTSQLSPSNFDSKFKSRSVSKTSRAFIVDESETNSTLLNSPNENKLLLSETSTPNFQFKELVNKVKQASESNTPGKVLLVPGSQPIFFKS Sbjct: 1 MLFTIKPINAWHLLVTGHLSIFSGIINIISLSLFLTFILHINPRDKLRLDQLNIAICLLIGTIIFIFGGFNSMNKIACKLTALLAQFFFLSAFNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADNVCWIESQSPAFLTFIIPIGIILVVNIVCLIVISIHLFKHFIKSRKIKVNKSNESIIFFQLVITMGMTWVPSYFAIVYLEAMYMWIICFPLQGLLLMLLVVVINKENRAKVSSFVKDKYNSLISKTSQLSPSNFDSKFKSRSVSKTSRAFIVDESETNSTLLNSPNENKLLLSETSTPNFQFKELVNKVKQASESNTPGKVLLVPGSQPIFFKS 367
BLAST of Adhesion G protein-coupled receptor L3 vs. Planmine SMEST
Match: SMESG000009827.1 (SMESG000009827.1) HSP 1 Score: 347.436 bits (890), Expect = 2.954e-104 Identity = 255/582 (43.81%), Postives = 369/582 (63.40%), Query Frame = 1 Query: 793 SIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSI-EVKNKNSSYQQISDSFVIYSSVV--TKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKN-LIIHDKRQNFTERKIERYKNSDIMYLSLSRHTNLTVNFILRKINKLQSPSWLYLYEEECGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPINAWHLLVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWIESQSPAFLTFXXXXXXXXXXXXXXXXXXXXHLFKHFIKSRKIKVNKSNESIIFFQLVITMGMTWVPSYFAIVYLEAMYMWIICFPLQGXXXXXXXXXINKENRAKVSSFVKDKYNSLISKTSQLSPSNFDSKFKSRSVSKTSRAFIVDESETNSTLLNSPNENKLLLSETSTPN 2526 + F I N++ + KL+ + K+ +K +D Q+ S +++ ++ + + + E+ +S + S+ + Y+S + T+ + +IP K FV++ ++ I+T L+ FI +KD+D+++E + + +I+N + L + D + +ER+KNSD + LSL+ N+T+ F L K+QS WLY +EEECGYL + +W WS GC+ V S + YC CDHLSNFAMLF++K +N HL + +LS+F IINI+SL FLTF+L IN RDKLRLDQLNIAICLL+GTI F G ++N+I C++ A+ QF FLSAF WKLI G+NV+RM+A L+Y+NE+ + KYR+ + Y + +IV +SG W YG I+DDVCWI+S S AFLTFIIPIGIIL VN++ L I L ++++ +RK KVN+SNE ++F QL +MG+TW+PSYFA VYL AMYMW++ FPLQGL++ L VVVIN+ENR KVSSFV +KY+SLISK++ S + SK KS + SK +E N +LL S E + PN Sbjct: 445 AFFKSIVNKSLSGDAKLNILMKETRKLSNNFKNVFTKVDVRQKKNTSRFLLRQIEKYVDQIFLKELDMNQTSLTRSSEEYDAYTSYIDETENEHVIPFSENKTHPEPLFVKLKLQTNGNIQTSEKLITTFIRFKDLDLIDESKKAELKIQNSSELKLKD------DDVVERFKNSDFISLSLNHKRNVTIQFKLPTFQKVQSQIWLYSFEEECGYLADDKNWEWSVDGCRKVIESSNQFYCECDHLSNFAMLFSVKTVNVIHLTIFKYLSVFGTIINILSLVFFLTFVLWINSRDKLRLDQLNIAICLLLGTIAFSLGSVVAVNQIFCQIVAIFTQFLFLSAFVWKLILGINVVRMIASLRYQNEDWMVKYRLVTLGVGYGIPLVIVIISGSIYWSAYGSISDDVCWIKSSSKAFLTFIIPIGIILAVNLIALFFIGNALIRNYLDTRKTKVNESNELMVFMQLFASMGLTWLPSYFATVYLVAMYMWVLFFPLQGLMMFLFVVVINRENREKVSSFVIEKYSSLISKSTSSSDTRTHSKSKSTTHSKV--------TEHNQSLL-SETEKDMAFPMIKIPN 1011
BLAST of Adhesion G protein-coupled receptor L3 vs. Planmine SMEST
Match: SMESG000009827.1 (SMESG000009827.1) HSP 1 Score: 347.821 bits (891), Expect = 4.186e-104 Identity = 255/582 (43.81%), Postives = 369/582 (63.40%), Query Frame = 1 Query: 793 SIFDKIFNENQNYKVKLSKALSMVTKIPLIYKQSLNSLDSNQRAKISNSIIKNVQNLMKNVSI-EVKNKNSSYQQISDSFVIYSSVV--TKPQMLIPSLNLKNETNVQFVEINIKEKDKIKTGSSLVANFILYKDMDIMNEYFQIQNQIRNKN-LIIHDKRQNFTERKIERYKNSDIMYLSLSRHTNLTVNFILRKINKLQSPSWLYLYEEECGYLDKNSDWSWSTKGCKIVKGSDSHHYCRCDHLSNFAMLFTIKPINAWHLLVTGHXXXXXXXXXXXXXXXXXXXXXXXNPRDKLRLDQLNIAICLLXXXXXXXXXXXNSMNKIACKXXXXXXXXXXXXXXNWKLIYGVNVIRMMAFLKYENENKLRKYRIASTLSSYSVSFLIVFLSGITQWKYYGKIADDVCWIESQSPAFLTFXXXXXXXXXXXXXXXXXXXXHLFKHFIKSRKIKVNKSNESIIFFQLVITMGMTWVPSYFAIVYLEAMYMWIICFPLQGXXXXXXXXXINKENRAKVSSFVKDKYNSLISKTSQLSPSNFDSKFKSRSVSKTSRAFIVDESETNSTLLNSPNENKLLLSETSTPN 2526 + F I N++ + KL+ + K+ +K +D Q+ S +++ ++ + + + E+ +S + S+ + Y+S + T+ + +IP K FV++ ++ I+T L+ FI +KD+D+++E + + +I+N + L + D + +ER+KNSD + LSL+ N+T+ F L K+QS WLY +EEECGYL + +W WS GC+ V S + YC CDHLSNFAMLF++K +N HL + +LS+F IINI+SL FLTF+L IN RDKLRLDQLNIAICLL+GTI F G ++N+I C++ A+ QF FLSAF WKLI G+NV+RM+A L+Y+NE+ + KYR+ + Y + +IV +SG W YG I+DDVCWI+S S AFLTFIIPIGIIL VN++ L I L ++++ +RK KVN+SNE ++F QL +MG+TW+PSYFA VYL AMYMW++ FPLQGL++ L VVVIN+ENR KVSSFV +KY+SLISK++ S + SK KS + SK +E N +LL S E + PN Sbjct: 472 AFFKSIVNKSLSGDAKLNILMKETRKLSNNFKNVFTKVDVRQKKNTSRFLLRQIEKYVDQIFLKELDMNQTSLTRSSEEYDAYTSYIDETENEHVIPFSENKTHPEPLFVKLKLQTNGNIQTSEKLITTFIRFKDLDLIDESKKAELKIQNSSELKLKD------DDVVERFKNSDFISLSLNHKRNVTIQFKLPTFQKVQSQIWLYSFEEECGYLADDKNWEWSVDGCRKVIESSNQFYCECDHLSNFAMLFSVKTVNVIHLTIFKYLSVFGTIINILSLVFFLTFVLWINSRDKLRLDQLNIAICLLLGTIAFSLGSVVAVNQIFCQIVAIFTQFLFLSAFVWKLILGINVVRMIASLRYQNEDWMVKYRLVTLGVGYGIPLVIVIISGSIYWSAYGSISDDVCWIKSSSKAFLTFIIPIGIILAVNLIALFFIGNALIRNYLDTRKTKVNESNELMVFMQLFASMGLTWLPSYFATVYLVAMYMWVLFFPLQGLMMFLFVVVINRENREKVSSFVIEKYSSLISKSTSSSDTRTHSKSKSTTHSKV--------TEHNQSLL-SETEKDMAFPMIKIPN 1038 The following BLAST results are available for this feature:
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 4
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Adhesion G protein-coupled receptor L3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Adhesion G protein-coupled receptor L3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30034960 ID=SMED30034960|Name=Adhesion G protein-coupled receptor L3|organism=Schmidtea mediterranea sexual|type=transcript|length=2721bpback to top protein sequence of SMED30034960-orf-1 >SMED30034960-orf-1 ID=SMED30034960-orf-1|Name=SMED30034960-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=853bp MIILMVIFKRNLLLFVYLFCINFNIFANLQNLYSIKNRYGEIRRDNCVSTback to top Annotated Terms
The following terms have been associated with this transcript:
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