Tubulin beta chain
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30034805 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of Tubulin beta chain vs. Ensembl Human
Match: TUBB4A (tubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]) HSP 1 Score: 181.8 bits (460), Expect = 2.760e-60 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGG YVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Human
Match: TUBB4A (tubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]) HSP 1 Score: 182.57 bits (462), Expect = 9.207e-60 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGG YVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 46 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 152
BLAST of Tubulin beta chain vs. Ensembl Human
Match: TUBB4A (tubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]) HSP 1 Score: 179.874 bits (455), Expect = 8.038e-59 Identity = 76/106 (71.70%), Postives = 92/106 (86.79%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHY 371 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGG YVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHY Sbjct: 52 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 157
BLAST of Tubulin beta chain vs. Ensembl Human
Match: TUBB4B (tubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]) HSP 1 Score: 186.422 bits (472), Expect = 6.180e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Human
Match: TUBB2B (tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]) HSP 1 Score: 185.267 bits (469), Expect = 1.880e-57 Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATG KYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Celegans
Match: ben-1 (Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:Q18817]) HSP 1 Score: 186.422 bits (472), Expect = 2.234e-58 Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G KFWE++SDEHG+ P G Y+GESDLQLERINVYY EA GGKYVPRA+L DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Celegans
Match: tbb-4 (Tubulin beta-4 chain [Source:UniProtKB/Swiss-Prot;Acc:P41937]) HSP 1 Score: 186.037 bits (471), Expect = 3.982e-58 Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EA+GGKYVPRA L DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Celegans
Match: tbb-1 (Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:O17921]) HSP 1 Score: 182.185 bits (461), Expect = 1.234e-56 Identity = 76/107 (71.03%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G+KFWE++SDEHG+ P G ++GESDLQLERI+VYY EA GKYVPRA+L DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Celegans
Match: tbb-1 (Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:O17921]) HSP 1 Score: 182.185 bits (461), Expect = 1.234e-56 Identity = 76/107 (71.03%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G+KFWE++SDEHG+ P G ++GESDLQLERI+VYY EA GKYVPRA+L DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Celegans
Match: tbb-2 (Tubulin beta-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P52275]) HSP 1 Score: 181.03 bits (458), Expect = 3.058e-56 Identity = 75/107 (70.09%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G+KFWE++SDEHG+ P G ++GE+DLQLERI+VYY EA GKYVPRA+L DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Fly
Match: betaTub56D (gene:FBgn0284243 transcript:FBtr0086536) HSP 1 Score: 183.341 bits (464), Expect = 5.434e-57 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWEI+SDEHG+D G Y G+SDLQLERINVYY EA+GGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Fly
Match: betaTub97EF (gene:FBgn0003890 transcript:FBtr0334906) HSP 1 Score: 179.104 bits (453), Expect = 2.755e-55 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G+KFWEI+SDEHG+DP G Y GES LQ ERI+VYY EA+ GKYVPRA+L DLEP TM+++R SP GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Fly
Match: betaTub97EF (gene:FBgn0003890 transcript:FBtr0300611) HSP 1 Score: 179.104 bits (453), Expect = 3.065e-55 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G+KFWEI+SDEHG+DP G Y GES LQ ERI+VYY EA+ GKYVPRA+L DLEP TM+++R SP GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Fly
Match: betaTub85D (gene:FBgn0003889 transcript:FBtr0082046) HSP 1 Score: 175.252 bits (443), Expect = 5.612e-54 Identity = 75/107 (70.09%), Postives = 90/107 (84.11%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEH +D G Y G+SDLQLERINVYY EATG KYVPRAIL DLEP TM+++R +GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Fly
Match: betaTub60D (gene:FBgn0003888 transcript:FBtr0343443) HSP 1 Score: 174.866 bits (442), Expect = 1.057e-53 Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEAT-----GGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV +Q GQCGNQ+G KFWEI+S+EHG+D G+Y G+SDLQLER++VYY EA+ GGKYVPRAIL DLEP TME++R PYGQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASVTRSSGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYT 112
BLAST of Tubulin beta chain vs. Ensembl Zebrafish
Match: zgc:55461 (zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]) HSP 1 Score: 186.422 bits (472), Expect = 8.709e-60 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Zebrafish
Match: zgc:55461 (zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]) HSP 1 Score: 186.422 bits (472), Expect = 8.709e-60 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Zebrafish
Match: zgc:55461 (zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]) HSP 1 Score: 186.037 bits (471), Expect = 4.710e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Zebrafish
Match: zgc:55461 (zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]) HSP 1 Score: 186.422 bits (472), Expect = 4.716e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Zebrafish
Match: zgc:55461 (zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]) HSP 1 Score: 186.422 bits (472), Expect = 4.716e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Xenopus
Match: reps2 (RALBP1 associated Eps domain containing 2 [Source:Xenbase;Acc:XB-GENE-985000]) HSP 1 Score: 186.422 bits (472), Expect = 5.542e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Xenopus
Match: ubxn11 (UBX domain protein 11 [Source:Xenbase;Acc:XB-GENE-985480]) HSP 1 Score: 185.267 bits (469), Expect = 1.615e-57 Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EA+GGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Xenopus
Match: tubb (tubulin beta class I [Source:NCBI gene;Acc:448742]) HSP 1 Score: 184.496 bits (467), Expect = 3.307e-57 Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQL+RI+VYY EATGGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Xenopus
Match: znf330 (zinc finger protein 330 [Source:Xenbase;Acc:XB-GENE-1010548]) HSP 1 Score: 184.111 bits (466), Expect = 4.369e-57 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATG K+VPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKFVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Xenopus
Match: tubb3 (tubulin beta 3 class III [Source:NCBI gene;Acc:395045]) HSP 1 Score: 174.096 bits (440), Expect = 3.109e-53 Identity = 75/107 (70.09%), Postives = 90/107 (84.11%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERI+VYY EA+ KYVPRAIL DLEP TM+++R +G LFRPDNFI+G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPCGNYIGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Mouse
Match: Tubb4b (tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472]) HSP 1 Score: 186.422 bits (472), Expect = 4.243e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Mouse
Match: Tubb2b (tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]) HSP 1 Score: 185.267 bits (469), Expect = 1.291e-57 Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATG KYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Mouse
Match: Tubb4a (tubulin, beta 4A class IVA [Source:MGI Symbol;Acc:MGI:107848]) HSP 1 Score: 184.496 bits (467), Expect = 2.133e-57 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGG YVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Mouse
Match: Tubb5 (tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]) HSP 1 Score: 184.496 bits (467), Expect = 2.505e-57 Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQL+RI+VYY EATGGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Mouse
Match: Tubb2a (tubulin, beta 2A class IIA [Source:MGI Symbol;Acc:MGI:107861]) HSP 1 Score: 183.726 bits (465), Expect = 5.241e-57 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EA G KYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. UniProt/SwissProt
Match: sp|P86221|TBB4B_MESAU (Tubulin beta-4B chain (Fragments) OS=Mesocricetus auratus OX=10036 GN=TUBB4B PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 7.605e-59 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. UniProt/SwissProt
Match: sp|P07436|TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum OX=5791 GN=BETA PE=1 SV=4) HSP 1 Score: 188.348 bits (477), Expect = 9.502e-58 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y GESDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGESDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQIFRPDNFVFGQTGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. UniProt/SwissProt
Match: sp|P34108|TBB_NAEPR (Tubulin beta chain OS=Naegleria pringsheimi OX=234921 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.635e-57 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGG+YVPRAIL DLEP TM+++R PYGQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGVDPTGAYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. UniProt/SwissProt
Match: sp|O17449|TBB1_MANSE (Tubulin beta-1 chain OS=Manduca sexta OX=7130 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.797e-57 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWEI+SDEHG+DP G Y G+SDLQLERINVYY EA+GGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. UniProt/SwissProt
Match: sp|Q9ZSW1|TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa OX=2762 GN=TUBB1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.875e-57 Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGG+YVPRA+L DLEP TM+++R PYGQLFRPDNFI+G G+ NNWAKGHYT Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. TrEMBL
Match: A0A183L5E4 (Tubulin beta chain OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS22558 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 4.474e-59 Identity = 81/107 (75.70%), Postives = 96/107 (89.72%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++QVGQCGNQ+G+KFWE++SDEHG+DP G YRG+SDLQLERINVYY EA GGKYVPRAIL DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQVGQCGNQIGSKFWEVISDEHGIDPTGAYRGDSDLQLERINVYYNEAMGGKYVPRAILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. TrEMBL
Match: A0A183NMA7 (Tubulin beta chain OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS3243 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 4.710e-59 Identity = 81/107 (75.70%), Postives = 96/107 (89.72%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++QVGQCGNQ+G+KFWE++SDEHG+DP G YRG+SDLQLERINVYY EA GGKYVPRAIL DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQVGQCGNQIGSKFWEVISDEHGIDPTGAYRGDSDLQLERINVYYNEAMGGKYVPRAILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. TrEMBL
Match: A0A183A726 (Tubulin domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS2761 PE=4 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.793e-59 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRAIL DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. TrEMBL
Match: W6UQH5 (Tubulin beta chain OS=Echinococcus granulosus OX=6210 GN=EGR_02075 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.174e-58 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. TrEMBL
Match: A0A1D2MQX8 (Tubulin beta-4B chain (S) OS=Orchesella cincta OX=48709 GN=Ocin01_11160 PE=4 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.466e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWEI+SDEHG+DP G Y G+SDLQLERINVYY EA+GGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Cavefish
Match: zgc:55461 (tubulin beta-4B chain [Source:NCBI gene;Acc:103024068]) HSP 1 Score: 186.422 bits (472), Expect = 4.083e-58 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Cavefish
Match: TUBB2A (tubulin beta-2A chain [Source:NCBI gene;Acc:103041736]) HSP 1 Score: 183.726 bits (465), Expect = 2.380e-56 Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 3 Query: 39 EYQPAMREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 E Q MREIV++Q GQCGNQ+G KFWE++SDEHG+D G Y+GES+LQLERINVYY EATG K+VPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 73 EQQNNMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGSYQGESELQLERINVYYNEATGSKFVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 184
BLAST of Tubulin beta chain vs. Ensembl Cavefish
Match: ENSAMXT00000040211.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000026.1:1408258:1413855:-1 gene:ENSAMXG00000041772.1 transcript:ENSAMXT00000040211.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 159.844 bits (403), Expect = 1.065e-51 Identity = 67/93 (72.04%), Postives = 83/93 (89.25%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWG 332 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQL+RI+VYY EATGGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
BLAST of Tubulin beta chain vs. Ensembl Cavefish
Match: ENSAMXT00000034689.1 (pep primary_assembly:Astyanax_mexicanus-2.0:24:9903821:9908953:1 gene:ENSAMXG00000030398.1 transcript:ENSAMXT00000034689.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 159.458 bits (402), Expect = 1.139e-51 Identity = 67/103 (65.05%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAK 362 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQL+RINVYY EA+GGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G S ++ Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLDRINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGITTHSGQISR 103
BLAST of Tubulin beta chain vs. Ensembl Cavefish
Match: ENSAMXT00000036235.1 (pep primary_assembly:Astyanax_mexicanus-2.0:6:34530374:34536014:1 gene:ENSAMXG00000040542.1 transcript:ENSAMXT00000036235.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 158.303 bits (399), Expect = 3.593e-51 Identity = 68/101 (67.33%), Postives = 86/101 (85.15%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNW 356 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQL+RINVYY EA+GGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G + NW Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGDK----NW 97
BLAST of Tubulin beta chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009623.1 (pep scaffold:Pmarinus_7.0:GL485233:4234:10583:1 gene:ENSPMAG00000008696.1 transcript:ENSPMAT00000009623.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 166.392 bits (420), Expect = 2.021e-54 Identity = 72/108 (66.67%), Postives = 90/108 (83.33%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRG-ESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ GQCGNQ+G+KFWE++S+EHG+D G YRG + LQ+ERINVYY+EAT GK+VPRAI+ DLEP TM+ +R P G +FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHVQAGQCGNQVGSKFWEVISEEHGIDRTGSYRGYNARLQMERINVYYSEATSGKFVPRAIMVDLEPGTMDAVRSGPLGHMFRPDNFVFGQSGAGNNWAKGHYT 108
BLAST of Tubulin beta chain vs. Ensembl Sea Lamprey
Match: tubb2 (tubulin, beta 2A class IIa [Source:ZFIN;Acc:ZDB-GENE-050522-384]) HSP 1 Score: 153.68 bits (387), Expect = 6.064e-47 Identity = 64/89 (71.91%), Postives = 78/89 (87.64%), Query Frame = 3 Query: 108 KFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 +FWE++SDEHG+DP G Y G+SDLQLERINVYY EA+GGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 QFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 89
BLAST of Tubulin beta chain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005307.1 (pep scaffold:Pmarinus_7.0:GL485425:14485:17012:-1 gene:ENSPMAG00000004835.1 transcript:ENSPMAT00000005307.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 95.1301 bits (235), Expect = 1.190e-26 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 57 REIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQ--LERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 RE + + VGQ G Q+G WE+ EHG+ P G E + + N +++E GK+VPRA+ DLEP+ + +R Y QLF P+ I G ++NN+A+GHYT Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSEKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVGAVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
BLAST of Tubulin beta chain vs. Ensembl Sea Lamprey
Match: TUBA3C (tubulin alpha 3c [Source:HGNC Symbol;Acc:HGNC:12408]) HSP 1 Score: 98.2117 bits (243), Expect = 5.670e-26 Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQL----ERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MRE + + VGQ G Q+G WE+ EHG+ P G + SD + + N +++E GK+VPRA+ DLEP+ ++ +R Y QLF P+ I G ++NN+A+GHYT Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
BLAST of Tubulin beta chain vs. Ensembl Sea Lamprey
Match: tubg1 (tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]) HSP 1 Score: 97.4413 bits (241), Expect = 2.693e-25 Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 57 REIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGAR--GSSNNWAKGH 368 REI+ +Q+GQCGNQ+G +FW+ + EHG+ P G+ + +R +V++ +A Y+PRA+L DLEP + +I S Y L+ P+N G+ NNWA GH Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPDGILEDFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVINSIVNSSYANLYNPENIYLSEHGGGAGNNWASGH 108
BLAST of Tubulin beta chain vs. Ensembl Yeast
Match: TUB2 (Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymerizes to form microtubules; mutation in human ortholog is associated with congenital fibrosis of the extraocular muscles (CFEOM) with polymicrogyria [Source:SGD;Acc:S000001857]) HSP 1 Score: 144.05 bits (362), Expect = 8.454e-43 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREI+++ GQCGNQ+G FWE + EHGLD G Y G D+Q ER+NVY+ EA+ GK+VPR+I DLEP T++ +R S G LFRPDN+I+G + N WAKGHYT Sbjct: 1 MREIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYHGHDDIQKERLNVYFNEASSGKWVPRSINVDLEPGTIDAVRNSAIGNLFRPDNYIFGQSSAGNVWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Yeast
Match: TUB1 (Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; relative distribution to nuclear foci increases upon DNA replication stress; TUB1 has a paralog, TUB3, that arose from the whole genome duplication [Source:SGD;Acc:S000004550]) HSP 1 Score: 97.8265 bits (242), Expect = 1.153e-25 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRG-LYRGESDLQ--LERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MRE++ + VGQ G Q+G WE+ S EHG+ P G L G S + E + ++ E GK+VPRAI DLEP+ ++ +R PY LF P+ I G ++NN+A+GHYT Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYT 110
BLAST of Tubulin beta chain vs. Ensembl Yeast
Match: TUB3 (Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p; TUB3 has a paralog, TUB1, that arose from the whole genome duplication [Source:SGD;Acc:S000004593]) HSP 1 Score: 89.3521 bits (220), Expect = 1.250e-22 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRG-LYRGESDLQ--LERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MRE++ + VGQ G Q+G WE+ S EHG+ G L G S + E + ++ E GK+VPRAI DLEP+ ++ +R + +LF P+ I G ++NN+A+GHYT Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYT 110
BLAST of Tubulin beta chain vs. Ensembl Yeast
Match: TUB4 (Gamma-tubulin; involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004202]) HSP 1 Score: 63.5438 bits (153), Expect = 1.798e-13 Identity = 37/108 (34.26%), Postives = 56/108 (51.85%), Query Frame = 3 Query: 60 EIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLER---INVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSS--NNWAKGH 368 EI+ +Q GQCGN +G W ++ EH + GL + D ER ++ E + K+ PRAI+ D EPS + + + G F P N + G+S N+WA G+ Sbjct: 4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQ-LPDSSTERDDDTKPFFRENSRNKFTPRAIMMDSEPSVIADVENTFRG-FFDPRNTWVASDGASAGNSWANGY 109
BLAST of Tubulin beta chain vs. Ensembl Nematostella
Match: EDO35973 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJX5]) HSP 1 Score: 185.652 bits (470), Expect = 1.445e-60 Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+ Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Nematostella
Match: EDO39945 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8I3]) HSP 1 Score: 186.808 bits (473), Expect = 9.932e-59 Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+ Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Nematostella
Match: EDO35958 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJX9]) HSP 1 Score: 183.341 bits (464), Expect = 1.727e-57 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV +Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPR++L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Nematostella
Match: EDO42890 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S027]) HSP 1 Score: 173.326 bits (438), Expect = 1.357e-53 Identity = 75/107 (70.09%), Postives = 90/107 (84.11%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFW +EHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFW----NEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 103
BLAST of Tubulin beta chain vs. Ensembl Nematostella
Match: EDO49518 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGG3]) HSP 1 Score: 142.895 bits (359), Expect = 6.093e-42 Identity = 61/109 (55.96%), Postives = 82/109 (75.23%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDL--QLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREI+ +QVGQCGNQ+GT+FW +++EHG+DP G D + +RI+VY+ E GG+YVPR+IL DLEP TM+ +RG P G +FRPDNF+ G++NNWAKGHY+ Sbjct: 1 MREIINIQVGQCGNQIGTEFWRDIAEEHGIDPTGAKSLIEDTHGRFDRIDVYFHEGNGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYS 109
BLAST of Tubulin beta chain vs. Ensembl Medaka
Match: tubb2 (tubulin beta-2B chain [Source:NCBI gene;Acc:101162245]) HSP 1 Score: 185.267 bits (469), Expect = 1.173e-57 Identity = 78/107 (72.90%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y+G+SDLQLERINVYY EA+G KYVPRAIL DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYQGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Medaka
Match: tubb5 (tubulin beta chain [Source:NCBI gene;Acc:101157969]) HSP 1 Score: 184.496 bits (467), Expect = 2.199e-57 Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQL+RI+VYY EATGGKYVPRAIL DLEP TM+++R P+GQ+FRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Medaka
Match: ENSORLT00000045809.1 (tubulin beta-6 chain [Source:NCBI gene;Acc:101166121]) HSP 1 Score: 173.711 bits (439), Expect = 4.619e-53 Identity = 76/107 (71.03%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV+VQ+GQCGNQ+G+KFWE++S+EHG++ G+Y G+S LQLERINVY++EA GGKYVPRA+L DLEP TM++IRGS G LFRPDNFI G G+ NNWAKGHYT Sbjct: 1 MREIVHVQIGQCGNQIGSKFWEVISEEHGINATGIYEGDSTLQLERINVYFSEAYGGKYVPRALLVDLEPGTMDSIRGSRIGALFRPDNFIHGNSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Ensembl Medaka
Match: ENSORLT00000047058.1 (pep primary_assembly:ASM223467v1:22:19910744:19912587:1 gene:ENSORLG00000022139.1 transcript:ENSORLT00000047058.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 161.77 bits (408), Expect = 2.498e-52 Identity = 67/93 (72.04%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWG 332 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G YRG+S+LQLERINVYY EA+GGKYVPRA+L DLEP TM+++R P+GQ+FRPDNF++G Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYRGDSELQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
BLAST of Tubulin beta chain vs. Ensembl Medaka
Match: tubb2 (tubulin beta-2B chain [Source:NCBI gene;Acc:101162245]) HSP 1 Score: 159.073 bits (401), Expect = 1.332e-51 Identity = 67/93 (72.04%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWG 332 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y+G+SDLQLERINVYY EA+G KYVPRAIL DLEP TM+++R P+GQLFRPDNF++ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYQGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDSVRSGPFGQLFRPDNFVFA 93
BLAST of Tubulin beta chain vs. Planmine SMEST
Match: SMESG000000234.1 (SMESG000000234.1) HSP 1 Score: 192.586 bits (488), Expect = 6.084e-61 Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 3 Query: 93 NQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 N + KFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT Sbjct: 22 NDIYYKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 115
BLAST of Tubulin beta chain vs. Planmine SMEST
Match: SMESG000000199.1 (SMESG000000199.1) HSP 1 Score: 192.2 bits (487), Expect = 1.316e-60 Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 3 Query: 93 NQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 N + KFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT Sbjct: 22 NDIYYKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 115
BLAST of Tubulin beta chain vs. Planmine SMEST
Match: SMESG000050810.1 (SMESG000050810.1) HSP 1 Score: 188.734 bits (478), Expect = 2.901e-59 Identity = 80/107 (74.77%), Postives = 95/107 (88.79%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G+KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRA+L DLEP TM+++R P+GQLFRPDNFI+G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Planmine SMEST
Match: SMESG000074579.1 (SMESG000074579.1) HSP 1 Score: 188.348 bits (477), Expect = 4.318e-59 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRAIL DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
BLAST of Tubulin beta chain vs. Planmine SMEST
Match: SMESG000074423.1 (SMESG000074423.1) HSP 1 Score: 188.348 bits (477), Expect = 4.318e-59 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 54 MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYYTEATGGKYVPRAILTDLEPSTMETIRGSPYGQLFRPDNFIWGARGSSNNWAKGHYT 374 MREIV++Q GQCGNQ+G KFWE++SDEHG+DP G Y G+SDLQLERINVYY EATGGKYVPRAIL DLEP TM+++R P+GQLFRPDNF++G G+ NNWAKGHYT Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107 The following BLAST results are available for this feature:
BLAST of Tubulin beta chain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Tubulin beta chain vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Tubulin beta chain vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 4
BLAST of Tubulin beta chain vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Tubulin beta chain vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Tubulin beta chain vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30034805 ID=SMED30034805|Name=Tubulin beta chain|organism=Schmidtea mediterranea sexual|type=transcript|length=374bpback to top protein sequence of SMED30034805-orf-1 >SMED30034805-orf-1 ID=SMED30034805-orf-1|Name=SMED30034805-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=107bp MREIVYVQVGQCGNQMGTKFWEIMSDEHGLDPRGLYRGESDLQLERINVYback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|