SMED30034756
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30034756 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Alignments
SMED30034756 aligns in the following genomic locations:
Homology
BLAST of SMED30034756 vs. Ensembl Human
Match: MPHOSPH8 (M-phase phosphoprotein 8 [Source:HGNC Symbol;Acc:HGNC:29810]) HSP 1 Score: 53.9138 bits (128), Expect = 6.796e-7 Identity = 69/310 (22.26%), Postives = 138/310 (44.52%), Query Frame = 1 Query: 643 NINKYSLLPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS----FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 N +P N +L+D ++ GD ++ + S++ +L+ S+ L +LAA ++ L++ G +N + + TAL+ A E + + +L+ GA +N SN ++ L C++ +++++ GAD S+ ++ +L +AK + + + HL LS + I +L L + P++ I+ + + + D N K +N P LFI +G E+ +++V LND Q + + +F + NKL ++ K ++++ AY V Sbjct: 558 NFAATDAIPSN--VLRDAVKNGDYITVKVALNSNEEYNLDQEDSSGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSAL----HFAKQSNNVLVYDLLKNHLETLSRVAEETIKDYFEARLAL---LEPVFPIACHRLCEGPDFSTDFNYK-PPQNIPEGSGILLFIFHANFLGKEVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPSAKVKLLIGAYRV 857
BLAST of SMED30034756 vs. Ensembl Human
Match: KIDINS220 (kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]) HSP 1 Score: 51.9878 bits (123), Expect = 2.653e-6 Identity = 33/117 (28.21%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 700 EKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGA 1050 E+G+L++++ + + +LE+L N+ L I A+K + IV LL GVN+ +D TALM+AC +++LL+++GA+ + + + + + + +LL GA Sbjct: 47 EQGNLEIVKELIKNGANCNLEDL-DNWTAL-ISASKEGHVHIVEELLKCGVNLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGA 161
BLAST of SMED30034756 vs. Ensembl Human
Match: KIDINS220 (kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]) HSP 1 Score: 50.8322 bits (120), Expect = 5.879e-6 Identity = 33/117 (28.21%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 700 EKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGA 1050 E+G+L++++ + + +LE+L N+ L I A+K + IV LL GVN+ +D TALM+AC +++LL+++GA+ + + + + + + +LL GA Sbjct: 47 EQGNLEIVKELIKNGANCNLEDL-DNWTAL-ISASKEGHVHIVEELLKCGVNLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGA 161
BLAST of SMED30034756 vs. Ensembl Human
Match: KIDINS220 (kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]) HSP 1 Score: 50.8322 bits (120), Expect = 6.040e-6 Identity = 33/117 (28.21%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 700 EKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGA 1050 E+G+L++++ + + +LE+L N+ L I A+K + IV LL GVN+ +D TALM+AC +++LL+++GA+ + + + + + + +LL GA Sbjct: 47 EQGNLEIVKELIKNGANCNLEDL-DNWTAL-ISASKEGHVHIVEELLKCGVNLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGA 161
BLAST of SMED30034756 vs. Ensembl Xenopus
Match: MPHOSPH8 (M-phase phosphoprotein 8 [Source:NCBI gene;Acc:100145122]) HSP 1 Score: 51.6026 bits (122), Expect = 3.433e-6 Identity = 65/286 (22.73%), Postives = 122/286 (42.66%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS----FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRK 1521 LKD ++ GD ++ + S + +LE S+ L +LAA ++ L+ G IN++ + TAL+ A E + + LL+ GA +N ++ ++ L C++ +++LL G D S+ + ++L ++A + + + HL LS +++ I +L L + P+ E D L+F + TP LF+ G E+ +++V LND Q + I +F + NKL ++ + K Sbjct: 553 LKDAVKNGDYVTVKYALNSKEEYNLEQEDSSGMTLVMLAAAAGQDDVLRLLIKKGAKINARQKNGTTALIHAAEKNYLTTVALLLEAGAYVNVQQASGETALMKACKRGNSDIVRLLLEYGVDCNVLSKHQGNAL----QFAMQSNNVHLYEMIKSHLETLSRVVEDAIKDYFDTRLSLLEPVFPLACHRLCEGPD-FSLDFSYKAPF---TTPEGSGILLFVFHANYFGKEVVVRLCGPCSVQAVVLNDKFQLPVFLDAHFIYSFSPVAGLNKLFIRLTEVPAAK 830
BLAST of SMED30034756 vs. Ensembl Xenopus
Match: FANK1 (fibronectin type III and ankyrin repeat domains 1 [Source:NCBI gene;Acc:100495570]) HSP 1 Score: 49.2914 bits (116), Expect = 9.569e-6 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1 Query: 778 YPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGA 951 + L +AA + ++ I L++ G +N+KDT+ KT LM A N ESL+ LL+ NGA Sbjct: 246 WTPLMRIAAVSGNVDIARCLIAAGAGVNAKDTNGKTPLMVAVLNNHESLVHLLLENGA 303
BLAST of SMED30034756 vs. Ensembl Xenopus
Match: FANK1 (fibronectin type III and ankyrin repeat domains 1 [Source:NCBI gene;Acc:100495570]) HSP 1 Score: 49.2914 bits (116), Expect = 9.765e-6 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1 Query: 778 YPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGA 951 + L +AA + ++ I L++ G +N+KDT+ KT LM A N ESL+ LL+ NGA Sbjct: 242 WTPLMRIAAVSGNVDIARCLIAAGAGVNAKDTNGKTPLMVAVLNNHESLVHLLLENGA 299
BLAST of SMED30034756 vs. Ensembl Mouse
Match: Mphosph8 (M-phase phosphoprotein 8 [Source:MGI Symbol;Acc:MGI:1922589]) HSP 1 Score: 53.5286 bits (127), Expect = 5.305e-7 Identity = 67/303 (22.11%), Postives = 136/303 (44.88%), Query Frame = 1 Query: 664 LPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS----FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 +P NL L+D ++ GD ++ + S++ +L+ S L +LAA ++ L++ G +N + + TAL+ A E + + +L+ GA +N SN ++ L C++ +++++ GAD S+ ++ +L +AK + + + HL LS + I +L L + P++ I+ + + + D N + +N P LFI +G ++ +++V LND Q + + +F + NKL ++ K ++++ AY V Sbjct: 563 IPNNL--LRDAVKNGDYIAVKVALNSNEEYNLDQEDSTGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSALY----FAKQCNNVLVYELLKSHLETLSRVAEETIRDYFESRLAL---LEPVFPIACHRLCEGPDFSTDFNY-MPPQNMPEGSGVLLFIFHANFLGKDVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPFAKVKLLIGAYRV 855
BLAST of SMED30034756 vs. UniProt/SwissProt
Match: sp|G3V8T1|MPP8_RAT (M-phase phosphoprotein 8 OS=Rattus norvegicus OX=10116 GN=Mphosph8 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 3.010e-6 Identity = 67/303 (22.11%), Postives = 136/303 (44.88%), Query Frame = 1 Query: 664 LPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS----FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 +P NL L+D ++ GD ++ + S++ +L+ S L +LAA ++ L++ G +N + + TAL+ A E + + +L+ GA +N SN ++ L C++ +++++ GAD S+ ++ +L +AK + + + HL LS + I +L L + P++ I+ + + + D N + +N P LFI +G ++ +++V LND Q + + +F + NKL ++ K ++++ AY V Sbjct: 556 IPSNL--LRDAVKNGDYIAVKVALNSNEEYNLDQEDSTGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSALY----FAKQCNNVLVYELLKSHLETLSRVAEETIRDYFESRLAL---LEPVFPIACHRLCEGPDFSTDFNY-MPPQNMPEGSGVLLFIFHANFLGKDVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPFAKVKLLIGAYRV 848
BLAST of SMED30034756 vs. UniProt/SwissProt
Match: sp|Q99549|MPP8_HUMAN (M-phase phosphoprotein 8 OS=Homo sapiens OX=9606 GN=MPHOSPH8 PE=1 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 3.263e-6 Identity = 69/310 (22.26%), Postives = 138/310 (44.52%), Query Frame = 1 Query: 643 NINKYSLLPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS----FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 N +P N +L+D ++ GD ++ + S++ +L+ S+ L +LAA ++ L++ G +N + + TAL+ A E + + +L+ GA +N SN ++ L C++ +++++ GAD S+ ++ +L +AK + + + HL LS + I +L L + P++ I+ + + + D N K +N P LFI +G E+ +++V LND Q + + +F + NKL ++ K ++++ AY V Sbjct: 558 NFAATDAIPSN--VLRDAVKNGDYITVKVALNSNEEYNLDQEDSSGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSAL----HFAKQSNNVLVYDLLKNHLETLSRVAEETIKDYFEARLAL---LEPVFPIACHRLCEGPDFSTDFNYK-PPQNIPEGSGILLFIFHANFLGKEVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPSAKVKLLIGAYRV 857
BLAST of SMED30034756 vs. UniProt/SwissProt
Match: sp|Q3TYA6|MPP8_MOUSE (M-phase phosphoprotein 8 OS=Mus musculus OX=10090 GN=Mphosph8 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 3.711e-6 Identity = 67/303 (22.11%), Postives = 136/303 (44.88%), Query Frame = 1 Query: 664 LPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS----FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 +P NL L+D ++ GD ++ + S++ +L+ S L +LAA ++ L++ G +N + + TAL+ A E + + +L+ GA +N SN ++ L C++ +++++ GAD S+ ++ +L +AK + + + HL LS + I +L L + P++ I+ + + + D N + +N P LFI +G ++ +++V LND Q + + +F + NKL ++ K ++++ AY V Sbjct: 563 IPNNL--LRDAVKNGDYIAVKVALNSNEEYNLDQEDSTGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSALY----FAKQCNNVLVYELLKSHLETLSRVAEETIRDYFESRLAL---LEPVFPIACHRLCEGPDFSTDFNY-MPPQNMPEGSGVLLFIFHANFLGKDVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPFAKVKLLIGAYRV 855
BLAST of SMED30034756 vs. TrEMBL
Match: K1PS99 (M-phase phosphoprotein 8 OS=Crassostrea gigas OX=29159 GN=CGI_10008812 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.723e-11 Identity = 72/296 (24.32%), Postives = 138/296 (46.62%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS---FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLK-KQNKLSVKFENIKCRKTRIILAAYYVTTI 1560 + + +GD ++ + S +R +E + L + AA++ I L+S G +IN++ + T+LM ACE+ + LLV GA +N ++ L ++ + ++ LL GA+FS +++S S YAK ++LT+I+ I + +++L+ + + L ++ + P+ V P + +NF ++ NTP LFI I ++ KC F + S LN V Q LT+ + + L+ +N++ + K ++++ AY I Sbjct: 466 FQQAVTEGDYQAVRRALSSSKRYDVEAVDDLGITLLMYAAQSGFDDIAELLVSNGADINAQQKNGTTSLMLACEHAYICTVALLVELGAKINVQQDTGETALMKAVKRGHKQIVKFLLEYGANFS-AQNNSGFSALTYAKMLRLTEIEDIITEFITRLTKEFDKQVAVTLNNTAQISSSLFPMQVF-PLCESSKFVINF---KHEMQPNTPGVGYLLFIAHARITATDCKCRFYGPCAVNSATLNGVPQPPLTEEANFVLSCCPLQNGRNEIVINTVKASTSKAKLVICAYKAQLI 756
BLAST of SMED30034756 vs. TrEMBL
Match: A0A210QD81 (M-phase phosphoprotein 8 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT07684 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.026e-11 Identity = 71/298 (23.83%), Postives = 146/298 (48.99%), Query Frame = 1 Query: 679 EILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPS---FLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKK-QNKLSVKFENIKCRKTRIILAAYYVTTI 1560 E + + +GD L++ + S ++ +E++ L + +A+N + I L++ NIN++ + T+LM ACE+ + LLV GA++N + ++ L + + ++ LL GA+FS +++S + YAK M+LT+I+ I ++S+L+ + + L ++ + P+ P ++ +NF L+ NTP LF+ I +++C F +++V+LN V+Q LT+ + + L+ +N++ + K ++++ AY I Sbjct: 527 ENFRQAVMEGDYLLVKKALGSKKKFDVESVDDLGITLLMYSAQNGNDDIAELLVNHKANINAQQHNGTTSLMLACEHAHICTVALLVELGANVNLQQTTGETALMKAVRRGHKQIVKFLLEHGANFS-AQNNSGFTAVTYAKMMRLTEIEDIIVDYISRLTNEFDKQVAITLNSTAKIISALFPLQCF-PLSEGEKFSVNFKHE---LQANTPGVGYLLFVAHARITAQDIRCRFYGPCAVQNVSLNGVQQPPLTEEANFVLSCCPLQHGRNEVIINTVPAPGSKAKLVVCAYKAQLI 819
BLAST of SMED30034756 vs. TrEMBL
Match: A0A1S3HJH8 (ankyrin repeat and KH domain-containing protein mask isoform X1 OS=Lingula unguis OX=7574 GN=LOC106155815 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.793e-11 Identity = 76/292 (26.03%), Postives = 136/292 (46.58%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKN--DDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDE--IHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLK-KQNKLSVKFENIKCRKTRIILAAY 1545 LK +++G + ++ + S ++ +LE L +LAA DDL V L+ G N+N+K T LMFA EN + +L+ GA +N N + ++ L +K + +++LL GADFS + +L +YAK + ++Q +H+ KL+ + L + + P++V+ P D+ IH N ++ + LF+ I E KC S +K+ LN V Q +LT + + +F L +N+L + + ++++ AY Sbjct: 521 LKHAVKEGMYERVRKALNSQKQYNLEQPDQMGMTLVMLAAAKGFDDL--VELLVINGANMNAKAKTGNTPLMFAAENGHLCTVAVLLALGAHINIQNGSQETALIKATKKGHNQIVKMLLENGADFSAENATGNTAL-KYAKLLNSVELQATINQHVKKLTALFTQQVYLTMNNTAETVCSLFPLHVL-PLNEGDKFVIHFNHELQPTVPGVGM--LLFVAHARITPQETKCRLSGPCAVKTAILNGVAQPTLTDEGQFVLSFSPLHNGRNELIIHTVYAPTSRAKLVVGAY 806
BLAST of SMED30034756 vs. TrEMBL
Match: A0A1S3HMJ6 (ankyrin repeat and KH domain-containing protein mask isoform X2 OS=Lingula unguis OX=7574 GN=LOC106155815 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.136e-11 Identity = 76/292 (26.03%), Postives = 136/292 (46.58%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKN--DDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDE--IHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLK-KQNKLSVKFENIKCRKTRIILAAY 1545 LK +++G + ++ + S ++ +LE L +LAA DDL V L+ G N+N+K T LMFA EN + +L+ GA +N N + ++ L +K + +++LL GADFS + +L +YAK + ++Q +H+ KL+ + L + + P++V+ P D+ IH N ++ + LF+ I E KC S +K+ LN V Q +LT + + +F L +N+L + + ++++ AY Sbjct: 520 LKHAVKEGMYERVRKALNSQKQYNLEQPDQMGMTLVMLAAAKGFDDL--VELLVINGANMNAKAKTGNTPLMFAAENGHLCTVAVLLALGAHINIQNGSQETALIKATKKGHNQIVKMLLENGADFSAENATGNTAL-KYAKLLNSVELQATINQHVKKLTALFTQQVYLTMNNTAETVCSLFPLHVL-PLNEGDKFVIHFNHELQPTVPGVGM--LLFVAHARITPQETKCRLSGPCAVKTAILNGVAQPTLTDEGQFVLSFSPLHNGRNELIIHTVYAPTSRAKLVVGAY 805
BLAST of SMED30034756 vs. TrEMBL
Match: A0A1S3HMK1 (M-phase phosphoprotein 8 isoform X7 OS=Lingula unguis OX=7574 GN=LOC106155815 PE=4 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.586e-11 Identity = 76/292 (26.03%), Postives = 136/292 (46.58%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKN--DDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDE--IHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLK-KQNKLSVKFENIKCRKTRIILAAY 1545 LK +++G + ++ + S ++ +LE L +LAA DDL V L+ G N+N+K T LMFA EN + +L+ GA +N N + ++ L +K + +++LL GADFS + +L +YAK + ++Q +H+ KL+ + L + + P++V+ P D+ IH N ++ + LF+ I E KC S +K+ LN V Q +LT + + +F L +N+L + + ++++ AY Sbjct: 421 LKHAVKEGMYERVRKALNSQKQYNLEQPDQMGMTLVMLAAAKGFDDL--VELLVINGANMNAKAKTGNTPLMFAAENGHLCTVAVLLALGAHINIQNGSQETALIKATKKGHNQIVKMLLENGADFSAENATGNTAL-KYAKLLNSVELQATINQHVKKLTALFTQQVYLTMNNTAETVCSLFPLHVL-PLNEGDKFVIHFNHELQPTV--PGVGMLLFVAHARITPQETKCRLSGPCAVKTAILNGVAQPTLTDEGQFVLSFSPLHNGRNELIIHTVYAPTSRAKLVVGAY 706
BLAST of SMED30034756 vs. Ensembl Cavefish
Match: ENSAMXT00000034627.1 (pep primary_assembly:Astyanax_mexicanus-2.0:19:21583758:21586293:1 gene:ENSAMXG00000034330.1 transcript:ENSAMXT00000034627.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 49.2914 bits (116), Expect = 3.860e-6 Identity = 60/259 (23.17%), Postives = 109/259 (42.08%), Query Frame = 1 Query: 787 LFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD---FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKD-EIHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 L +LAA I+ L+ GV +N + + TALM A E + + +L+ G+ LN ++ L C++ +++LL GAD S+ K+ +L + + N+ + D+ + H+ LS + I +L L + P+ E D + N+ + + LFI + SE+ + +V LND Q + I +F + NKL ++ K ++++ AY V Sbjct: 3 LSMLAAAGGQDDILRLLIKKGVKVNGRQKNGTTALMHAAEKNFLTTVAILLEAGSCLNAQTIGGETALMRACKRGNADVVRLLLEYGADCNILSKHKNTALY-FAKLSNNLVVNDLIK---DHIQTLSTVAEETIRAYFESRLALLESVFPLACHRLCEGPDFSLEFNYKPPPHPPGEGSGILLFIFHANFM-SEITARLCGPCSVHAVILNDKFQLPIFLDSHFIYSFSPVPGANKLFIRLAESPTAKVKLLICAYKV 256
BLAST of SMED30034756 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006173.1 (pep scaffold:Pmarinus_7.0:GL476888:203576:225198:1 gene:ENSPMAG00000005569.1 transcript:ENSPMAT00000006173.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.447 bits (119), Expect = 4.047e-7 Identity = 62/295 (21.02%), Postives = 134/295 (45.42%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIM-PIYVISPFEIKD---EIHLNFDINSKLLKKNTPSFLFILTGIIIGSE-MKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYVT 1554 L++ + GD+ ++ + + Q +++ L +LAA L I+ L+ G N+N++ + TAL++A E S + LL+ NGA +N +N ++ L C++ + +++LL+ AD S + L+ + + KL Q I+E + + + L ++ DV+++ P++ ++ + + ++ + + LF++ G E + C + +++V LN Q L + +F + N L V+F K +++ A+ V+ Sbjct: 2 LREAVRTGDMHTVRAAL-TTQPHQVDHEDGTGMTLVMLAAAFGHLDILRLLIRSGANVNARQKNGSTALIYAAEKNHLSTLALLLENGARVNLQQNNGETALSKACKRGDVEMVRLLLDNFADCSAM----LVQQSATQAHQKLYTNQIISEMIANNRQL-LSGAALDKIQEYFEEDVKLLDPLFPMTCHRVDGCECSVQFEYEPADDPPAGCSSTLLFLVHSSTQGCERIACRLTGACAVQAVVLNQHYQLPLFLKNNFVFSFNPVPGMNSLLVRFSTSPALKVNVMVCAHAVS 290
BLAST of SMED30034756 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006175.1 (pep scaffold:Pmarinus_7.0:GL476888:203579:225198:1 gene:ENSPMAG00000005569.1 transcript:ENSPMAT00000006175.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.0618 bits (118), Expect = 4.748e-7 Identity = 64/294 (21.77%), Postives = 136/294 (46.26%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIM-PIYVISPFEIKD-EIHLNFDIN-SKLLKKNTPSFLFILTGIIIGSE-MKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYVT 1554 L++ + GD+ ++ + + Q +++ L +LAA L I+ L+ G N+N++ + TAL++A E S + LL+ NGA +N +N ++ L C++ + +++LL+ AD S + L+ + + KL Q I+E + + + L ++ DV+++ P++ ++ + E + F+ + + + LF++ G E + C + +++V LN Q L + +F + N L V+F K +++ A+ V+ Sbjct: 1 LREAVRTGDMHTVRAAL-TTQPHQVDHEDGTGMTLVMLAAAFGHLDILRLLIRSGANVNARQKNGSTALIYAAEKNHLSTLALLLENGARVNLQQNNGETALSKACKRGDVEMVRLLLDNFADCSAM----LVQQSATQAHQKLYTNQIISEMIANNRQL-LSGAALDKIQEYFEEDVKLLDPLFPMTCHRVDGCECSVQFEYEPADDPPAGSSTLLFLVHSSTQGCERIACRLTGACAVQAVVLNQHYQLPLFLKNNFVFSFNPVPGMNSLLVRFSTSPALKVNVMVCAHAVS 288
BLAST of SMED30034756 vs. Ensembl Medaka
Match: ENSORLT00000016144.3 (M-phase phosphoprotein 8 [Source:NCBI gene;Acc:101156779]) HSP 1 Score: 53.5286 bits (127), Expect = 4.613e-7 Identity = 67/297 (22.56%), Postives = 128/297 (43.10%), Query Frame = 1 Query: 667 PLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGAD--FSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYV 1551 PL+ L+D ++ GD ++ + S + +LE + L +LAA I+ L+ GV +N++ + TALM A E + + +L+ G+ +N ++ L C++ +++LL GAD ++ L + + N+ + D + ++H++ LS + I +L L + PI E D L F ++ +++ LFI + C + +V LND Q + I +F + NKL ++ K ++++ AY V Sbjct: 488 PLSPSELRDAVKSGDYMAVKLALNSKEDYNLEQEDVSGMSLCMLAAAGGQDDILRLLIKKGVRVNARQKNGTTALMHAAEKNFLTTVAILLEAGSYVNAQTLGGETALMKACKRGNTDIVRLLLEYGADCNIQSKHKNTALYFAKVSNNLVVFD---LVKEHINVLSSVAEETIRGYFESRLVLLEPVFPIACHRLCEGPD-FSLEFGFKAQPQPESSGILLFIFHANFLNEITARLCGPC-SVHAVVLNDKFQLPIFLDSHFIYSFSPVPGINKLFIRLAEAPTAKVKLLICAYRV 779
BLAST of SMED30034756 vs. Ensembl Medaka
Match: ankdd1b (ankyrin repeat and death domain containing 1B [Source:NCBI gene;Acc:101164158]) HSP 1 Score: 49.2914 bits (116), Expect = 9.360e-6 Identity = 28/88 (31.82%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNG 948 L + E+G+ L+Q + ++N P LA +N +P++ SLL+ G NIN D S+TA+ FA E L+++L+ G Sbjct: 325 LHPVSERGEASLVQLLLQYKTDADVQNQHLEAP--LHLAVRNSRIPVIHSLLAAGCNINLTDKRSQTAMHFAAELAQTELVEMLLKAG 410
BLAST of SMED30034756 vs. Ensembl Medaka
Match: ankdd1b (ankyrin repeat and death domain containing 1B [Source:NCBI gene;Acc:101164158]) HSP 1 Score: 48.9062 bits (115), Expect = 9.661e-6 Identity = 28/88 (31.82%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 685 LKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNG 948 L + E+G+ L+Q + ++N P LA +N +P++ SLL+ G NIN D S+TA+ FA E L+++L+ G Sbjct: 299 LHPVSERGEASLVQLLLQYKTDADVQNQHLEAP--LHLAVRNSRIPVIHSLLAAGCNINLTDKRSQTAMHFAAELAQTELVEMLLKAG 384
BLAST of SMED30034756 vs. Planmine SMEST
Match: SMESG000043111.1 (SMESG000043111.1) HSP 1 Score: 1005.36 bits (2598), Expect = 0.000e+0 Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 1 Query: 16 MTQILNGRGESYIEKIISHRISANKSNYYEYHVKMSNTDSAIWLSEMEIIKLNTNLLKCYKKKAGLIALSGNDDENFHLVDFSKFIALNFNECMGIKLEIGVVCDEATMETSESIEQVTTAVKIKTENVEYVENESADNCNKMICNNSLKEDLITTRELNSSCLRNEPVIPEQNERNGDISQVPSNSFDLIDRFFDHLPIVSKVTNDLRNINKYSLLPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYVTTI 1560 MTQILNGRGESYIEKIISHRISANKSNYYEYHVKMSNTDSAIWLSEMEIIKLNTNLLKCYKKKAGLIALSGNDDENFHLVDFSKFIALNFNECMGIKLEIGVVCDEATMETSESIEQVTTAVKIKTENVEYVENESADNCNKMICNNSLKEDLITTRELNSSCLRNEPVIPEQNERNGDISQVPSNSFDLIDRFFDHLPIVSKVTNDLRNINKYSLLPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGASLNNINSNNDSILFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYVTTI Sbjct: 1 MTQILNGRGESYIEKIISHRISANKSNYYEYHVKMSNTDSAIWLSEMEIIKLNTNLLKCYKKKAGLIALSGNDDENFHLVDFSKFIALNFNECMGIKLEIGVVCDEATMETSESIEQVTTAVKIKTENVEYVENESADNCNKMICNNSLKEDLITTRELNSSCLRNEPVIPEQNERNGDISQVPSNSFDLIDRFFDHLPIVSKVTNDLRNINKYSLLPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGASLNNINSNNDSILFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFISLKKQNKLSVKFENIKCRKTRIILAAYYVTTI 515
BLAST of SMED30034756 vs. Planmine SMEST
Match: SMESG000043115.1 (SMESG000043115.1) HSP 1 Score: 232.261 bits (591), Expect = 9.437e-69 Identity = 142/338 (42.01%), Postives = 217/338 (64.20%), Query Frame = 1 Query: 556 SQVPSNSFDLIDRFFDHLPIVSKVTNDLRNINKYSLLPLNLEILKDIIEKGDLDLLQNYMYSDQRESLENLISNYPCLFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDE-IHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQS-FKTITTFISLKKQNK-LSVKFENIKCRKTRIILAAYYVTTI 1560 ++ N+ D +D F HLPI +K+ D+ ++ L P+ ++IL II KG+ +LLQ+Y+ S ++ L L+ + P LF+LAA+ + + IV LL+LG +IN D S ALM ACENE++ LID LV NGA++N I+++++ L +CC KNK ++ LLNLGA+F++I + SL Y + M+L +I +I +KH++ LS +IK IL LG K+++ +IMPI VIS FEI+++ + L FD + +K N + L ++TGI++GS MK SD +I SV LN VEQ SL + +T+F LK +N L + +E CRK R++LAA+ V I Sbjct: 277 NEAEGNNLDTVDELFMHLPITTKILIDVDKSSEIELNPITMDILISIINKGNTELLQSYINSCHKQLLGQLVQSKPWLFVLAAQCNHVHIVGLLLALGADINGFDDHSFNALMRACENENQLLIDFLVNNGAAMNLISNDSNIALLYCCLKNKVQSFNTLLNLGANFNKILIEPPCSLERYVRQMELKEIGQILDKHITNLSKNIKENILSLLGPKIKILNQIMPINVISLFEIQNKSVSLTFDADIPPVKPNHCNILSLVTGIVVGSGMKLLLSDSNKICSVILNGVEQQSLIPGNYNVMTSFSPLKGENNTLVLNYEKNSCRKIRLLLAAFNVIMI 614 HSP 2 Score: 67.0106 bits (162), Expect = 1.739e-11 Identity = 56/159 (35.22%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 43 ESYIEKIISHRISANKSNYYEYHVKMSNTDSAIWLSEMEIIKLNTNLLKCYKK------KAGLIALSGNDDENFHLVDFSKFIALNFNECMGIKLEIGVVCDEATMETSESIEQVTTAV-------KIKTENVEYVENESADNCNKMICNNSLKEDLIT 480 E ++ I+SHRI +E++V ++N+ S +W+SE + K + ++L+ YKK + G +LS D +++ SKFIALNFNE GIKLEIGV + E I + IKTE+VE+ NE D C+ N+ +ED I+ Sbjct: 3 ELSVDCILSHRID---EGIHEFYVSVNNSQSMLWISESYLQKYHFDILETYKKCHNINDELGKKSLSNEVD----VINHSKFIALNFNEEFGIKLEIGVRETPLENDILECIPSPGASTYLMNPIQDIKTESVEFDSNE--DFCSIEYTNSLKQEDYIS 152
BLAST of SMED30034756 vs. Planmine SMEST
Match: SMESG000045245.1 (SMESG000045245.1) HSP 1 Score: 67.3958 bits (163), Expect = 1.290e-11 Identity = 64/258 (24.81%), Postives = 127/258 (49.22%), Query Frame = 1 Query: 787 LFILAAKNDDLPIVSSLLSLGVNINSKDTDSKTALMFACENESESLIDLLVTNGAXXXXXXXXXXXXXFFCCEKNKPKAIQILLNLGADFSRIKSDSLLSLNEYAKNMKLTDIQRIAEKHLSKLSISIKNVILLQLGGKLRLDVRIMPIYVISPFEIKDEIHLNFDINSKLLKKNTPSFLFILTGIIIGSEMKCFFSDCYQIKSVALNDVEQGSLTQSFKTITTFIS--LKKQNKLSVKFENIK-CRKTRIILAAYYV 1551 L +LA++ I+ ++ GV++N ++ + T LM ACE E + LL+ NGA +N +N ++S L + + + + ILL G D ++++ S + A+ L +++ + ++ LS + + +G + + I P+ ++S +E + E L F+ +K++ + L I TG++ +++ I SV LN++ Q SL + +S L +N L++KF + CR R + + V Sbjct: 359 LLVLASRLGYSDIIGMIIRAGVDVNYQNEEGITPLMTACEYGHEIVCQLLINNGAHINFVNKKSESALLKVVTRGQKECLSILLQNGCDVFNLENEK--SPLQIARQRNLHEMEVMITEYHKNLSEKLSAKFIGLMGSMVSVSYIIFPLRILSLYE-ESEFVLEFETKFPPVKEDECNILIIFTGLVQEKQIQFCLEQIVPIVSVTLNEISQQSLVPENQNYLMSMSPILDGKNLLTIKFGSTADCRWIRSLAVGFRV 613 The following BLAST results are available for this feature:
BLAST of SMED30034756 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 4
BLAST of SMED30034756 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30034756 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30034756 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30034756 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of SMED30034756 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of SMED30034756 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 3
BLAST of SMED30034756 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30034756 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of SMED30034756 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of SMED30034756 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30034756 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30034756 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of SMED30034756 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30034756 ID=SMED30034756|Name=SMED30034756|organism=Schmidtea mediterranea sexual|type=transcript|length=1567bpback to top protein sequence of SMED30034756-orf-1 >SMED30034756-orf-1 ID=SMED30034756-orf-1|Name=SMED30034756-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=516bp MTQILNGRGESYIEKIISHRISANKSNYYEYHVKMSNTDSAIWLSEMEIIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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