Protocadherin-1
|
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30034737 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Homology
BLAST of Protocadherin-1 vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 231.876 bits (590), Expect = 1.236e-61 Identity = 213/787 (27.06%), Postives = 360/787 (45.74%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQQK--------DNDCSHIVIISFGS-FIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
++ E +P ++ + +L A F + H + + G LR ++ TG + +S+DRE L CQ + + + S ++ GS + E + D+ND P FA I L+I E+ IG + +P+ASD D+ G+ASY+++ ++ F +D E K QPQL V+ +DRE + Y T+ D + +L + D NDN+P++ Y+ + E + +KA D+D N+++++ A R+L R+ + + + ++ ++ V K + +++KD NDNAP I I A I E+ + ++ V D D N +C + L++ +K + Y ++T D EKV Y++ I+ +D G+P L+S+ V V+D NDN+P+FT+S+ E EN+ I ++A D DS NA++ YSL + F+I+ G I K DREQ+ Y V+A+D G PS TA++LV VLD ND P F Y F+++E NM + +G++ D D EN V + + F +Q NG ++ + DRE+QST + A D G PP S + VT+ + D ND+ P T PS+ S ++ + G ++++ AED D +N +++ + G I G + L++ I+ R H + R++V+ SD+
Sbjct: 63 KVPEEQPPNTLIGSLAADY--GFPDVGHLYKLEVGAPYLR----VDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQ--------AGPEAQELFGLQVAEDQEEK--QPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSD--QGANAEIEYTFHQAPE-VVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKK---------YFLQTT--TPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVME---NMPALSPVGMVTVIDGDKGENAQVQLSV-----------EQDNGDFVIQ---NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKL--LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGL---HRLVVKVSDR 797 HSP 2 Score: 162.54 bits (410), Expect = 9.580e-40 Identity = 159/602 (26.41%), Postives = 255/602 (42.36%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPYK----ITVKECTTSREIFSL-KAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG----LIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++D ND P F + E + E+ PIGH + A+D D A+ +IE F + R + + + + V +DRE F+++A D T K +V+ +KD+NDN+P + IGL + E +L + D D+ N + + F++ A + G+ K L ++ L + + VD G L +T L + + D NDNAP+ + + EN + E++ +T D D N E L E ++ L T + P+ G + Q++T S DRE+ + Y + ++ D+GSP L + V VLD NDN P F S Y F +MEN S +G V+ D D ENA+++ S+++ + N G I + FDREQ+S Y F + A D G P RS+ + + VLD+ND P S+ + LG + A D D N + Y I +PY F++ + +G ++L I+R + V D GKPP + V + +N+
Sbjct: 266 LRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQG----ANAEIEYTFHQAPEVVRRLLRLDRNTGL-----------ITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--------PLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLE-------PEPAAKGLFTIS--PETGEI---QVKT----SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN----TSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPY---------GLFQIG-SHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNE 814
BLAST of Protocadherin-1 vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 231.876 bits (590), Expect = 2.221e-61 Identity = 214/787 (27.19%), Postives = 361/787 (45.87%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQQK--DNDC------SHIVIISFGS-FIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKECTT-SREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
++ E +P ++ + +L A F + H + + G LR ++ TG + +S+DRE L CQ + + C S ++ GS + E + D+ND P FA I L+I E+ IG + +P+ASD D+ G+ASY+++ ++ F +D E K QPQL V+ +DRE + Y T+ D + +L + D NDN+P++ Y+ + E + + +KA D+D N+++++ A R+L R+ + + + ++ ++ V K + +++KD NDNAP I I A I E+ + ++ V D D N +C + L++ +K + Y ++T D EKV Y++ I+ +D G+P L+S+ V V+D NDN+P+FT+S+ E EN+ I ++A D DS NA++ YSL + F+I+ G I K DREQ+ Y V+A+D G PS TA++LV VLD ND P F Y F+++E NM + +G++ D D EN V + + F +Q NG ++ + DRE+QST + A D G PP S + VT+ + D ND+ P T PS+ S ++ + G ++++ AED D +N +++ + G I G + L++ I+ R H + R++V+ SD+
Sbjct: 63 KVPEEQPPNTLIGSLAADY--GFPDVGHLYKLEVGAPYLR----VDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQ--------AGPEAQELFGLQVAEDQEEK--QPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSD--QGANAEIEYTFHQAPE-VVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKK---------YFLQTT--TPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVME---NMPALSPVGMVTVIDGDKGENAQVQLSV-----------EQDNGDFVIQ---NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKL--LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGL---HRLVVKVSDR 797 HSP 2 Score: 162.54 bits (410), Expect = 1.265e-39 Identity = 159/602 (26.41%), Postives = 255/602 (42.36%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPYK----ITVKECTTSREIFSL-KAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG----LIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++D ND P F + E + E+ PIGH + A+D D A+ +IE F + R + + + + V +DRE F+++A D T K +V+ +KD+NDN+P + IGL + E +L + D D+ N + + F++ A + G+ K L ++ L + + VD G L +T L + + D NDNAP+ + + EN + E++ +T D D N E L E ++ L T + P+ G + Q++T S DRE+ + Y + ++ D+GSP L + V VLD NDN P F S Y F +MEN S +G V+ D D ENA+++ S+++ + N G I + FDREQ+S Y F + A D G P RS+ + + VLD+ND P S+ + LG + A D D N + Y I +PY F++ + +G ++L I+R + V D GKPP + V + +N+
Sbjct: 266 LRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQG----ANAEIEYTFHQAPEVVRRLLRLDRNTGL-----------ITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--------PLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLE-------PEPAAKGLFTIS--PETGEI---QVKT----SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN----TSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPY---------GLFQIG-SHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNE 814
BLAST of Protocadherin-1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 213.001 bits (541), Expect = 2.735e-55 Identity = 222/799 (27.78%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
C+ FH +K+ ++ E E+ EN I L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NAKI Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P S + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 15 ACVVFHSGAQ--EKNYTIRE-EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQ---------------FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS-NCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 755
BLAST of Protocadherin-1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 213.001 bits (541), Expect = 2.850e-55 Identity = 222/799 (27.78%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
C+ FH +K+ ++ E E+ EN I L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NAKI Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P S + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 15 ACVVFHSGAQ--EKNYTIRE-EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQ---------------FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS-NCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 755
BLAST of Protocadherin-1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 211.846 bits (538), Expect = 3.137e-55 Identity = 222/798 (27.82%), Postives = 360/798 (45.11%), Query Frame = 1
Query: 259 CLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
C+ FH +K+ ++ E E+ EN I L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NAKI Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P S + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 16 CVVFHSGAQ--EKNYTIRE-EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQ---------------FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS-NCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 755
BLAST of Protocadherin-1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 152.525 bits (384), Expect = 8.665e-37 Identity = 169/622 (27.17%), Postives = 274/622 (44.05%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY------GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI-GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLA 2403
LT +ID+ND PT + +++ E+V IG + A D DS GI Y +E +E F I D + +I K K +DRET +YS + A D T I + +KDINDN+P + Y +T+ +E +I +LKA D D+ + K+ ++I+ A + S + ++ + G LK + K+ V + D GGLQ + + I D N +AP + S KI E+ + L +D D N ++ + + + P G + + + DRE +SV++ D SP L +S Q VI+ D NDNSP FT S Y I E+ VG+S + VSA D D N + Y L+E + SI ++ G + K DREQ ++ + A D G PS S+ + I + + D ND P F + Y+ I E N V + +G I A D D +N + + I G + + + + + V+I + D E ++ + + G+ LS+++ V + ++D+ND+KP F N+ + G++ A
Sbjct: 465 LTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG--------SEDF--------IIDEDSGLI----KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE----DQKITYRIEEA---DREVFSILDIGDQGAILSVSGELK-RQDHKVRVEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRID-------------PSSGDISV-------SSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDYFLNE-SSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAE---NSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEF------DYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPA 1024 HSP 2 Score: 149.058 bits (375), Expect = 9.236e-36 Identity = 183/742 (24.66%), Postives = 308/742 (41.51%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI-ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMK---LVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGL----IEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIE 2496
EL E+ PI + + ++KA A + + ++ + R +NL L+ ++G + L S+DRE L + ++ + S + ++D+ D P F K I ED PIG + A DLDS + G Y + E K+ L + ++ +DRET ++A D T + + + + D+NDN+P + Y +T+ E T I ++KA D D N K+ S S + + + E L+ + K + ++ DG L +T LTI++ D ND+AP + + ++EN E + + DED N + + + E G++ K DRE YS+ + D G+P L +S +V++ D NDN+P F K Y I E S+I ++ A D D E+ KI Y ++E FSI G I + + Q + A+D G ++ + D + P F + F++ + H+ +G ++A D D +N + Y I ++ + +P +G +S+ +DRE+++T + V A DH PPL+ S + V L+D+ND+ P FT S A+ IS + G ++ A D D NG V + L NES S +I+
Sbjct: 173 ELPEDTPIETIIASVKAS--HASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNL------------------LAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTN-----------GKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDE-------------DSGLI-------KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFI---DDVNSAPYF-NDHPFSV-----KIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDP-------------SSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAA----TISEDIPVGTSFLQVSAIDADIGPNGIVDYFL--NESSSSPSIQ 833 HSP 3 Score: 142.124 bits (357), Expect = 1.178e-33 Identity = 110/350 (31.43%), Postives = 172/350 (49.14%), Query Frame = 1
Query: 1537 KSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEI-GNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVR 2577
KS DRE +D + + + ++ P +++S V VLD DNSPIF K Y EI E++ + + SV A D DS EN +I+YSL E G +IN GVI T DRE SL VIASD G P R STA + + V+D ND P+F Y I+E N+ + + ++A DED NG V Y + ++S + + G+++L ID + S I + A+D +P LS+++ +T+ + D+NDH P A+ + + G + ++ A D+D NG + + + G+E I++D +I + R S ++ R
Sbjct: 226 KSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILE---NITIPAVIATVKATDEDFGTNGKVHYSMASSS---------GIGGLTIDYS-TGEVTLRERID-AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLI----AAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDF---IIDEDSGLIKTTKLLDRETTARYSLKVTAR 554 HSP 4 Score: 135.191 bits (339), Expect = 1.867e-31 Identity = 115/453 (25.39%), Postives = 197/453 (43.49%), Query Frame = 1
Query: 1243 LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE---IGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVI-LKESIKSRSHRITQSDRILVRASDQ 2589
+ +T + + + D DN+P+ S +I+E+ + + +D D N E L + +L + ++S + P DRE + + +I DKG+P+ S+ + V+D NDN+P+F Y I+EN + I +V A D+D N K+ YS+ IG + + G + +E+ D + S + A D +P+ SST + + V+D ND P + +E N+A+ +G + A DED NG++ Y + + ++ + D+ K K+ +DRE + + V ARD G P L+ S T+ V L D+ND+ P F V IS E G + L A D D + E E S + I G ++ + +K + H++ R+ + A+DQ
Sbjct: 250 ISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAP-----------------LDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYST-GEVTLRERID-AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEE--NVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKL-------------LDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTF----DKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKV----RVEISATDQ 660 HSP 5 Score: 133.265 bits (334), Expect = 7.297e-31 Identity = 176/748 (23.53%), Postives = 316/748 (42.25%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLI----IDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKR----GHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLDFKIDT-AKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKEN-KRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDG 2505
E++E+ PI + ++++ A+ + + + + + GN + NL+ +N +G + + +DRE L + + ++ G+ E T ++ +D+ND P FA ++ILE++ I VI A+D D G Y + + S I L + ++ + ++ID + T V +G + V + +N+ DIND++P I IT++E E+ + A D D N + DF ID + L + KL + A L V + + L +T + + +KD NDNAP + I E R +I+T+ V +++ D + E R + + + +G ++ E R V I D+G Q + + +D+ +++P F + +I E+S + ++ A D D +NA+I YS+D + +F I+ G I DRE ++ ++ V ASD+ P +++ I V + D ND P F Y I E ++ V + + A D D+ NG+V Y + +S + + F++ T +G L + +DRE+ + I + + ARD G P LS + +T+TL+D+ND+ P F S + I+ G + + A D D N + F + G IE+D
Sbjct: 278 EIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGK--NLLAINAKSGVIQTAAPLDRETLSLIRLD----VIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASS-----------------SGIGGLTIDYSTGEVTLRERIDAKNS---PITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDR---------------ETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE------------DQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVR-------VEISATDQGGLQ---GRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS--SQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISE---DIPVGTSFLQVSAIDADIGPNGIVDYFLNESS------SSPSIQLFRLDRT-SGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYD----LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDA 946 HSP 6 Score: 107.842 bits (268), Expect = 4.034e-23 Identity = 151/625 (24.16%), Postives = 261/625 (41.76%), Query Frame = 1
Query: 616 FAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDF----YSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGK-LSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
F +++ + ED PI +I AS SQ Y+ R ++ F ++ ++++ K +DRE +K+ + A + +V+++ D+ DNSP + Y ++E + S+ A D D N ++++ + GN + L I S + ++ ++L V ++T + I++ D NDNAP+ + S + I EN ++ + DED N + +H S + G+ I Y T E RE++D + +I D P L+S+ ++ V+D ND++P + + EN E+G V A D+DS N IKYS++ G+ F I+ G+I T + DRE + Y+ V A D G PS +++ +I V + D ND P F +K+Y I E M + + ++A D D D+ + Y I +A++ + I G LS+ G + R++ + +++ A D G L V V ++D+N P S V I GY + L AED D N +V+ +
Sbjct: 165 FQQEKYVKELPEDTPIETIIASVKASHASSQPL---------YYSMVAPQDSRSQNLFTLDTMSG--------EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGEN--GEIEYSLGE---GNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGK----------VHYSMASSSGIG--------GLTIDYS--TGEVTL--RERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME--GSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISE---EMPRGSQIITLKAVDNDEDQK--ITYRI---------EEADREVFSILDIGDQGAILSVSGELKRQDHK-VRVEISATDQGG--LQGRCVVNVFIDDVNSAPYFNDHPFS-----VKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI 721 HSP 7 Score: 101.293 bits (251), Expect = 3.765e-21 Identity = 132/526 (25.10%), Postives = 237/526 (45.06%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIG-HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECT-TSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKR--GMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-----DEIGNIYFSINMYGV--IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIV-ESYGNMAVHNNLGLIEANDED--------LDENGLV 2091
+ ++ D+ND PTF K+E ++I E++P G +I L + + QK +Y+IE E + F I D I +K+ D + R + S A D G +G + + I D+N ++P + P+ + + E + + +LKA D D +N +++ + ID+++ RI S + + + + A ++V L +T + + + D NDN+P + +S +A I E+ ++ D D+ N LN++ S S S + R R G + + + DRE+ + I D+G+P L+++ + ++ + D NDN+P F + Y+ I ENS S +G++ A D D +NA I + + ++ +I GV I T+ +FD E K+ F + + +G+ SST + + V D ND KP + +F I+ + N+ + +G I A D D L+EN L+
Sbjct: 567 IAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKI---TYRIE----------EADREVFSILDIGD--QGAILSVSGELKRQDHKVRVEIS----ATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDN--ARIVYSIDSSQF------FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNES---------SSSPSIQLFRLDRTSGTLRV-------SSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALK---DFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFLEENDLI 1043 HSP 8 Score: 98.2117 bits (243), Expect = 3.682e-20 Identity = 93/327 (28.44%), Postives = 150/327 (45.87%), Query Frame = 1
Query: 1657 NSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL----DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSF-VNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIE-KDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEV 2616
N+ F + Y E+ E++ + I SV A SQ + YS+ D F+++ M G I + DRE + V A + +P+ S++ +++V VLD D PIF K F E + + + + A D D ENG + Y +G + K K+G + +DRE S I +DVIA D G P ++ V +T+ D+ND+ PVF AS S+ V I ++A + A D+D+ NG V + + + + +TI+ G V L+E I +++ IT ++RA D + S V
Sbjct: 161 NAVHFQQEKYVKELPEDTPIETIIASVKASHASSQ---PLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFG--EIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGN----------GKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVF-----ASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITA----VIRAKDGAQPALSSTV 463 HSP 9 Score: 52.7582 bits (125), Expect = 2.296e-6 Identity = 63/273 (23.08%), Postives = 109/273 (39.93%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFI-------FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKI 1098
F +++ E+ PI +I LKA+ A+ + I S +++ +G + + S +DRE+ + VI++ ++ ++ D+ND P F +I ED+P+G A D D GI Y + S I R + L+V K+DRE + A D T I L + D+NDN+P + L Y + + E + ++ A DAD+ + N+ + F+I
Sbjct: 687 FSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ-----FFRIDPSSGDISVSSDLDRED-------RATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDR--------------TSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGD--NADISFRI 931
BLAST of Protocadherin-1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 151.754 bits (382), Expect = 1.261e-36 Identity = 169/622 (27.17%), Postives = 274/622 (44.05%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY------GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI-GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLA 2403
LT +ID+ND PT + +++ E+V IG + A D DS GI Y +E +E F I D + +I K K +DRET +YS + A D T I + +KDINDN+P + Y +T+ +E +I +LKA D D+ + K+ ++I+ A + S + ++ + G LK + K+ V + D GGLQ + + I D N +AP + S KI E+ + L +D D N ++ + + + P G + + + DRE +SV++ D SP L +S Q VI+ D NDNSP FT S Y I E+ VG+S + VSA D D N + Y L+E + SI ++ G + K DREQ ++ + A D G PS S+ + I + + D ND P F + Y+ I E N V + +G I A D D +N + + I G + + + + + V+I + D E ++ + + G+ LS+++ V + ++D+ND+KP F N+ + G++ A
Sbjct: 106 LTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG--------SEDF--------IIDEDSGLI----KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE----DQKITYRIEEA---DREVFSILDIGDQGAILSVSGELK-RQDHKVRVEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRID-------------PSSGDISV-------SSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDYFLNE-SSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAE---NSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEF------DYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPA 665 HSP 2 Score: 122.865 bits (307), Expect = 8.913e-28 Identity = 158/655 (24.12%), Postives = 271/655 (41.37%), Query Frame = 1
Query: 586 IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKR----GHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLDFKIDT-AKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKEN-KRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDG 2505
++D+ND P FA ++ILE++ I VI A+D D G Y + + S I L + ++ + ++ID + T V +G + V + +N+ DIND++P I IT++E E+ + A D D N + DF ID + L + KL + A L V + + L +T + + +KD NDNAP + I E R +I+T+ V +++ D + E R + + + +G ++ E R V I D+G Q + + +D+ +++P F + +I E+S + ++ A D D +NA+I YS+D + +F I+ G I DRE ++ ++ V ASD+ P +++ I V + D ND P F Y I E ++ V + + A D D+ NG+V Y + +S + + F++ T +G L + +DRE+ + I + + ARD G P LS + +T+TL+D+ND+ P F S + I+ G + + A D D N + F + G IE+D
Sbjct: 6 VVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASS-----------------SGIGGLTIDYSTGEVTLRERIDAKNS---PITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDR---------------ETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE------------DQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVR-------VEISATDQGGLQ---GRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS--SQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISE---DIPVGTSFLQVSAIDADIGPNGIVDYFLNESS------SSPSIQLFRLDRT-SGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYD----LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDA 587 HSP 3 Score: 117.472 bits (293), Expect = 4.226e-26 Identity = 135/532 (25.38%), Postives = 224/532 (42.11%), Query Frame = 1
Query: 940 LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMK---LVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG----LIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIE 2496
+ + D+NDN+P + Y +T+ E T I ++KA D D N K+ S S + + + E L+ + K + ++ DG L +T LTI++ D ND+AP + + ++EN E + + DED N + + + E G++ K DRE YS+ + D G+P L +S +V++ D NDN+P F K Y I E S+I ++ A D D E+ KI Y ++E FSI G I + + Q + A+D G ++ + D + P F + F++ + H+ +G ++A D D +N + Y I ++ + +P + G +S+ +DRE+++T + V A DH PPL+ S + V L+D+ND+ P FT S A+ IS + G ++ A D D NG V + L NES S +I+
Sbjct: 4 ITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTN-----------GKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDE-------------DSGLI-------KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFI---DDVNSAPYF-NDHPFSV-----KIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSS-------------GDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAA----TISEDIPVGTSFLQVSAIDADIGPNGIVDYFL--NESSSSPSIQ 474 HSP 4 Score: 112.464 bits (280), Expect = 1.500e-24 Identity = 90/323 (27.86%), Postives = 147/323 (45.51%), Query Frame = 1
Query: 1633 VIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE---IGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVI-LKESIKSRSHRITQSDRILVRASDQ 2589
+ V+D NDN+P+F Y I+EN + I +V A D+D N K+ YS+ IG + + G + +E+ D + S + A D +P+ SST + + V+D ND P + +E N+A+ +G + A DED NG++ Y + + ++ + D+ K K ++DRE + + V ARD G P L+ S T+ V L D+ND+ P F V IS E G + L A D D + E E S + I G ++ + +K + H++ R+ + A+DQ
Sbjct: 4 ITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYST-GEVTLRERID-AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEE--NVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTK-------------LLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTF----DKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKV----RVEISATDQ 301 HSP 5 Score: 100.523 bits (249), Expect = 6.417e-21 Identity = 132/526 (25.10%), Postives = 237/526 (45.06%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIG-HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECT-TSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKR--GMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-----DEIGNIYFSINMYGV--IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIV-ESYGNMAVHNNLGLIEANDED--------LDENGLV 2091
+ ++ D+ND PTF K+E ++I E++P G +I L + + QK +Y+IE E + F I D I +K+ D + R + S A D G +G + + I D+N ++P + P+ + + E + + +LKA D D +N +++ + ID+++ RI S + + + + A ++V L +T + + + D NDN+P + +S +A I E+ ++ D D+ N LN++ S S S + R R G + + + DRE+ + I D+G+P L+++ + ++ + D NDN+P F + Y+ I ENS S +G++ A D D +NA I + + ++ +I GV I T+ +FD E K+ F + + +G+ SST + + V D ND KP + +F I+ + N+ + +G I A D D L+EN L+
Sbjct: 208 IAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKI---TYRIE----------EADREVFSILDIGD--QGAILSVSGELKRQDHKVRVEIS----ATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDN--ARIVYSIDSSQF------FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNES---------SSSPSIQLFRLDRTSGTLRV-------SSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALK---DFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFLEENDLI 684 HSP 6 Score: 52.7582 bits (125), Expect = 2.362e-6 Identity = 63/273 (23.08%), Postives = 110/273 (40.29%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFI-------FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKI 1098
F +++ E+ PI +I LKA+ A+ + I S +++ +G + + S +DRE+ + VI++ ++ ++ D+ND P F +I ED+P+G A D D GI Y + S SI+ + L+V K+DRE + A D T I L + D+NDN+P + L Y + + E + ++ A DAD+ + N+ + F+I
Sbjct: 328 FSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ-----FFRIDPSSGDISVSSDLDRED-------RATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSS--------------PSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGD--NADISFRI 572
BLAST of Protocadherin-1 vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26 Identity = 163/674 (24.18%), Postives = 270/674 (40.06%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFEL-TFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH--VNIVLNIKDINDNSPQWIGLPYKITVKE-----------CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE-----FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKP 2265
+L+++E+ E+ PI + L+ + A + R+ + + + L ++ ++G++ + + D E +QK + I + L + + D+ND P F E L++ E + + ASD+DS +G SY I + FS I P + R ++ + A D G+ NI + + D + +PQ+ Y+I E S+ +S+ + D D +I+ DT K+ +R L +++ ++ G N T + I I+D NDN P S + I+E+ + E ++ D+D + N E S H + + + + LST G ++ Y+ N Y + + D G P +S+ + VLD NDN+P F KS Y E++ENS + +G V A DKDS EN +I Y + G+ YF I+ G ++TK DRE S + +++A D G P RSSTAS + VLD ND P + + +G I A D D NG V Y S F V+ NG + L ++ ++ + VI D G P
Sbjct: 543 ALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHL----TVDTMSGTVCIQKTFDFE---KQKSYQTTVIATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHI-------------LSESSSFS---------INPVTGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSKVKYSIYSGDQDHNFSIDE------DTGKIYVTR------------------YLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEI---DQFTGQLST-------GSLLDYEATRN------------YKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITN-GSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPP---SCLSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSL-----------FVVK--SNGDVYLRRQLNASDERHQRLSVIVSDQGVP 1124 HSP 2 Score: 98.2117 bits (243), Expect = 3.729e-20 Identity = 117/458 (25.55%), Postives = 199/458 (43.45%), Query Frame = 1
Query: 1210 VVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEI---GNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLS-------------LYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESI 2529
+V +KV + G T D+ + + D NDNAP + +I E + + TV D D +F H ++ V + NE+ + +V+ N DRE D Y +LI D G P + S+ ++D NDN+P+F++S Y + N S+GS I +V A D D EN++I Y + + N F+I+ GVI T S ++ V+ASD+G PS SS+A + + VL P + + L+E+N L EN + + S A++ + K+++ + L L G++DRE S ++ + G+ + + +T+ D+ND+ P + S ++IS G L A+D D NG + + ++ E V+I+K+ GR+ + +I
Sbjct: 94 IVAVKVEESG---ETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGD---GPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVV--------NGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLI-TVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASL--LPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPL------------------DIIWLVESNSAHLMENSTLGSIVARVS------IAQQYRDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTI--GDINDNAPQW------HSSQIHISLNRTQGG-SRTLTAKDPDLGQNGWIRYSVLDTEL---VSIDKETGRIFVPNTI 498 HSP 3 Score: 97.4413 bits (241), Expect = 6.241e-20 Identity = 134/575 (23.30%), Postives = 241/575 (41.91%), Query Frame = 1
Query: 853 KIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQW-IGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLD-ENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPY---VNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLS--NSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRI 2550
++DRE E+YS ++ + G++ + + + ++NDN P + + P ++ + + ++ A D D+ + L + + + G + I + + + + E L + K DG T+LTI + D NDNAP S + L T+ + + H D + S S P+ G + + + + Y V + D G P ++S SVI+ + E + P F K+ + FE+MENS +IG++S +E+ + Y + D + FSI+ +G +F DREQ++ + F V + S+ V VLD+ND P+F Y ++ +S MA +G I A+D+D ENG V Y I + + NPD T ++ + +L D +T I V ARDHG P + + V++ ++ + P F P V++ + G +L K+ A ++ N +++ L ++ + + K G + LK + S I
Sbjct: 1887 ELDREILERYSLKVIGTGS-GQQIGTRVDVRVNNLNDNVPSFPMSKPRRVP-ENLRVGSYVATVGAKDVDNL----APLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTI--KATDGS-FDTFTNLTIFVSDINDNAPTFS------------KPLYQTTVSPATFSPGQPFAKIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAGER---------YLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSG-----EESREFHYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDS---MAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPD---TGSIQLNEWNDAQL------DEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYE----VHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGIDV-KTGELTLKTHLDWESEPI 2409 HSP 4 Score: 88.1965 bits (217), Expect = 3.472e-17 Identity = 112/435 (25.75%), Postives = 194/435 (44.60%), Query Frame = 1
Query: 1249 NTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL---DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIAS-DNGEPSRSSTASILVKVLDQNDCKPIFRKQY-EFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITK-NGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV-GNESLSPVTIEKDGRVILKESI 2529
+T+ ++I +KD NDN P+ ++E + E L +++ D D E S H+ L E S S++ P G V K R + + +++ D G +S + V+D++ +P F++S YE E+ + IGSV A +K+KYS+ D+ N FSI+ G I+ D + + A+ +GE S+ +++ + D ND P F E +I E ++ +H +++A+D+D +NG V Y I ++ P + ++I + G+LS ++D E + V A D G PP S+++T+ + + D+ND+ P F S + + ++ K+ A DKD NG +V+ + G+E EK G V K SI
Sbjct: 623 STSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHI-------LSESSSFSIN-----PVTGEVF-------AQKPLARGR---FHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGA-------MSKVKYSIYSGDQDHN--FSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGE---SNQTQVVIFIEDHNDNPPQFSSSLVEISIRE---DLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSS-----------IEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEF----EKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFG--IDEKLGNVYTKRSI 1003 HSP 5 Score: 80.1073 bits (196), Expect = 9.402e-15 Identity = 157/690 (22.75%), Postives = 279/690 (40.43%), Query Frame = 1
Query: 592 DMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISIT----SRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSL-STKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGS-----PQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE---SLSPVTIEKDGRVILKESI-KSRSHRITQSDRILVRASDQCENCH 2604
D ND P+FA Q ++L I E +G LP +D D K+ + + I+ + FK +S K E +Q L V ++DRE R+KY + A D K G + + I D NDN+P + Y +V + + +++A DAD N D K T+ NS IS + +I +L + ++V L ++ +TI++ ++P + I S SA + EN I+ +++ + DT L+ + S +L + ++ ++++ I DRE + + + G PQL + + D NDN+P + S + GS +++A D D +N I+YS+ + SI+ G IF D S F V A D G P+ S+ ++ +LD P F K ++ I E + + L + AN+ + + Y + N D T T +G + + D E+Q + VIA + +++ +++ L D+ND+ P+F +P+ + + + L + A D D G V + ++ S++PVT G V ++ + + R H + + ++S+ N H
Sbjct: 114 DENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFV---------ILQGNVNNVFKLASRKVNEQ--LQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIK-KTSAPSNSN-----FAISQSGVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQ-----------YRDT---KLRLIGSSALCPQQTDQAHVYLLLLCGI-------LDRETASEHHLKFLLEKDGQIIIEHPQL-------LTIGDINDNAPQWHSSQIHISLNRTQGGSR---TLTAKDPDLGQNGWIRYSV--LDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPE---DTPIGTCLVKVVANNSQCGNSKRIRYSL-------QNQDEHLTVD-----TMSGTVCIQKTFDFEKQKSYQTTVIATNANSE--TSTSLISIRLKDVNDNWPIF-YPNEY---HLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSFSINPVT----GEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIH 728 HSP 6 Score: 69.3218 bits (168), Expect = 1.811e-11 Identity = 90/346 (26.01%), Postives = 139/346 (40.17%), Query Frame = 1
Query: 1267 ISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI-GATSPYVNNPDAEKTKRFKVQITKNGKLSLY------GVIDREEQSTIYIDVIARDHGKPPLSNS 2280
++I D NDNAP S I N RT LT KD DL N + DT + + + R G I +++ D GSP L++ Q +LD P F K++++ EI E++ + + V A + + +I+YSL M G + ++ FD E++ Y TVIA++ S +ST+ I +++ D ND PIF +Y + E L ++ A+D D G V Y I +S + NP + F + G+ L G E + I+I VI +D P S S
Sbjct: 429 LTIGDINDNAP--QWHSSQIHISLN-RTQGGSRTLTAKDPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAE--------------------DGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNAN--SETSTSLISIRLKDVNDNWPIFYPNEYHLTVRE---GPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSFSINPVTGEV--FAQKPLARGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRS 744 HSP 7 Score: 67.3958 bits (163), Expect = 8.616e-11 Identity = 77/315 (24.44%), Postives = 144/315 (45.71%), Query Frame = 1
Query: 1633 VIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM---YGVI----FTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILV--KVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDE-DLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQI-TKNGKLSLYGVIDREEQSTIYIDVIARD-HGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSR 2538
VIVLDENDN P+FT Y + ++ +IG + A D+DS EN ++ Y + GN + + G I + + D + + V A D+G P+R++ + V K+ + P F YE +++E + +V L I A++ + +GL++ + K + K+ I K G+L+L +D E + I + + D +G+ S + + + + +++ PVFT S + I G + ++ A D+D ++G V + + +S + E G + L++ + SR
Sbjct: 2218 VIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILS-GNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLE---DTSVGTVLQKIRASNRLGMRNDGLLY--------------SLKEHQGKLGIDVKTGELTLKTHLDWESEPIISMYLSVSDGNGR---SAVVPLKIVVEPVDEFAPVFT----KSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSISDRQSTVKIE-EHTGIIRLQKPLVSR 2506 HSP 8 Score: 57.7658 bits (138), Expect = 6.168e-8 Identity = 95/419 (22.67%), Postives = 181/419 (43.20%), Query Frame = 1
Query: 1225 VVDGGGLQNTTDLTISIKDCNDNAPLISITSRSA-KIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAP--DKDSQENAKIKYSLDEIGNI--YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKV-QITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNIS-SEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+ DGG ++ + +++ D NDN P + ++ S +I E+ R ++L D D+ N +FS E++ S + + P+ G +++ ++ + ++ + + + +D G P L + + N N K+ EF + + + + + G K E A + YS+ E GNI FS++ GVI T + DRE Y+ VI + +G+ + V+V + ND P F + E N+ V + + + A +D+D + Y + V++ + F + Q T G + L +D E + + A D +N +T+ ++D+ND+ P F+ P + +S + F G AK++A D D G++ + L
Sbjct: 1701 LTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSF-----------ELLEDSSGSLDLVPETGDLVLRRLSSLQS----------WKIKLRVVDHGVPGLYVEKNLEI----SNRNPQTEAKAPLEF-LKQTYLSTIDEGLPRGQFIAKLQPELAGLTYSIVE-GNIDSAFSVDSEGVIRTNLELDREILERYSLKVIGTGSGQ---QIGTRVDVRVNNLNDNVPSFPMSKPRRVPE---NLRVGSYVATVGA--KDVDNLAPLRYFL------VSDSSGQTPTHFNIDQFT--GTIHLTAPLDFEVLPEHTLTIKATDGSFDTFTN---LTIFVSDINDNAPTFSKPLYQT----TVSPATFSPGQPFAKIEAHDLD--ARGALTYSL 2067
BLAST of Protocadherin-1 vs. Ensembl Celegans
Match: cdh-4 (Cadherin-4 [Source:UniProtKB/TrEMBL;Acc:A0A1C3NSI5]) HSP 1 Score: 117.472 bits (293), Expect = 4.916e-26 Identity = 173/713 (24.26%), Postives = 299/713 (41.94%), Query Frame = 1
Query: 598 NDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDL------EMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSK--------------LDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLD--ENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAK---IKYSL-DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNG-----EPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGV--IDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLIL 2631
N P F+ + + ED PIG V+ A+D D+ G Y I + S+ + E + + DL +++++ QLKV ID T K S + L IKD+N++SPQ+ + Y + + E ++IF + A D D NN K +D K KL S + + EG P++V + T+LTIS++D NDN P + A+I E+ ++ + DED+ N + LN S + + + G + I+ E D K F+++ I D G P L++S V ++D N + F E + ENS +E+ + A + ++ K ++Y + G +FSI+ G + T DRE KS Y TV A D+ +P R + +++LD+ND +P+ +K Y ++ E+ V + +A+D D D + ++I P F++ +T +G ++ G+ +DRE+QS + V D G+P L +++ V V + D ND+ P FT + ++ S+F L ++ A D D N + + + E + +I+ +G +I E+I +S + V+A+D Q ++L
Sbjct: 602 NKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEVLDVQLKV-SAIDAGTPVKSSVKTMKL-------------RIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVISIDAKTGIVKLLKSLDREDQDVHTFAIIASDEG-----------FPMRV-------SVTNLTISVEDVNDNPPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLN-----------SEKVPFRIDH-HSGCIFIHAPEY----PLDYHKTPFFNLSIEVADHGDPILSTSCHLHVELVDIAHNHLAIEFDDVAKEASVYENSEIGTEVIMIEAKETGDEQKVKAENLEYRIIGGDGWPHFSIDQKGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDVLHVFIRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDP---------QSFFRIDLT-SGYITTSGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFT----QAIHHYSVRSKFAGK--LCRIFAVDADEGENARLTYNI--TEGDARFSIDNNGNIIASEAIHG-----DESYALTVQATDHGTPGQQFAATRVVL 1243 HSP 2 Score: 97.0561 bits (240), Expect = 7.160e-20 Identity = 107/431 (24.83%), Postives = 176/431 (40.84%), Query Frame = 1
Query: 1225 VVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGV--IDREEQSTIYIDVIARD-HGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYA-LNGSVVFELVGNESLSP 2484
V G ++ + +++ D NDNAP ++ S K+ E++ L D E+ +D T S N + G++ + K D E + + ++ D G P L + Q + V+DENDN+P F K Y ++ ENS ++ +V A D DS+ + Y L+ + + F+IN G + + D E+ YN VIA D G P S A + + V D+ND P F +V+ A+ + L +D D +NG +P+ + K FKV N KL L ++ ++ + VIA+D GK + +T+ + + H P + +E G ++ +L A D+D NG + F LV SP
Sbjct: 3087 VASDGEFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQNETIEYYLKPSDVT------------SFVNLNAQTGILTLA-------KPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALVQE--GEAIGHRLLKFSVSDLDGPKNG---------APFTVEIQGDGAKSFKV----NEKLELLTAKKLEYRKKDKYLLTVIAKDVKGK---TTDCPLTIFIRQTSRHAPTM---KPMKIQINTLQNELPEG-IIGRLKASDEDEEDQNGLLRFGLVEGSIQSP 3476 HSP 3 Score: 93.5893 bits (231), Expect = 8.327e-19 Identity = 171/732 (23.36%), Postives = 294/732 (40.16%), Query Frame = 1
Query: 403 RFVIISGNVRLRNLIQLNF--VTGSLHLISSVDREELCQQKDNDCSHIVIISFGSF--IFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI--ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREI-FSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGL-QNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIY---QIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSE----IGSVSAPDKDSQENAKIKYSL-DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL------VGNESLSPVTIEKDGRVILKESI 2529
RF I+ G+ + + + TG + + SS+DRE Q K I + G I +T I D+ND P F +I ED +G + + A D D G + + EN + ++ L V ++DRE + Y A D G + + + D+ND+ PQ+ + I + +TS + FS+K DD + N+ F I GN + I + L E + E K+ LKV G+ + +T + I++K D+ +++ + EN + T++ + L N F ND + + G+V + QI+ +N+ + ++ +C + +V++ + NDN P + + + I EN S + I + A D D E IK+ + D+ G ++ ++ GV+ + D E +N TV+ASD GE A+ILV V+DQND P F K Y ++ES ++ L A+ D +E + + + +VN + G L+L +D E S + + V+A+D G PPL V +++ D ND+ P F + ++G + + A D D G+V +EL + + P I +G V++ +SI
Sbjct: 2641 RFTIVPGSEESDSFLPFSVERSTGKIIVKSSLDRERKNQWK----MTIRADAAGGVHAITTVTVDIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEENPY---------------------FDLNENSGWLTVASQLDREKIDHYKLIARATDEGGFNTDLPFTIVVSDVNDSPPQFEKEEFNIDLHLPSTSPILHFSIK----DDDLSPNNVSQFFIPK---GNEEGVFWIDSNNDLLLKRPE-----IVENKMQYQLKVTAFDGVFETSTKVKINLKSSKDSDIRCPEANKTVILAENSKK---GTVVLGESSLLGPNVTFKLSDNDGNVFVVNF-------------RNGIVKVKESDQIDYEKNQQLEFHRLTIQDNSEVC----------KELITVVIENLNDNRPKIIEKLLKVSIDENLPTSEDARQYITRIVAEDADFDE---IKFRMVDDFGGLFQIDDINGVVTVVKPLDSEILGFFNLTVVASD-GE--FEDKATILVTVIDQNDNAPTFEKSTYSMKVMESE---SIGYELAHFRASGGDQNETIEYYLKPSDVTSFVN------------LNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVG----KVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQSI 3284 HSP 4 Score: 92.0485 bits (227), Expect = 2.577e-18 Identity = 83/270 (30.74%), Postives = 130/270 (48.15%), Query Frame = 1
Query: 1519 IETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKP---------IFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSP----YVNNPDAEKTKRFKVQITKNGKLSL-YGVIDRE--EQSTIYIDVIARDHGKPPLSNS 2280
I T+ + DREK + + + D G PQL S+ V VLDENDNSP FT++I+ + + G ++ + A D D ENA++ Y++ E G+ FSI+ G I E ++ Y TV A+D+G P + A+ +V + KP I K+ ++ I S + V +G +EA+D D DE +W+ I + P V + KV++ K G+L L V D + + ST+ I V + +P S S
Sbjct: 1106 ITTSGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFTQAIHHYSVRSKFAG--KLCRIFAVDADEGENARLTYNITE-GDARFSIDNNGNIIASEAIHGDES--YALTVQATDHGTPGQQFAATRVVLTANSAGQKPRKSKNSPPEISGKKSDYVIPISDADQ-VGLTVGKLEASDADGDE---LWWSISSGDPDSVFDVRQDTGQLLLAKKVELLKRGELRLNISVTDGQAWDHSTVIIQVSRQISQRPKFSAS 1366 HSP 5 Score: 87.8113 bits (216), Expect = 4.842e-17 Identity = 132/547 (24.13%), Postives = 230/547 (42.05%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFE-DCFKFSSIKDL----EMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNEN----KSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQEN-AKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQN--DCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDED-LDENGLVWY---EIGATSPYVNNPDAEKTKRFKV 2163
+T +I ++ND P ++ +++SI E++P D+++Y T I+ E + D KF + D ++ I + V+K +D E ++ T+VA D E + I++ + D NDN+P + Y + V E + E+ +A D I L K + + + + + ++ +KL V K L+ + IS+ D NDNAP K+KEN ++ E +LTVK D++ S H +Y E++S T + P V+ + I +N + +S D EK+ Y++ +I D G P L S + V DEND++P F + E + S D D +N A + G F +N + T +K + +K Y TVIA D + +I ++ ++ KP+ + + N ++ N +G ++A+DED D+NGL+ + E SP ++ T F+V
Sbjct: 2997 ITVVIENLNDNRPKIIEKLLKVSIDENLPTSE----------DARQY------------ITRIVAEDADFDEIKFRMVDDFGGLFQIDDINGVVTVVKPLDSEILGFFNLTVVASDGEFE-DKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQNETIEYYL-------KPSDVTSFVNLNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGE--KVLTVKALDVD-----SEHFGAVSY--ELEIVSE---TTTDTP----VLPFAINSNGDVLISQSIDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALVQEGEAIGHRLLKFSVSDLDGPKNGAPFTVEIQGDGAKSFKVNEKLELLTAKKLEYRKKDKYLLTVIAKDVKGKTTDCPLTIFIRQTSRHAPTMKPM---KIQINTLQ---NELPEGIIGRLKASDEDEEDQNGLLRFGLVEGSIQSPRAQVQESRSTHLFRV 3491 HSP 6 Score: 79.7221 bits (195), Expect = 1.568e-14 Identity = 89/381 (23.36%), Postives = 164/381 (43.04%), Query Frame = 1
Query: 1213 VPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-----DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYE-FNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKN-GKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
+PL V D G + + LT+S+ D ND P + S I E+ + + + +++ D+D E+S L D + V P++G + + K + + S+ I D +P ++ V + E+ P F+ S Y F +ME++ + IG V + + E I++++ + + FS+ G I K DRE+K+ + T+ A G + ++ V + D ND P F YE F I E + AV ++ + A D D +G + + + +PY + + +N G L++ +DRE+ + +IAR + + + T+ ++D+ND P F
Sbjct: 2475 IPLVVEDATGRRAFSTLTLSVIDINDKPPFFVLPFYSTSISESAKEGDTVMMVSATDDDENDTIEYS--LLDGSESQFFSV----------HPRQGTITVA-------KKLEHKAGVTLSLTIKATDSANPPHHATTTVEVNIASESVKVPRFSNSHYLFSVMEDADVGNVIGRVQQMETEIDE---IRFTIVPGSEESDSFLPFSVERSTGKIIVKSSLDRERKNQWKMTIRADAAG--GVHAITTVTVDIGDVNDNAPAFHGDYERFTISE---DAAVGTSVTIFSAMDRDDSPSGRIRFSLVEENPYFD-------------LNENSGWLTVASQLDREKID--HYKLIARATDEGGFNTDLPFTIVVSDVNDSPPQF 2813 HSP 7 Score: 67.781 bits (164), Expect = 7.015e-11 Identity = 99/419 (23.63%), Postives = 176/419 (42.00%), Query Frame = 1
Query: 1258 DLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRG---MVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEI--------------GNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
D++I I D ND+AP+ S + ++L + D+D N + T+ L L+ + T E PK+G ++ I+ S S L + K ++ + + +I EN +SP+F+ E+ E++ + + + A D+D+ N I+Y + +I G I + ++ ++ KEK + L V A D G P +SS ++ +++ D N+ P F + Y I E N ++ + AND D NG + + +G NN EK+ + K G + L +DRE+Q +IA D G P + +T+++ D+ND+ P S + I + G ++ + A D+D N + F L
Sbjct: 477 DVSIEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVKVDATDQDEGENGKIVYKF--TSELPLEINANTGEITLVEVPKKGNSWPATVWAIDLGLPLSR-------MSALNLMFYKNGTKIPAKPKPIIIQESENKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLM--KEKLEVLDVQL---KVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISE---NEKPGKDIFKVTANDFDGGNNGKIKFSLG------NN--QEKSSVISID-AKTGIVKLLKSLDREDQDVHTFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVVQHSRA----RIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLL 865 HSP 8 Score: 59.6918 bits (143), Expect = 1.628e-8 Identity = 93/361 (25.76%), Postives = 154/361 (42.66%), Query Frame = 1
Query: 1567 YSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFT-KSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEP-SRSSTASIL---------------VKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWY---EIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
Y+ +I G + + + S+ +LD ND++P+F+ K + + I+ G + V A D+D EN KI Y + IN T + ++ S + TV A D G P SR S +++ + +N P+F E IVE + + + ++ANDED NG + Y +I +S V D + +IT LS + ++ E + + V A D G P S+ T+ + + D+N+H P F S ++ IS + G + K+ A D D NG + F L N+ S V I D + + + +KS + ASD+
Sbjct: 458 YNFKVIASLHGINEKLAEKDVSIEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLV-KVDATDQDEGENGKIVYKF--TSELPLEINANTGEITLVEVPKKGNS-WPATVWAIDLGLPLSRMSALNLMFYKNGTKIPAKPKPIIIQESENKHSPVFSSFPE--IVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSG-----EITVASDLSKL-MKEKLEVLDVQLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVS----YYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSV-ISIDAKTGIVKLLKSLDREDQDVHTFAIIASDE 801 HSP 9 Score: 59.6918 bits (143), Expect = 1.757e-8 Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 1
Query: 1639 VLDENDNSPIFTKSIYEFEIMENSVGSSEIGS-------VSAPDKDSQENAKIKYS-LDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSS--TASILVKVLDQNDCKPIF 1980
++ N +SPIF + +Y I EN S + S VSA D+D N + Y L FS++ Y G I T+ FD E+ Y+F V A D G+P R S + I+V V+D+ND P F
Sbjct: 1660 IIRTNQHSPIFRRQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDEDPGSNGLVGYRMLSPKDEQMFSVDQYSGAIRTQMSFDFEKMKEYSFYVQAFDMGQPPRRSLMPSLIVVTVIDENDEPPRF 1784 HSP 10 Score: 58.151 bits (139), Expect = 5.953e-8 Identity = 68/288 (23.61%), Postives = 124/288 (43.06%), Query Frame = 1
Query: 1735 VSAPDKDSQENAKIKYSLDEIGN--IYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFN---IVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVID----REEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF-TFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNG---SVVFELVG--------NESLSPVTIEKDGRVILKESIK 2532
V PD S ++YS ++ N + F+I G++ K +R ++ +YNF VIAS +G + + + +++LD ND P+F ++ ++ G++ V ++A D+D ENG + Y+ + P N + + +V N + ID S + + P I + N H PVF +FP V ++ + G ++AKL A D+D NG V+ ++ G +E +T+ D ++KE ++
Sbjct: 409 VENPDDVSLIRYSLEYSKSDLPNATLPFAIGSKNGILRVSAKINRSER-VYNFKVIASLHGINEKLAEKDVSIEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVK-----VDATDQDEGENGKIVYKFTSELPLEINANTGEITLVEVPKKGNSWPATVWAIDLGLPLSRMSALNLMFYKNGTKIPAKPKPIIIQ---ESENKHSPVFSSFP-----EIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLE 682 HSP 11 Score: 56.225 bits (134), Expect = 1.934e-7 Identity = 118/514 (22.96%), Postives = 211/514 (41.05%), Query Frame = 1
Query: 307 LFEIELKENKPIHSELINLKAKLPTA---FKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLI--IDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVA-------LDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSRE-IFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMN-CEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICID-KGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQ-ENAKIKYSLDE 1794
L ++ + EN P + ++ F E K R V G L Q++ + G + ++ +D E L + V+ S G F + T L+ ID ND PTF K + ++E IG+ + AS D + IE Y K +D+ + F + + I L + K +D ET T+VA L+TE + + +++ D NDN+P++ Y VKE + S E + ++KA D D ++ + +I + ++ L + + + LI + + + L V K DGG L++ L I ++D ND+AP + +A ++E + L +V D D N F+ + K NE+ +E K + K D Y + +I D KG T+ ++ + + ++P + ++N + IG + A D+D + +N +++ L E
Sbjct: 3015 LLKVSIDENLPTSEDARQYITRIVAEDADFDEIKFRMVDDFGG-----LFQIDDINGVVTVVKPLDSEIL-----GFFNLTVVASDGEFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQNE------TIEYYLKPSDVTS--FVNLNAQTGI-----------LTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQ-----VEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNLKVIAK--DGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALVQEGEAIGHRLLKFSVSDLDGPKNGAPFTVEIQGDGAKSFK---------VNEK----------LELLTAKKLEYRKKDKYLLTVIAKDVKGK---TTDCPLTIFIRQTSRHAPTMKPMKIQINTLQNELPEGIIGRLKASDEDEEDQNGLLRFGLVE 3470
BLAST of Protocadherin-1 vs. Ensembl Celegans
Match: cdh-8 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:U4PRG1]) HSP 1 Score: 96.6709 bits (239), Expect = 8.993e-20 Identity = 145/602 (24.09%), Postives = 260/602 (43.19%), Query Frame = 1
Query: 391 EAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG-----SFIFELTFLIIDMNDEVPTFAKQE-IELSILEDVPIGHVIDLP--VASDLDSQKYGIASYKI---ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH----VNIVLNIKDINDNSP--QWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISI---KDCNDNAPLISITSRSAKIK---ENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQI--ETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAP-DKD-SQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNG----EPSRSSTASI--LVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVW 2094
E K+ I SG R +Q++ G++ +I S+D E +Q +++ G SFI I+D ND P F +S+LE +G V+DLP +A+D DS K+ Y + E YFK + + ++++ +D ET+ +S ++ +D +G+ H ++ + + D+NDN+P L + ++ + + L D+D+ +++D + + +KL I +LKG A ++ + D GGL+ T+ +++ K+ + N PL+ IT + I EN E+L + ++++ N F L E+ + M I +I + ++FD EK + + I+ + TS+ F + V D NDN P+F K ++EN G ++G + A D D +N K+ Y+ D +FS ++FT FDRE K + ++ A D +P + +I L+ VLD ND P F K Y +V+ G++ +++ ++A D D + GL +
Sbjct: 886 EIKYSLKITSGP---RGKLQIDRY-GTIKIIKSLDFE--TEQIIKGIVEGMVVKNGKAAKSSFILT----ILDANDNRPIFKNSSNFAVSLLESSVLGTVLDLPYPLATDRDSSKFSTLKYSMTGDEGYFKIDESNS----------------------TIRLVAPLDFETQRVHSLSIKCVDNQGREPHHEVFASVTVTVIDVNDNAPVIHNTDLTHLSIEEDAQVGQVVTVLVISDSDEGGVQKTEIDVNSTLFRADSDKKLVVI------------ASLKGHAGQRICSTVTATDVGGLRATSPYCVTVYPAKNTHHN-PLV-ITPKQNSIHYFDENIVYDELLKVKVLEEDGDIGNVTF----------RLDEMFKKDWQ---------MFTIGEINGSLHARQAFDFEKKTVHEIKILACRINN--CTSTHLF-ISVNDRNDNCPMFPKQDVRLTVLENEKGKRQVGRIPAALDSDFHSDNTKVCYTTD-TPLFFFSDPTLPILFTNSSFDREHKKQHQISITAYDCHLSCRDPHKPINGTIVALIDVLDINDNFPKFSEKIYTSTVVQ--GHVTTGSHILTVQATDLDEEPEGLKY 1416 HSP 2 Score: 94.3597 bits (233), Expect = 4.723e-19 Identity = 84/268 (31.34%), Postives = 133/268 (49.63%), Query Frame = 1
Query: 1543 FDREKVDFYSVLIICID-KGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-IGNIYFSINMYGVIFTKEKFDREQ---KSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPV 2328
DRE + + +++ D GS + Q + V DENDNSPIF K Y + E G SE ++A D DS +N +I YS+D+ I N+ I+ G++F DRE + N TV ASD+GEP RS++A++ ++V D ND P+F +Y + N++ +G +EA D D +TSP NN + K ++ +G++ G E+ +++ +V A+D G P NS V +N+ K +
Sbjct: 508 IDRETYEKFELIVKATDLNGS---SGKSQLIIHVKDENDNSPIFDKEHYFITVDE---GKSEKLKITATDADSGKNGQIVYSIDQKIDNLPIDISPDGMLFIG-AIDRENMGNSNEVNLTVTASDSGEPKRSASATVTIRVKDINDNSPVFSNSRYSIPL---DANISPGGIIGRLEATDAD------------STSP--NNYVTYTSGDPKFTVSDSGEILFTGPGTLEKSASLEFNVTAQDGGDP--MNSANALVVINEHRSMKSI 749 HSP 3 Score: 81.2629 bits (199), Expect = 4.763e-15 Identity = 75/259 (28.96%), Postives = 117/259 (45.17%), Query Frame = 1
Query: 1663 PIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASD-NGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQST---IYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
P F KS Y+F+++EN + +G V + + Y + F I+ G I E DRE + V A+D NG +S +++ V D+ND PIF K++ F V+ + + I A D D +NG + Y I +K + I+ +G L G IDRE + + V A D G+P S S TVT+ + D+ND+ PVF S S + + + G ++ +L+A D D
Sbjct: 451 PKFEKSEYQFQVVENR-EPTVLGEVKV-----ISDGPVTYEILGENGEKFQISNDGEIQNLEPIDRETYEKFELIVKATDLNGSSGKSQ---LIIHVKDENDNSPIFDKEHYFITVDEGKSEKLK-----ITATDADSGKNGQIVYSID-----------QKIDNLPIDISPDGML-FIGAIDRENMGNSNEVNLTVTASDSGEPKRSASATVTIRVKDINDNSPVF----SNSRYSIPLDANISPGGIIGRLEATDAD 679 HSP 4 Score: 58.5362 bits (140), Expect = 3.209e-8 Identity = 150/642 (23.36%), Postives = 257/642 (40.03%), Query Frame = 1
Query: 571 ELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPV-ASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRET---REKYSFTLVALDT-EGKR-GHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFS-LKAFDADDQNNIN----SKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSV----LIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMYGVIFTKEKFDREQKSLYNFTV--IASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEF--NIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARD-HGKPPLSNSI-TVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
+L + D ND P F K+ +++ E G L + A+D DS K G Y I+ I +L + I + I IDRE + + T+ A D+ E KR + + +KDINDNSP + Y I + + I L+A DAD + N + D K + G L G L+ A ++ V + DGG N+ + + I + RS K EN+ T +I + T E E+ LN + E++ S ++ + I++ + + +KVD V L I + KG ++ + + V+D +D +PI++ + + E++ + + V P + +E +IKYSL I+ YG I + D E + + V + NG+ ++S S ++ +LD ND +PIF+ F +++ES + +L A D D + + Y + Y FK+ N + L +D E Q + + D G+ P +VTVT+ D+ND+ PV + + ++I + + G ++ L D D
Sbjct: 533 QLIIHVKDENDNSPIFDKEHYFITVDE----GKSEKLKITATDADSGKNGQIVYSIDQ-------------------KIDNLPIDISPDGMLFIGAIDRENMGNSNEVNLTVTASDSGEPKRSASATVTIRVKDINDNSPVFSNSRYSIPLDANISPGGIIGRLEATDADSTSPNNYVTYTSGDPKFTVSDSGE-------------ILFTGPGTLEKSASLEFNVTAQ--DGGDPMNSANALVVINE-----------HRSMKSIENELTTQINSNDT-GGEKSEIKW-----LNAGMPGYTYEIIRASADGFSDSE---VATWISIDSKSGRIYTLKKVDPSRVKQIKLHISMRKGKREV--PVELIINVMDTDDVTPIYSTPTRKLSVTESATLGTTV--VDMPVEGIKEQNEIKYSLKITSGPRGKLQIDRYGTIKIIKSLDFETEQIIKGIVEGMVVKNGKAAKS---SFILTILDANDNRPIFKNSSNFAVSLLES-SVLGTVLDLPYPLATDRDSSKFSTLKYSMTGDEGY-----------FKID-ESNSTIRLVAPLDFETQRVHSLSIKCVDNQGREPHHEVFASVTVTVIDVNDNAPVI---HNTDLTHLSIEEDAQVGQVVTVLVISDSD 1093 HSP 5 Score: 56.225 bits (134), Expect = 2.074e-7 Identity = 70/263 (26.62%), Postives = 108/263 (41.06%), Query Frame = 1
Query: 607 VPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNN--INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDED 1389
+P F K E + ++E+ + ++ V SD G +Y+I E+ KF D E++ ++P IDRET EK+ + A D G G +++++KD NDNSP + Y ITV E + E + A DAD N I +D KID + S + + E+ L V + +TI +KD NDN+P+ S + S + N I+ L D D
Sbjct: 450 IPKFEKSEYQFQVVENREPTVLGEVKVISD------GPVTYEILG------------ENGEKFQISNDGEIQNLEP-------IDRETYEKFELIVKATDLNGSSGKSQLIIHVKDENDNSPIFDKEHYFITVDEGKS--EKLKITATDADSGKNGQIVYSIDQKIDNLPIDISPDGMLFIGAIDREN------MGNSNEVNLTVTASDSGEPKRSASATVTIRVKDINDNSPVFSNSRYSIPLDANISPGGIIGRLEATDAD 679
BLAST of Protocadherin-1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223) HSP 1 Score: 180.259 bits (456), Expect = 4.113e-45 Identity = 172/659 (26.10%), Postives = 300/659 (45.52%), Query Frame = 1
Query: 394 AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIIS------FGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD--EIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
A R+ II GN + + ++ ++G + L+ +D E + + +VI + S +L +ID ND P F + + S+LE+VP+G+ I A D D +Y I +ER +D F + D +Q IK +DRE + +++F +VA D K ++V+ ++D+NDN P + Y+ V E + ++ A D D+ +S+L ++I T GN+R I + LI I +L E + ++ + D GG +T + I+I D N+ AP+ SA + E+ + +++ D D+ +N + + LN+ + L S++ P+ G ++ N DRE Y + + D G+P L+ + + V D NDN+P F +Y+ I+E+++ + + V+A D D N +IKY L +I + F I+ G I T + DRE ++++ T IA D G P SST + +++ D ND P F + + E N V + +G I A+D D N +V Y I + D+ ++ +L +D E + +++ R PPL N + + + D+ND+ PV
Sbjct: 617 AAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYR------LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI----------SER-DDNFPLAV--DPRTGWVQ----TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE----DSRLHYEITT---GNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSIN-----PQTGAIVT-------NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE---NSPVGSVVGEIHAHDPDEGVNAVVHYSI------IGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRF-ELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 166.007 bits (419), Expect = 9.418e-41 Identity = 183/757 (24.17%), Postives = 326/757 (43.06%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISG-NVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVII----SFG--SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-----TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE----CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER------PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYE--------IGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+L+ + E +P + + ++A+ P +++ + ++S + R ++L +++ TG + +S+DRE + D + ++ SF S L ++D ND PTF ++ E SI E +G + A+D D K Y IE + ++ F+ S + + +DRET + Y + A D +E + ++ + + D NDN PQ+ Y + V E T + ++A DAD N N+ + + I GN++ I +S + ++ + + +LV+ + DGG NTT L +++ D NDNAP + + EN + + D D N E TY S+S +++ P+ G V K DRE+ ++ ++ D G P ++S + V D NDN P F YE + E+ + + +V+A D D E++++ Y + GN F+I N G+I + D +Q+ + TV A+D+G RS TA++ + + D N+ PIF Y ++ E + V + ++ A D D+ N + Y +G+ P+ NP + G + +DRE S + V A+D G P LS++ V + + D+ND+ P F P + +I + G + ++ A D D LNG + + L
Sbjct: 362 ALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELM------DVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV--------ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGN--NAAIRYAIIG---GNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVI--RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEI-------TY---------SISERDDNFPLAVDPRTGWVQTI-------KPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI-TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFE---DAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-------------QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQA----SILEDALVGTSVIQVAASDPDVGLNGRIKYLL 1046 HSP 3 Score: 144.05 bits (362), Expect = 4.023e-34 Identity = 175/754 (23.21%), Postives = 319/754 (42.31%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVI--ISGNVRLRN-----LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG---------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIG---HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN--INSKLDFKIDTAKLG-NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-----IGNI-YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE 2472
FE ++E + S +I L+A K A+ + I ++ L + +++ +G + SS+DRE +D H+++ + + + ++D ND P F+++ + + ED G + + A+D D Y I + + F S+ + ++K +D E+ Y + A D + + +++N+ D NDN+P++ ++ +V E I ++A+D+D+ N I + + D L + R + A + +A+ V P ++ + I+++D NDN P + A + E++ +T +T D D + + +T R + RG++ I Q S D ++ + + + D G T++ ++ D N+ +PIF + Y + E++ + + VSA D D NA+I YSL+E +G+ FSIN G I T DRE S Y TV A D G PS S T + + V D ND P F+ Y+ +I+E + V ++ + A+D D+ NG + Y +++ D E F + T +G + +DRE + ++ IA D G PPLS+++ V + L D+ND P TF S +V +S G ++ ++ A D D +N V + ++G +
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI---------IGGNTQSQFSIDSMSG--------DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSA--------SSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNT----------RGRFAITSQNGRGLITIAQ-------SLDYKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILE---DALVGTSVIQVAASDPDVGLNGRIKY-------LLSDRDIEDGS-FVIDPT-SGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDKITLYVPENS--PVGSVVGEIHAHDPDEGVNAVVHYSIIGGD 1156 HSP 4 Score: 112.079 bits (279), Expect = 2.270e-24 Identity = 92/348 (26.44%), Postives = 151/348 (43.39%), Query Frame = 1
Query: 1534 NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-----------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPS---RSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK 2532
+ S DRE +D + ++ D P + + V VLD ND+SP F +E I E + S + ++ A D+D +NA+I+Y ++ + + I+ + GVI T+ DRE Y+ V A+D R++TAS+ VKVLD ND P F + Y + E N + I A D D N + Y I +F + + +G +SL +D E + + + A+D G P SN+ + V + D ND+ P F N+ GY + ++ A D D N + + + + P+ + D R ++IK
Sbjct: 419 SASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIG---------GNTQSQFSID-SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP----VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAV--DPRTGWVQTIK 750 HSP 5 Score: 110.923 bits (276), Expect = 6.359e-24 Identity = 136/606 (22.44%), Postives = 245/606 (40.43%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNL-IQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGV----IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVH---NNLGLIEANDEDLDE 2079
+S F+ + EN P+ +I ++A E + + S + R N + ++ TG + I +DREE + + + S + + D+ND P F + E ++ ED P G + A+D D E+ +I T F +S + + + + +D + +++ T+ A D+ G+ + +NI D N+ +P + PY +V ++ + + A D+D +N+++ + ++ + I+ L ++ + DGG L +TTD+ I + D NDNAP A I E+ + + D D+ +N L+D +++ S P G + NK DRE V + + I +DKGSP L+S+ + + + D ND+ P F + ENS S +G + A D D NA + YS+ + N + + G + T + D E + F ++ P R+ A I + V D ND P+ R +F ++ + N H +G I A D D+ +
Sbjct: 691 TSQFQESVLENVPVGYNIIRVQAY---DSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD-----------EDSRLHYEITTGNTRGRFAITSQNGRGL------ITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD--VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD------RDIEDGSFVID---PTSGTI-------RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE-STRKRFELVVRAASPPLRND-AHIEILVTDVNDNAPVLR---DFQVI--FNNFRDHFPSGEIGRIPAFDADVSD 1251 HSP 6 Score: 90.5077 bits (223), Expect = 9.995e-18 Identity = 84/324 (25.93%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 1654 DNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS----LDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPP---LSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGY---LLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ SP F +++Y ++E + + +V A D E++ + YS LD F ++ GV+ T DRE ++ F V+A+D+ P RS T ++ V VLD ND P F +Q+E +I E V + + + A D+D+ +N + Y I A + ++ F++ +++G +S +DRE + ++ V A D + + +V V + D ND+ P F S V + + G +A + A D D N ++ + ++G + S +I+ G V L +K + +S R+++RA D
Sbjct: 354 NQSPYFEQALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIRE---GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRID-SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL---VKPLDYESVRSYRLVIRAQD 663
BLAST of Protocadherin-1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214) HSP 1 Score: 180.259 bits (456), Expect = 4.113e-45 Identity = 172/659 (26.10%), Postives = 300/659 (45.52%), Query Frame = 1
Query: 394 AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIIS------FGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD--EIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
A R+ II GN + + ++ ++G + L+ +D E + + +VI + S +L +ID ND P F + + S+LE+VP+G+ I A D D +Y I +ER +D F + D +Q IK +DRE + +++F +VA D K ++V+ ++D+NDN P + Y+ V E + ++ A D D+ +S+L ++I T GN+R I + LI I +L E + ++ + D GG +T + I+I D N+ AP+ SA + E+ + +++ D D+ +N + + LN+ + L S++ P+ G ++ N DRE Y + + D G+P L+ + + V D NDN+P F +Y+ I+E+++ + + V+A D D N +IKY L +I + F I+ G I T + DRE ++++ T IA D G P SST + +++ D ND P F + + E N V + +G I A+D D N +V Y I + D+ ++ +L +D E + +++ R PPL N + + + D+ND+ PV
Sbjct: 617 AAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYR------LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI----------SER-DDNFPLAV--DPRTGWVQ----TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE----DSRLHYEITT---GNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSIN-----PQTGAIVT-------NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE---NSPVGSVVGEIHAHDPDEGVNAVVHYSI------IGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRF-ELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 166.007 bits (419), Expect = 9.418e-41 Identity = 183/757 (24.17%), Postives = 326/757 (43.06%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISG-NVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVII----SFG--SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-----TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE----CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER------PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYE--------IGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+L+ + E +P + + ++A+ P +++ + ++S + R ++L +++ TG + +S+DRE + D + ++ SF S L ++D ND PTF ++ E SI E +G + A+D D K Y IE + ++ F+ S + + +DRET + Y + A D +E + ++ + + D NDN PQ+ Y + V E T + ++A DAD N N+ + + I GN++ I +S + ++ + + +LV+ + DGG NTT L +++ D NDNAP + + EN + + D D N E TY S+S +++ P+ G V K DRE+ ++ ++ D G P ++S + V D NDN P F YE + E+ + + +V+A D D E++++ Y + GN F+I N G+I + D +Q+ + TV A+D+G RS TA++ + + D N+ PIF Y ++ E + V + ++ A D D+ N + Y +G+ P+ NP + G + +DRE S + V A+D G P LS++ V + + D+ND+ P F P + +I + G + ++ A D D LNG + + L
Sbjct: 362 ALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELM------DVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV--------ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGN--NAAIRYAIIG---GNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVI--RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEI-------TY---------SISERDDNFPLAVDPRTGWVQTI-------KPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI-TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFE---DAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-------------QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQA----SILEDALVGTSVIQVAASDPDVGLNGRIKYLL 1046 HSP 3 Score: 144.05 bits (362), Expect = 4.023e-34 Identity = 175/754 (23.21%), Postives = 319/754 (42.31%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVI--ISGNVRLRN-----LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG---------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIG---HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN--INSKLDFKIDTAKLG-NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-----IGNI-YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE 2472
FE ++E + S +I L+A K A+ + I ++ L + +++ +G + SS+DRE +D H+++ + + + ++D ND P F+++ + + ED G + + A+D D Y I + + F S+ + ++K +D E+ Y + A D + + +++N+ D NDN+P++ ++ +V E I ++A+D+D+ N I + + D L + R + A + +A+ V P ++ + I+++D NDN P + A + E++ +T +T D D + + +T R + RG++ I Q S D ++ + + + D G T++ ++ D N+ +PIF + Y + E++ + + VSA D D NA+I YSL+E +G+ FSIN G I T DRE S Y TV A D G PS S T + + V D ND P F+ Y+ +I+E + V ++ + A+D D+ NG + Y +++ D E F + T +G + +DRE + ++ IA D G PPLS+++ V + L D+ND P TF S +V +S G ++ ++ A D D +N V + ++G +
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI---------IGGNTQSQFSIDSMSG--------DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSA--------SSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNT----------RGRFAITSQNGRGLITIAQ-------SLDYKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILE---DALVGTSVIQVAASDPDVGLNGRIKY-------LLSDRDIEDGS-FVIDPT-SGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDKITLYVPENS--PVGSVVGEIHAHDPDEGVNAVVHYSIIGGD 1156 HSP 4 Score: 112.079 bits (279), Expect = 2.270e-24 Identity = 92/348 (26.44%), Postives = 151/348 (43.39%), Query Frame = 1
Query: 1534 NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-----------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPS---RSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK 2532
+ S DRE +D + ++ D P + + V VLD ND+SP F +E I E + S + ++ A D+D +NA+I+Y ++ + + I+ + GVI T+ DRE Y+ V A+D R++TAS+ VKVLD ND P F + Y + E N + I A D D N + Y I +F + + +G +SL +D E + + + A+D G P SN+ + V + D ND+ P F N+ GY + ++ A D D N + + + + P+ + D R ++IK
Sbjct: 419 SASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIG---------GNTQSQFSID-SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP----VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAV--DPRTGWVQTIK 750 HSP 5 Score: 110.923 bits (276), Expect = 6.359e-24 Identity = 136/606 (22.44%), Postives = 245/606 (40.43%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNL-IQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGV----IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVH---NNLGLIEANDEDLDE 2079
+S F+ + EN P+ +I ++A E + + S + R N + ++ TG + I +DREE + + + S + + D+ND P F + E ++ ED P G + A+D D E+ +I T F +S + + + + +D + +++ T+ A D+ G+ + +NI D N+ +P + PY +V ++ + + A D+D +N+++ + ++ + I+ L ++ + DGG L +TTD+ I + D NDNAP A I E+ + + D D+ +N L+D +++ S P G + NK DRE V + + I +DKGSP L+S+ + + + D ND+ P F + ENS S +G + A D D NA + YS+ + N + + G + T + D E + F ++ P R+ A I + V D ND P+ R +F ++ + N H +G I A D D+ +
Sbjct: 691 TSQFQESVLENVPVGYNIIRVQAY---DSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD-----------EDSRLHYEITTGNTRGRFAITSQNGRGL------ITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD--VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD------RDIEDGSFVID---PTSGTI-------RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE-STRKRFELVVRAASPPLRND-AHIEILVTDVNDNAPVLR---DFQVI--FNNFRDHFPSGEIGRIPAFDADVSD 1251 HSP 6 Score: 90.5077 bits (223), Expect = 9.995e-18 Identity = 84/324 (25.93%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 1654 DNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS----LDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPP---LSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGY---LLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ SP F +++Y ++E + + +V A D E++ + YS LD F ++ GV+ T DRE ++ F V+A+D+ P RS T ++ V VLD ND P F +Q+E +I E V + + + A D+D+ +N + Y I A + ++ F++ +++G +S +DRE + ++ V A D + + +V V + D ND+ P F S V + + G +A + A D D N ++ + ++G + S +I+ G V L +K + +S R+++RA D
Sbjct: 354 NQSPYFEQALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIRE---GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRID-SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL---VKPLDYESVRSYRLVIRAQD 663
BLAST of Protocadherin-1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0330601) HSP 1 Score: 179.874 bits (455), Expect = 4.738e-45 Identity = 172/659 (26.10%), Postives = 300/659 (45.52%), Query Frame = 1
Query: 394 AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIIS------FGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD--EIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
A R+ II GN + + ++ ++G + L+ +D E + + +VI + S +L +ID ND P F + + S+LE+VP+G+ I A D D +Y I +ER +D F + D +Q IK +DRE + +++F +VA D K ++V+ ++D+NDN P + Y+ V E + ++ A D D+ +S+L ++I T GN+R I + LI I +L E + ++ + D GG +T + I+I D N+ AP+ SA + E+ + +++ D D+ +N + + LN+ + L S++ P+ G ++ N DRE Y + + D G+P L+ + + V D NDN+P F +Y+ I+E+++ + + V+A D D N +IKY L +I + F I+ G I T + DRE ++++ T IA D G P SST + +++ D ND P F + + E N V + +G I A+D D N +V Y I + D+ ++ +L +D E + +++ R PPL N + + + D+ND+ PV
Sbjct: 617 AAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYR------LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI----------SER-DDNFPLAV--DPRTGWVQ----TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE----DSRLHYEITT---GNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSIN-----PQTGAIVT-------NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE---NSPVGSVVGEIHAHDPDEGVNAVVHYSI------IGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRF-ELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 166.007 bits (419), Expect = 1.004e-40 Identity = 183/757 (24.17%), Postives = 326/757 (43.06%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISG-NVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVII----SFG--SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-----TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE----CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER------PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYE--------IGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+L+ + E +P + + ++A+ P +++ + ++S + R ++L +++ TG + +S+DRE + D + ++ SF S L ++D ND PTF ++ E SI E +G + A+D D K Y IE + ++ F+ S + + +DRET + Y + A D +E + ++ + + D NDN PQ+ Y + V E T + ++A DAD N N+ + + I GN++ I +S + ++ + + +LV+ + DGG NTT L +++ D NDNAP + + EN + + D D N E TY S+S +++ P+ G V K DRE+ ++ ++ D G P ++S + V D NDN P F YE + E+ + + +V+A D D E++++ Y + GN F+I N G+I + D +Q+ + TV A+D+G RS TA++ + + D N+ PIF Y ++ E + V + ++ A D D+ N + Y +G+ P+ NP + G + +DRE S + V A+D G P LS++ V + + D+ND+ P F P + +I + G + ++ A D D LNG + + L
Sbjct: 362 ALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELM------DVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV--------ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGN--NAAIRYAIIG---GNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVI--RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEI-------TY---------SISERDDNFPLAVDPRTGWVQTI-------KPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI-TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFE---DAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-------------QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQA----SILEDALVGTSVIQVAASDPDVGLNGRIKYLL 1046 HSP 3 Score: 144.05 bits (362), Expect = 4.704e-34 Identity = 175/754 (23.21%), Postives = 319/754 (42.31%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVI--ISGNVRLRN-----LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG---------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIG---HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN--INSKLDFKIDTAKLG-NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-----IGNI-YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE 2472
FE ++E + S +I L+A K A+ + I ++ L + +++ +G + SS+DRE +D H+++ + + + ++D ND P F+++ + + ED G + + A+D D Y I + + F S+ + ++K +D E+ Y + A D + + +++N+ D NDN+P++ ++ +V E I ++A+D+D+ N I + + D L + R + A + +A+ V P ++ + I+++D NDN P + A + E++ +T +T D D + + +T R + RG++ I Q S D ++ + + + D G T++ ++ D N+ +PIF + Y + E++ + + VSA D D NA+I YSL+E +G+ FSIN G I T DRE S Y TV A D G PS S T + + V D ND P F+ Y+ +I+E + V ++ + A+D D+ NG + Y +++ D E F + T +G + +DRE + ++ IA D G PPLS+++ V + L D+ND P TF S +V +S G ++ ++ A D D +N V + ++G +
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI---------IGGNTQSQFSIDSMSG--------DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSA--------SSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNT----------RGRFAITSQNGRGLITIAQ-------SLDYKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILE---DALVGTSVIQVAASDPDVGLNGRIKY-------LLSDRDIEDGS-FVIDPT-SGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDKITLYVPENS--PVGSVVGEIHAHDPDEGVNAVVHYSIIGGD 1156 HSP 4 Score: 112.079 bits (279), Expect = 2.277e-24 Identity = 92/348 (26.44%), Postives = 151/348 (43.39%), Query Frame = 1
Query: 1534 NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-----------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPS---RSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK 2532
+ S DRE +D + ++ D P + + V VLD ND+SP F +E I E + S + ++ A D+D +NA+I+Y ++ + + I+ + GVI T+ DRE Y+ V A+D R++TAS+ VKVLD ND P F + Y + E N + I A D D N + Y I +F + + +G +SL +D E + + + A+D G P SN+ + V + D ND+ P F N+ GY + ++ A D D N + + + + P+ + D R ++IK
Sbjct: 419 SASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIG---------GNTQSQFSID-SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP----VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAV--DPRTGWVQTIK 750 HSP 5 Score: 110.923 bits (276), Expect = 6.378e-24 Identity = 136/606 (22.44%), Postives = 245/606 (40.43%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNL-IQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGV----IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVH---NNLGLIEANDEDLDE 2079
+S F+ + EN P+ +I ++A E + + S + R N + ++ TG + I +DREE + + + S + + D+ND P F + E ++ ED P G + A+D D E+ +I T F +S + + + + +D + +++ T+ A D+ G+ + +NI D N+ +P + PY +V ++ + + A D+D +N+++ + ++ + I+ L ++ + DGG L +TTD+ I + D NDNAP A I E+ + + D D+ +N L+D +++ S P G + NK DRE V + + I +DKGSP L+S+ + + + D ND+ P F + ENS S +G + A D D NA + YS+ + N + + G + T + D E + F ++ P R+ A I + V D ND P+ R +F ++ + N H +G I A D D+ +
Sbjct: 691 TSQFQESVLENVPVGYNIIRVQAY---DSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD-----------EDSRLHYEITTGNTRGRFAITSQNGRGL------ITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD--VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD------RDIEDGSFVID---PTSGTI-------RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE-STRKRFELVVRAASPPLRND-AHIEILVTDVNDNAPVLR---DFQVI--FNNFRDHFPSGEIGRIPAFDADVSD 1251 HSP 6 Score: 90.5077 bits (223), Expect = 1.010e-17 Identity = 84/324 (25.93%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 1654 DNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS----LDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPP---LSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGY---LLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ SP F +++Y ++E + + +V A D E++ + YS LD F ++ GV+ T DRE ++ F V+A+D+ P RS T ++ V VLD ND P F +Q+E +I E V + + + A D+D+ +N + Y I A + ++ F++ +++G +S +DRE + ++ V A D + + +V V + D ND+ P F S V + + G +A + A D D N ++ + ++G + S +I+ G V L +K + +S R+++RA D
Sbjct: 354 NQSPYFEQALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIRE---GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRID-SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL---VKPLDYESVRSYRLVIRAQD 663
BLAST of Protocadherin-1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463) HSP 1 Score: 179.874 bits (455), Expect = 5.098e-45 Identity = 172/659 (26.10%), Postives = 300/659 (45.52%), Query Frame = 1
Query: 394 AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIIS------FGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD--EIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
A R+ II GN + + ++ ++G + L+ +D E + + +VI + S +L +ID ND P F + + S+LE+VP+G+ I A D D +Y I +ER +D F + D +Q IK +DRE + +++F +VA D K ++V+ ++D+NDN P + Y+ V E + ++ A D D+ +S+L ++I T GN+R I + LI I +L E + ++ + D GG +T + I+I D N+ AP+ SA + E+ + +++ D D+ +N + + LN+ + L S++ P+ G ++ N DRE Y + + D G+P L+ + + V D NDN+P F +Y+ I+E+++ + + V+A D D N +IKY L +I + F I+ G I T + DRE ++++ T IA D G P SST + +++ D ND P F + + E N V + +G I A+D D N +V Y I + D+ ++ +L +D E + +++ R PPL N + + + D+ND+ PV
Sbjct: 617 AAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYR------LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI----------SER-DDNFPLAV--DPRTGWVQ----TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE----DSRLHYEITT---GNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSIN-----PQTGAIVT-------NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE---NSPVGSVVGEIHAHDPDEGVNAVVHYSI------IGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRF-ELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 165.622 bits (418), Expect = 1.207e-40 Identity = 183/757 (24.17%), Postives = 326/757 (43.06%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISG-NVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVII----SFG--SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-----TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE----CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER------PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYE--------IGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+L+ + E +P + + ++A+ P +++ + ++S + R ++L +++ TG + +S+DRE + D + ++ SF S L ++D ND PTF ++ E SI E +G + A+D D K Y IE + ++ F+ S + + +DRET + Y + A D +E + ++ + + D NDN PQ+ Y + V E T + ++A DAD N N+ + + I GN++ I +S + ++ + + +LV+ + DGG NTT L +++ D NDNAP + + EN + + D D N E TY S+S +++ P+ G V K DRE+ ++ ++ D G P ++S + V D NDN P F YE + E+ + + +V+A D D E++++ Y + GN F+I N G+I + D +Q+ + TV A+D+G RS TA++ + + D N+ PIF Y ++ E + V + ++ A D D+ N + Y +G+ P+ NP + G + +DRE S + V A+D G P LS++ V + + D+ND+ P F P + +I + G + ++ A D D LNG + + L
Sbjct: 362 ALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELM------DVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV--------ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGN--NAAIRYAIIG---GNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVI--RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEI-------TY---------SISERDDNFPLAVDPRTGWVQTI-------KPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI-TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFE---DAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-------------QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQA----SILEDALVGTSVIQVAASDPDVGLNGRIKYLL 1046 HSP 3 Score: 144.05 bits (362), Expect = 5.150e-34 Identity = 175/754 (23.21%), Postives = 319/754 (42.31%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVI--ISGNVRLRN-----LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG---------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIG---HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN--INSKLDFKIDTAKLG-NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-----IGNI-YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE 2472
FE ++E + S +I L+A K A+ + I ++ L + +++ +G + SS+DRE +D H+++ + + + ++D ND P F+++ + + ED G + + A+D D Y I + + F S+ + ++K +D E+ Y + A D + + +++N+ D NDN+P++ ++ +V E I ++A+D+D+ N I + + D L + R + A + +A+ V P ++ + I+++D NDN P + A + E++ +T +T D D + + +T R + RG++ I Q S D ++ + + + D G T++ ++ D N+ +PIF + Y + E++ + + VSA D D NA+I YSL+E +G+ FSIN G I T DRE S Y TV A D G PS S T + + V D ND P F+ Y+ +I+E + V ++ + A+D D+ NG + Y +++ D E F + T +G + +DRE + ++ IA D G PPLS+++ V + L D+ND P TF S +V +S G ++ ++ A D D +N V + ++G +
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI---------IGGNTQSQFSIDSMSG--------DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSA--------SSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNT----------RGRFAITSQNGRGLITIAQ-------SLDYKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILE---DALVGTSVIQVAASDPDVGLNGRIKY-------LLSDRDIEDGS-FVIDPT-SGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDKITLYVPENS--PVGSVVGEIHAHDPDEGVNAVVHYSIIGGD 1156 HSP 4 Score: 112.079 bits (279), Expect = 2.331e-24 Identity = 92/348 (26.44%), Postives = 151/348 (43.39%), Query Frame = 1
Query: 1534 NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-----------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPS---RSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK 2532
+ S DRE +D + ++ D P + + V VLD ND+SP F +E I E + S + ++ A D+D +NA+I+Y ++ + + I+ + GVI T+ DRE Y+ V A+D R++TAS+ VKVLD ND P F + Y + E N + I A D D N + Y I +F + + +G +SL +D E + + + A+D G P SN+ + V + D ND+ P F N+ GY + ++ A D D N + + + + P+ + D R ++IK
Sbjct: 419 SASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIG---------GNTQSQFSID-SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP----VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAV--DPRTGWVQTIK 750 HSP 5 Score: 110.538 bits (275), Expect = 7.410e-24 Identity = 136/606 (22.44%), Postives = 245/606 (40.43%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNL-IQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGV----IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVH---NNLGLIEANDEDLDE 2079
+S F+ + EN P+ +I ++A E + + S + R N + ++ TG + I +DREE + + + S + + D+ND P F + E ++ ED P G + A+D D E+ +I T F +S + + + + +D + +++ T+ A D+ G+ + +NI D N+ +P + PY +V ++ + + A D+D +N+++ + ++ + I+ L ++ + DGG L +TTD+ I + D NDNAP A I E+ + + D D+ +N L+D +++ S P G + NK DRE V + + I +DKGSP L+S+ + + + D ND+ P F + ENS S +G + A D D NA + YS+ + N + + G + T + D E + F ++ P R+ A I + V D ND P+ R +F ++ + N H +G I A D D+ +
Sbjct: 691 TSQFQESVLENVPVGYNIIRVQAY---DSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD-----------EDSRLHYEITTGNTRGRFAITSQNGRGL------ITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD--VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD------RDIEDGSFVID---PTSGTI-------RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE-STRKRFELVVRAASPPLRND-AHIEILVTDVNDNAPVLR---DFQVI--FNNFRDHFPSGEIGRIPAFDADVSD 1251 HSP 6 Score: 90.5077 bits (223), Expect = 1.052e-17 Identity = 84/324 (25.93%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 1654 DNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS----LDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPP---LSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGY---LLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ SP F +++Y ++E + + +V A D E++ + YS LD F ++ GV+ T DRE ++ F V+A+D+ P RS T ++ V VLD ND P F +Q+E +I E V + + + A D+D+ +N + Y I A + ++ F++ +++G +S +DRE + ++ V A D + + +V V + D ND+ P F S V + + G +A + A D D N ++ + ++G + S +I+ G V L +K + +S R+++RA D
Sbjct: 354 NQSPYFEQALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIRE---GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRID-SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL---VKPLDYESVRSYRLVIRAQD 663
BLAST of Protocadherin-1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899) HSP 1 Score: 179.874 bits (455), Expect = 5.174e-45 Identity = 172/659 (26.10%), Postives = 300/659 (45.52%), Query Frame = 1
Query: 394 AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIIS------FGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD--EIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
A R+ II GN + + ++ ++G + L+ +D E + + +VI + S +L +ID ND P F + + S+LE+VP+G+ I A D D +Y I +ER +D F + D +Q IK +DRE + +++F +VA D K ++V+ ++D+NDN P + Y+ V E + ++ A D D+ +S+L ++I T GN+R I + LI I +L E + ++ + D GG +T + I+I D N+ AP+ SA + E+ + +++ D D+ +N + + LN+ + L S++ P+ G ++ N DRE Y + + D G+P L+ + + V D NDN+P F +Y+ I+E+++ + + V+A D D N +IKY L +I + F I+ G I T + DRE ++++ T IA D G P SST + +++ D ND P F + + E N V + +G I A+D D N +V Y I + D+ ++ +L +D E + +++ R PPL N + + + D+ND+ PV
Sbjct: 617 AAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYR------LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI----------SER-DDNFPLAV--DPRTGWVQ----TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDE----DSRLHYEITT---GNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSIN-----PQTGAIVT-------NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE---NSPVGSVVGEIHAHDPDEGVNAVVHYSI------IGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRF-ELVVR-AASPPLRNDAHIEILVTDVNDNAPVL 1220 HSP 2 Score: 165.622 bits (418), Expect = 1.267e-40 Identity = 183/757 (24.17%), Postives = 326/757 (43.06%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISG-NVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVII----SFG--SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-----TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE----CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER------PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSI---NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYE--------IGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+L+ + E +P + + ++A+ P +++ + ++S + R ++L +++ TG + +S+DRE + D + ++ SF S L ++D ND PTF ++ E SI E +G + A+D D K Y IE + ++ F+ S + + +DRET + Y + A D +E + ++ + + D NDN PQ+ Y + V E T + ++A DAD N N+ + + I GN++ I +S + ++ + + +LV+ + DGG NTT L +++ D NDNAP + + EN + + D D N E TY S+S +++ P+ G V K DRE+ ++ ++ D G P ++S + V D NDN P F YE + E+ + + +V+A D D E++++ Y + GN F+I N G+I + D +Q+ + TV A+D+G RS TA++ + + D N+ PIF Y ++ E + V + ++ A D D+ N + Y +G+ P+ NP + G + +DRE S + V A+D G P LS++ V + + D+ND+ P F P + +I + G + ++ A D D LNG + + L
Sbjct: 362 ALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELM------DVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV--------ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGN--NAAIRYAIIG---GNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVI--RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEI-------TY---------SISERDDNFPLAVDPRTGWVQTI-------KPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI-TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFE---DAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-------------QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQA----SILEDALVGTSVIQVAASDPDVGLNGRIKYLL 1046 HSP 3 Score: 144.05 bits (362), Expect = 4.845e-34 Identity = 175/754 (23.21%), Postives = 319/754 (42.31%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVI--ISGNVRLRN-----LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG---------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIG---HVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN--INSKLDFKIDTAKLG-NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-----IGNI-YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE 2472
FE ++E + S +I L+A K A+ + I ++ L + +++ +G + SS+DRE +D H+++ + + + ++D ND P F+++ + + ED G + + A+D D Y I + + F S+ + ++K +D E+ Y + A D + + +++N+ D NDN+P++ ++ +V E I ++A+D+D+ N I + + D L + R + A + +A+ V P ++ + I+++D NDN P + A + E++ +T +T D D + + +T R + RG++ I Q S D ++ + + + D G T++ ++ D N+ +PIF + Y + E++ + + VSA D D NA+I YSL+E +G+ FSIN G I T DRE S Y TV A D G PS S T + + V D ND P F+ Y+ +I+E + V ++ + A+D D+ NG + Y +++ D E F + T +G + +DRE + ++ IA D G PPLS+++ V + L D+ND P TF S +V +S G ++ ++ A D D +N V + ++G +
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI---------IGGNTQSQFSIDSMSG--------DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSA--------SSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNT----------RGRFAITSQNGRGLITIAQ-------SLDYKQEKRFLLTVAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILE---DALVGTSVIQVAASDPDVGLNGRIKY-------LLSDRDIEDGS-FVIDPT-SGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDKITLYVPENS--PVGSVVGEIHAHDPDEGVNAVVHYSIIGGD 1156 HSP 4 Score: 112.079 bits (279), Expect = 2.598e-24 Identity = 92/348 (26.44%), Postives = 151/348 (43.39%), Query Frame = 1
Query: 1534 NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-----------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPS---RSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK 2532
+ S DRE +D + ++ D P + + V VLD ND+SP F +E I E + S + ++ A D+D +NA+I+Y ++ + + I+ + GVI T+ DRE Y+ V A+D R++TAS+ VKVLD ND P F + Y + E N + I A D D N + Y I +F + + +G +SL +D E + + + A+D G P SN+ + V + D ND+ P F N+ GY + ++ A D D N + + + + P+ + D R ++IK
Sbjct: 419 SASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIG---------GNTQSQFSID-SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP----VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAV--DPRTGWVQTIK 750 HSP 5 Score: 110.538 bits (275), Expect = 6.745e-24 Identity = 136/606 (22.44%), Postives = 245/606 (40.43%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNL-IQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGV----IFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVH---NNLGLIEANDEDLDE 2079
+S F+ + EN P+ +I ++A E + + S + R N + ++ TG + I +DREE + + + S + + D+ND P F + E ++ ED P G + A+D D E+ +I T F +S + + + + +D + +++ T+ A D+ G+ + +NI D N+ +P + PY +V ++ + + A D+D +N+++ + ++ + I+ L ++ + DGG L +TTD+ I + D NDNAP A I E+ + + D D+ +N L+D +++ S P G + NK DRE V + + I +DKGSP L+S+ + + + D ND+ P F + ENS S +G + A D D NA + YS+ + N + + G + T + D E + F ++ P R+ A I + V D ND P+ R +F ++ + N H +G I A D D+ +
Sbjct: 691 TSQFQESVLENVPVGYNIIRVQAY---DSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD-----------EDSRLHYEITTGNTRGRFAITSQNGRGL------ITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD--VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD------RDIEDGSFVID---PTSGTI-------RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE-STRKRFELVVRAASPPLRND-AHIEILVTDVNDNAPVLR---DFQVI--FNNFRDHFPSGEIGRIPAFDADVSD 1251 HSP 6 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 84/324 (25.93%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 1654 DNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS----LDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPP---LSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGY---LLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ SP F +++Y ++E + + +V A D E++ + YS LD F ++ GV+ T DRE ++ F V+A+D+ P RS T ++ V VLD ND P F +Q+E +I E V + + + A D+D+ +N + Y I A + ++ F++ +++G +S +DRE + ++ V A D + + +V V + D ND+ P F S V + + G +A + A D D N ++ + ++G + S +I+ G V L +K + +S R+++RA D
Sbjct: 354 NQSPYFEQALYVASVLEEQPAGAAVTTVRARDP---EDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIRE---GATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRID-SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF----SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL---VKPLDYESVRSYRLVIRAQD 663
BLAST of Protocadherin-1 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 223.402 bits (568), Expect = 4.343e-59 Identity = 198/706 (28.05%), Postives = 333/706 (47.17%), Query Frame = 1
Query: 556 GSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
G + E I+D ND P F+ + LSI E+ +G + +PVA+D DS GIA Y + ++T++ F +D + K+ PQL V+ +DRE R+ Y + +D + ++ + + I D NDN P++ Y+ + E + +KA D+D N ++ + + +S + + + +I ++G++ + ++ +K V K D G ++ +TI++KD NDNAP I I A I E+ + ++ V D D N +C + L+ T N+R ++ Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P+F+ ++YE E E + ++ V A D DS NA++ YS+ + F IN G + + DREQ Y F V A+D G PS TA+++VKVLD+ND P F Y F++ E NM + +G++ ND D EN V + PD K F +Q NG ++ I DRE++ST + A D G PP S+ + +T+ + D ND+ P T P+++S F++ + ET + ++AED D LN + F +VG I +G + L + + + R++V+ D+ Q+
Sbjct: 139 GPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNL--------FSLQVAQDSDEKL--PQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSD--MGPNGEVTYSLHQP---SSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAK--DNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASE----TGNDRKRK-----YFLQTT--TLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQE---NMPPLSPVGMVTVNDHDEGENARVQLSV--------EPDNGK---FMIQ---NGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPET--HVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGL---HRLVVKVKDKGTPPRQT 794 HSP 2 Score: 139.428 bits (350), Expect = 8.669e-33 Identity = 161/603 (26.70%), Postives = 255/603 (42.29%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKI-KENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I D ND VP F + E + E+ P+GH + A+D D G +Y + S+ +M + SI D II V +DRE F + A D + K + + +KD NDN+P + IGL ++ V + + + A D D+ N + + F++ +A + GN RK L ++ + + E + + + VD G L +T L + + D NDNAP+ S T + +EN+ ++L ++ D D N E TY + L N P G V + DRE++D Y L+ DKG P L + V VLD NDN P F + Y F + EN S +G V+ D D ENA+++ S++ + N I + FDRE++S Y+F + A D G+P RSS I + VLD+ND P K Y+F + V + +EA D D+ N + + I +P+ F+ I+ G+++L + + V +D G PP + V + +N+
Sbjct: 257 LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQ--PSSPVM--------RLLSI-DRNTGII----FVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLD------YERIKEYR--IEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVAT-DADSGTNAEL-------TYSITGGSVPEGLFEIN--PNTGEVRVM-------SQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVES----VEAEDIDIGLNSELDFNIVGGNPH---------GLFR--ISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNE 804 HSP 3 Score: 98.9821 bits (245), Expect = 2.470e-20 Identity = 136/585 (23.25%), Postives = 242/585 (41.37%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM--------KLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII----YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK---SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
S +E EL EN P+ ++ +KA + + + + + L+ ++ TG + + SVDREE+ Q KDN + +T + D ND P+ + I L +I ED+P+G + L SD D + + + + + D+ F+ + D + K L+ +D E ++Y +VA+D+ ++ + + D+NDN+P + Y++ +E ++ + A DAD + N++L + I + + G ++ M+++ + +V D G L+ T + + + D NDN P + S ++EN L + ++TV D D N + P G +I Y I + SFDREK YS + +D G P +S ++ VLDENDN+P TK S Y+F + + + + SV A D D N+++ +++ GN + F I+ G I ++F + L+ V D G P R +TA + + V
Sbjct: 274 SHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKAL------VTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVV-----AGDV---PFQLRSASETGNDRKRKYF---LQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDAD--SGTNAELTYSITGGSVPEG----------LFEINPNTGEVRVMSQLDREQLDHYQFLV--AAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSV---------------------EPDNGKFMIQNGTYTILS--TISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF-LDPRTSPETHVESVEAEDIDIGLNSELDFNIVG-GNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYV 802
BLAST of Protocadherin-1 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 222.631 bits (566), Expect = 5.249e-59 Identity = 198/706 (28.05%), Postives = 333/706 (47.17%), Query Frame = 1
Query: 556 GSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
G + E I+D ND P F+ + LSI E+ +G + +PVA+D DS GIA Y + ++T++ F +D + K+ PQL V+ +DRE R+ Y + +D + ++ + + I D NDN P++ Y+ + E + +KA D+D N ++ + + +S + + + +I ++G++ + ++ +K V K D G ++ +TI++KD NDNAP I I A I E+ + ++ V D D N +C + L+ T N+R ++ Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P+F+ ++YE E E + ++ V A D DS NA++ YS+ + F IN G + + DREQ Y F V A+D G PS TA+++VKVLD+ND P F Y F++ E NM + +G++ ND D EN V + PD K F +Q NG ++ I DRE++ST + A D G PP S+ + +T+ + D ND+ P T P+++S F++ + ET + ++AED D LN + F +VG I +G + L + + + R++V+ D+ Q+
Sbjct: 121 GPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNL--------FSLQVAQDSDEKL--PQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSD--MGPNGEVTYSLHQP---SSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAK--DNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASE----TGNDRKRK-----YFLQTT--TLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQE---NMPPLSPVGMVTVNDHDEGENARVQLSV--------EPDNGK---FMIQ---NGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETH--VESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGL---HRLVVKVKDKGTPPRQT 776 HSP 2 Score: 138.658 bits (348), Expect = 1.361e-32 Identity = 161/603 (26.70%), Postives = 255/603 (42.29%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKI-KENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I D ND VP F + E + E+ P+GH + A+D D G +Y + S+ +M + SI D II V +DRE F + A D + K + + +KD NDN+P + IGL ++ V + + + A D D+ N + + F++ +A + GN RK L ++ + + E + + + VD G L +T L + + D NDNAP+ S T + +EN+ ++L ++ D D N E TY + L N P G V + DRE++D Y L+ DKG P L + V VLD NDN P F + Y F + EN S +G V+ D D ENA+++ S++ + N I + FDRE++S Y+F + A D G+P RSS I + VLD+ND P K Y+F + V + +EA D D+ N + + I +P+ F+ I+ G+++L + + V +D G PP + V + +N+
Sbjct: 239 LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQ--PSSPVM--------RLLSI-DRNTGII----FVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLD------YERIKEYR--IEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVAT-DADSGTNAEL-------TYSITGGSVPEGLFEIN--PNTGEVRVM-------SQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVES----VEAEDIDIGLNSELDFNIVGGNPH---------GLFR--ISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNE 786 HSP 3 Score: 97.4413 bits (241), Expect = 6.462e-20 Identity = 136/585 (23.25%), Postives = 242/585 (41.37%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM--------KLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII----YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK---SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
S +E EL EN P+ ++ +KA + + + + + L+ ++ TG + + SVDREE+ Q KDN + +T + D ND P+ + I L +I ED+P+G + L SD D + + + + + D+ F+ + D + K L+ +D E ++Y +VA+D+ ++ + + D+NDN+P + Y++ +E ++ + A DAD + N++L + I + + G ++ M+++ + +V D G L+ T + + + D NDN P + S ++EN L + ++TV D D N + P G +I Y I + SFDREK YS + +D G P +S ++ VLDENDN+P TK S Y+F + + + + SV A D D N+++ +++ GN + F I+ G I ++F + L+ V D G P R +TA + + V
Sbjct: 256 SHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKAL------VTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVV-----AGDV---PFQLRSASETGNDRKRKYF---LQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDAD--SGTNAELTYSITGGSVPEG----------LFEINPNTGEVRVMSQLDREQLDHYQFLV--AAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSV---------------------EPDNGKFMIQNGTYTILS--TISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF-LDPRTSPETHVESVEAEDIDIGLNSELDFNIVG-GNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYV 784
BLAST of Protocadherin-1 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 222.631 bits (566), Expect = 5.564e-59 Identity = 198/706 (28.05%), Postives = 334/706 (47.31%), Query Frame = 1
Query: 556 GSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
G + E I+D ND P F+ + LSI E+ +G + +PVA+D DS GIA Y + ++T++ F +D + K+ PQL V+ +DRE R+ Y + +D + ++ + + I D NDN P++ Y+ + E + +KA D+D N ++ + + +S + + + +I ++G++ + ++ +K V K D G ++ +TI++KD NDNAP I I A I E+ + ++ V D D N +C + L+ + T N+R ++ Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P+F+ ++YE E E + ++ V A D DS NA++ YS+ + F IN G + + DREQ Y F V A+D G PS TA+++VKVLD+ND P F Y F++ E NM + +G++ ND D EN V + PD K F +Q NG ++ I DRE++ST + A D G PP S+ + +T+ + D ND+ P T P+++S F++ + ET + ++AED D LN + F +VG I +G + L + + + R++V+ D+ Q+
Sbjct: 140 GPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNL--------FSLQVAQDSDEKL--PQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSD--MGPNGEVTYSLHQP---SSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAK--DNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRS----ASETGNDRKRK-----YFLQTT--TLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQE---NMPPLSPVGMVTVNDHDEGENARVQLSV--------EPDNGK---FMIQ---NGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETH--VESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGL---HRLVVKVKDKGTPPRQT 795 HSP 2 Score: 138.658 bits (348), Expect = 1.215e-32 Identity = 161/603 (26.70%), Postives = 255/603 (42.29%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKI-KENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I D ND VP F + E + E+ P+GH + A+D D G +Y + S+ +M + SI D II V +DRE F + A D + K + + +KD NDN+P + IGL ++ V + + + A D D+ N + + F++ +A + GN RK L ++ + + E + + + VD G L +T L + + D NDNAP+ S T + +EN+ ++L ++ D D N E TY + L N P G V + DRE++D Y L+ DKG P L + V VLD NDN P F + Y F + EN S +G V+ D D ENA+++ S++ + N I + FDRE++S Y+F + A D G+P RSS I + VLD+ND P K Y+F + V + +EA D D+ N + + I +P+ F+ I+ G+++L + + V +D G PP + V + +N+
Sbjct: 258 LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQ--PSSPVM--------RLLSI-DRNTGII----FVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLD------YERIKEYR--IEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVAT-DADSGTNAEL-------TYSITGGSVPEGLFEIN--PNTGEVRVM-------SQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVES----VEAEDIDIGLNSELDFNIVGGNPH---------GLFR--ISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNE 805 HSP 3 Score: 97.0561 bits (240), Expect = 8.361e-20 Identity = 136/585 (23.25%), Postives = 242/585 (41.37%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM--------KLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII----YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK---SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
S +E EL EN P+ ++ +KA + + + + + L+ ++ TG + + SVDREE+ Q KDN + +T + D ND P+ + I L +I ED+P+G + L SD D + + + + + D+ F+ + D + K L+ +D E ++Y +VA+D+ ++ + + D+NDN+P + Y++ +E ++ + A DAD + N++L + I + + G ++ M+++ + +V D G L+ T + + + D NDN P + S ++EN L + ++TV D D N + P G +I Y I + SFDREK YS + +D G P +S ++ VLDENDN+P TK S Y+F + + + + SV A D D N+++ +++ GN + F I+ G I ++F + L+ V D G P R +TA + + V
Sbjct: 275 SHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKAL------VTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVV-----AGDV---PFQLRSASETGNDRKRKYF---LQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDAD--SGTNAELTYSITGGSVPEG----------LFEINPNTGEVRVMSQLDREQLDHYQFLV--AAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSV---------------------EPDNGKFMIQNGTYTILS--TISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF-LDPRTSPETHVESVEAEDIDIGLNSELDFNIVG-GNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYV 803
BLAST of Protocadherin-1 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 222.631 bits (566), Expect = 6.010e-59 Identity = 198/706 (28.05%), Postives = 334/706 (47.31%), Query Frame = 1
Query: 556 GSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
G + E I+D ND P F+ + LSI E+ +G + +PVA+D DS GIA Y + ++T++ F +D + K+ PQL V+ +DRE R+ Y + +D + ++ + + I D NDN P++ Y+ + E + +KA D+D N ++ + + +S + + + +I ++G++ + ++ +K V K D G ++ +TI++KD NDNAP I I A I E+ + ++ V D D N +C + L+ + T N+R ++ Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P+F+ ++YE E E + ++ V A D DS NA++ YS+ + F IN G + + DREQ Y F V A+D G PS TA+++VKVLD+ND P F Y F++ E NM + +G++ ND D EN V + PD K F +Q NG ++ I DRE++ST + A D G PP S+ + +T+ + D ND+ P T P+++S F++ + ET + ++AED D LN + F +VG I +G + L + + + R++V+ D+ Q+
Sbjct: 134 GPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNL--------FSLQVAQDSDEKL--PQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSD--MGPNGEVTYSLHQP---SSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAK--DNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRS----ASETGNDRKRK-----YFLQTT--TLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQE---NMPPLSPVGMVTVNDHDEGENARVQLSV--------EPDNGK---FMIQ---NGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETH--VESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGL---HRLVVKVKDKGTPPRQT 789 HSP 2 Score: 138.658 bits (348), Expect = 1.261e-32 Identity = 159/602 (26.41%), Postives = 251/602 (41.69%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I D ND VP F + E + E+ P+GH + A+D D G +Y + S+ +M + SI D II V +DRE F + A D + K + + +KD NDN+P + IGL ++ V + + + A D D+ N + + F++ +A + GN RK L ++ + + E + + + VD G L +T L + + D NDNAP+ S T + E + + + + D D N E TY + L N P G V + DRE++D Y L+ DKG P L + V VLD NDN P F + Y F + EN S +G V+ D D ENA+++ S++ + N I + FDRE++S Y+F + A D G+P RSS I + VLD+ND P K Y+F + V + +EA D D+ N + + I +P+ F+ I+ G+++L + + V +D G PP + V + +N+
Sbjct: 252 LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQ--PSSPVM--------RLLSI-DRNTGII----FVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLD------YERIKEYR--IEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAEL-------TYSITGGSVPEGLFEIN--PNTGEVRVM-------SQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVES----VEAEDIDIGLNSELDFNIVGGNPH---------GLFR--ISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNE 799 HSP 3 Score: 97.4413 bits (241), Expect = 7.620e-20 Identity = 136/585 (23.25%), Postives = 242/585 (41.37%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM--------KLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII----YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK---SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
S +E EL EN P+ ++ +KA + + + + + L+ ++ TG + + SVDREE+ Q KDN + +T + D ND P+ + I L +I ED+P+G + L SD D + + + + + D+ F+ + D + K L+ +D E ++Y +VA+D+ ++ + + D+NDN+P + Y++ +E ++ + A DAD + N++L + I + + G ++ M+++ + +V D G L+ T + + + D NDN P + S ++EN L + ++TV D D N + P G +I Y I + SFDREK YS + +D G P +S ++ VLDENDN+P TK S Y+F + + + + SV A D D N+++ +++ GN + F I+ G I ++F + L+ V D G P R +TA + + V
Sbjct: 269 SHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKAL------VTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVV-----AGDV---PFQLRSASETGNDRKRKYF---LQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDAD--SGTNAELTYSITGGSVPEG----------LFEINPNTGEVRVMSQLDREQLDHYQFLV--AAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSV---------------------EPDNGKFMIQNGTYTILS--TISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF-LDPRTSPETHVESVEAEDIDIGLNSELDFNIVG-GNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYV 797
BLAST of Protocadherin-1 vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 223.016 bits (567), Expect = 6.022e-59 Identity = 198/706 (28.05%), Postives = 333/706 (47.17%), Query Frame = 1
Query: 556 GSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
G + E I+D ND P F+ + LSI E+ +G + +PVA+D DS GIA Y + ++T++ F +D + K+ PQL V+ +DRE R+ Y + +D + ++ + + I D NDN P++ Y+ + E + +KA D+D N ++ + + +S + + + +I ++G++ + ++ +K V K D G ++ +TI++KD NDNAP I I A I E+ + ++ V D D N +C + L+ T N+R ++ Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P+F+ ++YE E E + ++ V A D DS NA++ YS+ + F IN G + + DREQ Y F V A+D G PS TA+++VKVLD+ND P F Y F++ E NM + +G++ ND D EN V + PD K F +Q NG ++ I DRE++ST + A D G PP S+ + +T+ + D ND+ P T P+++S F++ + ET + ++AED D LN + F +VG I +G + L + + + R++V+ D+ Q+
Sbjct: 144 GPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNL--------FSLQVAQDSDEKL--PQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSD--MGPNGEVTYSLHQP---SSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAK--DNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASE----TGNDRKRK-----YFLQTT--TLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQE---NMPPLSPVGMVTVNDHDEGENARVQLSV--------EPDNGK---FMIQ---NGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPET--HVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGL---HRLVVKVKDKGTPPRQT 799 HSP 2 Score: 139.428 bits (350), Expect = 8.872e-33 Identity = 158/602 (26.25%), Postives = 250/602 (41.53%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I D ND VP F + E + E+ P+GH + A+D D G +Y + S+ +M + SI D II V +DRE F + A D + K + + +KD NDN+P + IGL ++ V + + + A D D+ N + + F++ +A + GN RK L ++ + + E + + + VD G L +T L + + D NDNAP+ S T + E + + + + D D N E TY + L N P G V + DRE++D Y L+ DKG P L + V VLD NDN P F + Y F + EN S +G V+ D D ENA+++ S++ + N I + FDRE++S Y+F + A D G+P RSS I + VLD+ND P K Y+F + V + +EA D D+ N + + I +P+ +I+ G+++L + + V +D G PP + V + +N+
Sbjct: 262 LRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQ--PSSPVM--------RLLSI-DRNTGII----FVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLD------YERIKEYR--IEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAEL-------TYSITGGSVPEGLFEIN--PNTGEVRVM-------SQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVES----VEAEDIDIGLNSELDFNIVGGNPH-----------GLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNE 809 HSP 3 Score: 98.5969 bits (244), Expect = 2.815e-20 Identity = 136/585 (23.25%), Postives = 242/585 (41.37%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM--------KLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII----YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK---SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
S +E EL EN P+ ++ +KA + + + + + L+ ++ TG + + SVDREE+ Q KDN + +T + D ND P+ + I L +I ED+P+G + L SD D + + + + + D+ F+ + D + K L+ +D E ++Y +VA+D+ ++ + + D+NDN+P + Y++ +E ++ + A DAD + N++L + I + + G ++ M+++ + +V D G L+ T + + + D NDN P + S ++EN L + ++TV D D N + P G +I Y I + SFDREK YS + +D G P +S ++ VLDENDN+P TK S Y+F + + + + SV A D D N+++ +++ GN + F I+ G I ++F + L+ V D G P R +TA + + V
Sbjct: 279 SHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKAL------VTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVV-----AGDV---PFQLRSASETGNDRKRKYF---LQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDAD--SGTNAELTYSITGGSVPEG----------LFEINPNTGEVRVMSQLDREQLDHYQFLV--AAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSV---------------------EPDNGKFMIQNGTYTILS--TISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF-LDPRTSPETHVESVEAEDIDIGLNSELDFNIVG-GNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYV 807
BLAST of Protocadherin-1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 239.195 bits (609), Expect = 4.018e-64 Identity = 218/784 (27.81%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 382 AFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQ--QKDNDC------SHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYY 2640
+ ++KH + + G+ LR ++ TG ++ +S+DRE L CQ + C S ++S + + I+D+ND P F I LSI E+ IG + +P A+D DS G++SY++ I+ +D F +D + K QPQL V+ +DRE R+ Y T+ D T + + ++I D NDN+P++ + Y+ + E + +KA D+D +N+++D+ A R+L + + + + + +K V K D G T T +TI+I+D NDN P+I I A I E+ + ++ V D D +N +C + LK+V +K + Y ++T + D E V Y++ I+ +D G+P L+S+ V V D NDN+P+F++S+ E EN+ + + VSA D DS N+++ YS+ D FSIN G I DREQ+ Y+F V+A D G PS TAS+++ VLD+ND P F Y F+++E NM + +G++ D D EN + + ++ F +Q NG ++ I DRE QST + A D G PP S+ + VT+ + D ND+ PV PS+ S + ++ + G + + AED D +N + + + I +G V L+++I + + + R++V+ +D+ + S G+ ++ +Y
Sbjct: 91 GYPDSKHLYKLELGHPYLR----VDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYEL--------IVGPEAQDLFGLQVAEDQDEK--QPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSD--QGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAK--DKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKK---------YFLQTT--TALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVME---NMPRLSPVGMVTVIDADKGENAHIHLSV-----------EPESGEFVIQ---NGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKY--LTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGL---HRLVVKVTDKGK---PSRHGTALVHFY 819 HSP 2 Score: 145.206 bits (365), Expect = 1.693e-34 Identity = 152/600 (25.33%), Postives = 248/600 (41.33%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGL-PYKITV----KECTTSREIFSLKAFDADDQNN------INSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNN--LGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I+D ND P F K E + E+ P+GH + A+D D G+ + +I+ F R + + + + V IDRE F++VA D K + + I+D NDN P + GL ++ V ++ + ++ D D+ N + + F++ + G+ K L ++ AL + + + + VD G L +T L + + D NDNAP+ S + EN +++ ++ D D N + Y L + +R + + N P G + + N DRE+ + Y ++ +DKG P L + + VLD NDN P F + Y F +MEN S +G V+ D D ENA I S++ + N G I + FDRE +S Y F + A D G+P RSS + + VLD+ND P+ NI Y H + + A D D N + Y I + +P+ + F++ NG+++L I R+ + V D GKP + V +N+
Sbjct: 274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQ---GVNA-EIDYSFHQASDTVRRLLHLDRSTGL-----------ITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTT--------ALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLH-------YSILPDPSARGIFSIN--PDSGQIRV-------NTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVI--VVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPF---------ELFQIS-HNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINE 822
BLAST of Protocadherin-1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 240.35 bits (612), Expect = 4.214e-64 Identity = 215/782 (27.49%), Postives = 366/782 (46.80%), Query Frame = 1
Query: 382 AFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQ--QKDNDC------SHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYY 2640
+ ++KH + + G+ LR ++ TG ++ +S+DRE L CQ + C S ++S + + I+D+ND P F I LSI E+ IG + +P A+D DS G++SY++ I+ +D F +D + K QPQL V+ +DRE R+ Y T+ D T + + ++I D NDN+P++ + Y+ + E + +KA D+D +N+++D+ A R+L + + + + + +K V K T +TI+I+D NDN P+I I A I E+ + ++ V D D +N +C + LK+V +K + Y ++T + D E V Y++ I+ +D G+P L+S+ V V D NDN+P+F++S+ E EN+ + + VSA D DS N+++ YS+ D FSIN G I DREQ+ Y+F V+A D G PS TAS+++ VLD+ND P F Y F+++E NM + +G++ D D EN + + ++ F +Q NG ++ I DRE QST + A D G PP S+ + VT+ + D ND+ PV PS+ S + ++ + G + + AED D +N + + + I +G V L+++I + + + R++V+ +D+ + S G+ ++ +Y
Sbjct: 83 GYPDSKHLYKLELGHPYLR----VDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYEL--------IVGPEAQDLFGLQVAEDQDEK--QPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSD--QGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKK---------YFLQTT--TALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVME---NMPRLSPVGMVTVIDADKGENAHIHLSV-----------EPESGEFVIQ---NGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKY--LTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGL---HRLVVKVTDKGK---PSRHGTALVHFY 811 HSP 2 Score: 146.362 bits (368), Expect = 1.093e-34 Identity = 152/600 (25.33%), Postives = 248/600 (41.33%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGL-PYKITV----KECTTSREIFSLKAFDADDQNN------INSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNN--LGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I+D ND P F K E + E+ P+GH + A+D D G+ + +I+ F R + + + + V IDRE F++VA D K + + I+D NDN P + GL ++ V ++ + ++ D D+ N + + F++ + G+ K L ++ AL + + + + VD G L +T L + + D NDNAP+ S + EN +++ ++ D D N + Y L + +R + + N P G + + N DRE+ + Y ++ +DKG P L + + VLD NDN P F + Y F +MEN S +G V+ D D ENA I S++ + N G I + FDRE +S Y F + A D G+P RSS + + VLD+ND P+ NI Y H + + A D D N + Y I + +P+ + F++ NG+++L I R+ + V D GKP + V +N+
Sbjct: 266 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQ---GVNA-EIDYSFHQASDTVRRLLHLDRSTGL-----------ITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTT--------ALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLH-------YSILPDPSARGIFSIN--PDSGQIRV-------NTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVI--VVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPF---------ELFQIS-HNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINE 814
BLAST of Protocadherin-1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 239.965 bits (611), Expect = 6.062e-64 Identity = 215/782 (27.49%), Postives = 366/782 (46.80%), Query Frame = 1
Query: 382 AFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQ--QKDNDC------SHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYY 2640
+ ++KH + + G+ LR ++ TG ++ +S+DRE L CQ + C S ++S + + I+D+ND P F I LSI E+ IG + +P A+D DS G++SY++ I+ +D F +D + K QPQL V+ +DRE R+ Y T+ D T + + ++I D NDN+P++ + Y+ + E + +KA D+D +N+++D+ A R+L + + + + + +K V K T +TI+I+D NDN P+I I A I E+ + ++ V D D +N +C + LK+V +K + Y ++T + D E V Y++ I+ +D G+P L+S+ V V D NDN+P+F++S+ E EN+ + + VSA D DS N+++ YS+ D FSIN G I DREQ+ Y+F V+A D G PS TAS+++ VLD+ND P F Y F+++E NM + +G++ D D EN + + ++ F +Q NG ++ I DRE QST + A D G PP S+ + VT+ + D ND+ PV PS+ S + ++ + G + + AED D +N + + + I +G V L+++I + + + R++V+ +D+ + S G+ ++ +Y
Sbjct: 91 GYPDSKHLYKLELGHPYLR----VDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYEL--------IVGPEAQDLFGLQVAEDQDEK--QPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSD--QGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKK---------YFLQTT--TALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVME---NMPRLSPVGMVTVIDADKGENAHIHLSV-----------EPESGEFVIQ---NGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKY--LTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGL---HRLVVKVTDKGK---PSRHGTALVHFY 819 HSP 2 Score: 145.976 bits (367), Expect = 1.496e-34 Identity = 152/600 (25.33%), Postives = 248/600 (41.33%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGL-PYKITV----KECTTSREIFSLKAFDADDQNN------INSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNN--LGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I+D ND P F K E + E+ P+GH + A+D D G+ + +I+ F R + + + + V IDRE F++VA D K + + I+D NDN P + GL ++ V ++ + ++ D D+ N + + F++ + G+ K L ++ AL + + + + VD G L +T L + + D NDNAP+ S + EN +++ ++ D D N + Y L + +R + + N P G + + N DRE+ + Y ++ +DKG P L + + VLD NDN P F + Y F +MEN S +G V+ D D ENA I S++ + N G I + FDRE +S Y F + A D G+P RSS + + VLD+ND P+ NI Y H + + A D D N + Y I + +P+ + F++ NG+++L I R+ + V D GKP + V +N+
Sbjct: 274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQ---GVNA-EIDYSFHQASDTVRRLLHLDRSTGL-----------ITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTT--------ALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLH-------YSILPDPSARGIFSIN--PDSGQIRV-------NTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVI--VVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPF---------ELFQIS-HNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINE 822
BLAST of Protocadherin-1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 239.195 bits (609), Expect = 6.525e-64 Identity = 218/784 (27.81%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 382 AFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQ--QKDNDC------SHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYY 2640
+ ++KH + + G+ LR ++ TG ++ +S+DRE L CQ + C S ++S + + I+D+ND P F I LSI E+ IG + +P A+D DS G++SY++ I+ +D F +D + K QPQL V+ +DRE R+ Y T+ D T + + ++I D NDN+P++ + Y+ + E + +KA D+D +N+++D+ A R+L + + + + + +K V K D G T T +TI+I+D NDN P+I I A I E+ + ++ V D D +N +C + LK+V +K + Y ++T + D E V Y++ I+ +D G+P L+S+ V V D NDN+P+F++S+ E EN+ + + VSA D DS N+++ YS+ D FSIN G I DREQ+ Y+F V+A D G PS TAS+++ VLD+ND P F Y F+++E NM + +G++ D D EN + + ++ F +Q NG ++ I DRE QST + A D G PP S+ + VT+ + D ND+ PV PS+ S + ++ + G + + AED D +N + + + I +G V L+++I + + + R++V+ +D+ + S G+ ++ +Y
Sbjct: 91 GYPDSKHLYKLELGHPYLR----VDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYEL--------IVGPEAQDLFGLQVAEDQDEK--QPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSD--QGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAK--DKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKK---------YFLQTT--TALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVME---NMPRLSPVGMVTVIDADKGENAHIHLSV-----------EPESGEFVIQ---NGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKY--LTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGL---HRLVVKVTDKGK---PSRHGTALVHFY 819 HSP 2 Score: 145.591 bits (366), Expect = 1.606e-34 Identity = 152/600 (25.33%), Postives = 248/600 (41.33%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGL-PYKITV----KECTTSREIFSLKAFDADDQNN------INSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNN--LGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I+D ND P F K E + E+ P+GH + A+D D G+ + +I+ F R + + + + V IDRE F++VA D K + + I+D NDN P + GL ++ V ++ + ++ D D+ N + + F++ + G+ K L ++ AL + + + + VD G L +T L + + D NDNAP+ S + EN +++ ++ D D N + Y L + +R + + N P G + + N DRE+ + Y ++ +DKG P L + + VLD NDN P F + Y F +MEN S +G V+ D D ENA I S++ + N G I + FDRE +S Y F + A D G+P RSS + + VLD+ND P+ NI Y H + + A D D N + Y I + +P+ + F++ NG+++L I R+ + V D GKP + V +N+
Sbjct: 274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQ---GVNA-EIDYSFHQASDTVRRLLHLDRSTGL-----------ITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTT--------ALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLH-------YSILPDPSARGIFSIN--PDSGQIRV-------NTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVI--VVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPF---------ELFQIS-HNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINE 822
BLAST of Protocadherin-1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 238.039 bits (606), Expect = 9.757e-64 Identity = 218/784 (27.81%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 382 AFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQ--QKDNDC------SHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYY 2640
+ ++KH + + G+ LR ++ TG ++ +S+DRE L CQ + C S ++S + + I+D+ND P F I LSI E+ IG + +P A+D DS G++SY++ I+ +D F +D + K QPQL V+ +DRE R+ Y T+ D T + + ++I D NDN+P++ + Y+ + E + +KA D+D +N+++D+ A R+L + + + + + +K V K D G T T +TI+I+D NDN P+I I A I E+ + ++ V D D +N +C + LK+V +K + Y ++T + D E V Y++ I+ +D G+P L+S+ V V D NDN+P+F++S+ E EN+ + + VSA D DS N+++ YS+ D FSIN G I DREQ+ Y+F V+A D G PS TAS+++ VLD+ND P F Y F+++E NM + +G++ D D EN + + ++ F +Q NG ++ I DRE QST + A D G PP S+ + VT+ + D ND+ PV PS+ S + ++ + G + + AED D +N + + + I +G V L+++I + + + R++V+ +D+ + S G+ ++ +Y
Sbjct: 91 GYPDSKHLYKLELGHPYLR----VDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYEL--------IVGPEAQDLFGLQVAEDQDEK--QPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSD--QGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAK--DKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKK---------YFLQTT--TALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVME---NMPRLSPVGMVTVIDADKGENAHIHLSV-----------EPESGEFVIQ---NGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKY--LTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGL---HRLVVKVTDKGK---PSRHGTALVHFY 819 HSP 2 Score: 144.821 bits (364), Expect = 2.323e-34 Identity = 152/600 (25.33%), Postives = 248/600 (41.33%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGL-PYKITV----KECTTSREIFSLKAFDADDQNN------INSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNN--LGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L I+D ND P F K E + E+ P+GH + A+D D G+ + +I+ F R + + + + V IDRE F++VA D K + + I+D NDN P + GL ++ V ++ + ++ D D+ N + + F++ + G+ K L ++ AL + + + + VD G L +T L + + D NDNAP+ S + EN +++ ++ D D N + Y L + +R + + N P G + + N DRE+ + Y ++ +DKG P L + + VLD NDN P F + Y F +MEN S +G V+ D D ENA I S++ + N G I + FDRE +S Y F + A D G+P RSS + + VLD+ND P+ NI Y H + + A D D N + Y I + +P+ + F++ NG+++L I R+ + V D GKP + V +N+
Sbjct: 274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQ---GVNA-EIDYSFHQASDTVRRLLHLDRSTGL-----------ITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTT--------ALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLH-------YSILPDPSARGIFSIN--PDSGQIRV-------NTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVI--VVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPF---------ELFQIS-HNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINE 822
BLAST of Protocadherin-1 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 233.417 bits (594), Expect = 2.261e-62 Identity = 205/731 (28.04%), Postives = 337/731 (46.10%), Query Frame = 1
Query: 484 SSVDREEL--CQQK--DNDC------SHIVIISFGS-FIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
+S+DRE L CQ + N C S ++ GS + E + D+ND P FA I L+I E+ IG + +P+A+D D+ G+ASY+++ ++ ++ F +D E K QPQL V+ +DRE + Y T+ D + +L + D NDN+P++ Y+ + E + +KA D+D N+++D+ A R+L R+ + + + ++ ++ V K + +++KD NDNAP I I A I E+ + ++ V D D N +C + L++ +K + Y ++T D EKV Y++ I+ +D G+P L+S+ V V+D NDN+P+FT+SI E EN+ + V+A D DS NA++ YSL + F+I+ G I K DREQ+ Y V+A+D G PS TA++LV VLD ND P F Y F+++E NM + +G++ D D EN V + + F +Q NG ++ + DRE+QST + A D G PP S + VT+ + D ND+ P T PS+ S ++ + G ++++ AED D +N + + + G I G + L++ I+ R H + R++V+ SD+
Sbjct: 91 TSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEA--------QELFGLQVAEDQEEK--QPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSD--QGANAEIDYTFHQAPE-VVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKK---------YFLQTT--TPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVME---NMPALSPVGMVTVIDGDKGENARVQLSV-----------EQDNGDFVIQ---NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRL--LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGL---HRLVVKVSDR 775 HSP 2 Score: 159.073 bits (401), Expect = 7.156e-39 Identity = 156/602 (25.91%), Postives = 253/602 (42.03%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGLPYK----ITVKECTTSREIFSL-KAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG--LIEANDEDLDE--NGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++D ND P F + E + E+ PIGH + A+D D A+ +I+ F + R + + + + V +DRE F+++A D K +V+ +KD+NDN+P + IGL + E +L + D D+ N + + F++ A + G+ K L ++ L + + VD G L +T L + + D NDNAP+ + + EN + E++ +T D D N E L E ++ L T + P+ G + + S DRE+ D Y + ++ D+GSP L + V VLD NDN P F S Y F +MEN S +G V+ D D ENA+++ S+++ + N G I + FDREQ+S Y F + A D G P RS+ + + VLD+ND P S+ + LG + + ED+D N + Y I +PY F++ + +G ++L I+R + V D GKPP + V + +N+
Sbjct: 244 LRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQG----ANAEIDYTFHQAPEVVRRLLRLDRNTGL-----------ITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--------PLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLE-------PEPAAQGLFTIS--PENGEIRV-------KTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN----TSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPY---------GLFQIG-SHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNE 792
BLAST of Protocadherin-1 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 233.417 bits (594), Expect = 2.261e-62 Identity = 205/731 (28.04%), Postives = 337/731 (46.10%), Query Frame = 1
Query: 484 SSVDREEL--CQQK--DNDC------SHIVIISFGS-FIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
+S+DRE L CQ + N C S ++ GS + E + D+ND P FA I L+I E+ IG + +P+A+D D+ G+ASY+++ ++ ++ F +D E K QPQL V+ +DRE + Y T+ D + +L + D NDN+P++ Y+ + E + +KA D+D N+++D+ A R+L R+ + + + ++ ++ V K + +++KD NDNAP I I A I E+ + ++ V D D N +C + L++ +K + Y ++T D EKV Y++ I+ +D G+P L+S+ V V+D NDN+P+FT+SI E EN+ + V+A D DS NA++ YSL + F+I+ G I K DREQ+ Y V+A+D G PS TA++LV VLD ND P F Y F+++E NM + +G++ D D EN V + + F +Q NG ++ + DRE+QST + A D G PP S + VT+ + D ND+ P T PS+ S ++ + G ++++ AED D +N + + + G I G + L++ I+ R H + R++V+ SD+
Sbjct: 91 TSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEA--------QELFGLQVAEDQEEK--QPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSD--QGANAEIDYTFHQAPE-VVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKK---------YFLQTT--TPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVME---NMPALSPVGMVTVIDGDKGENARVQLSV-----------EQDNGDFVIQ---NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRL--LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGL---HRLVVKVSDR 775 HSP 2 Score: 159.073 bits (401), Expect = 7.156e-39 Identity = 156/602 (25.91%), Postives = 253/602 (42.03%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGLPYK----ITVKECTTSREIFSL-KAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG--LIEANDEDLDE--NGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++D ND P F + E + E+ PIGH + A+D D A+ +I+ F + R + + + + V +DRE F+++A D K +V+ +KD+NDN+P + IGL + E +L + D D+ N + + F++ A + G+ K L ++ L + + VD G L +T L + + D NDNAP+ + + EN + E++ +T D D N E L E ++ L T + P+ G + + S DRE+ D Y + ++ D+GSP L + V VLD NDN P F S Y F +MEN S +G V+ D D ENA+++ S+++ + N G I + FDREQ+S Y F + A D G P RS+ + + VLD+ND P S+ + LG + + ED+D N + Y I +PY F++ + +G ++L I+R + V D GKPP + V + +N+
Sbjct: 244 LRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQG----ANAEIDYTFHQAPEVVRRLLRLDRNTGL-----------ITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--------PLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLE-------PEPAAQGLFTIS--PENGEIRV-------KTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN----TSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPY---------GLFQIG-SHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNE 792
BLAST of Protocadherin-1 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 226.868 bits (577), Expect = 3.768e-60 Identity = 191/682 (28.01%), Postives = 314/682 (46.04%), Query Frame = 1
Query: 598 NDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKECTT-SREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
ND P FA I L+I E+ IG + +P+A+D D+ G+ASY+++ ++ F +D E K QPQL V+ +DRE + Y T+ D + +L + D NDN+P++ Y+ + E + + +KA D+D N+++D+ A R+L R+ + + + ++ ++ V K + +++KD NDNAP I I A I E+ + ++ V D D N +C + L++ +K + Y ++T D EKV Y++ I+ +D G+P L+S+ V V+D NDN+P+FT+SI E EN+ + V+A D DS NA++ YSL + F+I+ G I K DREQ+ Y V+A+D G PS TA++LV VLD ND P F Y F+++E NM + +G++ D D EN V + + F +Q NG ++ + DRE+QST + A D G PP S + VT+ + D ND+ P T PS+ S ++ + G ++++ AED D +N + + + G I G + L++ I+ R H + R++V+ SD+
Sbjct: 1 NDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQ--------AGPEAQELFGLQVAEDQEEK--QPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSD--QGANAEIDYTFHQAPE-VVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKK---------YFLQTT--TPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVME---NMPALSPVGMVTVIDGDKGENARVQLSV-----------EQDNGDFVIQ---NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRL--LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGL---HRLVVKVSDR 636 HSP 2 Score: 159.458 bits (402), Expect = 5.136e-39 Identity = 156/602 (25.91%), Postives = 253/602 (42.03%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG--KRGHVNIVLNIKDINDNSP----QWIGLPYK----ITVKECTTSREIFSL-KAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG--LIEANDEDLDE--NGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++D ND P F + E + E+ PIGH + A+D D A+ +I+ F + R + + + + V +DRE F+++A D K +V+ +KD+NDN+P + IGL + E +L + D D+ N + + F++ A + G+ K L ++ L + + VD G L +T L + + D NDNAP+ + + EN + E++ +T D D N E L E ++ L T + P+ G + + S DRE+ D Y + ++ D+GSP L + V VLD NDN P F S Y F +MEN S +G V+ D D ENA+++ S+++ + N G I + FDREQ+S Y F + A D G P RS+ + + VLD+ND P S+ + LG + + ED+D N + Y I +PY F++ + +G ++L I+R + V D GKPP + V + +N+
Sbjct: 105 LRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQG----ANAEIDYTFHQAPEVVRRLLRLDRNTGL-----------ITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--------PLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLE-------PEPAAQGLFTIS--PENGEIRV-------KTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN----TSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPY---------GLFQIG-SHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNE 653
BLAST of Protocadherin-1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 219.935 bits (559), Expect = 1.095e-57 Identity = 212/749 (28.30%), Postives = 341/749 (45.53%), Query Frame = 1
Query: 397 KHRFVIISGNVRLRNLIQLNFVTGSLHLISS-VDREELCQQ--KDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ + V +G+V L I++ TG + + +DRE+LC D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P +I ++++ E + L A DAD N +++ F +++L + + + + KL+V DGG + +++ D NDN P I I T+ + + EN + ++TV D+D E N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S + EN+ +++ +SA D DS +NA+I Y L F+++ G++ +K DRE++ Y FTV+A DNG P S A++ V VLDQND PIF +Y F + ES + H +GLI D D EN V I + +F + ++G + DRE Q + V A D G+ S++ VT+ + D+ND+KP+F P S + SF + G ++ K+ A D D +N V++ +VG + IE+ G + LKE + R++V+A+D
Sbjct: 62 QFKLVYKTGDVPL---IRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGEN--ARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLV--LATDGGSTPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSNQ---------------FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPES---LPKHGTVGLITVTDPDYGENSAVTLSI-----------LDVNDQFTID-PQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPS-NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGL---HRVIVKAND 755
BLAST of Protocadherin-1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 218.009 bits (554), Expect = 1.516e-57 Identity = 212/749 (28.30%), Postives = 341/749 (45.53%), Query Frame = 1
Query: 397 KHRFVIISGNVRLRNLIQLNFVTGSLHLISS-VDREELCQQ--KDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASD 2586
+ + V +G+V L I++ TG + + +DRE+LC D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P +I ++++ E + L A DAD N +++ F +++L + + + + KL+V DGG + +++ D NDN P I I T+ + + EN + ++TV D+D E N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S + EN+ +++ +SA D DS +NA+I Y L F+++ G++ +K DRE++ Y FTV+A DNG P S A++ V VLDQND PIF +Y F + ES + H +GLI D D EN V I + +F + ++G + DRE Q + V A D G+ S++ VT+ + D+ND+KP+F P S + SF + G ++ K+ A D D +N V++ +VG + IE+ G + LKE + R++V+A+D
Sbjct: 62 QFKLVYKTGDVPL---IRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGEN--ARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLV--LATDGGSTPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSNQ---------------FLLETA--AFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPES---LPKHGTVGLITVTDPDYGENSAVTLSI-----------LDVNDQFTID-PQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPS-NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGL---HRVIVKAND 755
BLAST of Protocadherin-1 vs. UniProt/SwissProt
Match: sp|Q08174|PCDH1_HUMAN (Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 5.936e-61 Identity = 213/787 (27.06%), Postives = 360/787 (45.74%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLI-SSVDREEL--CQQK--------DNDCSHIVIISFGS-FIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
++ E +P ++ + +L A F + H + + G LR ++ TG + +S+DRE L CQ + + + S ++ GS + E + D+ND P FA I L+I E+ IG + +P+ASD D+ G+ASY+++ ++ F +D E K QPQL V+ +DRE + Y T+ D + +L + D NDN+P++ Y+ + E + +KA D+D N+++++ A R+L R+ + + + ++ ++ V K + +++KD NDNAP I I A I E+ + ++ V D D N +C + L++ +K + Y ++T D EKV Y++ I+ +D G+P L+S+ V V+D NDN+P+FT+S+ E EN+ I ++A D DS NA++ YSL + F+I+ G I K DREQ+ Y V+A+D G PS TA++LV VLD ND P F Y F+++E NM + +G++ D D EN V + + F +Q NG ++ + DRE+QST + A D G PP S + VT+ + D ND+ P T PS+ S ++ + G ++++ AED D +N +++ + G I G + L++ I+ R H + R++V+ SD+
Sbjct: 63 KVPEEQPPNTLIGSLAADY--GFPDVGHLYKLEVGAPYLR----VDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQ--------AGPEAQELFGLQVAEDQEEK--QPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSD--QGANAEIEYTFHQAPE-VVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKK---------YFLQTT--TPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVME---NMPALSPVGMVTVIDGDKGENAQVQLSV-----------EQDNGDFVIQ---NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKL--LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGL---HRLVVKVSDR 797 HSP 2 Score: 162.54 bits (410), Expect = 4.601e-39 Identity = 159/602 (26.41%), Postives = 255/602 (42.36%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPYK----ITVKECTTSREIFSL-KAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG----LIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++D ND P F + E + E+ PIGH + A+D D A+ +IE F + R + + + + V +DRE F+++A D T K +V+ +KD+NDN+P + IGL + E +L + D D+ N + + F++ A + G+ K L ++ L + + VD G L +T L + + D NDNAP+ + + EN + E++ +T D D N E L E ++ L T + P+ G + Q++T S DRE+ + Y + ++ D+GSP L + V VLD NDN P F S Y F +MEN S +G V+ D D ENA+++ S+++ + N G I + FDREQ+S Y F + A D G P RS+ + + VLD+ND P S+ + LG + A D D N + Y I +PY F++ + +G ++L I+R + V D GKPP + V + +N+
Sbjct: 266 LRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQG----ANAEIEYTFHQAPEVVRRLLRLDRNTGL-----------ITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--------PLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLE-------PEPAAKGLFTIS--PETGEI---QVKT----SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN----TSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPY---------GLFQIG-SHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNE 814
BLAST of Protocadherin-1 vs. UniProt/SwissProt
Match: sp|Q9BZA7|PC11X_HUMAN (Protocadherin-11 X-linked OS=Homo sapiens OX=9606 GN=PCDH11X PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.507e-54 Identity = 222/799 (27.78%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
C+ FH +K+ ++ E E+ EN I L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NAKI Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P S + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 15 ACVVFHSGAQ--EKNYTIRE-EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQ---------------FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS-NCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 755
BLAST of Protocadherin-1 vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.971e-54 Identity = 221/799 (27.66%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
C+ FH +K+ ++ E E+ EN I L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NA+I Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P S + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 15 ACVVFHSGAQ--EKNYTIRE-EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQ---------------FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS-NYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 755
BLAST of Protocadherin-1 vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.076e-54 Identity = 221/799 (27.66%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
C+ FH +K+ ++ E E+ EN I L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S + +ET D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NA+I Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P S + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 15 ACVVFHSGAQ--EKNYTIRE-EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQ---------------FLLETA--AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS-NYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 755
BLAST of Protocadherin-1 vs. UniProt/SwissProt
Match: sp|Q9BZA8|PC11Y_HUMAN (Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 GN=PCDH11Y PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.514e-54 Identity = 220/799 (27.53%), Postives = 360/799 (45.06%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKL-PTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISS-VDREELCQ--QKDNDCSHIVIIS-FGSFIFELT---FLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE-GKRGHVNIV-LNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASD 2586
VC+ FH +K+ ++ E E+ EN I + L +L L P +F ++ +G+V L I++ TG + + +DRE+LC +D C + V ++ IF L FLI D+ND P F I +SI E+ I LP A D D G+ +Y++ KS +I F I+ E + PQL V K++DRE ++ Y + D +R I+ +++ D NDN P + ++++ E + L A DAD N +K+ F +R+L + + I + KL+V DGG + + +++ D NDN P I I + + + EN + ++TV D+D + N +C + L+ V S +N D E Y++ ++ D G P L S + V DENDN+P+FT+S I EN+ ++ VSA D DS NA+I Y L FS++ G++ +K DRE++ Y FT++A DNG P +S ++ V ++DQND P+F +Y+F + E N+ H +GLI D D +N V I ++ F + ++ G + DRE+Q + V A D G+ S+S VT+ + D+ND+KPVF P + S+ + G ++ ++ A D D +N V + +VG + I+++ G + L E + R+LV+A+D
Sbjct: 47 VCVVFHSGAQ--EKNYTIRE-EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPL---IRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL---IKSQNI--------FGLDVIETPEGDKM-PQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN--AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLV--LASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENA-----------------AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPE---NLPRHGTVGLITVTDPDYGDNSAVTLSI-----------LDENDDFTID-SQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVP-PYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKAND 787
BLAST of Protocadherin-1 vs. TrEMBL
Match: A0A4E0S0C6 (Uncharacterized protein OS=Fasciola hepatica OX=6192 GN=D915_000360 PE=4 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 7.967e-104 Identity = 277/945 (29.31%), Postives = 437/945 (46.24%), Query Frame = 1
Query: 358 NLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQK---DNDCS-------HIVIISFGSF-----IFELTFLIIDMNDEVPTF----AKQEIELSIL---EDVPIGHVIDLPVASDLDSQKYGIASY---------KIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQ-----------PQLKVIKKIDRETR-EKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWI----------------GLP-------------YKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTA---KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI--TSRSAKIKENKRTLEILTILTVKDEDL--EMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER-----------------------PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIF------------TKSI---------YEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN----------------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSR-SSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWY-------EIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKP-PLSNSITVTVTLNDLNDHKPVFTFPSSASGSF-------------------------------VNISSEFETGYLLAKLDAEDKDYALNGSVVFELV------------GNESLSPVTIEKDGRVILKE----------SIKSRSHRITQSDRILVRASDQ 2589
NL A LP + V L+QL TG++ +DRE LC D C+ H+ I+ F +LT L++D+ND P F + L+++ E+ PIG +I LP A+D D+Q++G+ Y ++ +F D++ R + + + +++++IQ P L+ I+++DRET +++ F L+A DT GKRG + + L ++D+ND++P+W P Y +V ECTT ++ L+A D DD K+ F++ +L + + + L + L+G+A+ L + + DG G + I+DCND+ P+I I T +E+ +++++TV+D DL N +FSC LNDTTYL LKEV++ T ++R +RG +Y++ + SFDRE Y+V+ CIDKGSP LT+S+ ++ + D NDN+P F TK I + F + E++ IGSV A D DS ENA+++Y+L + N F++ G + + DRE +S Y F V+A+D+G+ R SSTA++ + V D NDC P+FR Y F +VESYG+ +H LG + A D DL NG V Y E G + + D+ V+++ +G++++YGV+DRE+ + I +DVIA D+G P +S TVT+ + DLND+KP F P +G +N+S + G L+ K +A D DY NG++ FEL+ GN SL T+ DGR+IL S + R + D +L+R SDQ
Sbjct: 106 NLMANLPPQRR------------VNFVQLVQLEPSTGAVRFTVPLDRERLCPDTIGTDQRCTISLLVAIHLTPINSSHFKPLTVYADLTVLVLDVNDNAPYFTSSNSADSAPLAVITVDEECPIGTMIQLPQATDPDTQEHGVQRYEFHPTSTAVRVREHF---DVVQFRHQPGLRCEDVTSVQLEMIQSVAPADPRPVVPCLRTIRRLDRETAGDQFHFNLIATDTNGKRGEIAVQLLVRDVNDHAPEWATKLELFDSSSRSHWISASPSDPAHGTESRQTHYTFSVPECTTQHKLIRLEAQDKDDPQQDGGKITFRLSEHSPDRLPTTLRRRLFVSNDHLYLT--DRGLRGLAQPNLTIVVVASDGAGRNTEAWFHLRIEDCNDHRPMILIQNTDYITIPEESAGQSHLVSLITVRDFDLVTSPNSQFSCFLNDTTYLELKEVVAGP--TADDRDLLHSHSHQGDEITSTGGKEDLSSRRGRWSVYRLGSRSEISFDRETSALYTVMFECIDKGSPSLTASRPITIHIEDINDNAPQFITRCAPLPLSQNTKDIKPNRPCTPQFVFTVSEDAERGILIGSVRAVDLDSGENARVEYTLLSLHNNSTVPDSNESEVFRPETLFTVTPMGELHLLGELDRESQSYYEFLVVATDHGKRQRLSSTATVQITVADVNDCAPVFRGDYVFEVVESYGSSTIHQVLGTLNATDADLGRNGSVHYRLAVHPRESGLSGLSKSMSDSAVPGAQLVKVSHDGQITVYGVVDREQITMIMVDVIAEDNGVPLHMSTMTTVTIHVLDLNDNKPRFVQPEFTAGRLPSSFSNQKPERFNTLGLPPSFEALSSDATYKLNLSLDTSIGTLITKFEAFDPDYGPNGTLTFELIYSGGTMQTRSDPGNSSLFTFTLHPDGRLILTNHLEFDTVYTGSTRLVPRRYRRPDHLLIRVSDQ 1031
BLAST of Protocadherin-1 vs. TrEMBL
Match: A0A504YTS1 (Putative cadherin OS=Fasciola gigantica OX=46835 GN=FGIG_04381 PE=4 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.932e-69 Identity = 191/660 (28.94%), Postives = 313/660 (47.42%), Query Frame = 1
Query: 439 NLIQLNFVTGSLHLISSVDREELCQQK---DNDCS-------HIVIISFGSFI-----FELTFLIIDMNDEVPTF----AKQEIELSIL---EDVPIGHVIDLPVASDLDSQKYGIASY---------KIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQ-----------PQLKVIKKIDRET-REKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWI----------------GLP-------------YKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTA---KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI--TSRSAKIKENKRTLEILTILTVKDEDL--EMNCEFSCHLNDTTYLHLKEVMS-----------RSLSTKNE----------RPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIF------------TKSI---------YEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN----------------IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSR-SSTASILVKVLDQNDCKPIFRKQYEFNI 2004
L+QL TG++ +DRE LC D C+ H+ I+ F +LT L++D+ND P F + L+++ E+ PIG +I LP A D D+Q++G+ Y ++ +F DI+ R + + + +++++IQ P L+ I+++DRET +++ F L+A DT GKRG + + L ++DIND++P+W P Y +V ECTT ++ L+A D DD K+ F++ +L + + + + L + L+G+A+ L + + DG G + I+DCND+ P+I I T +E+ +++++TV+D DL N +FSC LNDTTYL LKEV++ L +E +RG +Y++ + SFDRE Y+V+ CIDKGSP LT+S+ ++ + D NDN+P F TK + + F + E++ IGSV A D DS ENA+++Y+L + N F++ + G + + + DRE++S Y F V+A+D+G+ R SSTA++ + V D NDC P+F Y F +
Sbjct: 115 QLVQLEPSTGAVRFTVPLDRERLCPDTIGTDQRCTISLLVAIHLTPINSSHFTPLTVYADLTVLVLDVNDNAPYFTSSNSADSAPLAVITVDEECPIGTMIQLPQAIDPDTQEHGVQRYEFHPTSTAVRVREHF---DIVQFRRQPGLRCEDVTSVQLEMIQSVASADTLPVVPCLRTIRRLDRETVGDQFHFNLIATDTNGKRGEIAVQLLVRDINDHAPEWATKLELFDSSSRSHWISASPSDPAHGTESRRTHYTFSVPECTTQHKLIRLEAQDKDDPQQDGGKVTFRLSEHSPDRLITTLRRRLFVSNNHLYLT--DRGLRGLAQPNLTIVVVASDGAGRNTEAWFHLRIEDCNDHRPMILIQNTDHITIPEESTGQSHLVSLITVRDFDLITSPNSQFSCFLNDTTYLELKEVVAGPKADDRDMLHSHLHQGDEITSAGDKEDLSSRRGRWSVYRLGSRSEISFDRETSALYTVMFECIDKGSPSLTASRPITIHIEDINDNAPQFITRCAPLPLSQNTKDLKPNRPCMPQFVFTVSEDAERGILIGSVRAVDLDSGENARVEYTLHSLHNNSTAPDSNESEVFRPETLFTVTLMGELHLRGELDRERQSYYEFLVMATDHGKRQRLSSTATVQITVADVNDCAPVFHGDYVFEV 769 HSP 2 Score: 73.559 bits (179), Expect = 2.878e-9 Identity = 63/225 (28.00%), Postives = 101/225 (44.89%), Query Frame = 1
Query: 1738 SAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF----------------------RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQ----ITKNGKLSLYGVIDREEQSTIYIDVIARDHGK-PPLSNSITVTVTLNDLNDHKPVF 2331
SA DK+ + + ++S+ +G+ ++ FDRE +LY D G PS +++ I + + D ND P F Q+ F + E + +G + A D D EN V Y + + PD+ +++ F+ + +T G+L L G +DRE QS V+A DHGK LS++ TV +T+ D+ND PVF
Sbjct: 551 SAGDKEDLSSRRGRWSVYRLGS-----------RSEISFDRETSALYTVMFECIDKGSPSLTASRPITIHIEDINDNAPQFITRCAPLPLSQNTKDLKPNRPCMPQFVFTVSEDAERGIL---IGSVRAVDLDSGENARVEYTLHSLHNNSTAPDSNESEVFRPETLFTVTLMGELHLRGELDRERQSYYEFLVMATDHGKRQRLSSTATVQITVADVNDCAPVF 761
BLAST of Protocadherin-1 vs. TrEMBL
Match: A0A068WE58 (Protocadherin gamma B1 OS=Echinococcus granulosus OX=6210 GN=EgrG_000834200 PE=4 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.973e-69 Identity = 234/818 (28.61%), Postives = 363/818 (44.38%), Query Frame = 1
Query: 307 LFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFL-----------------IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQ-----PQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC---------------------------TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKEN------------------KRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVI--IYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVI-VLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL----DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR------KQYEFNIVESYGNMAVHNN-LGLIEANDEDLDENGLVWYEIGAT-SPYVN-NPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGK--PPLSNSITVTVTLNDLNDHKPVFTFPSS------ASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSP 2484
+ + +KEN P + + L + + F ++G L I ++ GS+ I ++DRE +CQ ++ S +V+ F S E+ FL IIDMND P F + +S+ E PIG + LP A D D K GI+SY + + + C +++ D + PQL+ I +D E + + L A D G + I + I+D+NDNSPQW+GLPY + ++EC T R + L A DAD + N + FK+ K S + + + + I G L K + ++ DGGGL N T++ ++++DCNDN P I++TS S +EN R +++ TI TV D D N SC + + L T P + + ++ + + FDRE V I+C D+G PQ ++Q I V D NDN+P F K + + EN + G V A D D NA +KYS+ + + F+I+ G I T DRE K++Y TV A D G+P SS+ + + VLD ND P+F+ + F I ES+ + +G + A D D NG + + I T P+ + NP A +IT+ G+L + GV+DRE+Q + V+ D G L++ I VT+ L D ND+ PVFT P + A + +N + + + ++ A+D D NG + F L + L P
Sbjct: 21 MHQFYIKENTPAGTLIGQL-------IVQHQKTFTSLAGQ-PLSEYILIHPTNGSMLAIQTIDREAICQNDESTNSSLVLHRFESPSCEVAFLVHITTNEESLLETVQLTIIDMNDNSPIFEPSSVTISVPESSPIGGLFYLPPAKDADLGKNGISSYHLSRIHSDSGP-----QACPSYTANDDGYFTLSMTDENTPQLRQISGLDYEKFQNLFYCLHAYDGGGLTSALLIAVEIQDVNDNSPQWVGLPYHVHLRECAQQSQQSLWKTSAELRSFLRLSGFAYDTPFRFLIQLAAIDADSKE--NGLIKFKVVQRK---SDIQASYKVVVHGDKVYIIGQLDYETTPKFSIAVEAKDGGGLTNVTNIDVTLEDCNDNTPKITVTSLSPLPRENLSDWSYYKLTDIWISEEDGREIKLATI-TVSDADTGENAAVSCDIEWNNLVCTNPFSLVPLKT----PAAAIRVPTVFMLLKRDGIKFDREATSRVQVTIVCADRGRPQANIARQMVDIGVWDINDNAPKF-KHRGDIGVQENEPDGTVAGYVHASDIDFGRNAALKYSIKNCKHNVSTLSFTIDERTGKISTLRSLDRENKAVYCVTVEAVDEGDPQLSSSVDVNITVLDVNDSPPVFQGNKNESGRIVFEIPESFDQERLMERFIGQVNATDADSGANGTLEFSIKQTPGPFWHSNPPA------YFRITRKGQLYVDGVLDREKQQEHEVTVVVSDTGAFHQRLTSEIGVTIRLQDQNDNSPVFTEPGALSKGPHAGPATLNTTHDVTVNSSILRICAKDNDLQENGKLNFTLRCAKYLRP 808
BLAST of Protocadherin-1 vs. TrEMBL
Match: A0A068YEU7 (Protocadherin gamma B1 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000834200 PE=4 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.478e-69 Identity = 232/816 (28.43%), Postives = 360/816 (44.12%), Query Frame = 1
Query: 307 LFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFL-----------------IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQ-----PQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC---------------------------TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKEN------------------KRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVI-VLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL----DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR------KQYEFNIVESYGNMAVHNN-LGLIEANDEDLDENGLVWYEIGAT-SPYVN-NPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGK--PPLSNSITVTVTLNDLNDHKPVFTFPSS------ASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSP 2484
+ + +KEN P + + L + + F ++G L I ++ GS+ I ++DRE +CQ + S +V F + E+ FL IIDMND P F + +S+ E PIG + LP A D D K GI+SY + + + C +++ D + PQL+ I +D E + + L A D G + + + I+D+NDNSPQW+GLPY + ++EC T R + L A DAD + N + FK+ K S + + + + I G L K + ++ DGGGL N T++ ++++DCNDN P I++TS S +EN R +++ TI TV D D N SC + + L T K + ++ + + FDRE V I+C D+G PQ ++Q I V D NDN+P F K + + EN + G V A D D N+ +KYS+ + + F+I+ G I T DRE K++Y TV A+D G+P SS+ + + VLD ND P+F+ + F I ES+ + +G + A D D NG + + I T P+ + NP A QIT+ G+L + GV+DRE+Q V+ D G L++ I VT+ L D ND+ PVFT P + A + +N + + + ++ A+D D NG + F L + L P
Sbjct: 21 MHQFYIKENTPAGTLIGQL-------IVQHQKTFTSLAGQ-PLSEYILIHPTNGSMLAIQTIDREAICQNDKSTNSSLVSHQFENPSCEVAFLVHITTNEESLLETVQLTIIDMNDNSPIFEPSSVTISVPESSPIGGLFYLPPAKDADLGKNGISSYHLSRIHSDSGP-----QACPSYTANDDSYFTLSMTDENTPQLRQISGLDYEKFQNLFYCLHAYDGGGLTSALLVAVEIQDVNDNSPQWVGLPYHVHLRECAQQPQQSLWKTSAELRSFLRLSGFAYDTPFRFLIQLAAIDADSKE--NGVIKFKVVQRK---SDIQASYKVVVHGDKVYIIGQLDYETTPKFSIAVEAKDGGGLTNVTNIDVTLEDCNDNTPKITVTSLSPLPRENLSDWSYYKLTDIWISEEDGREIKLATI-TVSDADTGENAAVSCDIEWNNLICTNPFSLVPLKTPAAAIK--VPTVFMLLKRDGIKFDREVTSRVQVTIVCADRGHPQANIARQMVDIGVWDINDNAPKF-KHRGDIGVQENEPDGTVAGYVHASDIDFGRNSALKYSIKNCKHNVSTLSFTIDERTGKILTLRSLDRENKAVYCVTVEAADEGDPQLSSSVDVNITVLDVNDSPPVFQGNKNESGRIVFEIPESFNQERLRERFIGQVNATDADSGANGTLEFSIKQTPGPFWHSNPPA------YFQITRKGQLYVDGVLDREKQQEHEFTVVVSDTGAFHQRLTSEIGVTIRLQDQNDNSPVFTEPGALSKGPHAGPATLNTTHDVTVNSSILRICAKDNDLEENGKLNFTLRCAKYLRP 808
BLAST of Protocadherin-1 vs. TrEMBL
Match: W6USW6 (Protocadherin beta-11 OS=Echinococcus granulosus OX=6210 GN=EGR_01394 PE=4 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 3.375e-68 Identity = 223/760 (29.34%), Postives = 340/760 (44.74%), Query Frame = 1
Query: 481 ISSVDREELCQQKDNDCSHIVIISFGSFIFELTFL-----------------IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQ-----PQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC---------------------------TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKEN------------------KRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVI--IYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVI-VLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL----DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR------KQYEFNIVESYGNMAVHNN-LGLIEANDEDLDENGLVWYEIGAT-SPYVN-NPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGK--PPLSNSITVTVTLNDLNDHKPVFTFPSS------ASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSP 2484
I ++DRE +CQ ++ S +V+ F S E+ FL IIDMND P F + +S+ E PIG + LP A D D K GI+SY + + + C +++ D + PQL+ I +D E + + L A D G + I + I+D+NDNSPQW+GLPY + ++EC T R + L A DAD + N + FK+ K S + + + + I G L K + ++ DGGGL N T++ ++++DCNDN P I++TS S +EN R +++ TI TV D D N SC + + L T P + + ++ + + FDRE V I+C D+G PQ ++Q I V D NDN+P F K + + EN + G V A D D NA +KYS+ + + F+I+ G I T DRE K++Y TV A D G+P SS+ + + VLD ND P+F+ + F I ES+ + +G + A D D NG + + I T P+ + NP A +IT+ G+L + GV+DRE+Q + V+ D G L++ I VT+ L D ND+ PVFT P + A + +N + + + ++ A+D D NG + F L + L P
Sbjct: 4 IQTIDREAICQNDESTNSSLVLHRFESPSCEVAFLVHITTNEESLLETVQLTIIDMNDNSPIFEPSSVTISVPESSPIGGLFYLPPAKDADLGKNGISSYHLSRIHSDSGP-----QACPSYTANDDGYFTLSMTDENTPQLRQISGLDYEKFQNLFYCLHAYDGGGLTSALLIAVEIQDVNDNSPQWVGLPYHVHLRECAQQSQQSLWKTSAELRSFLRLSGFAYDTPFRFLIQLAAIDADSKE--NGLIKFKVVQRK---SDIQASYKVVVHGDKVYIIGQLDYETTPKFSIAVEAKDGGGLTNVTNIDVTLEDCNDNTPKITVTSLSPLPRENLSDWSYYKLTDIWISEEDGREIKLATI-TVSDADTGENAAVSCDIEWNNLVCTNPFSLVPLKT----PAAAIRVPTVFMLLKRDGIKFDREATSRVQVTIVCADRGRPQANIARQMVDIGVWDINDNAPKF-KHRGDIGVQENEPDGTVAGYVHASDIDFGRNAALKYSIKNCKHNVSTLSFTIDERTGKISTLRSLDRENKAVYCVTVEAVDEGDPQLSSSVDVNITVLDVNDSPPVFQGNKNESGRIVFEIPESFDQERLMERFIGQVNATDADSGANGTLEFSIKQTPGPFWHSNPPA------YFRITRKGQLYVDGVLDREKQQEHEVTVVVSDTGAFHQRLTSEIGVTIRLQDQNDNSPVFTEPGALSKGPHAGPATLNTTHDVTVNSSILRICAKDNDLQENGKLNFTLRCAKYLRP 741
BLAST of Protocadherin-1 vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]) HSP 1 Score: 217.624 bits (553), Expect = 1.808e-57 Identity = 223/814 (27.40%), Postives = 362/814 (44.47%), Query Frame = 1
Query: 298 SSSLFEI--ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLIS-SVDREELCQQKDNDCSHI----------------VIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECT-TSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLK----VVDGGGLQNTTD--LTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
SSL I +L+E +P ++ + +L A + H + + G LR ++ TG ++ +DRE L DC ++ ++ G + E I D ND P F +EL+I E+ +G +PVA D D+ GIA YK+ + +D M + F + + K+ PQL V+ +DRE R+ Y ++ +D T + + + I D NDN P++ Y+ + E T + + +KA DD N ++ + R L +KG + + V LK D G ++ +TI++KD NDNAP I I A + E+ + ++ V D+D N +C + L RS S + KR Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P+F+ S+YE + E + ++ V A D DS NA++ YS+ D F IN G + + DRE K Y F V A+D G PS TA+++V+VLD+ND P F Y F+++E NM + +G++ D D EN V + + +F +Q NG ++ I DRE++ST + A D G PP S+ + +T+ + D ND+ P T PS++S F+ + +T + K+DAED D LN +V+ + G I DG + L + +R H R++V+ SD+ + +
Sbjct: 29 GSSLASITYQLREEQPPNTLVGSLAAD--QGLPDTGHLYKLEVGGPYLR----VDGKTGDIYTTDVPIDRETL-----KDCRNLFEGDPCFLEFEVSITDLMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPENTYVGAHYSIPVAMDKDAGSNGIADYKLNS---GSDAM-----NLFSLQVADNTDEKV--PQLIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSALLRITITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKA--NDDDLGANGQVTYSFHQPSPNVQRLLHIDHNTGIIQ-------VKGSVDREEVPLLKFSVQARDNGPQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQL-----RSASASDSTSKRK----YFLQTT--TPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLE---NMPPLSPVGMVTVIDADKGENAHVQLSV-----------EPENGKFVIQ---NGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKFLQPLTSPDT--RVEKVDAEDIDTGLNAELVYSITGGNPHGLFRISSTDGEITLAKEF-TRKHNGLH--RLVVKVSDKGKPSRHT 779 HSP 2 Score: 131.724 bits (330), Expect = 1.500e-30 Identity = 160/644 (24.84%), Postives = 255/644 (39.60%), Query Frame = 1
Query: 472 LHLISSVDREELCQQKDNDCSHIVIISFG------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE---------CTTSREIFSLKAFDADDQNN------INSKLDFKIDTAKLGNS---RKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++ ++DRE Q+D I +I G S + +T I D ND VP F + E + E+ P+G + A+D D G +Y F +R D IIQ V +DRE F++ A D + K + + +KD NDN+P + + E + ++ D D+ N + + F++ +A +S RK + + E ++ +A VD G L +T L + + D NDNAP+ S + E + + + + D D N E Y + + ++ L N P G V + DRE + Y + DKG P L + V VLD NDN P F + Y F ++EN S +G V+ D D ENA ++ S++ + N G I + FDRE++S Y F + A D G+P RSS I + VLD+ND P K Y+F + + V ++A D D N + Y I +P+ F++ T +G+++L R+ + V D GKP + V + +N+
Sbjct: 207 LIVLGNLDRE----QRDTYDLSIKVIDGGTPPRYSSALLRIT--ITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYS----FHQPSPNVQRLLHI-------DHNTGIIQ----VKGSVDREEVPLLKFSVQARDNGPQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRIEIVA----------VDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAEL-------LYSIITDSATKGLFDIN--PNTGEVRVMN-------QLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSVEPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKFLQPLTSPDTRVEK----VDAEDIDTGLNAELVYSITGGNPH---------GLFRISST-DGEITLAKEFTRKHNGLHRLVVKVSDKGKPSRHTTALVHIFVNE 789 HSP 3 Score: 100.523 bits (249), Expect = 5.796e-21 Identity = 135/582 (23.20%), Postives = 242/582 (41.58%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTF--------AKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM------KLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETN--ENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK---SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
S +E E+ EN P+ ++ +KA + + + ++ L+ ++ TG + + SVDREE+ Q +DN S +T + D ND P+ A ++ ++ ED+P+G + L SD D + + + + + D+ + + +S D K + L+ +D E ++Y +VA+D+ ++ + + D+NDN+P + Y++ +E ++ + A DAD N D+A G ++ G ++ M ++ + ++ D G L+ T + + + D NDN P + S + EN L + ++TV D D N + P+ G +I + SFDREK Y+ + +D G P +S ++ VLDENDN+P TK S Y+F + + + + V A D D+ NA++ YS+ GN + F I+ G I ++F R+ L+ V SD G+PSR +TA + + V
Sbjct: 258 SHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSPNVQRLLHIDHNTGIIQVKGSVDREEVPLLKFSVQARDNGP------QAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVV-----AGDVPFQ-----LRSASASDSTSK-RKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKG------------LFDINPNTGEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSV---------------------EPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKF-LQPLTSPDTRVEKVDAEDIDTGLNAELVYSITG-GNPHGLFRISSTDGEITLAKEFTRKHNGLHRLVVKVSDKGKPSRHTTALVHIFV 787
BLAST of Protocadherin-1 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 216.853 bits (551), Expect = 2.493e-57 Identity = 216/797 (27.10%), Postives = 363/797 (45.55%), Query Frame = 1
Query: 322 LKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLIS-SVDREEL--CQQKDNDCSHIVIISFGSFI-------FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI--------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES-----LSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
++E +P ++ + +L A ++ H + + G LR ++ TG + +DRE L C+ K C +S I E + D+ND P F + LS+ E+ +G +P A+D D+++ G+ Y + +++ + F D K+ PQL V+ +DRE ++ Y T+ A+D T + + + I D NDN+PQ+ Y+ V E + +KA D+D N ++++ I A + + S +I ++G L + ++ K V + +TT ++I + D NDNAP + I + A I E+ + ++ V D+D N +C + L+ S+ K + Y ++T D E++ Y V I+ +D G+P L+S+ V V D NDNSPIF+ ++E E E + ++ V A D DS NA++ YS+ D F I+ G + + DRE K Y F V A+D G PS TA++++KVLD+ND P F Y F+++E NM + +G++ D D EN V + P V N F VQ NG ++ I DRE++S+ + A D G+PP S+ + VT+ + D ND+ PV T PS++ SF +S ++ ++AED DY N +V+ + G +SP DG + L + + +R H R++V+ SD+ + +
Sbjct: 29 VREEQPPNTLIGSLAAD--QGLPDSGHLYKLEVGAPYLR----VDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASAL--------FSLQMANDRGEKL--PQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSD--LGPNGEIEYTIHQA---SDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKK---------YFLQTT--TPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLE---NMPPLSPVGMVTVLDMDKGENAQVQLSV---EPDVGN--------FVVQ---NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNS--SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISP----SDGEIKLTKEL-TRKHGGLH--RLVVKVSDRGKPSRHA 767 HSP 2 Score: 132.109 bits (331), Expect = 1.097e-30 Identity = 145/582 (24.91%), Postives = 236/582 (40.55%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA---KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD-EIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSP----YVNNPDAE------------KTKRFKVQITKNGKLSLYGV 2202
L +I D ND P F K E + E+ P+G+ + A+D D G Y I +++D + K L+++ + V +DRE + F ++A D K + + + D NDN+P + IGL + V + + + A D D+ N + + F++ A + N +K + + + ++ +A VD G L +T L + + D NDN+P+ S + E + E + + D D N E Y + + +R L + P G E DRE + Y + DKG P + + VLD NDN P F S Y F ++EN S +G V+ D D ENA+++ S++ ++GN N G I + FDRE++S Y F + A D GEP RSS + + VLD+ND P+ K + A + + ++EA D D N + Y I +P Y++ D E R V+++ GK S + +
Sbjct: 229 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIH---QASDPVP------------KMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVA----------VDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAEL-------VYSIIADSSTRGLFEID--PSSG-------EVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQ-NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAI 768 HSP 3 Score: 92.4337 bits (228), Expect = 1.665e-18 Identity = 136/576 (23.61%), Postives = 237/576 (41.15%), Query Frame = 1
Query: 286 KLDKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETN--ENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK-SIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN----IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
+ +KSS +E E+ EN P+ ++ +KA + + I + + ++Q+ TG + + +DREE+ K + + S S ++ + D ND P + I L +I ED+P+G + L SD D + + + + + D+ F+ S D + K L+ +D E Y +VA+D+ ++ + + D NDNSP + +++ +E ++ + A DAD + N++L + I + +S S+ + L + + + D G + T + I + D NDN P ++S S + EN L + ++TV D D N + + P G ++ + SFDREK Y+ + +D G P +S ++ VLDENDN+P+ TK S F + + S + V A D D NA++ YS+ GN Y S + + TKE R+ L+ V SD G+PSR + A + + V
Sbjct: 242 QFEKSS--YEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVV-----AGDV---PFQLRPAGDSSVDNKKKYF---LQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDAD--SGTNAELVYSI----IADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSV---------------------EPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAG-GNPHELFYISPSDGEIKLTKE-LTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYV 775
BLAST of Protocadherin-1 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 218.009 bits (554), Expect = 3.135e-57 Identity = 216/797 (27.10%), Postives = 363/797 (45.55%), Query Frame = 1
Query: 322 LKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLIS-SVDREEL--CQQKDNDCSHIVIISFGSFI-------FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLN--IKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL--KGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISI--------TSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES-----LSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
++E +P ++ + +L A ++ H + + G LR ++ TG + +DRE L C+ K C +S I E + D+ND P F + LS+ E+ +G +P A+D D+++ G+ Y + +++ + F D K+ PQL V+ +DRE ++ Y T+ A+D + + +L I D NDN+PQ+ Y+ V E + +KA D+D N ++++ I A + + S +I ++G L + ++ K V + +TT ++I + D NDNAP + I + A I E+ + ++ V D+D N +C + L+ S+ K + Y ++T D E++ Y V I+ +D G+P L+S+ V V D NDNSPIF+ ++E E E + ++ V A D DS NA++ YS+ D F I+ G + + DRE K Y F V A+D G PS TA++++KVLD+ND P F Y F+++E NM + +G++ D D EN V + P V N F VQ NG ++ I DRE++S+ + A D G+PP S+ + VT+ + D ND+ PV T PS++ SF +S ++ ++AED DY N +V+ + G +SP DG + L + + +R H R++V+ SD+ + +
Sbjct: 65 VREEQPPNTLIGSLAAD--QGLPDSGHLYKLEVGAPYLR----VDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASAL--------FSLQMANDRGEKL--PQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSD--LGPNGEIEYTIHQA---SDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKK---------YFLQTT--TPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLE---NMPPLSPVGMVTVLDMDKGENAQVQLSV---EPDVGN--------FVVQ---NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNS--SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISP----SDGEIKLTKEL-TRKHGGLH--RLVVKVSDRGKPSRHA 803 HSP 2 Score: 132.494 bits (332), Expect = 9.727e-31 Identity = 145/582 (24.91%), Postives = 235/582 (40.38%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGL-PYKITVKECTTSREIFSLKAF----DADDQNN------INSKLDFKIDTA---KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD-EIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSP----YVNNPDAE------------KTKRFKVQITKNGKLSLYGV 2202
L +I D ND P F K E + E+ P+G+ + A+D D G Y I +++D + K L+++ + V +DRE + F ++A D K + + + D NDN+P + IGL + V + + + A D D+ N + + F++ A + N +K + + + V + VD G L +T L + + D NDN+P+ S + E + E + + D D N E Y + + +R L + P G E DRE + Y + DKG P + + VLD NDN P F S Y F ++EN S +G V+ D D ENA+++ S++ ++GN + N G I + FDRE++S Y F + A D GEP RSS + + VLD+ND P+ K + A + + ++EA D D N + Y I +P Y++ D E R V+++ GK S + +
Sbjct: 265 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIH---QASDPVP------------KMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRD----------YRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAEL-------VYSIIADSSTRGLFEID--PSSG-------EVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGN-FVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAI 804 HSP 3 Score: 93.2041 bits (230), Expect = 1.228e-18 Identity = 136/576 (23.61%), Postives = 237/576 (41.15%), Query Frame = 1
Query: 286 KLDKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETN--ENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK-SIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN----IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
+ +KSS +E E+ EN P+ ++ +KA + + I + + ++Q+ TG + + +DREE+ K + + S S ++ + D ND P + I L +I ED+P+G + L SD D + + + + + D+ F+ S D + K L+ +D E Y +VA+D+ ++ + + D NDNSP + +++ +E ++ + A DAD + N++L + I + +S S+ + L + + + D G + T + I + D NDN P ++S S + EN L + ++TV D D N + + P G ++ + SFDREK Y+ + +D G P +S ++ VLDENDN+P+ TK S F + + S + V A D D NA++ YS+ GN Y S + + TKE R+ L+ V SD G+PSR + A + + V
Sbjct: 278 QFEKSS--YEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVV-----AGDVP---FQLRPAGDSSVDNKKKYF---LQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDAD--SGTNAELVYSI----IADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSV---------------------EPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSI-AGGNPHELFYISPSDGEIKLTKE-LTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYV 811
BLAST of Protocadherin-1 vs. Ensembl Cavefish
Match: ENSAMXT00000003988.2 (FAT atypical cadherin 4 [Source:NCBI gene;Acc:103037566]) HSP 1 Score: 207.608 bits (527), Expect = 1.567e-53 Identity = 187/684 (27.34%), Postives = 316/684 (46.20%), Query Frame = 1
Query: 586 IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNI---------NSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLK-EVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEI-GNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE---SLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+ D+ND P F++ I ED+ G ++ +ASD DS G +Y +E ED ++ + + + V + +D ET++ Y T+ A+D G+ V + N+ D+NDN P + Y ++ E T I ++ A DADD N + + F I TA + +RKL S NL++ + +M L + +T +++ + D ND P+ + + + A I+EN ++ + D D N L + + + + S+ E DRE++ YS+ I+ DKG P L+S+ +++VLD NDN+P F+++IY+ EI EN++ +++ V A D D N +I++S+ GN F I+ + GVI + DRE ++ Y+ V A+D G R A++ + +LD NDC P+F Y + E+ ++ N+ + D+D NG + Y + N DA +T +G+L L +DRE Q + + A D G P LS S TV V ++D+ND P+F S+S +I+ + TG + ++A D D NG + + L G + S++P T + I+ S+ R R + ++LV ASD
Sbjct: 1812 VSDVNDHTPKFSRSVYSFDIPEDMAPGSIVAAILASDSDSGVNGEITYSLE-------------EDDGDYTFL----LNPVTGVFNVTQPLDYETQQYYILTVRAVDGGGQASSVRVYFNVLDVNDNRPAFNTSVYSTSISESLTPGSSILTVAASDADDGPNAQLSYSIASGDPQAHFGITTAGVLQTRKLLDRETQSFYNLVVT------VNDMALPPATR------FTSTAQVSVILLDVNDCPPVFT-SQKMAYIQENTAVDTVVFTVQATDADSGPNSYVEYSLGGSYGVKFSIDNIDGSVRLVGE-------------------LDREEMANYSLTIVATDKGQPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEENTLSGTDVLQVFASDADEGTNGQIRFSIAAGNGNSDFRIDSVTGVISVAKLLDRETRASYSLVVQAADRGSSPRVDRATVNIVLLDVNDCAPVFELSPYTVRVQENLADLP--KNILQVVGRDDDYGSNGQLSYSLSG-----GNEDA------AFSLTSSGQLKLIRTLDRETQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLF----SSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGVITYSLSGGDGQFSINPATGQ-----IITSSLLDRESR--GNYQLLVVASD 2422 HSP 2 Score: 188.734 bits (478), Expect = 1.175e-47 Identity = 190/708 (26.84%), Postives = 313/708 (44.21%), Query Frame = 1
Query: 442 LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGI--ASYKI-----ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG---KRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISI-----TSRSAKIKENKRTLEILTILTVKDED-LEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSS-QQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI-YFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESL 2478
L +N TG ++ S +DRE L N +V+ S ++ E+ +++D+ND P F I +S ED G + L A+D D G+ +Y+I + F+ + E F L +DRE Y L+ ++ +G + G++ + + I+DINDN P + Y+ +V E + + A D D+ N ++ F+ID K G ++I+ AL + + + + VD G L T+ TI + D NDN P++ TS+ A + EN + ++ +LTV D D N S + EV + + P ++ + + DRE++ Y++ + D G P SS + V D ND+ PIF +++Y+ +I E+ S I VSA D DS +NA ++YSL ++ +F+I+ G++ + DRE S+ + A D G + S ++V + D ND P F + Y ++VE + + L + A D DL NG V + A +P A + F++ T GKLS +DRE+ + + V A D G PPL + V VTL D+ND++PVF +P F NI G + + A D D NG+V + + ++
Sbjct: 68 LFAINATTGVVYTSSVIDRESLASSVIN---VVVLSSQPTYPTEVRIVVLDINDNSPVFPDTSIVVSFKEDATSGRQVILDTATDADIGSNGVDHTTYRIVQGNEQRKFRLDITVNPSGEGAFL--------------HLVTTGGLDRELAPFYQL-LIEVEDKGEPKRYGYLQVNVTIQDINDNPPAFDLDQYQTSVYEDAAIGSSVLQITATDQDEGANSDIRYFLDEGTPFQID-PKAGT---------------VVIKEALDYEVKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSSSANGNISVSILGGNEQGHFEVHTSPV------PNLSLIKVASV-------LDRERISSYNLTVSVSDNGRPVSRSSFASLVIFVNDINDHPPIFQEAVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFAISENSGLVTSAALLDRETASVVVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFTQSSYHVSLVE---HSPAGSELLSLSATDTDLGANGTVRFTFDAETP------ATVQELFRLD-TITGKLSTTTELDREDMGSYLLYVRATDAGAPPLHSIAKVNVTLKDINDNRPVF-YPVQY---FANIKENEPPGSYVTTVSASDPDLGRNGTVRYTITAGDTF 714 HSP 3 Score: 176.022 bits (445), Expect = 9.233e-44 Identity = 181/748 (24.20%), Postives = 323/748 (43.18%), Query Frame = 1
Query: 322 LKENKPIHSELINLKAKLPTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFI--FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQ---LKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSP---QLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSI-NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESI 2529
LKE +P + +I+L A P F++ SG + L + TG + +DRE D I + E+ + D+ND P F +++++ E+V G I A+D D + +Y I +D F+ I P+ L K++DRE R KYS LV D + + + + + D+ND++P++ Y + E I + +D + +N ++ + ++ L + + L + ++ ++ VDGGG ++ + ++ D NDN P + + S I E+ + + D D N + +S S+++ + + G+ ++T K DRE FY++++ D P + TS+ Q SVI+LD ND P+FT + I EN+ + + +V A D DS N+ ++YSL + FSI N+ G + + DRE+ + Y+ T++A+D G+P SST + + VLD ND P F + Y+ I E N ++ + A+D D NG + + I A + N D F++ + G +S+ ++DRE +++ + V A D G P + TV + L D+ND PVF N++ + + ++ D DY NG + + L G + ++ G++ L ++
Sbjct: 1619 LKEGQPPGTNVISLDASSPRGTGTKVEYFIVSVRSGGKAVGRLFTIGRHTGVIQTAMELDREHGADLYLLDVYAIETEASQPHTQRAEVEITLQDINDNPPIFPTDILDVTVQENVGDGFRIMQLTATDADEGPNALVTYTI----------ISGADDSFR-----------IDPESGDLIATKRLDRERRSKYSL-LVRADDGQQSSDMTVNITVSDVNDHTPKFSRSVYSFDIPEDMAPGSIVA-AILASDSDSGVNGEITYSLE-----EDDGDYTFLLNPVTGVFNVTQPLDYETQQYYILTVRAVDGGGQASSVRVYFNVLDVNDNRPAFNTSVYSTSISESLTPGSSILTVAASDADDGPNAQ----------------LSYSIASGDPQAHFGITTAGVLQT--RKLLDRETQSFYNLVVTVNDMALPPATRFTSTAQVSVILLDVNDCPPVFTSQKMAY-IQENTAVDTVVFTVQATDADSGPNSYVEYSLGGSYGVKFSIDNIDGSVRLVGELDREEMANYSLTIVATDKGQPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEE---NTLSGTDVLQVFASDADEGTNGQIRFSIAAGN---GNSD------FRID-SVTGVISVAKLLDRETRASYSLVVQAADRGSSPRVDRATVNIVLLDVNDCAPVFELSPYTVRVQENLADLPKN---ILQVVGRDDDYGSNGQLSYSLSGGNEDAAFSLTSSGQLKLIRTL 2303 HSP 4 Score: 163.696 bits (413), Expect = 5.321e-40 Identity = 192/727 (26.41%), Postives = 309/727 (42.50%), Query Frame = 1
Query: 463 TGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFE----LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK---RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSRE-IFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK-DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATS-PYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK---SRSHRITQSDR--ILVRASDQ 2589
+G L LI ++DRE +D I I GS + L+ D+ND VP F+ SI ED P G + L ASD D + G+ +Y + +F SI +II L +DRE+R Y +VA D + + + DINDN P++ PY + T +F++ D D +N S+L + + + R + I L G +E+ V +V DGG T T++++ + P+I I +S EN+ I+T ++ + N H+ + +S LS K D E ++ Y + I D+ P ++ ++ + VLD NDN+P+F K + EI+EN + + VSA D+DS N ++ Y++ + GN FSIN G I T DRE+ + Y+ V A+D G P +S+ S+++ VLD ND P F K + + E N V + + DED N + Y I TS P+ NP G +++ ++RE+ V A D G + S VT+ + D+ND+ P F+ PS ++ + G L+ K+ A D D NG +F + ++S + G + +K+ ++ S H +R +V ASD+
Sbjct: 2294 SGQLKLIRTLDRE----TQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLFSSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGVITYSLSG-------GDGQF-------SINPATGQIITSSL-----LDRESRGNYQLLVVASDGGQPTPLSSSAMVSVVVTDINDNPPRFHHHPYVTHIPASTAPGSLVFAVTVTDEDSGSN--SQLHYSL------SGRNSEKFKIDPVRGAITASEKLTGSSEVTFTV--RVKDGGSNPKTDSTTVTVRFVTGGDFPIIKIKDKSFTYPENQAINTIVTKVSGTSTRAGPLSYYIASGNLDNAFHVDQ-LSGELSLK-------------------APLDYENIEKYVLWIEARDQSFPPYSAYEKIEITVLDVNDNNPVFEKEPFHAEILEN-LSPQRVLVVSALDQDSGPNGQLDYTIID-GNKENSFSINRATGEIRTTRPLDREKTAQYSLKVKATDRGAPQKSTAVSVVINVLDVNDNAPRFSKIFSATVPE---NAPVGYTVTRVTTTDEDTGANAVSRYTISDTSLPFSINP-------------STGDITISRPLNREDTDHYIAKVSAHDSG---WTVSTDVTIFVTDINDNAPRFSKPS----YYLEYPELTDVGSLVTKVSATDLDEGFNGK-IFYFIRSQSENFRINSSTGEIFVKQQLRYQNSTGHNNANINRHSFIVTASDR 2941 HSP 5 Score: 163.31 bits (412), Expect = 6.359e-40 Identity = 170/615 (27.64%), Postives = 267/615 (43.41%), Query Frame = 1
Query: 838 LKVIKKIDRE-TREKYSFTLVALDTEGKRGHVN---IVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLD--FKID--------TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLT--ISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIG-NIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRS---STASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFET--GYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
++ ++DRE + Y + A++TE + H + + ++DINDN P + +TV+E I L A DAD+ N I S D F+ID T +L R+ K + ++ DG Q ++D+T I++ D ND+ P S + S I E+ I+ + D D +N E +S +D Y L P G+ N + D E +Y + + +D G SS + VLD NDN P F S+Y I E+ S I +V+A D D NA++ YS+ +F I GV+ T++ DRE +S YN V +D P + STA + V +LD NDC P+F Q I E N AV + ++A D D N V Y +G + +F + +G + L G +DREE + + ++A D G+PPLS+++ VT+ + D+ND+ P F S + +I E T G + ++ A D D NG + F + S I+ VI + R R + S ++V+A+D+
Sbjct: 1671 IQTAMELDREHGADLYLLDVYAIETEASQPHTQRAEVEITLQDINDNPPIFPTDILDVTVQENVGDGFRIMQLTATDADEGPNALVTYTIISGADDSFRIDPESGDLIATKRLDRERRS------------------------KYSLLVRADDG---QQSSDMTVNITVSDVNDHTPKFSRSVYSFDIPEDMAPGSIVAAILASDSDSGVNGEITYSLEEDDGDYTFLLN------------PVTGVF-------NVTQPLDYETQQYYILTVRAVDGGG--QASSVRVYFNVLDVNDNRPAFNTSVYSTSISESLTPGSSILTVAASDADDGPNAQLSYSIASGDPQAHFGITTAGVLQTRKLLDRETQSFYNLVVTVNDMALPPATRFTSTAQVSVILLDVNDCPPVFTSQKMAYIQE---NTAVDTVVFTVQATDADSGPNSYVEYSLGGS----------YGVKFSID-NIDGSVRLVGELDREEMANYSLTIVATDKGQPPLSSTMDVTMMVLDVNDNTPSF------SQNIYDIEIEENTLSGTDVLQVFASDADEGTNGQIRFSIAAGNGNSDFRIDSVTGVISVAKLLDRETRASYS--LVVQAADR 2215 HSP 6 Score: 149.058 bits (375), Expect = 1.470e-35 Identity = 173/672 (25.74%), Postives = 291/672 (43.30%), Query Frame = 1
Query: 547 ISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMN--CEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKY---SLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESI 2529
+S SF L + D+ND P F + ++ I EDVP G I A+D DS + Y + + + + +I + + L +DRET + A D + K + +++NI D+ND P + Y ++ V+ E+ SL A D D N + F D ++L R+ I+ E + M L V + D G L + + +++KD NDN P+ A IKEN+ +T ++ D DL N ++ DT H+ + + +V++ DRE+ Y + + D G + + ++ V+D DN PIFT+ Y F + EN ++ IG++SA D N I Y S D+ G F++N G I DRE+++ Y V+A G+ + + +I VK D ND P F E V + N +++ +A D+D NG++ Y + NP F + K+G ++L G ++ S+ ++V+A D G P ++++ +TV++ D+ND+ PVF S V + SE K++A DKD LNG +V+++ G + I DG++ +K +
Sbjct: 434 VSRSSFA-SLVIFVNDINDHPPIFQEAVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVS------------GNSLGWFAISENSGLVTSAAL-----LDRETASVVVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFTQSSYHVSLVEHSPAGSELLSLSATDTD--LGANGTVRFTFDAETPATVQELFRLDTITGKLSTTTELDREDMGSYLLYV--RATDAGAPPLHSIAKVNVTLKDINDNRPVFYPVQYFANIKENEPPGSYVTTVSASDPDLGRNGTVRYTITAGDTFKFHINSNTGKITT---------LVLL-----------DREEKTAYQLQVSATDGGELRSHTHAIVTITVVDTQDNPPIFTQKEYSFVMFENVAPNTVIGTISASTVD--LNTNITYLIASGDQRG--LFAVNSATGHITATSLIDREEQAFYQLKVVAR-GGDVTGEALVNITVK--DLNDNAPHFLHSEEH--VSAVENWNTGHHIFQAKAFDQDEGTNGMIVYSLQ------QNPKG----LFHIH-EKHGLITLTGPLEV-TTSSYQVEVVASDRGVPQRTSTLILTVSVYDVNDNAPVF---DQLSYEVVILESEPVNSRFF-KVEATDKDSGLNGEIVYDITGGNTNDIFGIFPDGQLYIKADL 1038 HSP 7 Score: 149.058 bits (375), Expect = 1.832e-35 Identity = 187/741 (25.24%), Postives = 309/741 (41.70%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREE----LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH----VNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMA----EMKLVVPLKV--VDGGGLQNTTD--LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKS--FDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLA-KLDAEDKDYALNGSVVFEL 2460
+++++++ E+ P S + + A + + A R+ ++SGN I N +G + + +DRE + D IS+ I +T D+ND+VPTF + +S++E P G + A+D D G + + +T ++ F+ +I +L ++DRE Y + A D H VN+ L KDINDN P + + Y +KE + ++ A D D N G R ++ G + + E K L+V DGG L++ T +TI++ D DN P+ + S + EN ++ ++ DL N + D +RG+ + + + DRE+ FY + ++ +G +T ++ V D NDN+P F S +EN I A D+D N I YSL + F I+ +G+I + S Y V+ASD G P R+ST + V V D ND P+F + YE I+ES V++ +EA D+D NG + Y+I T N+ I +G+L + +DRE Q + ++ARD PLS S+ VT+ L+D+ND++P+F +++ E G L+A ++ AEDKD+ N V +
Sbjct: 459 AVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFAISEN--SGLVTSAALLDRETASVVVLNISAKDQGLQPKISYTKLIVNIT----DVNDQVPTFTQSSYHVSLVEHSPAGSELLSLSATDTDLGANGTVRFTFDAETPAT------VQELFRLDTITG--------KLSTTTELDREDMGSYLLYVRATDAGAPPLHSIAKVNVTL--KDINDNRPVFYPVQYFANIKENEPPGSYVTTVSASDPDLGRN--------------GTVRYTITAGDTFKFHINSNTGKITTLVLLDREEKTAYQLQVSATDGGELRSHTHAIVTITVVDTQDNPPIFTQKEYSFVMFENVAPNTVIGTISASTVDLNTNITYLIASGD---------------------QRGLFAVNSATGHITATSLIDREEQAFYQLKVVA--RGG-DVTGEALVNITVKDLNDNAPHFLHSEEHVSAVENWNTGHHIFQAKAFDQDEGTNGMIVYSLQQNPKGLFHIHEKHGLITLTGPLEVTTSS-YQVEVVASDRGVPQRTSTLILTVSVYDVNDNAPVFDQLSYEVVILES---EPVNSRFFKVEATDKDSGLNGEIVYDI--TGGNTND---------IFGIFPDGQLYIKADLDREVQDRYNLLLVARDRAVEPLSASVNVTIILDDVNDNRPLF----NSTNYVFRFMEEQPRGSLVARRVFAEDKDFGPNSEVRYSF 1120 HSP 8 Score: 144.436 bits (363), Expect = 3.758e-34 Identity = 184/644 (28.57%), Postives = 273/644 (42.39%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-IYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSIT---VTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
LT + D+ND P F + E+ ILE P+ A+D DS G Y DI D F QL + +DRE +++Y+ LVA D E VN+ + + D+NDN P + Y E + + + F D NS++ + +T + N + +SS + E ++ + D G L++ + + I+D NDNAP + A I E+ + L ++ D D N + H+++ E S+ + + G V + D E YS+ II D GS L+SS SV VLDENDNSP F+KS +I+EN + S++A D DS NA I YS+ N FSI+ G IF K D E +SLY + A DNG P RSS+ +++ V D ND P+F F + N+ + ++ I A+D D D NG + Y I +P N+ F + +G + G IDRE + + V A D P +TV + D NDH P F S + + + G +L + A D D NG V +ELV +S
Sbjct: 962 LTVSVYDVNDNAPVFDQLSYEVVILESEPVNSRFFKVEATDKDSGLNGEIVY---------DITGGNTNDIFGI---------FPDGQLYIKADLDREVQDRYNLLLVARDRAVEPLSASVNVTIILDDVNDNRPLFNSTNYVFRFMEEQPRGSLVARRVFAEDKDFGPNSEVRYSFETPQ-PNFELNAITGELSSTLQMDRESLMRQRGAAVFTFTVISSDQGLPKPLKDQAKVQVYIQDINDNAPKFTKDIYQASISESAPNMTQLLRVSASDVDENKNGQVRYHISEG-----NEETQFSIDSSS-----GQVTLV-------GKLDYEATSSYSLKIIAEDSGSVPLSSSCLLSVSVLDENDNSPSFSKSSMSVDILENMRIGELVVSITATDSDSGSNADITYSIMANNNHGTFSISPSTGSIFLVRKLDYETQSLYKLNITAKDNGRPPRSSSIPLVIHVRDFNDNPPVFTPGDIFKSIPE--NLPLSTSIMTITAHDTDADINGELEYSIVQQTPRGNH--------FSIDPI-SGIIFSNGQIDREFSNLFELTVKATDQAVPAEFRKFALKNITVWVTDQNDHVPNFI-----SQNALVAEANIVIGSILTTVMAFDPDEGANGEVEYELVKGDS 1553 HSP 9 Score: 140.969 bits (354), Expect = 4.714e-33 Identity = 190/768 (24.74%), Postives = 306/768 (39.84%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGN-VRLRNLIQLNFVTGSLHLISSVDREE----LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII---YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESY--GNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREE------QSTIYIDVIARDHGKP-PLSNSITVTVTLNDLNDHKPVFT---FPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV-GNESLSPVTIEKDGRVIL 2517
+ S + + L E+ P SEL++L A RF + ++ L +L+ +TG L + +DRE+ L + D + S I ++ + D+ND P F + +I E+ P G + ASD D + G Y I D FKF + ++ + +DRE + Y + A D R H + ++ I D DN P + Y + E + + D +N+ + + I + G+ R L + + + + A +L V V GG + + I++KD NDNAP + EN T + D+D N +S N H+ E K G++ + ++ T+ Y V ++ D+G PQ TS+ +V V D NDN+P+F + YE I+E+ +S V A DKDS N +I Y + GN F I G ++ K DRE + YN ++A D S++ ++ + + D ND +P+F Y F +E G++ + A D+D N V Y P F++ G+LS +DRE + VI+ D G P PL + V V + D+ND+ P FT + +S S S N++ L ++ A D D NG V + + GNE G+V L
Sbjct: 562 TQSSYHVSLVEHSPAGSELLSLSATDTDLGANGTVRFTFDAETPATVQELFRLDTITGKLSTTTELDREDMGSYLLYVRATDAGAPPLHS----IAKVNVTLKDINDNRPVFYPVQYFANIKENEPPGSYVTTVSASDPDLGRNGTVRYTITA------------GDTFKF------HINSNTGKITTLVLLDREEKTAYQLQVSATDGGELRSHTHAIVTITVVDTQDNPPIFTQKEYSFVMFENVAPNTVIGTISASTVD---LNTNITYLIAS---GDQRGLFAVNSATGHITATSLIDREEQAFYQLKV---VARGGDVTGEALVNITVKDLNDNAPHFLHSEEHVSAVENWNTGHHIFQAKAFDQDEGTNGMIVYSLQQNPKGLFHIHE-------------KHGLITLTGPLEVTTSS-----------YQVEVVASDRGVPQRTSTLILTVSVYDVNDNAPVFDQLSYEVVILESEPVNSRFFKVEATDKDSGLNGEIVYDITG-GNTNDIFGIFPDGQLYIKADLDREVQDRYNLLLVARDRAVEPLSASVNVTIILDDVNDNRPLFNSTNYVFRFMEEQPRGSLVARR----VFAEDKDFGPNSEVRYSFETPQP-----------NFELNAI-TGELSSTLQMDRESLMRQRGAAVFTFTVISSDQGLPKPLKDQAKVQVYIQDINDNAPKFTKDIYQASISESAPNMTQ-------LLRVSASDVDENKNGQVRYHISEGNEETQFSIDSSSGQVTL 1250 HSP 10 Score: 139.043 bits (349), Expect = 1.793e-32 Identity = 165/586 (28.16%), Postives = 266/586 (45.39%), Query Frame = 1
Query: 571 ELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK---RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTS-REIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLE--ILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSR-SSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTV 2295
+++ +++D+ND P F Q++ I E+ + V+ A+D DS Y + + KFS + I ++++ ++DRE YS T+VA D +G+ +++ + + D+NDN+P + Y I ++E T S ++ + A DAD+ N ++ F I A GNS + + L++ + A LVV + D G T++I D ND AP+ ++ + +++EN L IL ++ +D+D N + +S SLS NE + Q++ ++ DRE D YS++I ID GSP L+ S V+V D ND P+F+ S + I E++ S++ V+A D D +N I YSL G+ FSIN G I T DRE + Y V+ASD G+P+ SS+A + V V D ND P F Y +I S A + + + DED N + Y + N + K + IT + KL+ S + V +D G P ++S TVTV
Sbjct: 2017 QVSVILLDVNDCPPVFTSQKMAY-IQENTAVDTVVFTVQATDADSGPNSYVEYSLGGSYG------------VKFS------IDNIDGSVRLVGELDREEMANYSLTIVATD-KGQPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEENTLSGTDVLQVFASDADE--GTNGQIRFSI-AAGNGNSDFRIDSVTGVISVAKLLDRETR--ASYSLVV--QAADRGSSPRVDRATVNIVLLDVNDCAPVFELSPYTVRVQENLADLPKNILQVVG-RDDDYGSNGQ----------------LSYSLSGGNEDAAFSLTSSGQLKLI--RTLDRETQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLFSSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGVITYSLSG-GDGQFSINPATGQIITSSLLDRESRGNYQLLVVASDGGQPTPLSSSAMVSVVVTDINDNPPRFHHHPYVTHIPAS---TAPGSLVFAVTVTDEDSGSNSQLHYSLSG-----RNSEKFKIDPVRGAITASEKLT--------GSSEVTFTVRVKDGGSNPKTDSTTVTV 2539 HSP 11 Score: 134.806 bits (338), Expect = 3.428e-31 Identity = 120/439 (27.33%), Postives = 195/439 (44.42%), Query Frame = 1
Query: 1255 TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTK-NERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYG----NMAVHNNLGLIEANDEDLDE-NGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSL---YGVIDREEQSTIYIDVIARDHGKPPLSNSI-TVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSR 2538
T++ I + D NDN+P+ TS KE+ + + + T D D+ N ++ TTY ++ R P ++ + T DRE FY +LI DKG P+ Q +V + D NDN P F Y+ + E++ S + ++A D+D N+ I+Y LDE F I+ G + KE D E K Y+ T+ A DNG PS S +K+LD ND P+ + +Y F + N + + L+ +D D NG + I + F+V + LSL V+DRE S+ + V D+G+P +S ++ + +ND+NDH P+F + V+IS + G + + A D D N ++ + LV SL I ++ ++ ++ R
Sbjct: 107 TEVRIVVLDINDNSPVFPDTSIVVSFKEDATSGRQVILDTATDADIGSN-----GVDHTTYRIVQGNEQRKFRLDITVNPSGEGAFLHLVTTG---GLDRELAPFYQLLIEVEDKGEPKRYGYLQVNVTIQDINDNPPAFDLDQYQTSVYEDAAIGSSVLQITATDQDEGANSDIRYFLDE--GTPFQIDPKAGTVVIKEALDYEVKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRY-FPTTSKFASVDENAQIGTVVALLTVSDSDSSSANGNISVSILG---------GNEQGHFEVHTSPVPNLSLIKVASVLDRERISSYNLTVSVSDNGRPVSRSSFASLVIFVNDINDHPPIF----QEAVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFAISENSGLVTSAALLDR 521 HSP 12 Score: 122.865 bits (307), Expect = 1.458e-27 Identity = 158/613 (25.77%), Postives = 268/613 (43.72%), Query Frame = 1
Query: 856 IDRETREKYSFTLVALDTEGK-RGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL-----KGMAEMKLV----VPLKVVDGGGLQ--NTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPI-----FTKSIYEFEIMENSVGSSEIGSVSAPDKDSQE-NAKIKYSL---DEIGNIYFSINMYGV-----IFTKEKFDREQKSLYNFTVIASDNGEP-SRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDR-------ILVRASD 2586
IDRE+ +V L ++ V IV + DINDNSP + ++ KE T+ R++ A DAD +N ++I GN ++ R+ + + EGA G + +L + ++V D G + + ++I+D NDN P + + E+ + +T D+D N + L++ T + PK G V+I ++ D E YS+ I +D G P L+ + ++ +LD NDN P+ F + + EN+ + + ++ D DS N I S+ +E G +F ++ V I DRE+ S YN TV SDNG P SRSS AS+++ V D ND PIF++ Y+ +I E ++ + + + A D D +N + Y + + F + +G ++ ++DRE S + +++ A+D G P + + V + D+ND P FT S V++ G L L A D D NG+V F ++ +P T+++ R+ ++I + T+ DR + VRA+D
Sbjct: 84 IDRESLASSVINVVVLSSQPTYPTEVRIV--VLDINDNSPVFPDTSIVVSFKEDATSGRQVILDTATDADIGSNGVDHTTYRI---VQGNEQRKFRLDITVNPSG---EGAFLHLVTTGGLDRELAPFYQLLIEVEDKGEPKRYGYLQVNVTIQDINDNPPAFDLDQYQTSVYEDAAIGSSVLQITATDQDEGANSDIRYFLDEGTPFQID-------------PKAGTVVI-------KEALDYEVKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSSSANGNISVSILGGNEQG--HFEVHTSPVPNLSLIKVASVLDRERISSYNLTVSVSDNGRPVSRSSFASLVIFVNDINDHPPIFQEAVYKVDISE---DVPKGSYIKGVSATDGDSGQNANLRYSLVS---------GNSLGWFAIS-ENSGLVTSAALLDRETASVVVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFT----QSSYHVSLVEHSPAGSELLSLSATDTDLGANGTVRFTF---DAETPATVQELFRL---DTITGKLSTTTELDREDMGSYLLYVRATD 643 HSP 13 Score: 119.398 bits (298), Expect = 1.631e-26 Identity = 152/597 (25.46%), Postives = 250/597 (41.88%), Query Frame = 1
Query: 835 QLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYN--------FTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEAND-EDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDA--EDKDYALNGSVVFEL-VGNESLSPVTIEKDGRVILKESI---KSRSH--RITQSD 2562
+L + +D E EKY + A D + I + + D+NDN+P + P+ + E + + + + A D D + N +LD+ I GN I + + A+ L V K D G Q +T +++ I D NDNAP S SA + EN +T +T DED N ++DT+ + S++ P G + I ++ +RE D Y + D G T S ++ V D NDN+P F+K Y E E + S + VSA D D N KI Y + + + G IF K++ + + +N F V ASD G S +++V ++D ND P F F V ++ V NL + A+D +D N + Y I + +F++ + G +++ + + +++ A+D G P LS+ T+ + + + N H P F S S +S G + L A +DKD +NG + + + GN+ V EK G + L + + K + H RI+ +D
Sbjct: 2603 ELSLKAPLDYENIEKYVLWIEARDQSFPPYSAYEKIEITVLDVNDNNPVFEKEPFHAEILENLSPQRVLVVSALDQD--SGPNGQLDYTIID---GNKENSFSINRATGEIRTTRPLDREKTAQYSLKV--KATDRGAPQKSTAVSVVINVLDVNDNAPRFSKI-FSATVPENAPVGYTVTRVTTTDEDTGANAVSRYTISDTS-------LPFSIN-----PSTGDITI-------SRPLNREDTDHYIAKVSAHDSG---WTVSTDVTIFVTDINDNAPRFSKPSYYLEYPELTDVGSLVTKVSATDLDEGFNGKIFYFIRSQSENFRINSSTGEIFVKQQLRYQNSTGHNNANINRHSFIVTASDRGIKPLMSETTVIVNIVDSNDNPPTFESSSYFTPVTK--SVKVGTNLIKVTAHDKKDFGVNSEIEYVISG---------GNSSSKFRLD-KQTGWVTVASSLTSDINKVYLLEITAKDKGNPVLSDKATLKIAVTEENHHTPEF----SQSQVIAAVSESLTVGTAIRTLSARDKDKDKQMNGLITYNISSGNDDGLFVVNEKTGVLSLAKPLDYEKKQKHELRISATD 3153 HSP 14 Score: 113.235 bits (282), Expect = 1.207e-24 Identity = 135/565 (23.89%), Postives = 237/565 (41.95%), Query Frame = 1
Query: 439 NLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISF--GSFIFELTFLII-----DMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKK---IDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT----TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQI-ETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQEN-AKIKYSLDEIGN--IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDL 2073
L +N TG L L +D E+ +QK H + IS G +I + +++ + D+ND P F E + E+VP G ++ A+D DS + +Y I++ D ++ II P VI +D E ++ Y T+ A + E + N+ + +K N+ P+++ Y V E + + F +D + + + I G SR+ + + + + G L E K+ + + + G ++ + I+I D ND P+ + ++ E ++T ++ +D D + + S +R K I Q + + DRE Y++ ++ ID GSP T + V + D NDN P + E+MEN + + ++++ D D N YSL G+ YF++ G + T + DREQ S + +V+ D+G P SST ++ VK+ DQND P + E V +GNM +LG+++ D D+
Sbjct: 3120 GLFVVNEKTGVLSLAKPLDYEK--KQK-----HELRISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQENVPSGTIVVKLNATDKDSSSNSVMAYVIQS---------------------SDSDLFIIDPNTGVITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTMVG-EVFASDRDLGDDGVVYYLI----FGRSRRKGFGINKKTGQIYVT-GPLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSEGLSPGGLVTFVSAEDSD-----------------SVPSWSRFTYSVTTDREKNAFTINPQTGQVSVAAELDRETTPVYNLTLLAIDSGSPAATGTATLIVTLEDINDNGPTLVTTT--GEVMENQRAGTPVMTLNSVDPDLAPNQGPFSYSLLSTGSAVTYFTLTSSGELSTSREIDREQISDFYLSVVIKDSGVPQMSSTGTVHVKINDQND-NPSQPRSVEI-FVHYFGNMFPGGSLGIVKPQDPDI 3628 HSP 15 Score: 110.923 bits (276), Expect = 6.310e-24 Identity = 174/722 (24.10%), Postives = 300/722 (41.55%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETR--EKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESY--GNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHG--KPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
S +F + EN P+ + + A R+ I ++ +N TG + + ++RE+ +H S + ++T + D+ND P F+K L E +G ++ A+DLD G KI + +S +E F I ++ QL+ ++SF + A D K +++NI D NDN P + Y V K + + A D D +NS++++ I GNS R+ + + +L ++ + D G L + L I++ + N + P S + A + E+ + L+ +D+D + +N ++ L NE K G++ + K D EK + + I D G TS ++ V D NDN P+F Y + EN + + ++A DKDS N+ + Y + + F I+ GVI T+ D E K +Y+ TV A + + R S A++ +++ N+ P F KQY F + E+ G M +G + A+D DL ++G+V+Y I S + K F + K G++ + G +DRE++ I + V+A++ G + + + V +T+ D ND PVFT V +S G L+ + AED D
Sbjct: 2757 SKIFSATVPENAPVGYTVTRVTTTDEDTGANAVSRYTISDTSLPF----SINPSTGDITISRPLNREDTDHYIAKVSAHD---SGWTVSTDVTIFVTDINDNAPRFSKPSYYLEYPELTDVGSLVTKVSATDLDEGFNG----KIFYFIRS---QSENFRINSSTGEI------FVKQQLRYQNSTGHNNANINRHSFIVTASDRGIKPLMSETTVIVNIVDSNDNPPTFESSSYFTPVTKSVKVGTNLIKVTAHDKKD-FGVNSEIEYVISG---GNSSSKFRLDKQTGWVTVAS--SLTSDINKVYLLEITAKDKGNPVLSDKATLKIAVTEENHHTPEFSQSQVIAAVSESLTVGTAIRTLSARDKDKDK------QMNGLITYNISSGNDDGLFVVNE--KTGVLSLA-------KPLDYEKKQKHELRISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQENVPSGTIVVKLNATDKDSSSNSVMAYVIQSSDSDLFIIDPNTGVITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTM-----VGEVFASDRDLGDDGVVYYLIFGRS---------RRKGFGIN-KKTGQIYVTGPLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFT----QELYDVQVSEGLSPGGLVTFVSAEDSD 3417 HSP 16 Score: 97.0561 bits (240), Expect = 1.167e-19 Identity = 167/742 (22.51%), Postives = 295/742 (39.76%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREE------LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLP------VASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDAD-DQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER-----PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNG 2442
S ++++IE++EN ++++ + A + RF I +GN + +++ VTG + + +DRE + Q D S V + + +++D+ND P F + + E+ + DLP V D D G SY + + + F +S QLK+I+ +DRET+++YS + A+D+ G +++ + D+ND P + + ++ E T ++ + A D D QN + + + + G+ + L++ +G ++ +V DGG L ++ +++ + D NDN P I + ++ +TV DED N + LH SLS +N P RG + T K +V F + D GS T S +V + D PI F EN ++ + VS S + Y + + N + + G + K D E Y + A D P S+ I + VLD ND P+F K+ + I+E N++ L ++ A D+D NG + Y I D K F + G++ +DRE+ + + V A D G P S +++V + + D+ND+ P F+ SA+ + GY + ++ D+D N
Sbjct: 2136 SQNIYDIEIEENTLSGTDVLQVFASDADEGTNGQIRFSIAAGNG--NSDFRIDSVTGVISVAKLLDRETRASYSLVVQAADRGSSPRVDRA------TVNIVLLDVNDCAPVFELSPYTVRVQEN-----LADLPKNILQVVGRDDDYGSNGQLSYSLSGGNE---------DAAFSLTS---------SGQLKLIRTLDRETQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLFSSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGV---ITYSLSG---GDGQFSINPATGQIITSSLLDRESRGNYQLLVVAS----DGGQPTPLSSSAMVSVVVTDINDNPPRFHHHPYVTHIPASTAPGSLVFAVTVTDEDSGSNSQ----------LHY------SLSGRNSEKFKIDPVRGAI------TASEKLTGSSEVTF---TVRVKDGGSNPKTDSTTVTVRFVTGGD-FPIIKIKDKSFTYPENQAINTIVTKVSG---TSTRAGPLSYYIASGNLDNAFHVDQLSGELSLKAPLDYENIEKYVLWIEARDQSFPPYSAYEKIEITVLDVNDNNPVFEKEPFHAEILE---NLSPQRVL-VVSALDQDSGPNGQLDYTI---------IDGNKENSFSIN-RATGEIRTTRPLDREKTAQYSLKVKATDRGAPQKSTAVSVVINVLDVNDNAPRFSKIFSAT-----VPENAPVGYTVTRVTTTDEDTGANA 2788 HSP 17 Score: 93.9745 bits (232), Expect = 1.071e-18 Identity = 162/747 (21.69%), Postives = 311/747 (41.63%), Query Frame = 1
Query: 328 ENKPIHSELI-NLKAK---LPTAFKE-----AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQ---LKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFS-LKAFDADDQNNINSKL---------DFKID--TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDE-DLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER--PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSA--PDKDSQENAKIKYSLDEIGN--IYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSP--YVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVG 2466
E +P H+E++ NL + + +A + + + II GN N +N TG + +DRE+ Q + S + ++D+ND P F+K ++ E+ P+G+ + +D D+ ++ Y I + FS I P + + + ++RE + Y + A D+ G ++ + + DINDN+P++ Y + E T + + + A D D+ N K+ +F+I+ T ++ ++L NN + + A + + PL + T + ++I D NDN P +S + ++ + L +T D+ D +N E ++ V+S S+ R + G V + T+ D KV Y + I DKG+P L+ + V +EN ++P F++S + E+ + I ++SA DKD Q N I Y++ GN F +N GV+ + D E+K + + A+D G +++S ++ ++V D ND P+F F +V+ N+ + + A D+D N ++ Y I ++ ++ +P+ G ++ G +D E + ++ V A + + V + L N++ P F + + +S G ++ ++ A D+D +G V + + G
Sbjct: 2653 EKEPFHAEILENLSPQRVLVVSALDQDSGPNGQLDYTIIDGN--KENSFSINRATGEIRTTRPLDREKTAQYSLKVKATDRGAPQKSTAVSVVINVLDVNDNAPRFSKI-FSATVPENAPVGYTVTRVTTTDEDTGANAVSRYTIS-------------DTSLPFS---------INPSTGDITISRPLNREDTDHYIAKVSAHDS-GWTVSTDVTIFVTDINDNAPRFSKPSYYLEYPELTDVGSLVTKVSATDLDE--GFNGKIFYFIRSQSENFRINSSTGEIFVKQQLRYQNSTGHNNANINRHSFIVTASDRGIKPL--------MSETTVIVNIVDSNDNPPTFESSSYFTPVTKSVKVGTNLIKVTAHDKKDFGVNSE------------IEYVISGGNSSSKFRLDKQTGWVTVASSLTS-----DINKV--YLLEITAKDKGNPVLSDKATLKIAVTEENHHTPEFSQSQVIAAVSESLTVGTAIRTLSARDKDKDKQMNGLITYNISS-GNDDGLFVVNEKTGVLSLAKPLDYEKKQKHELRISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQE--NVPSGTIVVKLNATDKDSSSNSVMAYVIQSSDSDLFIIDPNT-------------GVITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFV----SKQYYFEVSEAAPKGTMVGEVFASDRDLGDDGVVYYLIFG 3324 HSP 18 Score: 90.8929 bits (224), Expect = 7.696e-18 Identity = 80/270 (29.63%), Postives = 134/270 (49.63%), Query Frame = 1
Query: 1543 FDREKVDFYSVLIICIDKGSPQLTSSQQF--SVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQEN-AKIKYSL--DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGL----IEANDEDLDEN-GLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDH 2319
DREK + S+ ++ + GS + + ++ +LD ND P+FT+ +Y+ ++ E + VSA D DS + ++ YS+ D N F+IN G + + DRE +YN T++A D+G P+ + TA+++V + D ND P +V + G + + G + + D DL N G Y + +T V +T +G+LS IDRE+ S Y+ V+ +D G P +S++ TV V +ND ND+
Sbjct: 3346 LDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSEGLSPGGLVTFVSAEDSDSVPSWSRFTYSVTTDREKNA-FTINPQTGQVSVAAELDRETTPVYNLTLLAIDSGSPAATGTATLIVTLEDINDNGP--------TLVTTTGEVMENQRAGTPVMTLNSVDPDLAPNQGPFSYSLLSTGSAVT----------YFTLTSSGELSTSREIDREQISDFYLSVVIKDSGVPQMSSTGTVHVKINDQNDN 3595 HSP 19 Score: 82.8037 bits (203), Expect = 2.389e-15 Identity = 167/759 (22.00%), Postives = 313/759 (41.24%), Query Frame = 1
Query: 307 LFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWI-GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG----GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTL-EILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-------DEIGNIYFSINMYGVIFTKEKFDREQKS---LYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG------LIEANDEDLDENGLVWYEI--GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES-----LSPVT 2490
+++ + E+ P ++L+ + A K + R+ I GN + ++ +G + L+ +D E + S L+ ++D ND P+F+K + + ILE++ IG ++ A+D DS +Y IM F S + +++K+D ET+ Y + A D + + +V++++D NDN P + G +K + S I ++ A D D +IN +L++ I + + + I+ + E+ + + V L+N +T+ + D ND+ P + S++A + E + ILT + D D N E L V S + +R + + Q+ ++ YS+ + D G+ + TS + ++I+ + + P+F++ Y + E + + S+ A K++Y + +G ++ GVI T + DRE + L + I ++ +P + A + + + D ND PIF +I++ + V N+G + A D D N LV Y I GA + +P++ G L +DRE +S + V A D + S+ +TV +T++D+NDH P F S + SF +I + G ++A + A D D +NG + + L ++ L+PVT
Sbjct: 1195 IYQASISESAPNMTQLLRVSASDVDENKNGQVRYHISEGNEETQ--FSIDSSSGQVTLVGKLDYEATSSYSLKIIAEDSGSVPLSSSCLLSVSVLDENDNSPSFSKSSMSVDILENMRIGELVVSITATDSDSGSNADITYS---------IMANNNHGTFSISPSTG--------SIFLVRKLDYETQSLYKLNITAKDNGRPPRSSSIPLVIHVRDFNDNPPVFTPGDIFKSIPENLPLSTSIMTITAHDTD--ADINGELEYSIVQQTPRGNHFSIDPISGIIFSNGQIDREFSNLFELTVKATDQAVPAEFRKFALKN---ITVWVTDQNDHVP--NFISQNALVAEANIVIGSILTTVMAFDPDEGANGEVEYEL----------VKGDSDTFIMDRYSGDIRVASQLVPSKL---------IYSLTVSATDHGTDRKTSRTELTIIL--QGTDGPVFSQPKYITILKEGQPPGTNVISLDA-SSPRGTGTKVEYFIVSVRSGGKAVGRLFTIGRHTGVIQTAMELDREHGADLYLLDVYAIETEASQP-HTQRAEVEITLQDINDNPPIFPT----DILD----VTVQENVGDGFRIMQLTATDADEGPNALVTYTIISGADDSFRIDPES-------------GDLIATKRLDRERRSKYSLLVRADDGQQ---SSDMTVNITVSDVNDHTPKF---SRSVYSF-DIPEDMAPGSIVAAILASDSDSGVNGEITYSLEEDDGDYTFLLNPVT 1876 HSP 20 Score: 73.1738 bits (178), Expect = 1.916e-12 Identity = 162/732 (22.13%), Postives = 287/732 (39.21%), Query Frame = 1
Query: 448 QLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFI-------FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSRE-IFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSP---QLTSSQQFSVIVLDENDNSPIFTKS---IYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIY-IDVIA-RDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+LN +TG L +DRE L +Q+ +IS + ++ I D+ND P F K + SI E P + ASD+D K G Y I + T F S Q+ ++ K+D E YS ++A D+ + +++ D NDNSP + + + E E + S+ A D+D + N+ + + I N+ I + + ++ + + + KL + K ++ L I ++D NDN P+ + I EN + +T D D ++N E + T S P G++ N DRE + + + + D+ P + + + +V V D+ND+ P F + E I+ S+ + +V A D D N +++Y L + + F ++ Y G I + K +Y+ TV A+D+G R ++ + L +L D P+F + I++ N+ ++A+ + ++ + S + R G + +DRE + +Y +DV A P + V +TL D+ND+ P+ FP+ V + G+ + +L A D D N V + ++ S + G +I + + R R S +LVRA D
Sbjct: 1128 ELNAITGELSSTLQMDRESLMRQRGAAVFTFTVISSDQGLPKPLKDQAKVQVYIQDINDNAPKFTKDIYQASISESAPNMTQLLRVSASDVDENKNGQVRYHISEGNEETQ---------FSIDSSSG--------QVTLVGKLDYEATSSYSLKIIAEDSGSVPLSSSCLLSVSVLDENDNSPSFSKSSMSVDILENMRIGELVVSITATDSDSGS--NADITYSI---MANNNHGTFSISPSTGSIFLVRKLDYETQSLYKLNITAKDNGRPPRSSSIPLVIHVRDFNDNPPVFTPGDIFKSIPENLPLSTSIMTITAHDTDADINGELEYSIVQQT------PRGNHFSID---PISGIIF-------SNGQIDREFSNLFELTVKATDQAVPAEFRKFALKNITVWVTDQNDHVPNFISQNALVAEANIVIGSI----LTTVMAFDPDEGANGEVEYELVKGDSDTFIMDRYSGDIRVASQL-VPSKLIYSLTVSATDHGT-DRKTSRTELTIILQGTD-GPVFSQPKYITILKE--GQPPGTNVISLDASSPRGTGTKVEYFIVSVRS------GGKAVGRLFTIGRHTGVIQTAMELDREHGADLYLLDVYAIETEASQPHTQRAEVEITLQDINDNPPI--FPTDILD--VTVQENVGDGFRIMQLTATDADEGPNALVTYTIISGADDSFRIDPESGDLIATKRLD-RERRSKYS--LLVRADD 1799 HSP 21 Score: 71.633 bits (174), Expect = 6.388e-12 Identity = 111/516 (21.51%), Postives = 204/516 (39.53%), Query Frame = 1
Query: 1219 LKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER-----PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILV--KVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALN-GSVVFELVGNES-LSPVTIEKDG-----RVILKESIK----------SRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNG 2679
+ DGG + T+ +T++I+ D NDN P+ ++EN + I+ L D+D N VM+ + + + P G++ D E Y + + + + S ++ + N+ P F Y FE+ E + + +G V A D+D ++ + Y + F IN G I+ DRE++ + V+A + G + + V +LD ND P+F ++ Y+ + E ++ + + A D D + W Y D EK F + + G++S+ +DRE + ++A D G P + + T+ VTL D+ND+ P + +G + G + L++ D D A N G + L+ S ++ T+ G R I +E I S +++ + + V+ +DQ +N Q + + Y+ N +P G
Sbjct: 3149 ISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQENVPSGTIVVKLNATDKDSSSN----------------SVMAYVIQSSDSDLFIIDPNTGVITTQGF-------LDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTMVGEVFASDRDLGDDGVVYYLIFGRSRRKGFGINKKTGQIYVTGPLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSE---GLSPGGLVTFVSAEDSDSVPS---WSRF----TYSVTTDREKNA-FTIN-PQTGQVSVAAELDRETTPVYNLTLLAIDSGSPAATGTATLIVTLEDINDNGPTLV---TTTG---EVMENQRAGTPVMTLNSVDPDLAPNQGPFSYSLLSTGSAVTYFTLTSSGELSTSREIDREQISDFYLSVVIKDSGVPQMSSTGTVHVKINDQNDNPSQPRSVEIFVHYFG------NMFPGG 3616
BLAST of Protocadherin-1 vs. Ensembl Cavefish
Match: ENSAMXT00000031516.1 (FAT atypical cadherin 4 [Source:NCBI gene;Acc:103037566]) HSP 1 Score: 207.608 bits (527), Expect = 1.605e-53 Identity = 187/684 (27.34%), Postives = 316/684 (46.20%), Query Frame = 1
Query: 586 IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNI---------NSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLK-EVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEI-GNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE---SLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+ D+ND P F++ I ED+ G ++ +ASD DS G +Y +E ED ++ + + + V + +D ET++ Y T+ A+D G+ V + N+ D+NDN P + Y ++ E T I ++ A DADD N + + F I TA + +RKL S NL++ + +M L + +T +++ + D ND P+ + + + A I+EN ++ + D D N L + + + + S+ E DRE++ YS+ I+ DKG P L+S+ +++VLD NDN+P F+++IY+ EI EN++ +++ V A D D N +I++S+ GN F I+ + GVI + DRE ++ Y+ V A+D G R A++ + +LD NDC P+F Y + E+ ++ N+ + D+D NG + Y + N DA +T +G+L L +DRE Q + + A D G P LS S TV V ++D+ND P+F S+S +I+ + TG + ++A D D NG + + L G + S++P T + I+ S+ R R + ++LV ASD
Sbjct: 1812 VSDVNDHTPKFSRSVYSFDIPEDMAPGSIVAAILASDSDSGVNGEITYSLE-------------EDDGDYTFL----LNPVTGVFNVTQPLDYETQQYYILTVRAVDGGGQASSVRVYFNVLDVNDNRPAFNTSVYSTSISESLTPGSSILTVAASDADDGPNAQLSYSIASGDPQAHFGITTAGVLQTRKLLDRETQSFYNLVVT------VNDMALPPATR------FTSTAQVSVILLDVNDCPPVFT-SQKMAYIQENTAVDTVVFTVQATDADSGPNSYVEYSLGGSYGVKFSIDNIDGSVRLVGE-------------------LDREEMANYSLTIVATDKGQPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEENTLSGTDVLQVFASDADEGTNGQIRFSIAAGNGNSDFRIDSVTGVISVAKLLDRETRASYSLVVQAADRGSSPRVDRATVNIVLLDVNDCAPVFELSPYTVRVQENLADLP--KNILQVVGRDDDYGSNGQLSYSLSG-----GNEDA------AFSLTSSGQLKLIRTLDRETQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLF----SSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGVITYSLSGGDGQFSINPATGQ-----IITSSLLDRESR--GNYQLLVVASD 2422 HSP 2 Score: 188.734 bits (478), Expect = 1.224e-47 Identity = 192/707 (27.16%), Postives = 311/707 (43.99%), Query Frame = 1
Query: 442 LIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGI--ASYKI-----ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-TEGKR-GHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISI-----TSRSAKIKENKRTLEILTILTVKDED-LEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSS-QQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI-YFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESL 2478
L +N TG ++ S +DRE L N +V+ S ++ E+ +++D+ND P F I +S ED G + L A+D D G+ +Y+I + F+ + E F L +DRE Y + D E KR G++ + + I+DINDN P + Y+ +V E + + A D D+ N ++ F+ID K G ++I+ AL + + + + VD G L T+ TI + D NDN P++ TS+ A + EN + ++ +LTV D D N S + EV + + P ++ + + DRE++ Y++ + D G P SS + V D ND+ PIF +++Y+ +I E+ S I VSA D DS +NA ++YSL ++ +F+I+ G++ + DRE S+ + A D G + S ++V + D ND P F + Y ++VE + + L + A D DL NG V + A +P A + F++ T GKLS +DRE+ + + V A D G PPL + V VTL D+ND++PVF +P F NI G + + A D D NG+V + + ++
Sbjct: 68 LFAINATTGVVYTSSVIDRESLASSVIN---VVVLSSQPTYPTEVRIVVLDINDNSPVFPDTSIVVSFKEDATSGRQVILDTATDADIGSNGVDHTTYRIVQGNEQRKFRLDITVNPSGEGAFL--------------HLVTTGGLDRELAPFYQLLIEVEDKGEPKRYGYLQVNVTIQDINDNPPAFDLDQYQTSVYEDAAIGSSVLQITATDQDEGANSDIRYFLDEGTPFQID-PKAGT---------------VVIKEALDYEVKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSSSANGNISVSILGGNEQGHFEVHTSPV------PNLSLIKVASV-------LDRERISSYNLTVSVSDNGRPVSRSSFASLVIFVNDINDHPPIFQEAVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFAISENSGLVTSAALLDRETASVVVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFTQSSYHVSLVE---HSPAGSELLSLSATDTDLGANGTVRFTFDAETP------ATVQELFRLD-TITGKLSTTTELDREDMGSYLLYVRATDAGAPPLHSIAKVNVTLKDINDNRPVF-YPVQY---FANIKENEPPGSYVTTVSASDPDLGRNGTVRYTITAGDTF 714 HSP 3 Score: 176.022 bits (445), Expect = 8.615e-44 Identity = 181/748 (24.20%), Postives = 323/748 (43.18%), Query Frame = 1
Query: 322 LKENKPIHSELINLKAKLPTAFKEAKHRFVII--SGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFI--FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQ---LKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSP---QLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSI-NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESI 2529
LKE +P + +I+L A P F++ SG + L + TG + +DRE D I + E+ + D+ND P F +++++ E+V G I A+D D + +Y I +D F+ I P+ L K++DRE R KYS LV D + + + + + D+ND++P++ Y + E I + +D + +N ++ + ++ L + + L + ++ ++ VDGGG ++ + ++ D NDN P + + S I E+ + + D D N + +S S+++ + + G+ ++T K DRE FY++++ D P + TS+ Q SVI+LD ND P+FT + I EN+ + + +V A D DS N+ ++YSL + FSI N+ G + + DRE+ + Y+ T++A+D G+P SST + + VLD ND P F + Y+ I E N ++ + A+D D NG + + I A + N D F++ + G +S+ ++DRE +++ + V A D G P + TV + L D+ND PVF N++ + + ++ D DY NG + + L G + ++ G++ L ++
Sbjct: 1619 LKEGQPPGTNVISLDASSPRGTGTKVEYFIVSVRSGGKAVGRLFTIGRHTGVIQTAMELDREHGADLYLLDVYAIETEASQPHTQRAEVEITLQDINDNPPIFPTDILDVTVQENVGDGFRIMQLTATDADEGPNALVTYTI----------ISGADDSFR-----------IDPESGDLIATKRLDRERRSKYSL-LVRADDGQQSSDMTVNITVSDVNDHTPKFSRSVYSFDIPEDMAPGSIVA-AILASDSDSGVNGEITYSLE-----EDDGDYTFLLNPVTGVFNVTQPLDYETQQYYILTVRAVDGGGQASSVRVYFNVLDVNDNRPAFNTSVYSTSISESLTPGSSILTVAASDADDGPNAQ----------------LSYSIASGDPQAHFGITTAGVLQT--RKLLDRETQSFYNLVVTVNDMALPPATRFTSTAQVSVILLDVNDCPPVFTSQKMAY-IQENTAVDTVVFTVQATDADSGPNSYVEYSLGGSYGVKFSIDNIDGSVRLVGELDREEMANYSLTIVATDKGQPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEE---NTLSGTDVLQVFASDADEGTNGQIRFSIAAGN---GNSD------FRID-SVTGVISVAKLLDRETRASYSLVVQAADRGSSPRVDRATVNIVLLDVNDCAPVFELSPYTVRVQENLADLPKN---ILQVVGRDDDYGSNGQLSYSLSGGNEDAAFSLTSSGQLKLIRTL 2303 HSP 4 Score: 163.696 bits (413), Expect = 5.688e-40 Identity = 192/727 (26.41%), Postives = 309/727 (42.50%), Query Frame = 1
Query: 463 TGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFE----LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK---RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSRE-IFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK-DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATS-PYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIK---SRSHRITQSDR--ILVRASDQ 2589
+G L LI ++DRE +D I I GS + L+ D+ND VP F+ SI ED P G + L ASD D + G+ +Y + +F SI +II L +DRE+R Y +VA D + + + DINDN P++ PY + T +F++ D D +N S+L + + + R + I L G +E+ V +V DGG T T++++ + P+I I +S EN+ I+T ++ + N H+ + +S LS K D E ++ Y + I D+ P ++ ++ + VLD NDN+P+F K + EI+EN + + VSA D+DS N ++ Y++ + GN FSIN G I T DRE+ + Y+ V A+D G P +S+ S+++ VLD ND P F K + + E N V + + DED N + Y I TS P+ NP G +++ ++RE+ V A D G + S VT+ + D+ND+ P F+ PS ++ + G L+ K+ A D D NG +F + ++S + G + +K+ ++ S H +R +V ASD+
Sbjct: 2294 SGQLKLIRTLDRE----TQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLFSSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGVITYSLSG-------GDGQF-------SINPATGQIITSSL-----LDRESRGNYQLLVVASDGGQPTPLSSSAMVSVVVTDINDNPPRFHHHPYVTHIPASTAPGSLVFAVTVTDEDSGSN--SQLHYSL------SGRNSEKFKIDPVRGAITASEKLTGSSEVTFTV--RVKDGGSNPKTDSTTVTVRFVTGGDFPIIKIKDKSFTYPENQAINTIVTKVSGTSTRAGPLSYYIASGNLDNAFHVDQ-LSGELSLK-------------------APLDYENIEKYVLWIEARDQSFPPYSAYEKIEITVLDVNDNNPVFEKEPFHAEILEN-LSPQRVLVVSALDQDSGPNGQLDYTIID-GNKENSFSINRATGEIRTTRPLDREKTAQYSLKVKATDRGAPQKSTAVSVVINVLDVNDNAPRFSKIFSATVPE---NAPVGYTVTRVTTTDEDTGANAVSRYTISDTSLPFSINP-------------STGDITISRPLNREDTDHYIAKVSAHDSG---WTVSTDVTIFVTDINDNAPRFSKPS----YYLEYPELTDVGSLVTKVSATDLDEGFNGK-IFYFIRSQSENFRINSSTGEIFVKQQLRYQNSTGHNNANINRHSFIVTASDR 2941 HSP 5 Score: 163.31 bits (412), Expect = 6.626e-40 Identity = 170/615 (27.64%), Postives = 267/615 (43.41%), Query Frame = 1
Query: 838 LKVIKKIDRE-TREKYSFTLVALDTEGKRGHVN---IVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLD--FKID--------TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLT--ISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIG-NIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRS---STASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFET--GYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
++ ++DRE + Y + A++TE + H + + ++DINDN P + +TV+E I L A DAD+ N I S D F+ID T +L R+ K + ++ DG Q ++D+T I++ D ND+ P S + S I E+ I+ + D D +N E +S +D Y L P G+ N + D E +Y + + +D G SS + VLD NDN P F S+Y I E+ S I +V+A D D NA++ YS+ +F I GV+ T++ DRE +S YN V +D P + STA + V +LD NDC P+F Q I E N AV + ++A D D N V Y +G + +F + +G + L G +DREE + + ++A D G+PPLS+++ VT+ + D+ND+ P F S + +I E T G + ++ A D D NG + F + S I+ VI + R R + S ++V+A+D+
Sbjct: 1671 IQTAMELDREHGADLYLLDVYAIETEASQPHTQRAEVEITLQDINDNPPIFPTDILDVTVQENVGDGFRIMQLTATDADEGPNALVTYTIISGADDSFRIDPESGDLIATKRLDRERRS------------------------KYSLLVRADDG---QQSSDMTVNITVSDVNDHTPKFSRSVYSFDIPEDMAPGSIVAAILASDSDSGVNGEITYSLEEDDGDYTFLLN------------PVTGVF-------NVTQPLDYETQQYYILTVRAVDGGG--QASSVRVYFNVLDVNDNRPAFNTSVYSTSISESLTPGSSILTVAASDADDGPNAQLSYSIASGDPQAHFGITTAGVLQTRKLLDRETQSFYNLVVTVNDMALPPATRFTSTAQVSVILLDVNDCPPVFTSQKMAYIQE---NTAVDTVVFTVQATDADSGPNSYVEYSLGGS----------YGVKFSID-NIDGSVRLVGELDREEMANYSLTIVATDKGQPPLSSTMDVTMMVLDVNDNTPSF------SQNIYDIEIEENTLSGTDVLQVFASDADEGTNGQIRFSIAAGNGNSDFRIDSVTGVISVAKLLDRETRASYS--LVVQAADR 2215 HSP 6 Score: 149.058 bits (375), Expect = 1.493e-35 Identity = 173/672 (25.74%), Postives = 291/672 (43.30%), Query Frame = 1
Query: 547 ISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMN--CEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKY---SLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESI 2529
+S SF L + D+ND P F + ++ I EDVP G I A+D DS + Y + + + + +I + + L +DRET + A D + K + +++NI D+ND P + Y ++ V+ E+ SL A D D N + F D ++L R+ I+ E + M L V + D G L + + +++KD NDN P+ A IKEN+ +T ++ D DL N ++ DT H+ + + +V++ DRE+ Y + + D G + + ++ V+D DN PIFT+ Y F + EN ++ IG++SA D N I Y S D+ G F++N G I DRE+++ Y V+A G+ + + +I VK D ND P F E V + N +++ +A D+D NG++ Y + NP F + K+G ++L G ++ S+ ++V+A D G P ++++ +TV++ D+ND+ PVF S V + SE K++A DKD LNG +V+++ G + I DG++ +K +
Sbjct: 434 VSRSSFA-SLVIFVNDINDHPPIFQEAVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVS------------GNSLGWFAISENSGLVTSAAL-----LDRETASVVVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFTQSSYHVSLVEHSPAGSELLSLSATDTD--LGANGTVRFTFDAETPATVQELFRLDTITGKLSTTTELDREDMGSYLLYV--RATDAGAPPLHSIAKVNVTLKDINDNRPVFYPVQYFANIKENEPPGSYVTTVSASDPDLGRNGTVRYTITAGDTFKFHINSNTGKITT---------LVLL-----------DREEKTAYQLQVSATDGGELRSHTHAIVTITVVDTQDNPPIFTQKEYSFVMFENVAPNTVIGTISASTVD--LNTNITYLIASGDQRG--LFAVNSATGHITATSLIDREEQAFYQLKVVAR-GGDVTGEALVNITVK--DLNDNAPHFLHSEEH--VSAVENWNTGHHIFQAKAFDQDEGTNGMIVYSLQ------QNPKG----LFHIH-EKHGLITLTGPLEV-TTSSYQVEVVASDRGVPQRTSTLILTVSVYDVNDNAPVF---DQLSYEVVILESEPVNSRFF-KVEATDKDSGLNGEIVYDITGGNTNDIFGIFPDGQLYIKADL 1038 HSP 7 Score: 149.058 bits (375), Expect = 1.799e-35 Identity = 187/741 (25.24%), Postives = 309/741 (41.70%), Query Frame = 1
Query: 304 SLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREE----LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH----VNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMA----EMKLVVPLKV--VDGGGLQNTTD--LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKS--FDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLA-KLDAEDKDYALNGSVVFEL 2460
+++++++ E+ P S + + A + + A R+ ++SGN I N +G + + +DRE + D IS+ I +T D+ND+VPTF + +S++E P G + A+D D G + + +T ++ F+ +I +L ++DRE Y + A D H VN+ L KDINDN P + + Y +KE + ++ A D D N G R ++ G + + E K L+V DGG L++ T +TI++ D DN P+ + S + EN ++ ++ DL N + D +RG+ + + + DRE+ FY + ++ +G +T ++ V D NDN+P F S +EN I A D+D N I YSL + F I+ +G+I + S Y V+ASD G P R+ST + V V D ND P+F + YE I+ES V++ +EA D+D NG + Y+I T N+ I +G+L + +DRE Q + ++ARD PLS S+ VT+ L+D+ND++P+F +++ E G L+A ++ AEDKD+ N V +
Sbjct: 459 AVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFAISEN--SGLVTSAALLDRETASVVVLNISAKDQGLQPKISYTKLIVNIT----DVNDQVPTFTQSSYHVSLVEHSPAGSELLSLSATDTDLGANGTVRFTFDAETPAT------VQELFRLDTITG--------KLSTTTELDREDMGSYLLYVRATDAGAPPLHSIAKVNVTL--KDINDNRPVFYPVQYFANIKENEPPGSYVTTVSASDPDLGRN--------------GTVRYTITAGDTFKFHINSNTGKITTLVLLDREEKTAYQLQVSATDGGELRSHTHAIVTITVVDTQDNPPIFTQKEYSFVMFENVAPNTVIGTISASTVDLNTNITYLIASGD---------------------QRGLFAVNSATGHITATSLIDREEQAFYQLKVVA--RGG-DVTGEALVNITVKDLNDNAPHFLHSEEHVSAVENWNTGHHIFQAKAFDQDEGTNGMIVYSLQQNPKGLFHIHEKHGLITLTGPLEVTTSS-YQVEVVASDRGVPQRTSTLILTVSVYDVNDNAPVFDQLSYEVVILES---EPVNSRFFKVEATDKDSGLNGEIVYDI--TGGNTND---------IFGIFPDGQLYIKADLDREVQDRYNLLLVARDRAVEPLSASVNVTIILDDVNDNRPLF----NSTNYVFRFMEEQPRGSLVARRVFAEDKDFGPNSEVRYSF 1120 HSP 8 Score: 144.436 bits (363), Expect = 4.262e-34 Identity = 184/644 (28.57%), Postives = 273/644 (42.39%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN-IYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSIT---VTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
LT + D+ND P F + E+ ILE P+ A+D DS G Y DI D F QL + +DRE +++Y+ LVA D E VN+ + + D+NDN P + Y E + + + F D NS++ + +T + N + +SS + E ++ + D G L++ + + I+D NDNAP + A I E+ + L ++ D D N + H+++ E S+ + + G V + D E YS+ II D GS L+SS SV VLDENDNSP F+KS +I+EN + S++A D DS NA I YS+ N FSI+ G IF K D E +SLY + A DNG P RSS+ +++ V D ND P+F F + N+ + ++ I A+D D D NG + Y I +P N+ F + +G + G IDRE + + V A D P +TV + D NDH P F S + + + G +L + A D D NG V +ELV +S
Sbjct: 962 LTVSVYDVNDNAPVFDQLSYEVVILESEPVNSRFFKVEATDKDSGLNGEIVY---------DITGGNTNDIFGI---------FPDGQLYIKADLDREVQDRYNLLLVARDRAVEPLSASVNVTIILDDVNDNRPLFNSTNYVFRFMEEQPRGSLVARRVFAEDKDFGPNSEVRYSFETPQ-PNFELNAITGELSSTLQMDRESLMRQRGAAVFTFTVISSDQGLPKPLKDQAKVQVYIQDINDNAPKFTKDIYQASISESAPNMTQLLRVSASDVDENKNGQVRYHISEG-----NEETQFSIDSSS-----GQVTLV-------GKLDYEATSSYSLKIIAEDSGSVPLSSSCLLSVSVLDENDNSPSFSKSSMSVDILENMRIGELVVSITATDSDSGSNADITYSIMANNNHGTFSISPSTGSIFLVRKLDYETQSLYKLNITAKDNGRPPRSSSIPLVIHVRDFNDNPPVFTPGDIFKSIPE--NLPLSTSIMTITAHDTDADINGELEYSIVQQTPRGNH--------FSIDPI-SGIIFSNGQIDREFSNLFELTVKATDQAVPAEFRKFALKNITVWVTDQNDHVPNFI-----SQNALVAEANIVIGSILTTVMAFDPDEGANGEVEYELVKGDS 1553 HSP 9 Score: 140.969 bits (354), Expect = 4.669e-33 Identity = 187/753 (24.83%), Postives = 302/753 (40.11%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGN-VRLRNLIQLNFVTGSLHLISSVDREE----LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIK--DINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVII---YQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESY--GNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREE------QSTIYIDVIARDHGKP-PLSNSITVTVTLNDLNDHKPVFT---FPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV-GNE 2472
+ S + + L E+ P SEL++L A RF + ++ L +L+ +TG L + +DRE+ L + D + S I ++ + D+ND P F + +I E+ P G + ASD D + G Y I D FKF + ++ + +DRE + Y + A D R H + ++ I D DN P + Y + E + + D +N+ + + I + G+ R L + + + + A +L V V GG + + I++KD NDNAP + EN T + D+D N +S N H+ E K G++ + ++ T+ Y V ++ D+G PQ TS+ +V V D NDN+P+F + YE I+E+ +S V A DKDS N +I Y + GN F I G ++ K DRE + YN ++A D S++ ++ + + D ND +P+F Y F +E G++ + A D+D N V Y P F++ G+LS +DRE + VI+ D G P PL + V V + D+ND+ P FT + +S S S N++ L ++ A D D NG V + + GNE
Sbjct: 562 TQSSYHVSLVEHSPAGSELLSLSATDTDLGANGTVRFTFDAETPATVQELFRLDTITGKLSTTTELDREDMGSYLLYVRATDAGAPPLHS----IAKVNVTLKDINDNRPVFYPVQYFANIKENEPPGSYVTTVSASDPDLGRNGTVRYTITA------------GDTFKF------HINSNTGKITTLVLLDREEKTAYQLQVSATDGGELRSHTHAIVTITVVDTQDNPPIFTQKEYSFVMFENVAPNTVIGTISASTVD---LNTNITYLIAS---GDQRGLFAVNSATGHITATSLIDREEQAFYQLKV---VARGGDVTGEALVNITVKDLNDNAPHFLHSEEHVSAVENWNTGHHIFQAKAFDQDEGTNGMIVYSLQQNPKGLFHIHE-------------KHGLITLTGPLEVTTSS-----------YQVEVVASDRGVPQRTSTLILTVSVYDVNDNAPVFDQLSYEVVILESEPVNSRFFKVEATDKDSGLNGEIVYDITG-GNTNDIFGIFPDGQLYIKADLDREVQDRYNLLLVARDRAVEPLSASVNVTIILDDVNDNRPLFNSTNYVFRFMEEQPRGSLVARR----VFAEDKDFGPNSEVRYSFETPQP-----------NFELNAI-TGELSSTLQMDRESLMRQRGAAVFTFTVISSDQGLPKPLKDQAKVQVYIQDINDNAPKFTKDIYQASISESAPNMTQ-------LLRVSASDVDENKNGQVRYHISEGNE 1235 HSP 10 Score: 139.043 bits (349), Expect = 1.917e-32 Identity = 164/585 (28.03%), Postives = 263/585 (44.96%), Query Frame = 1
Query: 571 ELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK---RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLE--ILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSR-SSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTV 2295
+++ +++D+ND P F Q++ I E+ + V+ A+D DS Y + + KFS + I ++++ ++DRE YS T+VA D +G+ +++ + + D+NDN+P + Y I ++E T S L+ F +D N ++ F I A GNS + + L++ + A LVV + D G T++I D ND AP+ ++ + +++EN L IL ++ +D+D N + +S SLS NE + Q++ ++ DRE D YS++I ID GSP L+ S V+V D ND P+F+ S + I E++ S++ V+A D D +N I YSL G+ FSIN G I T DRE + Y V+ASD G+P+ SS+A + V V D ND P F Y +I S A + + + DED N + Y + N + K + IT + KL+ S + V +D G P ++S TVTV
Sbjct: 2017 QVSVILLDVNDCPPVFTSQKMAY-IQENTAVDTVVFTVQATDADSGPNSYVEYSLGGSYG------------VKFS------IDNIDGSVRLVGELDREEMANYSLTIVATD-KGQPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEENTLSGTDV-LQVFASDADEGTNGQIRFSI-AAGNGNSDFRIDSVTGVISVAKLLDRETR--ASYSLVV--QAADRGSSPRVDRATVNIVLLDVNDCAPVFELSPYTVRVQENLADLPKNILQVVG-RDDDYGSNGQ----------------LSYSLSGGNEDAAFSLTSSGQLKLI--RTLDRETQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLFSSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGVITYSLSG-GDGQFSINPATGQIITSSLLDRESRGNYQLLVVASDGGQPTPLSSSAMVSVVVTDINDNPPRFHHHPYVTHIPAS---TAPGSLVFAVTVTDEDSGSNSQLHYSLSG-----RNSEKFKIDPVRGAITASEKLT--------GSSEVTFTVRVKDGGSNPKTDSTTVTV 2539 HSP 11 Score: 134.806 bits (338), Expect = 3.603e-31 Identity = 120/439 (27.33%), Postives = 195/439 (44.42%), Query Frame = 1
Query: 1255 TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTK-NERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYG----NMAVHNNLGLIEANDEDLDE-NGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSL---YGVIDREEQSTIYIDVIARDHGKPPLSNSI-TVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSR 2538
T++ I + D NDN+P+ TS KE+ + + + T D D+ N ++ TTY ++ R P ++ + T DRE FY +LI DKG P+ Q +V + D NDN P F Y+ + E++ S + ++A D+D N+ I+Y LDE F I+ G + KE D E K Y+ T+ A DNG PS S +K+LD ND P+ + +Y F + N + + L+ +D D NG + I + F+V + LSL V+DRE S+ + V D+G+P +S ++ + +ND+NDH P+F + V+IS + G + + A D D N ++ + LV SL I ++ ++ ++ R
Sbjct: 107 TEVRIVVLDINDNSPVFPDTSIVVSFKEDATSGRQVILDTATDADIGSN-----GVDHTTYRIVQGNEQRKFRLDITVNPSGEGAFLHLVTTG---GLDRELAPFYQLLIEVEDKGEPKRYGYLQVNVTIQDINDNPPAFDLDQYQTSVYEDAAIGSSVLQITATDQDEGANSDIRYFLDE--GTPFQIDPKAGTVVIKEALDYEVKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRY-FPTTSKFASVDENAQIGTVVALLTVSDSDSSSANGNISVSILG---------GNEQGHFEVHTSPVPNLSLIKVASVLDRERISSYNLTVSVSDNGRPVSRSSFASLVIFVNDINDHPPIF----QEAVYKVDISEDVPKGSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFAISENSGLVTSAALLDR 521 HSP 12 Score: 122.865 bits (307), Expect = 1.408e-27 Identity = 158/613 (25.77%), Postives = 268/613 (43.72%), Query Frame = 1
Query: 856 IDRETREKYSFTLVALDTEGK-RGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGAL-----KGMAEMKLV----VPLKVVDGGGLQ--NTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPI-----FTKSIYEFEIMENSVGSSEIGSVSAPDKDSQE-NAKIKYSL---DEIGNIYFSINMYGV-----IFTKEKFDREQKSLYNFTVIASDNGEP-SRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDR-------ILVRASD 2586
IDRE+ +V L ++ V IV + DINDNSP + ++ KE T+ R++ A DAD +N ++I GN ++ R+ + + EGA G + +L + ++V D G + + ++I+D NDN P + + E+ + +T D+D N + L++ T + PK G V+I ++ D E YS+ I +D G P L+ + ++ +LD NDN P+ F + + EN+ + + ++ D DS N I S+ +E G +F ++ V I DRE+ S YN TV SDNG P SRSS AS+++ V D ND PIF++ Y+ +I E ++ + + + A D D +N + Y + + F + +G ++ ++DRE S + +++ A+D G P + + V + D+ND P FT S V++ G L L A D D NG+V F ++ +P T+++ R+ ++I + T+ DR + VRA+D
Sbjct: 84 IDRESLASSVINVVVLSSQPTYPTEVRIV--VLDINDNSPVFPDTSIVVSFKEDATSGRQVILDTATDADIGSNGVDHTTYRI---VQGNEQRKFRLDITVNPSG---EGAFLHLVTTGGLDRELAPFYQLLIEVEDKGEPKRYGYLQVNVTIQDINDNPPAFDLDQYQTSVYEDAAIGSSVLQITATDQDEGANSDIRYFLDEGTPFQID-------------PKAGTVVI-------KEALDYEVKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSSSANGNISVSILGGNEQG--HFEVHTSPVPNLSLIKVASVLDRERISSYNLTVSVSDNGRPVSRSSFASLVIFVNDINDHPPIFQEAVYKVDISE---DVPKGSYIKGVSATDGDSGQNANLRYSLVS---------GNSLGWFAIS-ENSGLVTSAALLDRETASVVVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFT----QSSYHVSLVEHSPAGSELLSLSATDTDLGANGTVRFTF---DAETPATVQELFRL---DTITGKLSTTTELDREDMGSYLLYVRATD 643 HSP 13 Score: 119.398 bits (298), Expect = 1.671e-26 Identity = 152/597 (25.46%), Postives = 250/597 (41.88%), Query Frame = 1
Query: 835 QLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYN--------FTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEAND-EDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDA--EDKDYALNGSVVFEL-VGNESLSPVTIEKDGRVILKESI---KSRSH--RITQSD 2562
+L + +D E EKY + A D + I + + D+NDN+P + P+ + E + + + + A D D + N +LD+ I GN I + + A+ L V K D G Q +T +++ I D NDNAP S SA + EN +T +T DED N ++DT+ + S++ P G + I ++ +RE D Y + D G T S ++ V D NDN+P F+K Y E E + S + VSA D D N KI Y + + + G IF K++ + + +N F V ASD G S +++V ++D ND P F F V ++ V NL + A+D +D N + Y I + +F++ + G +++ + + +++ A+D G P LS+ T+ + + + N H P F S S +S G + L A +DKD +NG + + + GN+ V EK G + L + + K + H RI+ +D
Sbjct: 2603 ELSLKAPLDYENIEKYVLWIEARDQSFPPYSAYEKIEITVLDVNDNNPVFEKEPFHAEILENLSPQRVLVVSALDQD--SGPNGQLDYTIID---GNKENSFSINRATGEIRTTRPLDREKTAQYSLKV--KATDRGAPQKSTAVSVVINVLDVNDNAPRFSKI-FSATVPENAPVGYTVTRVTTTDEDTGANAVSRYTISDTS-------LPFSIN-----PSTGDITI-------SRPLNREDTDHYIAKVSAHDSG---WTVSTDVTIFVTDINDNAPRFSKPSYYLEYPELTDVGSLVTKVSATDLDEGFNGKIFYFIRSQSENFRINSSTGEIFVKQQLRYQNSTGHNNANINRHSFIVTASDRGIKPLMSETTVIVNIVDSNDNPPTFESSSYFTPVTK--SVKVGTNLIKVTAHDKKDFGVNSEIEYVISG---------GNSSSKFRLD-KQTGWVTVASSLTSDINKVYLLEITAKDKGNPVLSDKATLKIAVTEENHHTPEF----SQSQVIAAVSESLTVGTAIRTLSARDKDKDKQMNGLITYNISSGNDDGLFVVNEKTGVLSLAKPLDYEKKQKHELRISATD 3153 HSP 14 Score: 113.235 bits (282), Expect = 1.369e-24 Identity = 135/565 (23.89%), Postives = 237/565 (41.95%), Query Frame = 1
Query: 439 NLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISF--GSFIFELTFLII-----DMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKK---IDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT----TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQI-ETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQEN-AKIKYSLDEIGN--IYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDL 2073
L +N TG L L +D E+ +QK H + IS G +I + +++ + D+ND P F E + E+VP G ++ A+D DS + +Y I++ D ++ II P VI +D E ++ Y T+ A + E + N+ + +K N+ P+++ Y V E + + F +D + + + I G SR+ + + + + G L E K+ + + + G ++ + I+I D ND P+ + ++ E ++T ++ +D D + + S +R K I Q + + DRE Y++ ++ ID GSP T + V + D NDN P + E+MEN + + ++++ D D N YSL G+ YF++ G + T + DREQ S + +V+ D+G P SST ++ VK+ DQND P + E V +GNM +LG+++ D D+
Sbjct: 3120 GLFVVNEKTGVLSLAKPLDYEK--KQK-----HELRISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQENVPSGTIVVKLNATDKDSSSNSVMAYVIQS---------------------SDSDLFIIDPNTGVITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTMVG-EVFASDRDLGDDGVVYYLI----FGRSRRKGFGINKKTGQIYVT-GPLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSEGLSPGGLVTFVSAEDSD-----------------SVPSWSRFTYSVTTDREKNAFTINPQTGQVSVAAELDRETTPVYNLTLLAIDSGSPAATGTATLIVTLEDINDNGPTLVTTT--GEVMENQRAGTPVMTLNSVDPDLAPNQGPFSYSLLSTGSAVTYFTLTSSGELSTSREIDREQISDFYLSVVIKDSGVPQMSSTGTVHVKINDQND-NPSQPRSVEI-FVHYFGNMFPGGSLGIVKPQDPDI 3628 HSP 15 Score: 110.923 bits (276), Expect = 6.745e-24 Identity = 174/722 (24.10%), Postives = 300/722 (41.55%), Query Frame = 1
Query: 301 SSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETR--EKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITV-KECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESY--GNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHG--KPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
S +F + EN P+ + + A R+ I ++ +N TG + + ++RE+ +H S + ++T + D+ND P F+K L E +G ++ A+DLD G KI + +S +E F I ++ QL+ ++SF + A D K +++NI D NDN P + Y V K + + A D D +NS++++ I GNS R+ + + +L ++ + D G L + L I++ + N + P S + A + E+ + L+ +D+D + +N ++ L NE K G++ + K D EK + + I D G TS ++ V D NDN P+F Y + EN + + ++A DKDS N+ + Y + + F I+ GVI T+ D E K +Y+ TV A + + R S A++ +++ N+ P F KQY F + E+ G M +G + A+D DL ++G+V+Y I S + K F + K G++ + G +DRE++ I + V+A++ G + + + V +T+ D ND PVFT V +S G L+ + AED D
Sbjct: 2757 SKIFSATVPENAPVGYTVTRVTTTDEDTGANAVSRYTISDTSLPF----SINPSTGDITISRPLNREDTDHYIAKVSAHD---SGWTVSTDVTIFVTDINDNAPRFSKPSYYLEYPELTDVGSLVTKVSATDLDEGFNG----KIFYFIRS---QSENFRINSSTGEI------FVKQQLRYQNSTGHNNANINRHSFIVTASDRGIKPLMSETTVIVNIVDSNDNPPTFESSSYFTPVTKSVKVGTNLIKVTAHDKKD-FGVNSEIEYVISG---GNSSSKFRLDKQTGWVTVAS--SLTSDINKVYLLEITAKDKGNPVLSDKATLKIAVTEENHHTPEFSQSQVIAAVSESLTVGTAIRTLSARDKDKDK------QMNGLITYNISSGNDDGLFVVNE--KTGVLSLA-------KPLDYEKKQKHELRISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQENVPSGTIVVKLNATDKDSSSNSVMAYVIQSSDSDLFIIDPNTGVITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTM-----VGEVFASDRDLGDDGVVYYLIFGRS---------RRKGFGIN-KKTGQIYVTGPLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFT----QELYDVQVSEGLSPGGLVTFVSAEDSD 3417 HSP 16 Score: 97.0561 bits (240), Expect = 1.099e-19 Identity = 167/742 (22.51%), Postives = 295/742 (39.76%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREE------LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLP------VASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDAD-DQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER-----PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNG 2442
S ++++IE++EN ++++ + A + RF I +GN + +++ VTG + + +DRE + Q D S V + + +++D+ND P F + + E+ + DLP V D D G SY + + + F +S QLK+I+ +DRET+++YS + A+D+ G +++ + D+ND P + + ++ E T ++ + A D D QN + + + + G+ + L++ +G ++ +V DGG L ++ +++ + D NDN P I + ++ +TV DED N + LH SLS +N P RG + T K +V F + D GS T S +V + D PI F EN ++ + VS S + Y + + N + + G + K D E Y + A D P S+ I + VLD ND P+F K+ + I+E N++ L ++ A D+D NG + Y I D K F + G++ +DRE+ + + V A D G P S +++V + + D+ND+ P F+ SA+ + GY + ++ D+D N
Sbjct: 2136 SQNIYDIEIEENTLSGTDVLQVFASDADEGTNGQIRFSIAAGNG--NSDFRIDSVTGVISVAKLLDRETRASYSLVVQAADRGSSPRVDRA------TVNIVLLDVNDCAPVFELSPYTVRVQEN-----LADLPKNILQVVGRDDDYGSNGQLSYSLSGGNE---------DAAFSLTS---------SGQLKLIRTLDRETQDRYSLIITAIDSGSPSLSGSATVLVLVDDVNDMVPLFSSSSFHTSITEDAPTGSDVLLVNASDGDVGQNGV---ITYSLSG---GDGQFSINPATGQIITSSLLDRESRGNYQLLVVAS----DGGQPTPLSSSAMVSVVVTDINDNPPRFHHHPYVTHIPASTAPGSLVFAVTVTDEDSGSNSQ----------LHY------SLSGRNSEKFKIDPVRGAI------TASEKLTGSSEVTF---TVRVKDGGSNPKTDSTTVTVRFVTGGD-FPIIKIKDKSFTYPENQAINTIVTKVSG---TSTRAGPLSYYIASGNLDNAFHVDQLSGELSLKAPLDYENIEKYVLWIEARDQSFPPYSAYEKIEITVLDVNDNNPVFEKEPFHAEILE---NLSPQRVL-VVSALDQDSGPNGQLDYTI---------IDGNKENSFSIN-RATGEIRTTRPLDREKTAQYSLKVKATDRGAPQKSTAVSVVINVLDVNDNAPRFSKIFSAT-----VPENAPVGYTVTRVTTTDEDTGANA 2788 HSP 17 Score: 93.5893 bits (231), Expect = 1.174e-18 Identity = 162/747 (21.69%), Postives = 311/747 (41.63%), Query Frame = 1
Query: 328 ENKPIHSELI-NLKAK---LPTAFKE-----AKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQ---LKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFS-LKAFDADDQNNINSKL---------DFKID--TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDE-DLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER--PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSA--PDKDSQENAKIKYSLDEIGN--IYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSP--YVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVG 2466
E +P H+E++ NL + + +A + + + II GN N +N TG + +DRE+ Q + S + ++D+ND P F+K ++ E+ P+G+ + +D D+ ++ Y I + FS I P + + + ++RE + Y + A D+ G ++ + + DINDN+P++ Y + E T + + + A D D+ N K+ +F+I+ T ++ ++L NN + + A + + PL + T + ++I D NDN P +S + ++ + L +T D+ D +N E ++ V+S S+ R + G V + T+ D KV Y + I DKG+P L+ + V +EN ++P F++S + E+ + I ++SA DKD Q N I Y++ GN F +N GV+ + D E+K + + A+D G +++S ++ ++V D ND P+F F +V+ N+ + + A D+D N ++ Y I ++ ++ +P+ G ++ G +D E + ++ V A + + V + L N++ P F + + +S G ++ ++ A D+D +G V + + G
Sbjct: 2653 EKEPFHAEILENLSPQRVLVVSALDQDSGPNGQLDYTIIDGN--KENSFSINRATGEIRTTRPLDREKTAQYSLKVKATDRGAPQKSTAVSVVINVLDVNDNAPRFSKI-FSATVPENAPVGYTVTRVTTTDEDTGANAVSRYTIS-------------DTSLPFS---------INPSTGDITISRPLNREDTDHYIAKVSAHDS-GWTVSTDVTIFVTDINDNAPRFSKPSYYLEYPELTDVGSLVTKVSATDLDE--GFNGKIFYFIRSQSENFRINSSTGEIFVKQQLRYQNSTGHNNANINRHSFIVTASDRGIKPL--------MSETTVIVNIVDSNDNPPTFESSSYFTPVTKSVKVGTNLIKVTAHDKKDFGVNSE------------IEYVISGGNSSSKFRLDKQTGWVTVASSLTS-----DINKV--YLLEITAKDKGNPVLSDKATLKIAVTEENHHTPEFSQSQVIAAVSESLTVGTAIRTLSARDKDKDKQMNGLITYNISS-GNDDGLFVVNEKTGVLSLAKPLDYEKKQKHELRISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQE--NVPSGTIVVKLNATDKDSSSNSVMAYVIQSSDSDLFIIDPNT-------------GVITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFV----SKQYYFEVSEAAPKGTMVGEVFASDRDLGDDGVVYYLIFG 3324 HSP 18 Score: 90.8929 bits (224), Expect = 7.691e-18 Identity = 80/270 (29.63%), Postives = 134/270 (49.63%), Query Frame = 1
Query: 1543 FDREKVDFYSVLIICIDKGSPQLTSSQQF--SVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQEN-AKIKYSL--DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGL----IEANDEDLDEN-GLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDH 2319
DREK + S+ ++ + GS + + ++ +LD ND P+FT+ +Y+ ++ E + VSA D DS + ++ YS+ D N F+IN G + + DRE +YN T++A D+G P+ + TA+++V + D ND P +V + G + + G + + D DL N G Y + +T V +T +G+LS IDRE+ S Y+ V+ +D G P +S++ TV V +ND ND+
Sbjct: 3346 LDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSEGLSPGGLVTFVSAEDSDSVPSWSRFTYSVTTDREKNA-FTINPQTGQVSVAAELDRETTPVYNLTLLAIDSGSPAATGTATLIVTLEDINDNGP--------TLVTTTGEVMENQRAGTPVMTLNSVDPDLAPNQGPFSYSLLSTGSAVT----------YFTLTSSGELSTSREIDREQISDFYLSVVIKDSGVPQMSSTGTVHVKINDQNDN 3595 HSP 19 Score: 82.8037 bits (203), Expect = 2.388e-15 Identity = 167/759 (22.00%), Postives = 313/759 (41.24%), Query Frame = 1
Query: 307 LFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWI-GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG----GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTL-EILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-------DEIGNIYFSINMYGVIFTKEKFDREQKS---LYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG------LIEANDEDLDENGLVWYEI--GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES-----LSPVT 2490
+++ + E+ P ++L+ + A K + R+ I GN + ++ +G + L+ +D E + S L+ ++D ND P+F+K + + ILE++ IG ++ A+D DS +Y IM F S + +++K+D ET+ Y + A D + + +V++++D NDN P + G +K + S I ++ A D D +IN +L++ I + + + I+ + E+ + + V L+N +T+ + D ND+ P + S++A + E + ILT + D D N E L V S + +R + + Q+ ++ YS+ + D G+ + TS + ++I+ + + P+F++ Y + E + + S+ A K++Y + +G ++ GVI T + DRE + L + I ++ +P + A + + + D ND PIF +I++ + V N+G + A D D N LV Y I GA + +P++ G L +DRE +S + V A D + S+ +TV +T++D+NDH P F S + SF +I + G ++A + A D D +NG + + L ++ L+PVT
Sbjct: 1195 IYQASISESAPNMTQLLRVSASDVDENKNGQVRYHISEGNEETQ--FSIDSSSGQVTLVGKLDYEATSSYSLKIIAEDSGSVPLSSSCLLSVSVLDENDNSPSFSKSSMSVDILENMRIGELVVSITATDSDSGSNADITYS---------IMANNNHGTFSISPSTG--------SIFLVRKLDYETQSLYKLNITAKDNGRPPRSSSIPLVIHVRDFNDNPPVFTPGDIFKSIPENLPLSTSIMTITAHDTD--ADINGELEYSIVQQTPRGNHFSIDPISGIIFSNGQIDREFSNLFELTVKATDQAVPAEFRKFALKN---ITVWVTDQNDHVP--NFISQNALVAEANIVIGSILTTVMAFDPDEGANGEVEYEL----------VKGDSDTFIMDRYSGDIRVASQLVPSKL---------IYSLTVSATDHGTDRKTSRTELTIIL--QGTDGPVFSQPKYITILKEGQPPGTNVISLDA-SSPRGTGTKVEYFIVSVRSGGKAVGRLFTIGRHTGVIQTAMELDREHGADLYLLDVYAIETEASQP-HTQRAEVEITLQDINDNPPIFPT----DILD----VTVQENVGDGFRIMQLTATDADEGPNALVTYTIISGADDSFRIDPES-------------GDLIATKRLDRERRSKYSLLVRADDGQQ---SSDMTVNITVSDVNDHTPKF---SRSVYSF-DIPEDMAPGSIVAAILASDSDSGVNGEITYSLEEDDGDYTFLLNPVT 1876 HSP 20 Score: 73.1738 bits (178), Expect = 2.015e-12 Identity = 172/746 (23.06%), Postives = 291/746 (39.01%), Query Frame = 1
Query: 448 QLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFI-------FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSRE-IFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSP---QLTSSQQFSVIVLDENDNSPIFTKS---IYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKL--SLY------GVI------DREEQSTIY-IDVIA-RDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+LN +TG L +DRE L +Q+ +IS + ++ I D+ND P F K + SI E P + ASD+D K G Y I + T F S Q+ ++ K+D E YS ++A D+ + +++ D NDNSP + + + E E + S+ A D+D + N+ + + I N+ I + + ++ + + + KL + K ++ L I ++D NDN P+ + I EN + +T D D ++N E + T S P G++ N DRE + + + + D+ P + + + +V V D+ND+ P F + E I+ S+ + +V A D D N +++Y L + + F ++ Y G I + K +Y+ TV A+D+G R ++ + L +L D P+F + I++ G N + L A+SP K + F V + GK L+ GVI DRE + +Y +DV A P + V +TL D+ND+ P+ FP+ V + G+ + +L A D D N V + ++ S + G +I + + R R S +LVRA D
Sbjct: 1128 ELNAITGELSSTLQMDRESLMRQRGAAVFTFTVISSDQGLPKPLKDQAKVQVYIQDINDNAPKFTKDIYQASISESAPNMTQLLRVSASDVDENKNGQVRYHISEGNEETQ---------FSIDSSSG--------QVTLVGKLDYEATSSYSLKIIAEDSGSVPLSSSCLLSVSVLDENDNSPSFSKSSMSVDILENMRIGELVVSITATDSDSGS--NADITYSI---MANNNHGTFSISPSTGSIFLVRKLDYETQSLYKLNITAKDNGRPPRSSSIPLVIHVRDFNDNPPVFTPGDIFKSIPENLPLSTSIMTITAHDTDADINGELEYSIVQQT------PRGNHFSID---PISGIIF-------SNGQIDREFSNLFELTVKATDQAVPAEFRKFALKNITVWVTDQNDHVPNFISQNALVAEANIVIGSI----LTTVMAFDPDEGANGEVEYELVKGDSDTFIMDRYSGDIRVASQL-VPSKLIYSLTVSATDHGT-DRKTSRTELTIILQGTD-GPVFSQPKYITILKE-GQPPGTNVISL------------------DASSP---RGTGTKVEYFIVSVRSGGKAVGRLFTIGRHTGVIQTAMELDREHGADLYLLDVYAIETEASQPHTQRAEVEITLQDINDNPPI--FPTDILD--VTVQENVGDGFRIMQLTATDADEGPNALVTYTIISGADDSFRIDPESGDLIATKRLD-RERRSKYS--LLVRADD 1799 HSP 21 Score: 71.2478 bits (173), Expect = 7.005e-12 Identity = 111/516 (21.51%), Postives = 204/516 (39.53%), Query Frame = 1
Query: 1219 LKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER-----PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILV--KVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALN-GSVVFELVGNES-LSPVTIEKDG-----RVILKESIK----------SRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNG 2679
+ DGG + T+ +T++I+ D NDN P+ ++EN + I+ L D+D N VM+ + + + P G++ D E Y + + + + S ++ + N+ P F Y FE+ E + + +G V A D+D ++ + Y + F IN G I+ DRE++ + V+A + G + + V +LD ND P+F ++ Y+ + E ++ + + A D D + W Y D EK F + + G++S+ +DRE + ++A D G P + + T+ VTL D+ND+ P + +G + G + L++ D D A N G + L+ S ++ T+ G R I +E I S +++ + + V+ +DQ +N Q + + Y+ N +P G
Sbjct: 3149 ISATDGGWIAKTSYVTVNIQVTDVNDNPPMFEPDEYFPVVQENVPSGTIVVKLNATDKDSSSN----------------SVMAYVIQSSDSDLFIIDPNTGVITTQGF-------LDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTMVGEVFASDRDLGDDGVVYYLIFGRSRRKGFGINKKTGQIYVTGPLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSE---GLSPGGLVTFVSAEDSDSVPS---WSRF----TYSVTTDREKNA-FTIN-PQTGQVSVAAELDRETTPVYNLTLLAIDSGSPAATGTATLIVTLEDINDNGPTLV---TTTG---EVMENQRAGTPVMTLNSVDPDLAPNQGPFSYSLLSTGSAVTYFTLTSSGELSTSREIDREQISDFYLSVVIKDSGVPQMSSTGTVHVKINDQNDNPSQPRSVEIFVHYFG------NMFPGG 3616
BLAST of Protocadherin-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 177.178 bits (448), Expect = 1.654e-45 Identity = 189/778 (24.29%), Postives = 327/778 (42.03%), Query Frame = 1
Query: 439 NLIQLNFVTGSLHLISSVDREELCQQKDNDCS-----HIVIISF-----GSF---IFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIE---------NYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKR--GHVNIVLNIKDINDNSPQWI---GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGA-LKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK--DCNDNAPLISITS--------RSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTK--------SIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI-----YFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-------QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLA-KLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASDQ 2589
+L +N ++G L + +DRE LC ++ + C H V ++ GS + ++ L+ D+ND P F + +SI E +G + LP A D D+ I Y+I F + + + + + L++ +++DRE Y L D + G V + + + D NDN+P ++ P +IT + + L+A D D N F L L + E + M +LVV + DGG L + +T++++ D NDNAP+ + + KI EN + + +++V D DL + L T L++ N+ Q + D E+ Y+V ++ D+G+P+L+ + V+D NDN+P+F ++YE + EN + + ++ A D DS N I ++L E+ FS+NM G + DRE++ Y +V A D G P R + A + V VLD+ND P F Y+F + E +V +G + +D D +N V + + PD T G + V+DRE++ + V A D G+P LS S V++T++D ND+ PV T P++ + ++ ++ + G L+ + A D D NG ++E++G + D G + L ++ S + R++VR D+
Sbjct: 72 SLCIVNELSGELSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRAL---LELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRIT-EHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVAR--DGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPT--------GAELASPNK---------VQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEE---ETSVGTYVGTVSTSDLDEGDNARVALNLVREA----GPDWIG----GAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNT-NDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGL---HRLVVRVRDR 811
BLAST of Protocadherin-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 175.637 bits (444), Expect = 1.733e-44 Identity = 183/729 (25.10%), Postives = 303/729 (41.56%), Query Frame = 1
Query: 505 LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD-TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE------CTTSREIFSLKAFDAD---------------DQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKG---SPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL----------DEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETG--YLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILV 2574
L +DN + SF ++ + D+ND P FA E+EL + E+ G VI A+D D + + +Y + E F + + L+ +++DRE R Y T+ A D T +++ ++D NDNSP++ Y V E TT I ++ A DAD D + + T L +R L + V+ + DGGGL T L +++ D NDNAP + S +A++ E+ L ++ D+D +N E S + P+ + + + ++ DRE+ FY++++ D+ +L+S+ + S+I+ D NDN+P FT ++ VG+ + +V A D DS N+ ++Y+L G F++N + G + + DRE + Y TV+A D G P +STA++ V V D ND P F R++YE I E + + + A D D NG + Y+I + P T F++ G L++ +DRE ++ + V ARD G P S++ +V VTL+D+ND P F + + E G L+ ++ A D D +G V + G ++ DG V L S+ R Q +L+
Sbjct: 1480 LSSLRDNGAGSFIRPPMSSF-NQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSV----------LSGSEGAFVVDAASGV--------LRASRRLDREERASYLLTVRASDGTHATDARLSVA--VRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRP------------------LDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAEL------------------EFSISSGDPEGRFAVGNDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAV-VATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAE---DEPPGTEVLRLSAWDPDEGANGELRYDIASGDP---------TGDFRLDPVL-GTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQL-----SPYTVHARENTQGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPDGHVHLLRSLD----REAQPQHVLI 2128 HSP 2 Score: 172.17 bits (435), Expect = 1.868e-43 Identity = 187/725 (25.79%), Postives = 318/725 (43.86%), Query Frame = 1
Query: 406 FVIISGNVRLRNLIQLNFVTGSLHLISSVDREELC--QQKDNDCSHIVIISFGSFIFE--LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNIN-------SKLDFKID--TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENK-----SFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEF-NIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIY-IDVIARDHGKP------PLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
++I+SG+ R + + G + +++DREE Q + V+ + G E ++ L+ D+N+ P F + E+SI ED P+ A+D DS K G Y+I KF D QL V ++DRETRE+YS T+ A+DT E V + + + D+NDN P + Y +E + +++A DAD +N +++F++D T ++ + R + E ++ + DGG LQ+ + + ++D NDN P + + A + E+ L L +T D D +N +N+ NE K + ++ + + S DRE+ Y++++ D G+ L +S +V VLDENDN P FT+S+ + +E++ + +++A D+D+ + ++Y++ GN + F+I+ G +F + D E + LY V A D G P RSS ++V V D ND P F F +I+E N+ + + + A D D D NG + Y I P P A F + ++G++ IDRE ++ + V A D P L N VTV + D ND+ P F P++ + ++ G ++ L A D D A N +V + + G ++
Sbjct: 693 YLIVSGD--QRGSFSIEWSGGRIFTANAIDREEQAFYQLR-------VVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGE-----------KFGIFPDG-------QLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGRIASLR------------VFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINE----------------GNEGGK------FTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAI-VAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIME---NIPIGTRVITVTARDPDADVNGELHYSIARQFP----PGAH----FTID-PESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKN---VTVLVTDENDNAPRFVTPTAILVDGLRAAA----GSVVGTLQASDPDEAENAAVRYAVTGGDA 1336 HSP 3 Score: 157.147 bits (396), Expect = 8.736e-39 Identity = 185/728 (25.41%), Postives = 304/728 (41.76%), Query Frame = 1
Query: 436 RNLIQLNFVTGSLHLISSVDREEL------CQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVN------IVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQ------KSLYNFTVIASDNGEPSR-SSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRI 2550
R + +L+ +TG + + S+DREEL Q +D + GS ++T ++ D+ND P F + SILE+ P G + A+D D G Y++ D +F ++ + + +DRE R Y + ALD GH+ + + + D D P + Y V E + S+ A D +N+ + + I + G+ R I + + A +L V V + GG+ +++ + D N++AP+ S I E++ + D+D N E + + + P + + Y++ DRE + YS+ + +D G L+SS +V VLD NDN P+F S Y F E S +G+V A D D+ N + YS E + F ++ G I + FDRE + ++F+V+A+D G P A++ V V D ND P F K Y+ ++ ES N+ L + A+D D NG + Y I + + +F V + G+++L G +DREE ++ + V A D G PL+ S TV V + D ND+ P FT S V+ G LL L A D+D +G V + +V + + I++ G V L + + R+
Sbjct: 494 REMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPL-----GS-TAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTA------------GDAARF------QVNAVTGAVSTRVSLDREERAVYQLQVTALDG----GHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLD----LNANVTYLIVS---GDQRGSFSIEWSGGRIFTANAIDREEQAFYQLRV---VANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIF----------PDGQLYVRYEL--------DRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSF-EKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNL---TQLLRVTASDVDEGVNGALRYAIN---------EGNEGGKFTVDAS-TGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFT----ESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRL 1147 HSP 4 Score: 155.992 bits (393), Expect = 1.942e-38 Identity = 195/721 (27.05%), Postives = 297/721 (41.19%), Query Frame = 1
Query: 367 AKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTG--SLHLISSVDREELCQQK----DNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQ-----KYGIASYKIENYF---KSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKIT-VKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMN--CEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKY---SLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFV-NISSEFETGYLLAKLDAEDKDYALNGSVVF 2454
A PTA E I+ GN R ++ V G L + S +DRE + +D V S + L + D+ND P FA ++ E P G + A D DS +Y I S +F +ST ++T K+DRE + A D + K + ++ + + D+ND P + Y T V+ + S+ A D+D N + +F D R++ R+ ++ L + + E LVV + L +T +T+ + D NDN P+ A I EN+ +T +T D D N + D + V ++ST+ S DRE+ Y + + +D G + S ++ V D D P F + Y F + EN + +GSVSA D NA + Y S D+ G+ FSI G IFT DRE+++ Y V+A+ G + AS+ V V D N+ P+F R YE +I E + V++ + A D+D +NG V YEIG E K I +G+L + +DRE + + V A D G PLS+S+TV VT+ D+ND+KP+F S S+V + E E G L+ + A D D NG V +
Sbjct: 257 ADSPTANGELS--VSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATA---SLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTD-------------------------GKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPA--QYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTG-AVSTR-------------------VSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQRGS--FSIEWSGGRIFTANAIDREEQAFYQLRVVANSGGV---AGEASVSVLVHDVNNHAPVFDRASYEVSIAE---DEPVNSRFFSVRATDKDSGKNGEVKYEIG-----------EGNGGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFN-----SSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTY 899 HSP 5 Score: 152.91 bits (385), Expect = 1.753e-37 Identity = 155/580 (26.72%), Postives = 258/580 (44.48%), Query Frame = 1
Query: 838 LKVIKKIDRETREKYSFTLVALDTE---GKRGHVNIVLNIKDINDNSPQWI----------GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAK-LGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMS-RSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILK 2520
LKV ++DRE Y+ T++A D + ++V+ + D+ND++P++ G P VK+ T A DAD + +N+KL + I + LG S L+ +G + +V+ + D G T T LT+++ D ND PL + T A EN + ++ D DL N + + +E+ SL+ K KS DRE+++ Y +++ D+GSP L S+ + +V+V D NDN P+F Y I+EN G + + +V+A D D N ++Y L F +N + G + T+ DRE++++Y V A D G S A + + V D D P F R Y F + E N+A +G + A+ DL+ N V Y I + ++ F ++ + G++ IDREEQ+ + V+A G ++ +V+V ++D+N+H PVF S V+I+ + + A DKD NG V +E+ I DG++ ++
Sbjct: 292 LKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVT---------AMDAD--SGLNAKLRYSIVSGNDLG------WFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGK---------------VTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFE---NVAPGTLVGSVSASTLDLNAN--VTYLIVS---------GDQRGSFSIEWS-GGRIFTANAIDREEQAFYQLRVVANSGG---VAGEASVSVLVHDVNNHAPVFDRASYE----VSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPDGQLYVR 817 HSP 6 Score: 148.288 bits (373), Expect = 4.414e-36 Identity = 160/675 (23.70%), Postives = 266/675 (39.41%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREE----LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDV-PIGH----VIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTA------KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMN--CEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKY---SLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLG------LIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARD 2253
E+E++EN + L A + A + ++SG+ ++ +G L +DREE L + +D +H L+ + D ND P F++ + ED P G VI +A D DS +G +Y + S D ++ + F + L V + +DRE+R Y A D G + +N+ D NDN+P V E + + A DD +N++L+F I + +GN +LS + ++ +++ P + L + +++ + D NDNAP + + RSA E+ ++ + D D N E++ + + + +V + DRE Y++ ++ +DKG P LTS+ +V V D NDN+P F + YE I E+ +E+ +SA D D N +++Y S D G+ + G + DRE+ + Y V A D G P+RS TAS+ V + D NDC P F+ + Y A N G + A D+DL +G V Y A ++ +G + L +DRE Q + + A D
Sbjct: 1521 MELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGS---EGAFVVDAASGVLRASRRLDREERASYLLTVRASDGTHATDA-------RLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALA---PSED--SDWADGAFGLHPVTG--------ALNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISA--TDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRERQSFYNLVVR-VSDRARHPPAR------LSSAVRVSLILTDVNDNAPAFT-SPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLV----------RELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLD-PVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQ-------LSPYTVHARENTQGPPVLILQVVARDDDLGSSGQVTYAA-----------AGGNDGGAFSVSPDGHVHLLRSLDREAQPQHVLIITATD 2133 HSP 7 Score: 111.694 bits (278), Expect = 6.827e-25 Identity = 145/631 (22.98%), Postives = 263/631 (41.68%), Query Frame = 1
Query: 262 LNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKR-----GHVNIVLNIKDINDNSPQWIGLPYKITVKECTTS-REIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDL--EMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE--IGNIYFSINM-YGVIFTKEKFDRE-QKSLYNFTVIASDNGEP---SRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI 2103
+N H + D++S +E+ + E++P++S +++A + K + ++ I GN + I F G L++ +DRE + + + S + ++D+ND P F E+ +G ++ A+D D+ G +Y F+ + E + + +S++ + + + I + +SF++VA T+G R + + ++D+NDN PQ+ Y+ +V E ++ ++ + A D D+ +N L + I+ G + + G+L + + D G L + + + + D NDN P + + S E+ R E+L LT DED + ++ +T H + RS G V + + D E Y + + D G P +S+ V V D NDN P F IMEN + + +V+A D D+ N ++ YS+ +F+I+ G I T + DRE L+ TV A+D P RS+ ++ V V D+ND P F +V+ A + +G ++A+D D EN V Y +
Sbjct: 751 VNNHAPV--FDRAS--YEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGI---FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYS----FEKPQVNFELDSETGRIASLRVFDREAL---------IRQGGAASFSFSVVA--TDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDE--GVNGALRYAINEGNEGGKFTVDASTGQITLL-----GSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNT---HATFAIDRST---------GSVFLA-------RRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAI-LVDGL-RAAAGSVVGTLQASDPDEAENAAVRYAV 1331 HSP 8 Score: 95.9005 bits (237), Expect = 4.796e-20 Identity = 129/524 (24.62%), Postives = 212/524 (40.46%), Query Frame = 1
Query: 946 IKDINDNSPQWI--GLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDL--TISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPI-----FTKSIYEFEIMENSVGSSEIGSVSAPDKDSQ-ENAKIKYSL---DEIGNIYFSINMYGV-----IFTKEKFDREQKSLYNFTVIASDNGEP-SRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFE-TGYLLAKLDAEDKDYALNGSVVF 2454
+ D+NDN+P + G+ ++ KE R++ A D D N + +KI + R + + + G L A + ++ DGG + L ++++D NDN P + A + E+ L D LH R PK GMV Q D E Y++ + D G+P L+ + +LD NDN P + + E++ + V+ D DS N ++ S+ +E G +F ++ GV + + DRE+ +YN T++ASDNG+P +RS+TAS++V V D ND P F + + + + A D D N + Y I V+ D F V G ++ G +DRE S++ +++ A+D G P + ++TVTL D+ND P+FT +V + E G + + A D D NG+V +
Sbjct: 13 VGDVNDNAPSFPEPGV-MEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAED--------------------SPVGAALRD--LLH----RGRGPLAVPFDPKTGMVSTRQ-------PLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERG--HFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSY--VKDVTAMDADSGLNAKLRYSI------VSGND---LGWFSVD-ESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFT-----QTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRY 483 HSP 9 Score: 94.7449 bits (234), Expect = 9.590e-20 Identity = 98/381 (25.72%), Postives = 165/381 (43.31%), Query Frame = 1
Query: 1495 RGMVIIYQIETNENKSFDREK----VDFYSVLIICIDKGS-----PQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYG--NMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCEN 2598
RG +I ++ SFD + F S+L D G+ P ++S Q + V D NDN P+F E E+ EN+ I ++SA D D +NA + YS+ F ++ GV+ + DRE+++ Y TV ASD + ++ A + V V D ND P F R Y F++ E +G + A D D G V Y A +P ++ A+ F + G L++ +DRE ++ + A D G L+ + + V + D ND+ P S A+ + + G L ++ A D D +N + F + + + DG++ + ++ ++VR SD+ +
Sbjct: 1449 RGHGVINPLDAPWRVSFDLTARCMFIVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTY---ALAPSEDSDWADGA--FGLHPV-TGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSVQNDSLAA----EVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRERQSFYN---LVVRVSDRARH 1811
BLAST of Protocadherin-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 167.162 bits (422), Expect = 8.295e-42 Identity = 163/640 (25.47%), Postives = 284/640 (44.38%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI---ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD---TEGKRGHVNIVLNIKDINDNSPQWIGLPY-KITVKECTTSREIFSLKAFDADDQNNINSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATS-PYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVF 2454
+T L+ D ND +P F E+ ++ ED PIG + L A+D D+ I SY++ + +F S+ +II +DRE RE Y + ALD T G +V+ + D+ND++P+++ PY +F++ A DAD N L F + +A G S R + ++ AL+G + L + ++V DGG + T +T+ +D + P + RS +E++ +T++ + S HL + +L +V + P+ G V ++ ++ D E Y +++ D G P ++ + V VLD NDN+P F+ S + ++ EN+ I ++A DKDS N ++ YS+ IGN++ G I + DRE + Y TV A+D G P++ T +L+ V D+ND P F + + ++ E + AV + + D D N + + + S P+ +P G++++ ++RE++S + V A D P + S VT+ ++D+ND+ P F + ++ E L+A++ A D D NG V F
Sbjct: 12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHF-----------------SVNPSTGQII-----TTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDAD--AGPNGDLRFSLSGSASAGFSVDPRRGVIHAAR-------ALQGPRD-DLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAARSS--RRAGPVSYHL--ASGGNLGDVFAVD-------PQSGEVSVH-------RALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTP-PRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVRE---DAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHP-------------STGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRF----GQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFF 576 HSP 2 Score: 124.79 bits (312), Expect = 7.996e-29 Identity = 150/655 (22.90%), Postives = 265/655 (40.46%), Query Frame = 1
Query: 559 SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH--VNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN-------INSKLDFKI--DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMA-EMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
S +L ++D+ND P F+ + E+ P ++ L A D DS G Y I + + F+ + +++ + +DRE Y T+ A D H V +++++ D NDNSP++ + + V+E + + DAD+ N ++ L F I T ++ SR+L+R G A +++ P V +TD+TI + D NDNAP T+ + E ++ ++ D D N + + T V S + RP R Y+ + K YS ++ +D+G P L+S ++ ++ N N+P F + Y + + I +SA D D N +I YS+ GN F ++ G + + + S+++ TV A D G P SS A+ ++ V ++N P F E ++ E N ++L + A D D NG + Y I + + + F + +G + L G +D E + + V A D G + V++++ D+ND+ P+ +AS + I +G + +DA D D N ++ L E+
Sbjct: 317 SAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVL-TAVDKDSGINGQVDYSI---------IDGNIGNVFRVNPNSG--------EIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDR-------------SGYAVKVRASDPAWTV-------STDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENF--RVGRDSGEIHSVRPLR-----YRDPAGGGSGANLNK---YSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVG-GNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPE---NHPAGSSLARVTATDTDAGVNGAIVYSIAS---------GDGSGLFDIS-RASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPML----NASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEA 904 HSP 3 Score: 111.309 bits (277), Expect = 9.119e-25 Identity = 171/782 (21.87%), Postives = 307/782 (39.26%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQ-----------QKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPV--ASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQP---QLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFS-LKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEI-GNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVR 2577
SSS F ++ EN P + ++ L A + + + II GN+ N+ ++N +G + +S++DRE + C+ V+IS + D ND P F Q + ED +G PV S LD+ + A+ I + FS I P ++ V ++++RE R Y+ + A D ++ + + D+NDN+P++ Y I E + + + + A DADD N + T R I + G G K + +D G L + +TI+I N NAP S + R + ++ D D ++N + + V+ + S + + G + + S + +SV + D+G P L+S + V +EN +P F E + EN S + V+A D D+ N I YS+ G+ F I+ G + + D E + LYN +V A+D G +++ + + + V D ND P+ + ++ N + +++A D D N + Y + D + F V K G L+ G +D E + T + V A ++ ++ V V + +N++ P F +FV +S G + + A D+D ++G+V + L G ++ E G +I+ + R + + R++ +
Sbjct: 337 SSSRFWAKVPENTPPRT-IVVLTAVDKDSGINGQVDYSIIDGNIG--NVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLIS-----------VTDENDNSPRF-TQIFSAHVREDAAVG----FPVLRVSTLDADEGPNAA-----------ITFSLLDPSLPFS---------IHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTV-STDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIA-----------YSVVGGNASRRFDVDAGGFLHL-------RASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPE--NAPSGTTVLVMDAVDADSPSNAVTMYSL----------DDGEADLF-VLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFV---QREYNFV-VSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLD-REREASATLRVIAK 1042 HSP 4 Score: 100.523 bits (249), Expect = 1.905e-21 Identity = 101/409 (24.69%), Postives = 167/409 (40.83%), Query Frame = 1
Query: 1243 LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKG-SPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV 2463
L T +T+ ++D NDN P A + E+ + ++ D D +N S L H + P G +I S DRE + Y + + +D G +P L+SS V V D ND++P F + Y ++ + + +V+A D D+ N +++SL + FS++ GVI + L TV SD G P RS+ ++ V+ D + F+ E + + ++ A G V Y + + N D F V ++G++S++ +D E Q + V ARD G PP S + + V + D+ND+ P F+ S F E + L A DKD +NG V + ++
Sbjct: 6 LTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDG-HF-----------SVNPSTGQIIT-------TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRDDL-TLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFRE---DQPPGTTITVVAARSSR--RAGPVSYHLASGG---NLGDV-----FAVD-PQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFS-----SSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSII 375 HSP 5 Score: 97.8265 bits (242), Expect = 1.103e-20 Identity = 148/609 (24.30%), Postives = 248/609 (40.72%), Query Frame = 1
Query: 571 ELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERF---EDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH------VNIVLNIKDINDNSPQWI----GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHG--KPPLSNSITVTVTLNDLNDHKPVFT 2334
++T ++ D+ND P F + + E ++ ASD D G ++ + +S TE F D + S++ L + KYSF + A+D RG + +NI N N+P+++ P TV+ T I + A D D ++N ++ + + GN+ + + + + + +L G A V ++ D G L + IS+ + N AP + + EN L +T D D +N +S D + L +SR+ G V++ D E Y++ + D G T S+ V D NDN P+ S Y I EN+ + + + A D DS NA YSLD+ F +N GV+ T+ D E K Y TV A + + STA + V++ N+ P F +++Y F + ES V +G + A D D +G V+Y + S ++K F V G++ + +DRE +++ + VIA++ G + + + V V + D ND PVF+
Sbjct: 524 DVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANG----QVFFFMRS---QTENFRVGRDSGEIHSVRPLRYR------DPAGGGSGANLNKYSFVVTAMD----RGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGT---RILDMSAVDPD--RDVNGQIAYSV---VGGNASR---RFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLF---DISRA---------SGDVLLV-------GELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSES---APVGAPVGSVFATDRDAGIDGTVFYMLFGES---------RSKGFSVN-EHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFS 1071 HSP 6 Score: 97.4413 bits (241), Expect = 1.800e-20 Identity = 87/295 (29.49%), Postives = 137/295 (46.44%), Query Frame = 1
Query: 1543 FDREKVDFYSVLIICIDKGSPQLTSSQQF--SVIVLDENDNSPIFTKSIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDEN-GLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNI---SSEFETGYL 2397
DRE+ ++ +I + GS + + +V + D ND P+F+ ++Y + E SVG+ +G VSA D DS + L + GN FSIN + G+I DRE LYN TV+A D GEP + T ++V + D ND P M V N +EA D DL N G +++ + P R ++ +G L IDRE++ ++ V D G PPL++++T+ +++ D ND+ PS A V++ S F G++
Sbjct: 1027 LDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVG-VSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAKVTENQPAGMTVLN----LEAGDPDLPPNKGPYTFQLLGSDP---------AWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN------PSEARDVRVHVNYFGSPFPGGFI 1300 HSP 7 Score: 85.1149 bits (209), Expect = 9.139e-17 Identity = 77/258 (29.84%), Postives = 114/258 (44.19%), Query Frame = 1
Query: 1594 KGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGE-PSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI--GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASG 2355
G P+LT + +V+V DENDN P F + + E++ S++ V+A D D+ NA I Y L G+ +FS+N G I T DRE + Y V A D G P SS+A+++V V D ND P F S + + + A D D NG + + + A++ + +P +R + + +L G D + + V D G PP S TVTV D + FP A G
Sbjct: 1 AGEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-RGGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPS--SAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDP-----RRGVIHAAR----ALQGPRD-----DLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE------FPRFAPG 235 HSP 8 Score: 82.0333 bits (201), Expect = 8.619e-16 Identity = 126/567 (22.22%), Postives = 227/567 (40.04%), Query Frame = 1
Query: 922 GHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDR----ILVRASD 2586
G + + ++D NDN P++ + V E ++ + A DAD +N+ + +++ G+ I + + EG V+ + +DGG GL ++ L +++ D ND+ P A + + +T +D D N + L+ + S S P+RG++ + ++ + D ++ + D G+P ++ +V D + P F F E+ + I V+A + S+ + Y L GN+ F+++ G + D E + Y V A D+G P S+ + V VLD ND P F + V + ++ A D+D NG V Y I D F+V +G++ +DRE ++ + V A D G P ++ V +++ D ND+ P FT SA ++ + G+ + ++ D D N ++ F L+ + SL P +I G + + S R+ + DR + VRASD
Sbjct: 8 GTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDAD--AGLNAIISYRLRGGD-GHFSVNPSTGQIITTASLDREG------RESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSA--------SAGFSVD---PRRGVI-------HAARALQGPRDDL-TLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVP---ENTPPRTIVVLTAVDKDSGINGQVDYSI---------IDGNIGNVFRVN-PNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-----HVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSL-PFSIHPSTGEITV-------SRRLNREDRSGYAVKVRASD 516
BLAST of Protocadherin-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 166.777 bits (421), Expect = 1.095e-41 Identity = 163/640 (25.47%), Postives = 284/640 (44.38%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI---ENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD---TEGKRGHVNIVLNIKDINDNSPQWIGLPY-KITVKECTTSREIFSLKAFDADDQNNINSKLDFKI-DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATS-PYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVF 2454
+T L+ D ND +P F E+ ++ ED PIG + L A+D D+ I SY++ + +F S+ +II +DRE RE Y + ALD T G +V+ + D+ND++P+++ PY +F++ A DAD N L F + +A G S R + ++ AL+G + L + ++V DGG + T +T+ +D + P + RS +E++ +T++ + S HL + +L +V + P+ G V ++ ++ D E Y +++ D G P ++ + V VLD NDN+P F+ S + ++ EN+ I ++A DKDS N ++ YS+ IGN++ G I + DRE + Y TV A+D G P++ T +L+ V D+ND P F + + ++ E + AV + + D D N + + + S P+ +P G++++ ++RE++S + V A D P + S VT+ ++D+ND+ P F + ++ E L+A++ A D D NG V F
Sbjct: 12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHF-----------------SVNPSTGQII-----TTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDAD--AGPNGDLRFSLSGSASAGFSVDPRRGVIHAAR-------ALQGPRD-DLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAARSS--RRAGPVSYHL--ASGGNLGDVFAVD-------PQSGEVSVH-------RALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTP-PRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVRE---DAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHP-------------STGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRF----GQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFF 576 HSP 2 Score: 124.405 bits (311), Expect = 1.073e-28 Identity = 150/655 (22.90%), Postives = 265/655 (40.46%), Query Frame = 1
Query: 559 SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH--VNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN-------INSKLDFKI--DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMA-EMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
S +L ++D+ND P F+ + E+ P ++ L A D DS G Y I + + F+ + +++ + +DRE Y T+ A D H V +++++ D NDNSP++ + + V+E + + DAD+ N ++ L F I T ++ SR+L+R G A +++ P V +TD+TI + D NDNAP T+ + E ++ ++ D D N + + T V S + RP R Y+ + K YS ++ +D+G P L+S ++ ++ N N+P F + Y + + I +SA D D N +I YS+ GN F ++ G + + + S+++ TV A D G P SS A+ ++ V ++N P F E ++ E N ++L + A D D NG + Y I + + + F + +G + L G +D E + + V A D G + V++++ D+ND+ P+ +AS + I +G + +DA D D N ++ L E+
Sbjct: 317 SAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVL-TAVDKDSGINGQVDYSI---------IDGNIGNVFRVNPNSG--------EIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDR-------------SGYAVKVRASDPAWTV-------STDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENF--RVGRDSGEIHSVRPLR-----YRDPAGGGSGANLNK---YSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVG-GNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPE---NHPAGSSLARVTATDTDAGVNGAIVYSIAS---------GDGSGLFDIS-RASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPML----NASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEA 904 HSP 3 Score: 110.923 bits (276), Expect = 1.366e-24 Identity = 171/782 (21.87%), Postives = 307/782 (39.26%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQ-----------QKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPV--ASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQP---QLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFS-LKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEI-GNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI-EKDGRVILKESIKSRSHRITQSDRILVR 2577
SSS F ++ EN P + ++ L A + + + II GN+ N+ ++N +G + +S++DRE + C+ V+IS + D ND P F Q + ED +G PV S LD+ + A+ I + FS I P ++ V ++++RE R Y+ + A D ++ + + D+NDN+P++ Y I E + + + + A DADD N + T R I + G G K + +D G L + +TI+I N NAP S + R + ++ D D ++N + + V+ + S + + G + + S + +SV + D+G P L+S + V +EN +P F E + EN S + V+A D D+ N I YS+ G+ F I+ G + + D E + LYN +V A+D G +++ + + + V D ND P+ + ++ N + +++A D D N + Y + D + F V K G L+ G +D E + T + V A ++ ++ V V + +N++ P F +FV +S G + + A D+D ++G+V + L G ++ E G +I+ + R + + R++ +
Sbjct: 337 SSSRFWAKVPENTPPRT-IVVLTAVDKDSGINGQVDYSIIDGNIG--NVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLIS-----------VTDENDNSPRF-TQIFSAHVREDAAVG----FPVLRVSTLDADEGPNAA-----------ITFSLLDPSLPFS---------IHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTV-STDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIA-----------YSVVGGNASRRFDVDAGGFLHL-------RASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPE--NAPSGTTVLVMDAVDADSPSNAVTMYSL----------DDGEADLF-VLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFV---QREYNFV-VSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLD-REREASATLRVIAK 1042 HSP 4 Score: 100.523 bits (249), Expect = 2.070e-21 Identity = 101/409 (24.69%), Postives = 167/409 (40.83%), Query Frame = 1
Query: 1243 LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKG-SPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV 2463
L T +T+ ++D NDN P A + E+ + ++ D D +N S L H + P G +I S DRE + Y + + +D G +P L+SS V V D ND++P F + Y ++ + + +V+A D D+ N +++SL + FS++ GVI + L TV SD G P RS+ ++ V+ D + F+ E + + ++ A G V Y + + N D F V ++G++S++ +D E Q + V ARD G PP S + + V + D+ND+ P F+ S F E + L A DKD +NG V + ++
Sbjct: 6 LTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDG-HF-----------SVNPSTGQIIT-------TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRDDL-TLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFRE---DQPPGTTITVVAARSSR--RAGPVSYHLASGG---NLGDV-----FAVD-PQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFS-----SSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSII 375 HSP 5 Score: 97.4413 bits (241), Expect = 1.505e-20 Identity = 148/609 (24.30%), Postives = 248/609 (40.72%), Query Frame = 1
Query: 571 ELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERF---EDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH------VNIVLNIKDINDNSPQWI----GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHG--KPPLSNSITVTVTLNDLNDHKPVFT 2334
++T ++ D+ND P F + + E ++ ASD D G ++ + +S TE F D + S++ L + KYSF + A+D RG + +NI N N+P+++ P TV+ T I + A D D ++N ++ + + GN+ + + + + + +L G A V ++ D G L + IS+ + N AP + + EN L +T D D +N +S D + L +SR+ G V++ D E Y++ + D G T S+ V D NDN P+ S Y I EN+ + + + A D DS NA YSLD+ F +N GV+ T+ D E K Y TV A + + STA + V++ N+ P F +++Y F + ES V +G + A D D +G V+Y + S ++K F V G++ + +DRE +++ + VIA++ G + + + V V + D ND PVF+
Sbjct: 524 DVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANG----QVFFFMRS---QTENFRVGRDSGEIHSVRPLRYR------DPAGGGSGANLNKYSFVVTAMD----RGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGT---RILDMSAVDPD--RDVNGQIAYSV---VGGNASR---RFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLF---DISRA---------SGDVLLV-------GELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSES---APVGAPVGSVFATDRDAGIDGTVFYMLFGES---------RSKGFSVN-EHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFS 1071 HSP 6 Score: 97.0561 bits (240), Expect = 2.058e-20 Identity = 87/295 (29.49%), Postives = 137/295 (46.44%), Query Frame = 1
Query: 1543 FDREKVDFYSVLIICIDKGSPQLTSSQQF--SVIVLDENDNSPIFTKSIYEFEIMEN-SVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDEN-GLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNI---SSEFETGYL 2397
DRE+ ++ +I + GS + + +V + D ND P+F+ ++Y + E SVG+ +G VSA D DS + L + GN FSIN + G+I DRE LYN TV+A D GEP + T ++V + D ND P M V N +EA D DL N G +++ + P R ++ +G L IDRE++ ++ V D G PPL++++T+ +++ D ND+ PS A V++ S F G++
Sbjct: 1027 LDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVG-VSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAKVTENQPAGMTVLN----LEAGDPDLPPNKGPYTFQLLGSDP---------AWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN------PSEARDVRVHVNYFGSPFPGGFI 1300 HSP 7 Score: 85.1149 bits (209), Expect = 9.765e-17 Identity = 77/258 (29.84%), Postives = 114/258 (44.19%), Query Frame = 1
Query: 1594 KGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGE-PSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI--GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASG 2355
G P+LT + +V+V DENDN P F + + E++ S++ V+A D D+ NA I Y L G+ +FS+N G I T DRE + Y V A D G P SS+A+++V V D ND P F S + + + A D D NG + + + A++ + +P +R + + +L G D + + V D G PP S TVTV D + FP A G
Sbjct: 1 AGEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-RGGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPS--SAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDP-----RRGVIHAAR----ALQGPRD-----DLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE------FPRFAPG 235 HSP 8 Score: 81.6481 bits (200), Expect = 1.072e-15 Identity = 126/567 (22.22%), Postives = 227/567 (40.04%), Query Frame = 1
Query: 922 GHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG---GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDR----ILVRASD 2586
G + + ++D NDN P++ + V E ++ + A DAD +N+ + +++ G+ I + + EG V+ + +DGG GL ++ L +++ D ND+ P A + + +T +D D N + L+ + S S P+RG++ + ++ + D ++ + D G+P ++ +V D + P F F E+ + I V+A + S+ + Y L GN+ F+++ G + D E + Y V A D+G P S+ + V VLD ND P F + V + ++ A D+D NG V Y I D F+V +G++ +DRE ++ + V A D G P ++ V +++ D ND+ P FT SA ++ + G+ + ++ D D N ++ F L+ + SL P +I G + + S R+ + DR + VRASD
Sbjct: 8 GTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDAD--AGLNAIISYRLRGGD-GHFSVNPSTGQIITTASLDREG------RESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSA--------SAGFSVD---PRRGVI-------HAARALQGPRDDL-TLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVP---ENTPPRTIVVLTAVDKDSGINGQVDYSI---------IDGNIGNVFRVN-PNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-----HVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSL-PFSIHPSTGEITV-------SRRLNREDRSGYAVKVRASD 516
BLAST of Protocadherin-1 vs. Ensembl Sea Lamprey
Match: si:ch211-199f5.1 (protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]) HSP 1 Score: 161.384 bits (407), Expect = 1.153e-40 Identity = 167/673 (24.81%), Postives = 289/673 (42.94%), Query Frame = 1
Query: 439 NLIQLNFVTGSLHLISSVDREELCQQKDNDCSHI-VIISFGSFIFELTFL---IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNN------INSKLD------FKID--TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKL----VVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISI----TSR--SAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIG----NIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGL------IEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIY-IDVIARDHGKPPLSNSITVTVTLNDLND 2316
+L+ + G++ +DRE+ C Q + V+ + +F+L ++D+ND P FA+ E+ + I E V +G + L A DLD + +Y ++ + + R D K++ +L V ++DRE +Y+ L A D + G + + + D NDNSP + +TV+E T + +L A D D+ N +S +D F++D T KL +LKG + +L + ++ D G + + + ++D NDNAP I + SR + + E + ++TV D D N +CHL + L P R ++ N S DRE++ Y +++ D G+P +++QF+V +LDENDN P F +S YE ++EN+ + + +V+A D D++ N I Y++ E+ + Y SIN G I+ D E + F V A D+G P + A++ V+++D+ND P+ N G + + + GL + A D D + NG + Y I N + + R ++ N V D +T + + V+ RD G P LS + + + + D
Sbjct: 73 SLVHVEEADGTVSAREVIDREQQCGQAPSCVIRFDVLCTLPRGLFQLVHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFGLALRAR-TDGAKYA------------ELVVKSRLDREQEGEYTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPVDAEVRRLFQLDPKTGKL----------------------SLKGQLDHELNSEYEISIQARDMGPSSIPAHCKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLRGHPHFKLL-------------PYRDDYVVVT-----NSSLDREQMADYFLVLEASDGGTPPRVAARQFTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYALRPLDYEAMTSLTFQVQARDDGVPPLVTNATVSVRIVDENDNAPVVTHPPLRN---GTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQG----NERNLFRINRLGGEVFTNAA----SVTDAAASATRHSLVVMVRDRGSPALSATAAIEIRVGAHGD 681 HSP 2 Score: 127.872 bits (320), Expect = 3.576e-30 Identity = 141/550 (25.64%), Postives = 232/550 (42.18%), Query Frame = 1
Query: 928 VNIVLNIKDINDNSPQWIGLPYKITVKECTT---------SREI----FSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSP------IFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYG---VIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI------GAT-SPYVN-NPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGS-FVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV-GNE 2472
V+ + + DIND++P + + + E +R++ +L+A+ D+ L + D AK ++++ L E + + L DGG TT + I++ D NDN+P+ + TS + ++E+ +L L D D N E + ++ + PK G + + D E Y + I D G + + + V V D NDN+P I + E + S +G V+ D DS EN + L G+ +F + Y V+ T DREQ + Y + ASD G P R + V++LD+ND +P F R YE +++E N + + + A D D + NG++ Y + GA+ S YV+ NP +G + +D E +++ V ARD G PPL + TV+V + D ND+ PV T P +G+ V + + GYL+ + A D D NG + + +V GNE
Sbjct: 120 VHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFGLALRARTDGAKYAE---------------LVVKSRLDREQEGEYTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPVDAEVRRLFQLD-------PKTGKLSL-------KGQLDHELNSEYEISIQARDMGPSSIPAHCKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLR--GHPHFKLLPYRDDYVVVTNSSLDREQMADYFLVLEASDGGTPPRVAARQFTVRLLDENDNEPRFHRSTYEASLLE---NNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINP-------------SSGAIYALRPLDYEAMTSLTFQVQARDDGVPPLVTNATVSVRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNE 622
BLAST of Protocadherin-1 vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 177.178 bits (448), Expect = 9.811e-45 Identity = 190/714 (26.61%), Postives = 310/714 (43.42%), Query Frame = 1
Query: 577 TFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH---VNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN--IYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF--------TFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESL-----SPVT-----IEKDGRVILKESIKSRSHRI-TQSDRILVRASDQCENCHQSEVGSLILR 2634
T ++D+ND P F S+ E++PIG + A+D D + +Y++ D KF E+ + + +DRE + YS + A+D GK I L I D+NDNSPQ+ Y +TV E T + L+ +D N ++ + I + GN+ ++ + ++ AL A L + K +T + I++ D NDN+P+ + S I E + ++T D D N + +S DT+ + M+ L+ K E +RE V Y++ I D+GSP +TS ++ +V+V D NDN P+F Y + ENS S+ + +V+A D D NA ++YS+ GN F IN GVI T D E+KS Y V A+D+ +++ ++ ++V++ ND P F +Q Y ++ E+ + +++ + D D G + Y I V D++K F + ++G +S V+DRE S I V D G PPLSN VT+ + D ND+ P F +SA SF F KL A D D N + + L N++ S V ++++ + +I++R H Q+ I +R + N H+ + S LR
Sbjct: 1086 TIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELS------------VGDTSKF------EVNPATGLVTTKRPLDREDQASYSLRVTAMD-HGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNI-LRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREAL---ASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAIN-AMNGVLTVKKE-------------------INRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIIS-GNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKT---NVTIRVINLNDITPAFTQQNYTASVRENS-----PTSTSVVKVSASDRDSFGSLSYSI------VGGKDSDK---FSID-QRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSF-----SF-------KLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLR 1725 HSP 2 Score: 161.384 bits (407), Expect = 7.939e-40 Identity = 196/766 (25.59%), Postives = 322/766 (42.04%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGL---QNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL-VGNES---LSPVT-IEKDGRVILKESIKSRSHRITQSD 2562
S S + ++ E+ I S ++ + A + + + +ISGNV+ I N +GS+ + S +DRE + + S +T + D+ND P F + + E GH I A+D D G Y + + D F ++ L + + ++D E + +Y T+ A D T + + + + D+NDN PQ+ Y TV E + + A DAD + N K+ + I + GN + + + + +A L + D G L T + ISI D NDN P + SR I E+ T + LT D D+ N TY + S P+ G++ + + DRE + Y++++ D GSPQ + + V VLD NDN+P F KS++ EI E++ S + V DKD N I SL G+ F+I+ G + +K D E + Y TV A D G PS+S+TA + + +++ ND P F + + ++A+ N +++ N D D L + + + FK+ +G +S+ +DRE + + V A + G S T+ + D+ND+ PVF P S + S + G +AK+ A D+D N V +EL VG+ S ++P T + R + +E S S R+T D
Sbjct: 479 SPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDAN--SGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYV-FRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDN-----------TDVFSINTSTGL--------ITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDAD--SGANGKISYSILS---GNENMAFAMDRFTGEITTRVPLDRETIASYSLTIN---ADDGSLVRFMAATTVNISIADENDNQPTFTGPSR-FNISEDSPTGTRVGQLTATDRDIGPNGAV-------TYAIISGNQGNSFQLD---PRSGILSV-------RSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPE--DVAI--NTHVVKLNATDSDGTPLTFDIV----------EGNAGSSFKID-QSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFN-PGSYAKS---LHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMD 1177 HSP 3 Score: 152.91 bits (385), Expect = 3.009e-37 Identity = 189/727 (26.00%), Postives = 308/727 (42.37%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQ------QKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRG--------HVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFS-CHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
S S + + + EN S ++ + A P A + + IISGN N +++ TG + ++ VDRE L KD+ V +F + + D ND P FA E I E V IG + + A+D D Y I S F +++ + L V K+I+RET Y+ T+ A D RG + +V+N D+NDN P + Y +V+E S + ++ A D+D N+ L + I + GN K +I S + + ++ L V T++TI + + ND P + + +A ++EN T + ++ D D + +S D+ + + + G++ + DRE V Y++ + D G+P L++ ++ +LDENDNSP F S Y I+ENS SS ++A D D NA+I Y+L N F I GVI + DRE KS Y+ + A D+G P ++S+ +I V V+D ND +P+ V N ++ I A+D D N + + + ++N E F + T G +S +DRE+Q+ + + D G P LS+ V + + D +D+ P F P+ + V IS G + ++ A D D
Sbjct: 1204 SQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGN--HGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAF------VAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTS----------AFAINAMNGV--------LTVKKEINRETVPTYTLTIRASD----RGSPMMTSDKELTVVVN--DVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSD--VGANAVLRYSIIS---GNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEV---TATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQ-------------RSGIISTADV-------LDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSR--NDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRE--NQPKETHVMRILASDADTGLNAELTFSL------LSN---EHKSVFTLDNTT-GDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQ-PTEYN---VTISESLPRGASIVQVTARDID 1852 HSP 4 Score: 152.91 bits (385), Expect = 3.304e-37 Identity = 195/789 (24.71%), Postives = 327/789 (41.44%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREE------LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTT-SREIFSLKAFDADDQNN--INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSD-RILVRASDQCENCHQSE 2613
S S ++ +KEN P +++ A + F II GN + ++ TG + + S D E Q +D V + + + ++T I D+ND P F+ I E IG + A+DLDS G Y+ +++ + F + ++V ++DRET YS + A D + + + + ++DINDNSP + G PY V E ++ +I + A DADD +N + L D + S L + L + + +V + DGG + T + + + D NDN P + + + + EN + +T D D N + S + L E M+ ++ +R + E DRE + YS+ I D + ++ ++ + DENDN P FT F I E+S + +G ++A D+D N + Y++ GN + G++ + DRE Y V ASD G P +S TASI V VLD ND P F K + I E + +VH+ + ++ D+D NG + + E + F + T G + +D E + + V ARD G P S + V +T+ ++ND+ P F P+ + +I + + KL+A D D + F++V + S I++ +I S+ R R T ++ ++VRA+ E Q E
Sbjct: 377 SPSAYQSRVKENTPAGTQV---SATDRDSSTNGALVFGIIKGN--DDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRG----VPVKYDTA--QVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYR---------LISGNVKGAFNIDANSG--------SIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQG-PYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQ-----------LDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSI-----LSGNENMAFAM----DR--------FTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGP-SRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIRE---DASVHSTVLQVKVEDKDEGSNGAITLSLS----------GEGSDNFTIDST--GFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVT----SIPEDVAINTHVVKLNATDSD---GTPLTFDIVEGNAGSSFKIDQSSGLI---SVAKRLDRETTANYTLVVRAT---ETGSQGE 1079 HSP 5 Score: 149.443 bits (376), Expect = 3.223e-36 Identity = 167/647 (25.81%), Postives = 275/647 (42.50%), Query Frame = 1
Query: 577 TFLIIDM---NDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIF-SLKAFDADDQNNINSKLDFKI---DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIK--DCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCE--FSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGN--IYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYE-IGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGN 2469
T ++ID+ ND P F +I E+ P V + A+D DS +Y + FS M +++ + +D ET++ Y+ + A D GK ++ + D+NDN+P + YK V E I L A D D IN++L + + DT+ + S +I +GA + V L+ DGG + T+ I+ D NDN P+ S +A + E+ + +T D+D N + +S +T + + ++ G+V + ++S D E+ Y++ + D+GSP LT + + V D NDN P+F+ S Y+ + EN+ ++ VSA D+DS N + + + + GN F+I+ G+I + D E K+ Y+ TV A D G P + TA + + + D ND P+F Y I ES + + + + A D D G + Y I N DA +G + + +DRE + + V ARD G S+S VT+ L D+ND+ P+F P +S G+ + ++ A D D + NG V + L N
Sbjct: 54 TVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVA-IVTATDRDSGTNAAITYSL-------------------FSGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFD--GKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLD--VGINARLSYSLVSGDTSYF----------TVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVT------------GVVTV-------SRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ---VSATDRDSSTNGALVFGIIK-GNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPES---TVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDA-----------NSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-----YVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDN 624 HSP 6 Score: 149.443 bits (376), Expect = 3.724e-36 Identity = 190/754 (25.20%), Postives = 329/754 (43.63%), Query Frame = 1
Query: 322 LKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG----SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVN---IVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKI---DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM-KLVVP-----LKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDF-----YSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI---YFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIE 2496
L EN PI + + A + AK + + G+ + ++N TG + +DRE+ + + G S + +T I D+ND P F++ + L++ E+ G I +ASD D+ G +Y I++ + F+ S ++ V+ +DRE Y+ T+ A D+ G V+ + + + D NDNSP + + E + + + A D D+ + N+++ + I DT+ + + G L E+ + VP ++ D G T+D LT+ + D NDN P+ + S ++EN + + ++LTV +D ++ V+ S+ + N+ + ++I + +DF Y + + D + T+ ++ V++ ND +P FT+ Y + ENS S+ + VSA D+DS + YS+ +G FSI+ G+I T + DRE SLY V +D G P S+ + +K+LD+ND P F Y +I+E N A + + A D D N + Y + + F + + +G ++L +DRE +ST + + ARDHG PP ++SIT+ VT+ D+NDH+P+ SS GS V + ET + ++ A D D LN + F L+ NE S T++
Sbjct: 1108 LHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDT---SKFEVNPATGLVTTKRPLDREDQASY----SLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYS---------IISGNHGNAFRIDSTTG--------RITVVGVVDREALASYNLTISAKDS-GVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGS--NAQVFYSIVRGDTSAFA---------------INAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVREN--SAQSTSVLTVAADDSDVGA--------------NAVLRYSIISGNDEKR------FKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSF--GSLSYSI--VGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILE---NSAPSSFSFKLAATDADEGTNARITYNL------------SRNDAFMIGAS-SGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLIN-SSSLRGS-VRENQPKETHVM--RILASDADTGLNAELTFSLLSNEHKSVFTLD 1770 HSP 7 Score: 145.206 bits (365), Expect = 6.094e-35 Identity = 143/562 (25.44%), Postives = 244/562 (43.42%), Query Frame = 1
Query: 850 KKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAK---LGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPL----------KVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHL--NDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV-GN 2469
+K DRE+ +Y T++A D + +G +V+++KD NDN+P++ Y ++E T + ++ + A D D + N+ + + + + + + NS+ E++ V PL ++ G T I++ D NDNAP +++ + E+ I+ LT D D+ +N S L DT+Y + +G++ +FDRE Y V + D GSP + + +LD NDN P+F+ + Y + E+ + + +V+A DKD+ NA ++YS GN F+++ + GV+ D EQ+S Y + +D G P + T+ +L+ V D ND P+F Y+ + E N + A D D NG + + I N D F + G +S+ D E ++ + V ARD G P ++ VT+ + D+NDH PVF+ PS+ S I G + + A D D G + + L+ GN
Sbjct: 26 RKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRD--SGTNAAITYSLFSGENKFMMNSK----------------------TGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVD--------------SQGVI-------RTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTS-GNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKE---NTPAGTQ---VSATDRDSSTNGALVFGI-----IKGNDDGV----FTID-GSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFS-PSNYSK---QIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGN 521 HSP 8 Score: 136.346 bits (342), Expect = 3.548e-32 Identity = 118/411 (28.71%), Postives = 198/411 (48.18%), Query Frame = 1
Query: 1255 TDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKS---FDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV-GNE 2472
T + I +KD NDNAP + S I+EN ++ I+T D D N + L S +N+ + +T E ++ D E D Y++ I D + V D NDN+P F S+Y+ + E+ S + ++A D D NA++ YSL YF+++ GVI TK FDRE K+ Y + A D G PSRS A++ +++LD ND +P+F QY ++ E ++A+ + + A+D+D N + Y TS N+ F + G +++ +D E++S+ + + D G PPL+++ + + +ND+ND+ PVF+ SA S V ++ T ++ A D+D + NG++VF ++ GN+
Sbjct: 54 TVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV-AIVTATDRDSGTNAAITYSL---------------FSGENK-------FMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVPL----ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDE---DVAIGAAMVTVTASDKDNGNNADLRYSF--TSGNTNHA-------FTLDAVT-GVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFS--PSAYQSRVKENTPAGT-----QVSATDRDSSTNGALVFGIIKGND 417 HSP 9 Score: 60.4622 bits (145), Expect = 4.407e-9 Identity = 61/253 (24.11%), Postives = 110/253 (43.48%), Query Frame = 1
Query: 1831 VIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+ T KFDRE +S Y TV+A D +++ V D+ND P F Y FNI E+ V ++ A D D N + Y + +F + +K G++ +D E + + + + A D GK + +T++D+ND+ P F +G + +++ G ++ +L A D D +N + + LV ++ S T++ G + K + + S ++ +RA D
Sbjct: 21 ITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV----AIVTATDRDSGTNAAITYSL-----------FSGENKFMMN-SKTGEIRTVTPLDHETKDSYTMRISAFD-GK---HTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVA----VGSIVRQLTAVDLDVGINARLSYSLVSGDT-SYFTVDSQGVIRTKGAFDRETK---ASYQVALRAQD 245
BLAST of Protocadherin-1 vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 158.688 bits (400), Expect = 6.076e-39 Identity = 208/813 (25.58%), Postives = 338/813 (41.57%), Query Frame = 1
Query: 271 HFSISKLDKSSSLFE-----IELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGS--LHLISSVDREELCQQKDNDCSHIVIISFGS------FIFELTFLIIDMNDEVPTFAKQEIELSILEDVP----IGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTT-SREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALK-------GMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNN-LGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKV-QITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSIT-VTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQS 2610
H S++ L+ + +F+ +E EN I + LKA + K A RF+I GN ++ V GS + L +DRE +DN + + G I +T ++D+NDE P F+K E +I E IGHV + I+ K N I ++ +S L ++ ++D E T+ A D T G+ N+ + + DINDNSPQ+ + + E T +++ FDAD + LG + NL GAL G + +P++ DGG +T L + + D ND +P+ S +A + E + + D D N S Y +V + +N G + I DRE ++ Y++ +I ID G+P+ +SS VIV D NDN+P F ++ Y F + EN ++ +G+VSA D D N + Y D + G I T + DRE K+ Y F+++A+D G R + V V D NDC P F K +Y + E ++ V ++ L LI +D+ N + Y I V P K F + Q+T G L+L +DRE + V+A D G +IT + + + D+ND+ PVF + +F + + G ++A + A D D NG V +++V + I + VI ++++ +T + V A+D + ++
Sbjct: 586 HVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNAD-----EVFSVDGSGLITLAKLLDRE----TQDNYLLTVKAVDGGGQDSVNKAIVNIT--VLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHV-------------HAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQ---------SEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDAD--------------SGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRIS-------YAFDSKVDTSKFGLRNG----GKIFI-------KSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNE---DLPVGSSLLTLIATDDDQQGPNSDITYMI------VAGP-----KAFSLNQVT--GVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINET----TFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVI--STLRALDFEVTNRYVLRVSATDMGKKQQKT 1311 HSP 2 Score: 153.295 bits (386), Expect = 2.479e-37 Identity = 160/596 (26.85%), Postives = 265/596 (44.46%), Query Frame = 1
Query: 856 IDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWI-GLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXX--XXXXXEGALKGMAEMKL---VVPLKVVDGGGLQNTT--DLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSP-QLTSSQQFSVIVLDENDNSPIFTKSIY---EFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFS-----INMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVT-IEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+DRE Y+ T+V T K +++ ++D+NDNSP ++ G K+ V E + + F K D NS + I + +GN KL + +++ + G+ +L V+ + DGG N L+I+++D NDN P S S S I EN + ++ D+D+ N E + E S + P G+++ N D E Y +++ DKGS QL+SS + VLD NDN+P+ S +++ EN+ +++ VS D DS +N ++ +L E G+ YFS +N +I + DRE + + D G+P R++ S + V D NDC P F R YE + E N V+ + ++ A D+D N + Y I T+ ++ + +G ++ +DRE+ + + V+ D G PPLS++ +V V L D ND+ P F S + F N S G + +L A+D D N +++ + L+P T D R L + ++ H + S V A+D
Sbjct: 20 LDREKVSAYNLTIVEFSTPPK--SYTVLVYVQDLNDNSPSFVRGTSAKLVVFE---NDKDFRQKLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSI---------ETHSDPQAIFGIHPTTGVIV-------NNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTL-EGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWE---NATVNTLVAIVNAVDQDFGSNSELVYTIANTT------ESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPS----GSPVVQLLAQDPDIGENSLILYSI-----LTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATD 575 HSP 3 Score: 141.739 bits (356), Expect = 8.929e-34 Identity = 192/736 (26.09%), Postives = 316/736 (42.93%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLP-TAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGS--FIFELTFL---IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVN---IVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLG-----NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTV-KDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDE-IGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+ + + E+ P+ S L+ L A + ++I++G LN VTG L L+S +DRE + H+V G + +T++ ++D+ND P F + ++ E +PIG V+ +A D D G YKI N +TD FK + + + ++ +D E +Y + A D K+ + + + ++D NDN P + P + E + + ++KA D D + +NS++ + ID+ NS + + E +LK A + + L NT L I I+D NDNAP + + +++ ++ +I + D N E+ DT L K G++ + S D E V Y++ I D GSP LTS Q F+V+V+D NDN P FT+ ++ + EN + + V+A D+DS NA++ YS+ + FSI+ + G+I T DRE+K Y TV A+ P R S+ S+ + V+D+ND P F + E+ ++ + D D N V Y I + N D T G+LS +DRE +++ + V A+D P + +T+ + D ND+ PVF +S IS G + L A DKD NG++V+ L
Sbjct: 1124 YSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAG----PKAFSLNQVTGVLTLVSPLDREVTHRH----ILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVN--GNTD-------GTFKINETTGV--------ISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHD--DDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQ-----AFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDL-------------KTGVLKLI-------GSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARLIYT----LTVQDLDYGNNTKVLYSIMS-----GNTDGAFTIG-----RSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSS----TISELTPPGTSILNLTASDKDSGSNGNIVYTL 1789 HSP 4 Score: 132.109 bits (331), Expect = 8.015e-31 Identity = 161/643 (25.04%), Postives = 272/643 (42.30%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQ--NTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQ-LTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEP-SRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHG---KPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV 2463
L ++D+ND P F +LE P I VA+D+DS + G SY ++ ++ F + K+DRE E+Y+ ++A+D T + ++ + + D+NDN+P + Y VKE + + ++ A D+D+ +N + F A+ ++ +I L A+ V + DGG + T +T+ ++D ND +P S S + E+ L L D+D + +D TY+ + + SL+ G++ + DRE + + ++ DKG Q L + + VLD NDN P+F + E S + +V A D D +N K++Y + GN F IN GVI T D E + Y V A+D G+ ++S + + V D ND +P F K + Y N+ ++ N+ I+A+D+D N +WY I + SP + FK+ ++ G + IDREE S + V A D + L N+ T+ + + DLND+ P F S + ++V F + + + A D D G+V + +V
Sbjct: 898 LELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIF------------------IKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQ---------VLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPN------SDITYMIVAGPKAFSLNQVT-----GVLTLV-------SPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVN-GNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWI--YENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAH---------FKIN-SETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFV---SRNLTYVMEDEPFN--FQVTSITALDPDTGQGGNVEYRIV 1477 HSP 5 Score: 130.568 bits (327), Expect = 2.621e-30 Identity = 162/647 (25.04%), Postives = 271/647 (41.89%), Query Frame = 1
Query: 586 IIDMNDEVPTFAKQEI---ELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIEN---YFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQN-NINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG---LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNER----PKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGN 2469
++D+ND P + E+ IG + SD DS K G + +E YF KF + D + + V + +DRET + + V +D + + +N+ D+ND +P++ Y+ V E T + ++ +A DQ+ NS+L + I A SR I ++ ++ ++ VV +V G L + + +++ D NDN P + +S +A + EN + + L +D D+ N ++ S+ T N P++G+V +++ D E Y+ + D G ++ S+ D NDN P+F S Y E EN+ I + A D+DS + A ++ +++ GN FS++ G+I + DRE + Y TV A D G + A + + VLD ND PIF K +Y F I E ++V +G + A D N V Y I ++ V I G L L +D E+ ++Y+ V A+D G PPL VT+ + D+ND+ P F ++S V + + G+ + D D + G V F L+ N
Sbjct: 269 VLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYF------------SMKFDVLNDESI------IAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAI--VNAVDQDFGSNSELVYTI--ANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENS----------------LILYSILTPNTPFFLDPRKGLV-------TNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLT--DLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQ-GNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSV---IGHVHAISRDKGTNAEVVYSI-----------SKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQF----NSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSN 849 HSP 6 Score: 128.257 bits (321), Expect = 1.172e-29 Identity = 174/753 (23.11%), Postives = 308/753 (40.90%), Query Frame = 1
Query: 394 AKHRFVIISGNV-RLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSF-------IFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSP-----QWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTT----YLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKV-QITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
+ + I+SGNV + LI G L+ V+ + ++ S+++ IS L+ + D ND P F+ +I E++ +G I ASD D Y IE + I ++++ L+ + + L V+K D+ + + S + + + + + D+NDN+P +G Y++T + T ++ + DAD N + T + G+ + ++ ++I + +L + +D G TT+ I++ D ND AP + ++ EN ++ I+ D+D N E + +TT YLH + P GM+ DRE++ + ++ D+GSP L+ + V + D NDN P F +S Y + ENS S + + A D D EN+ I YS+ +F G++ D E +S Y F V A+D G RS A++ V + D ND +P+F Y VE + N + ++ ++A D D + + + I E+ +V + +G ++L ++DRE Q + V A D G N V +T+ D+ND P+F S A +F I + ++ + A +D N VV+ + + + V I G + L+ + H S + V+A D+
Sbjct: 90 STQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVR-LDYEAKRSYLIVVKAEDKGSSHQLSSSAI------------VRIEVLDVNDNNPVIHVSYTLGGSYQVT-ENATIGTQVARVSVSDADSGKNGEVNV-----TLEGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAI----------DPSSGMI-------TTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGG--GRSCNATVHVSLTDLNDNQPVFDPSSYS---VEYFENTRIGQSICQLKAIDRDSPKFAITRFII------------EQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIF---SKAEYNFT-IQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVD---HEKIPSLYLTVQAKDK 782 HSP 7 Score: 118.627 bits (296), Expect = 9.592e-27 Identity = 165/689 (23.95%), Postives = 289/689 (41.94%), Query Frame = 1
Query: 328 ENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFE--------LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSKLDFKIDTA----KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQI--ETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDE--NGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF 2331
EN PI++ + +KA + ++ + I S + R ++N TG + +DREE+ + S V + +F + L +I D+ND P F + + ++ED P + A D D+ + G Y+I + D KFS DL+ + LK+I +D E +Y+ + A D + + + D+NDN P++ + TV E T + + A+D D +N ++L + I + K + I+ S + + + + P +V ++T + I++ D NDN P + K+ EN I T LTV+D D N + L +MS + G I + E + DRE Y + + D P T+ ++ + D+NDN P+F +S+Y I E + + I +++A DKDS N I Y+L ++ +Y + G++++ +F+ K YNF IA D G+ + + + +K+ D+N+ P F K YE +I + N + + ++ A D D D+ NG V Y + D++ + V + G + Q + +IA DHG PPL V + + ++ D P F
Sbjct: 1341 ENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAH--FKINSETGLIQTTHPIDREEISE-----YSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTY-VMEDEPFNFQVTSITALDPDTGQGGNVEYRIVS------------PDTGKFS--LDLKTGV----LKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSN--AELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRV-------SSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARLIYT-LTVQDLDYGNNTKV-----------LYSIMSGNTD--------GAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHI---FPNTSASALVTMVTATDADTDKSTNGKVTYRLD---------DSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRF 1962 HSP 8 Score: 113.62 bits (283), Expect = 3.285e-25 Identity = 174/713 (24.40%), Postives = 296/713 (41.51%), Query Frame = 1
Query: 466 GSLHLISSVDREELCQQKDNDCSHIVIISFG----SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG---LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQL-TSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD-EIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNG--EPSR-SSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFE-TGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRIT 2553
G + + S +DRE++ + ++ I G S ++ ++ D+ND P F + + E+ P+ + ASD D G +Y RF+ + KI Q+ +DRE + Y F++VA D + + + + ++D+ND SP++ Y +TV E + +L A D DDQ NS + + I S + + L + ++ + D GG L+ T + I++ D NDN P+ + + E ++ + D D N + + K V + T G++ ++ D E + Y + + D G Q TS Q ++ V D NDN P F K+ I EN ++ + ++ A D DS N++I Y++D + +F IN G+I T DRE+ S Y+ V A+D E R +TA++ + + D ND P F + N+ + + + I A D D + G V Y I + PD T +F + + K G L L G +D E+ + + A D G PPL++ V + D+ND+ P FT F+ SE + TG + K+ A D+D N + + + + +I+K +I+ SI R + T
Sbjct: 966 GKIFIKSKLDREDIEEYN----LKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTY--------------RFDTQVAQFIVDKQTGKITTSQV-----LDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATD-DDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVS-------PLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGK----------VRYKIVNGNTDGTFKINETTGVISTL-------RALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSR---NLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVS-------PD---TGKFSLDL-KTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFT-----RDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDT 1611 HSP 9 Score: 105.916 bits (263), Expect = 6.735e-23 Identity = 137/574 (23.87%), Postives = 236/574 (41.11%), Query Frame = 1
Query: 856 IDRETREKYSFTLVALDTEGK---RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTS-REIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSL-STKNERPKRGMVII------YQIETNENKSFDREKVD------FYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQ-ENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-----QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK 2499
+D E+ + + LVA +G G++ + +N+ D NDNSP + + E T + + F +K D + N K+ + I T GN + I + + A LV+ + D G +T+ + + + D NDN PL S I+E+ RT ++T + D D E ++ T + + V + S N + K I Y+I+ + R +D F + + +D+G P + +I+ E P F Y ++ EN++ + + +V D + +I Y+++ + YF I GVI + D E K + V A D+ PS+ + + V D ND KP+F + Q+ I G + V+ + A D+D NG VW+ I + + F + K G + +D E T ++ V A D G PP+ ++VT+ + DLND+ PVF P V + L +++A D+D N + F ++G I+K
Sbjct: 2025 LDYESTKNFRLHLVAT-PQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWT---GNEAGVFTIDSTTGEITTAKLLDRETTASFDLVI--RGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSE-VNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITRE----PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIEN--SNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGI--PVGTIVVN-----VSAADKDSGANGRVWFAIQS---------GDDKGSFAID-RKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPND---VQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDK 2565 HSP 10 Score: 100.523 bits (249), Expect = 3.251e-21 Identity = 182/759 (23.98%), Postives = 302/759 (39.79%), Query Frame = 1
Query: 322 LKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDRE------------ELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD---TEGKRGHVNIVLNI--KDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKI---DTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM------KLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVE-SYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAE-----KTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFT--------FPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
+ E PI S + + A K R+ I++GN ++N TG + + ++D E ++ +++ +V T + D ND PTF K I I E+VPI + A D DS Y I+ ++ FK +S E +IQ IDRE +YS + A D TE R + L I +D+NDN+P+++ +++ + ++ S+ A D D N ++++I DT K K G LK + + + + + D G L + + + D NDN P + + ENK T + +T D D N E + + + + S G+++ N DREK D Y + + P SS + V+D NDN P F + ++ ENS + I +++ D D N K+ YS+ GN F+I G + T K DRE K+ Y +V A D P ++ A+I + + DQND P+F++ Y I E + ++ N + A+D+D NG + Y + + V + D+ RF+ I ++E + IA+D G+ P + V + + D N+H P FT FP++++ + V ++ DA D D + NG V + L
Sbjct: 1233 VPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTD--GTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLV-----------TIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTID---------SQSPRAHFKINS----ETGLIQ----TTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGN--VEYRIVSPDTGKFSLDLKT---------------GVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHS----------GLIV-------TNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENS-PARLIYTLTVQDLDYGNNTKVLYSIMS-GNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILN----LTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSI-------------KQEYNFF---CIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVT---------MVTATDA-DTDKSTNGKVTYRL 1895 HSP 11 Score: 98.2117 bits (243), Expect = 1.883e-20 Identity = 176/737 (23.88%), Postives = 288/737 (39.08%), Query Frame = 1
Query: 307 LFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG-SFIFELTFL-----IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGK--RGHVNIVLNIKDINDNSPQWIGLPYKITVKECTT-SREIFSLKAFDADDQNNINSKLDFKIDTAKLG--NSRKXXXXXXXXXXXXXXXE------GALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLE--MNCEFSCHLNDT---TYLHLKEVMSRSLSTKN--ERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIF-TKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVI--FTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEF-NIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
LF + ENKP + ++ + A + A+ + I SG V + ++ +G + S +DRE+ D + + + G S+ F ++ ++D ND P F + L + E+ P + L V DLD YG N IM+ + F +L K+DRET+ Y ++ A D NI + I+D NDN P + Y T+ E T I +L A D D +N N DT + +SR I E +G +VP++ I I+D N++AP + T I N ++T++T D D + N + + L+D+ T L + E + S+ T P +G +Y II D GSP L +++ + D+ P F ++ I ENS S I +V A + +A++ YS+ G ++ GVI + + D E + ++A+ G S + + + V+D+ND P F + E G + + A D D NG V Y I + F + T G+++ ++DRE ++ + + D G PP S + V V + DLND+ P+F P S VNI + TG ++ + A D D
Sbjct: 1545 LFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSG-VEMDKF-SIDKHSGLIVTNSILDREK------KDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARLIYTLTV-QDLD---YG------NNTKVLYSIMSGNTDGAFTIGRSTG--------ELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVR--------------IKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALY---------------------IIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRA---RASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVK-VTATDVDSGTNGKVTYSIWT---------GNEAGVFTIDST-TGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFD-PLSE----VNIREDTRTGAVVTSVVATDTD 2201 HSP 12 Score: 97.8265 bits (242), Expect = 2.210e-20 Identity = 177/775 (22.84%), Postives = 314/775 (40.52%), Query Frame = 1
Query: 313 EIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVI-----ISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPI--GHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTT----------------SREIFSLK-------------AFDADDQNNINSK----------LDFKIDTAKLG--NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNC---EFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL---DEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENG-LVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIY---IDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVF 2454
+ + EN + S + ++A+ A +A+ + IISGN + R F TG + ++S D + K N H+V +S ++ L +ID ND P F + + ED + A+D+DS G +Y I T F S ++ K +DRET + + D+ K + + + + D+NDN P + L ++ ++E T SR ++LK A D D +N K +D+KID A G ++R+ + S I ++ +G+ + +V ++++ +T P + S K+ EN + ++LTV+ D S ++ ++ Y + + + G++ + NK D E + +++ ID +P + V D ND P+F +S Y + E + + +VSA DKDS N ++ +++ D+ G+ F+I+ GVI T+ D E ++ +V A+D G P + S+ ++VLD ND P+FR N V+ N+ +++ L I A D D N L + IG T + D +F +T N E + +Y + + A D G PPLS++IT+ V + D +++ P F + F ++ + G + ++ A D+D G V F
Sbjct: 1969 RVSIPENSKVGSYITTVRAR---ASSDAQVTYSIISGN-KGRAFYVDPF-TGVIS-VASADALDYESTK-NFRLHLVATPQGWVSLNGYMI-LDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSI---------WTGNEAGVFTIDSTTG--------EITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLS-EVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKID-ADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRII----------IT--------REPKFELPSYFGKVPENA--MMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQ-------------RSGVISV-------NKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGS--FAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGP-NDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLID-----KFSGWLTTNITFDY-------ENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSF---NRMDYKF-DVPGNAKIGDFVGQVTATDRDSGDQGRVFF 2657 HSP 13 Score: 54.6842 bits (130), Expect = 2.939e-7 Identity = 62/220 (28.18%), Postives = 94/220 (42.73%), Query Frame = 1
Query: 1828 GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYG---------VIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
GVI TK DRE+ S YN T++ + P +S T +LV V D ND P F + +V + L A D D N Y I S V N FK+ ++ LY +DRE + +++ A D G P + +++T+ D ND+KP F+ S SG+ I + G + ++ A DKD N + + +
Sbjct: 12 GVITTKTVLDREKVSAYNLTIV--EFSTPPKSYT--VLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQKL---IAVDSDFGSNSTQSYTI--VSGNVGN-------VFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFS-NVSYSGT---IPENIDVGTSILQVSASDKDIGTNAEIQYSI 211
BLAST of Protocadherin-1 vs. Ensembl Nematostella
Match: EDO35413 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLL0]) HSP 1 Score: 157.147 bits (396), Expect = 1.459e-38 Identity = 188/742 (25.34%), Postives = 317/742 (42.72%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG----SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRK-XXXXXXXXXXXXXXXEGALKGMAEM---KLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDE-DLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFE---TGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
+S F + + EN + +I + A P A AK + G+ N ++ +G ++ + DRE KD+ ++ G S + + D ND P F I ED +G I ASD D + +Y I + K+T M + ++ V +++DRE YS + A D T + I + + D ND+ P ++ + + E + EI +L+A D D + +N+++ + T NS S + + + E + E+ L VP K + T++T+ ++D NDN P+ +++ +A++ E I+T++ ED ++ + S TY + + L NE G + I DRE Y++ + D GSP L+S V VLD+ND++P+FT + ++ E++ + + VSA D D NA + YS I + I K ++YN TV A + P + A+I ++VLD ND P+F K Y V+ G+ ++G +EA D+ D N LV YE A S T RF+V + G++ + + + T YI V A D G+P +S++ V V + + N H PVF+ V +SE E G L + A D+D+ NG + ++++ S
Sbjct: 16 TSDEFTVSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGS--HGNKFAIDASSGRIYTTGTFDRE----TKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPEKAT------------------FSMNPVTGEITVGQRLDREG-ANYSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITLQAVDGD--SGVNAEIRYAFVTGNSNNSFTINSITGRLRTARNLDRETTPRFTLEVLAYDLGVPRK-------DSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEGVVESNIVTVVA---EDRDIGSDGS-----VTYC-ITQGREGGLFVINE--NTGTIGI-------TAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVIKVSAVDGDVGSNADVTYSTG-------MITLNRAIAFKPFSALPNPNIYNLTVRARNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGV---SIGRVEAVDKFDYGPNALVRYE--AIS-------GNGTGRFRVA-PETGEVLIASSLRDDVNKTYYIRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFS-------KAVYQTSENEDIAVGSALLTVTATDRDFGRNGEISYDIIAGNS 678 HSP 2 Score: 138.272 bits (347), Expect = 7.615e-33 Identity = 104/291 (35.74%), Postives = 149/291 (51.20%), Query Frame = 1
Query: 1630 SVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTI 2493
++ V D NDN+P+FT + I EN + + +V+A D D+ +NAK+ Y+ GN + G I+T FDRE K Y+ V ASD+G PS+SST +LV V D ND P F Y F+I E + AV ++G + A+D D+ EN + Y I SP EK +T G++++ +DR E + I V A D G PPLS S+ +TV ++D NDH+PVF S G+ V I G + L A D D +N + + V S + TI
Sbjct: 2 TITVQDVNDNAPVFTSDEFTVSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGSHGNKFAIDASSGRIYTTGTFDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAE---DAAVGASIGTVSASDADIGENARLTYSI--VSP-------EKATFSMNPVT--GEITVGQRLDR-EGANYSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFL---SHIGT-VFIDENASPGTEIITLQAVDGDSGVNAEIRYAFVTGNSNNSFTI 273 HSP 3 Score: 137.502 bits (345), Expect = 1.452e-32 Identity = 167/688 (24.27%), Postives = 290/688 (42.15%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFG----SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH--VNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDK-DSQENAKIKY---SLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFT 2334
+ ++ E+ + + + + A + A+ + I+S + +N VTG + + +DRE N + G S E+T ++ D ND P F + I E+ G I A D DS Y +T + F +SI +L+ + +DRET +++ ++A D R N+ + ++D+NDN P + Y V E I ++ A D D I S D + T + R+ + + I I L + K + ++ DGG L + D+ +++ D ND+AP+ + + + K++E+ + + ++ D D+ N D TY ++R+++ K + N N Y++ + + P + + VLD ND++P+F KS+Y ++++ IG V A DK D NA ++Y S + G + V+ D K+ Y V ASD G+P S TA + V+V ++N P+F K Y+ + E ++AV + L + A D D NG + Y+I A + F + +T NG L + +D E Q ++V A D GK P ++ TV +TL D+ND+ PVF+
Sbjct: 125 YVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPE---KATFSMNPVTGEITVGQRLDREGA-----NYSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRYAF---------VTGNSNNSFTINSITG--------RLRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEGVVESNIVTVVAEDRD----IGS--DGSV-TYCITQGREGGLFVINENTGTIGITAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVIKVSAVDGDVGSNA-------DVTYSTGMITLNRAIAFKP----------FSALPNPN---------IYNLTVRARNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIASSLRDDVNKTYY-IRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQTSENE---DIAVGSALLTVTATDRDFGRNGEISYDIIA---------GNSQEYFGIGLT-NGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFS 740 HSP 4 Score: 135.961 bits (341), Expect = 4.054e-32 Identity = 133/513 (25.93%), Postives = 225/513 (43.86%), Query Frame = 1
Query: 934 IVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS-LDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVF 2454
+ + ++D+NDN+P + + +++ E + ++ A D D +N K+ A G S + SS + G + + + D G +T + +++ D NDN+P I E+ + ++ D D+ N TY ++S +T + P G + + Q DRE + YS+ + D G+P L++S + +VIV D ND+ P+F I I EN+ +EI ++ A D DS NA+I+Y+ + N F+IN + G + T DRE + V+A D G P + S ++ V + D ND +P+F +Y + E V +N+ + A D D+ +G V Y I + F + G + + +DRE +S + V A D G P LS+ V V + D NDH PVFT P++ + V + + +G + K+ A D D N V +
Sbjct: 1 VTITVQDVNDNAPVFTSDEFTVSIAENVDDGTTVITVTATDPDAGDNA------KVSYATYGGSHGNKFAIDASSGRIYTT-GTFDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAEDAAVGASIGTVSASDADIGENARL-------TY----SIVSPEKATFSMNPVTGEITVGQ-------RLDREGAN-YSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRYAFVTGNSNNSFTINSITGRLRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEG----VVESNIVTVVAEDRDIGSDGSVTYCI---------TQGREGGLFVIN-ENTGTIGITAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFT-PATLT---VKVQEDTGSGTTVIKVSAVDGDVGSNADVTY 469 HSP 5 Score: 135.961 bits (341), Expect = 4.527e-32 Identity = 133/462 (28.79%), Postives = 204/462 (44.16%), Query Frame = 1
Query: 1261 LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYL---LAKLDAEDKDYALNGSVVFELV-GNESLSPVTIEKDGRVILKESIKSRSHRITQSDRIL-VRASDQCENCHQSEVGSLI 2628
+TI+++D NDNAP+ + + I EN + +T D D N + S Y + + IY T FDRE D YS+ + D G+P +S+ V V D NDNSP F Y F+I E++ + IG+VSA D D ENA++ YS+ FS+N + G I ++ DRE + Y+ V A+D G P S++ I V V D ND +P+F ++ N + + ++A D D N + Y +V F + + G+L +DRE ++V+A D G P + VTV L D+ND++PVFT A +E G + + + AED+D +GSV + + G E V E G + I ++ R T+S L V+A+D SE ++
Sbjct: 1 VTITVQDVNDNAPVFTSDEFTVSIAENVDDGTTVITVTATDPDAGDNAKVS-------YATYGGSHGNKFAIDASSGR-----IYTTGT-----FDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPEKATFSMNPVTGEITVGQRLDREGAN-YSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDE--NASPGTEIITLQAVDGDSGVNAEIRYA------FVT---GNSNNSFTIN-SITGRLRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYA--------AEVSEGVVESNIVTVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTI----GITAKLDRETKSKYTLRVQATDGGSPALSSEADVIV 420 HSP 6 Score: 90.8929 bits (224), Expect = 2.485e-18 Identity = 137/601 (22.80%), Postives = 237/601 (39.43%), Query Frame = 1
Query: 586 IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIF--SLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVV-------DGGGLQNTTD----LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHL----NDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKY--SLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKP 2325
+ + N P F+K + S ED+ +G + A+D D + G SY DI+ ++ F + + L V K +D E +E YS + A D E K + + + ++D+NDN+P + + Y+ + E TT R + S++A D D++ + + LG S K ++ + G ++ E V + +G Q T D + I I N+ P+ + +A + EN + ++ D+D + HL N + + S+S + + G+V + I N + + +P + V V D ND P F KS+Y + E S + +V+A D DS + I+Y S GN + + G + T + DRE + Y TV A+DNG P + A+++V + D ND P V N + + A D DL+ N P+ + F++ ++ +G +S +DRE+Q I + D LS + + D ND++P
Sbjct: 624 VTERNLHPPVFSKAVYQTSENEDIAVGSALLTVTATDRDFGRNGEISY---------DIIAGNSQEYFG--------IGLTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVRATDRDERGQQSVRYSI------LGGSGKDKFVIDERT-------GEIRATVEFDFEVTMSSFLMIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQSVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGSDNQQGFDLDSNTGTLSVSGDLDNERAGIVTLRVIAKN-----------------LFQNSVTPSSVAHATIVVTVTDAND-PPRFLKSVYSAHVTEGSRIGHVVTNVTAVDDDSDIRS-IRYGISAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPLPCIGRVTE--NKPQGTQVMTLNAEDPDLNPN---------RGPFKYSISGSDYGSFRLNVS-SGVVSTVKSLDREKQDAYNISIKVTDARG--LSAVNFCMIHVEDQNDNRP 1161 HSP 7 Score: 81.2629 bits (199), Expect = 2.379e-15 Identity = 106/418 (25.36%), Postives = 174/418 (41.63%), Query Frame = 1
Query: 1219 LKVVDGGGLQNTTDLT--ISIKDCNDNAPLISITSRSAKIKENK--RTLEILTI-LTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKG-SPQLTSSQQFSVIVLDENDNS--PIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL---DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIA----SDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKD 2427
+ DGG T+ T I+++D NDN P+ S ++ EN R++ + ++ T +DE + + +S ++ S K +R I +E FD E ++I D+G SPQ T+ SV +L N P+F +S++ + EN+ + VSA DKD + + Y L D N G + D E+ + VIA ++ PS + A+I+V V D ND + Y ++ E V N+ ++ +D D+ + Y I A T V G + +DRE + + V A D+G PP++ + T+ VTL+D+ND+ P T P G ++ G + L+AED D
Sbjct: 709 VSATDGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVRATDRDERGQQSVRYS-------------ILGGSGKDKFVIDERTGEIRATVE------FDFEVTMSSFLMIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQSVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGSDNQQGFDLDSNT-GTLSVSGDLDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTDANDPPRFLKSVYSAHVTEGSRIGHVVTNVTAVD-DDSDIRS---IRYGI----------SAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLT-PLPCIG---RVTENKPQGTQVMTLNAEDPD 1088 HSP 8 Score: 56.6102 bits (135), Expect = 7.531e-8 Identity = 69/290 (23.79%), Postives = 111/290 (38.28%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVA----SDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKEC-TTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHL 1422
+ + D ND P F K + E IGHV+ A SD+ S +YGI++ N F M + ++ ++DRE +Y T+ A D T G+ +V+ + DINDN P LP V E ++ +L A D D N + I + G+ R +S+ + E + + +KV D GL I ++D NDN P TSR + + + V+ +D +++ +C L
Sbjct: 943 IVVTVTDANDP-PRFLKSVYSAHVTEGSRIGHVVTNVTAVDDDSDIRSIRYGISAGNTGNAFV----------------------MDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPLPCIGRVTENKPQGTQVMTLNAEDPDLNPN-RGPFKYSISGSDYGSFRLNVSSGVVSTVKSLDRE------KQDAYNISIKVTDARGLSAVNFCMIHVEDQNDNRP--KATSRDVYVHTFEGKFLGGVVADVRPDDPDIDDLMTCAL 1200
BLAST of Protocadherin-1 vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 156.762 bits (395), Expect = 1.705e-38 Identity = 178/684 (26.02%), Postives = 298/684 (43.57%), Query Frame = 1
Query: 592 DMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKK--IDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKID-TAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDL---TISIKDCNDNAPLISIT------SRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL---DEIGNIYFSINMY-GVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
D+ND P F L I E + + + A+D D+ G Y I + +T + C S+ L VI K +DRET + Y + A D T G+ I + I D ND++P + Y ++ E T + L+ AD + N + + ID A NS ++ +K + + GG+ + DL TI++ D NDN+P + IT A EN + + V D+D N + + + +V + Y I+ K DRE V FY++ + DKG P ++ + V D NDNSP FT + Y I E + S + ++A D D +N + YS+ +++G +F ++ G++ T + DREQ S T+ A D+G ++ + ++ V ++D ND KP F K Y+ I E ++ + + A D D +NG + YEI ++ DA+ F++ T+ G L +DRE +S V+A+DHG P L +S+ V +T++D+ND+ PVF +P F +I G LL ++ A D D N + ++++G + +I+ VI ++ S H + + +++ A D
Sbjct: 87 DINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIAS-GDNTATFSLGTTACPTGST------------LCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAE-NTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNV-----IASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVE--------------FLGFYFIQL--QKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLG--WFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEG---ASIGATVLQVSATDVDSGDNGRITYEISSS-------DAQVNGLFELN-TQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVF-YPVEY---FASIMENEPPGKLL-QVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVI--STLASLDHEVEEFFSLIISAKD 715 HSP 2 Score: 146.362 bits (368), Expect = 2.748e-35 Identity = 175/673 (26.00%), Postives = 275/673 (40.86%), Query Frame = 1
Query: 586 IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQW--IGLPYKITVKECTTSREIFSLK---AFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALK----GMAEMKLVVP------------LKVVDGGGLQNTTD--LTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKY---SLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVI 2514
I+D ND P F + SI E+ G I A+D DS G Y I+ D + +SI DL+ ++ + +D E + Y+F ++A D K + +N+ D NDNSPQ LP K + + + D +N NS+ + KI EG K G ++L P L V D G +T + I + D NDN+P + + +A I E + + L D D N S + L +V +S G+V K DRE+V ++ I D GS T S +V ++D NDN P F KS Y+ I E + + + VSA D DS +N +I Y S D N F +N GV++TK + DRE KSLY+FTV+A D+G+P S+ + + + D ND P+F +Y +I+E+ L + A D D N ++ Y+I F + + G +S +D E + + + A+D G + + V VT+ + D+ PVF + + N+ G L+ ++ A KD NGS+ + +V + + ++ G +I
Sbjct: 196 ILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAID-------------WDAIQSNSIFDLDSS--TGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGD--------------------DEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQS----------GLVTTA-------KPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMEN----EPPGKLLQVTATDADEGTNAVISYDIIG---------GNNNGNFSID-SSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPK----GTLVGRVYATTKDK--NGSISYAIVSGDPTNLFLVDSTGGII 796 HSP 3 Score: 141.354 bits (355), Expect = 8.737e-34 Identity = 131/450 (29.11%), Postives = 199/450 (44.22%), Query Frame = 1
Query: 1267 ISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLD----EIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEAN-------DEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIE-KDGRVIL-----KESIKSRSHRITQSDR 2565
+ + D NDN P + +I+E+ I T D D N D T + SL T + +I + K DRE DFY + I D+G+P L ++ +LDEND++P+FT++ Y I EN+ I VSA D+DS N IKY++D + +I+ + GVI TK+ D E K+ Y F VIASD G PS++ A++ + VLD ND P + Y + G+ A+ + LI N D+D + N +I N D E FKV+ + L +DRE + + D G P S V + + D+ND+ P FT ++ NIS + G + +L+A D D NG+V + + G L ++ + G V +E + S + IT D
Sbjct: 83 VQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTV-----DYTIASGDNTATFSLGTTACPTGSTLCVITK------KPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITY---LPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKI-------TNGDDEGC--FKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFT----SNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDH 505 HSP 4 Score: 119.783 bits (299), Expect = 3.735e-27 Identity = 163/688 (23.69%), Postives = 290/688 (42.15%), Query Frame = 1
Query: 574 LTFLIIDM---NDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVV--DGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNEN-----KSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
L F++ID+ ND P F +I E G + A+D D G SY I D F D + ++ K +DRE + T+ A D + K G + + I D NDN P+++ YK T+ E + + + A D D +N ++ ++I ++ +++ + ++ + L E K + V+ D G L ++ + ++I D NDNAP+ A I EN+ ++L + T D D N V+S + N + I+++ S D E +F+S++I D G+ + +V VL++ DN P+F +Y F + EN + +G V A KD +N I Y++ + N++ + G+I DRE+K+ Y VIA S+ A++ ++VLD+ND P F IV+ G V + A D D +NGLV Y++ + +AE + +G + L + +++ + V+A D G PP +++T+ +TL+ +H P FT S + + ++ Y++A D+D NG + + + I G++ +++S+ + S ++VRA+D
Sbjct: 408 LGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITG-----------GNDLGWFQ--VDFQSGLV----TTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDN--GRITYEISSS---DAQVNGLFELNTQTGVLWTKSQLD--RETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLLQV-TATDADEGTNA----------------VISYDIIGGNNNGN------FSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKD--KNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSV--IVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTS--------NAEGLLWIN---STSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSI--NHPPKFTLSSYVTHVLASQPLSYQFFYVVAV----DQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLL---QALKGSYDLIVRATD 1024 HSP 5 Score: 119.398 bits (298), Expect = 5.564e-27 Identity = 178/746 (23.86%), Postives = 299/746 (40.08%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCS--HIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKR--GHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNI---------NSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEM--------KLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKEN--KRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSF-VNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNES 2475
EL +N S ++ L A P + I GN Q++F +G + +DRE++ + H GS +T IID ND P F K + +I E IG + A+D+DS G +Y+I S+D E+ L ++DRET+ YSFT++A D + V + L I DINDN+P + + Y ++ E ++ + A DAD+ N N+ +F ID++ G + +A + L++ K DGG T + +++ + DN P+ + + EN K TL T KD++ ++ ++ D T L L + G++ I N DRE+ Y + +I L++ ++ VLD NDN+P F+ S +I + + + +A D D+ +N ++Y L IN GVI K ++ Y V+ASD+G P + ST +I + L N Y +++ S + + A D+D +NG ++Y I P + F I GKL + + + + + + V A D G P S S+ VT+ + D NDH+ +F + +F ++ G L+ L A D++ +V+ L+ +ES
Sbjct: 436 ELAQNG---SYVLQLNATDPDEGDNGTVSYSITGGNDL--GWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVT--IIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEI----SSSDAQVNGL-----------FELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSST----------------------GVISTLASLDHEVEEFFSLIISAK--DGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSIS--YAIVSGDPTNLFLVDSTG------------GIIKI-------NGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHI-TLSINHPPKFTLSSYVTHVLAS---QPLSYQFFYVVAVDQDSGKNGQLFYSI---------PQGNEEGLFG--IFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLF-----VNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSES 1094 HSP 6 Score: 117.087 bits (292), Expect = 2.603e-26 Identity = 109/408 (26.72%), Postives = 186/408 (45.59%), Query Frame = 1
Query: 1267 ISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI--YFSI-NMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREE----QSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVF-TFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELV 2463
+++ D NDNAP+ S + + E + + D D N +F L T + K ++ S E + +K+ DRE Y++++ D + L S+ + + V D ND P+F +S Y I E+++ S + +++A DKD +N IKYS+ GN+ F + + G + + D E LY T+ A D+G SST ++ V VLD ND P+F Q + E N+ +G A+D D N + + + + +P +K F V + +++ ID E + + + V+A D G P LS ++TV + D ND+ P F + P++A+GS +N+ + + AED D NG V + ++
Sbjct: 1147 VTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMD-KFFINSSTG----------------ELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISN-GNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRE---NVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTP---------SKTFSVN-SATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLNVMT----------ITAEDPDRNSNGKVTYSII 1513 HSP 7 Score: 107.842 bits (268), Expect = 1.535e-23 Identity = 126/525 (24.00%), Postives = 208/525 (39.62%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVAL--------DTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECT-TSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL-DEIGNIYFSINMYGV-IFTKEKFDREQ----KSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI 2103
+T I D ND F ++ E+ G ++ VA LD + Y + SS + + Q+ ++DRE K + + V + DT KR +++ + D+NDN+P + Y ITV E + +F +KA DAD+ + N+K + + + G I + + + + LVV L +T + I++ D ND P+ + + I E+ ++ L D+D+ N +++ + +V S + G +I+ KS D E Y + I D G L+S+ +V VLD NDN+P+F + EN +G +A D+D+ NA I +S+ + + FS+N I T D E + + V+A+D G P S+ SI V+V D+ND P F + N+ I A D D + NG V Y I
Sbjct: 1036 VTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSL-------------------ISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGD--NAKFFYSLVS---GTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESAT----------GRLIVA-------KSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGF-------VSPPAAAAGSSLNVMTITAEDPDRNSNGKVTYSI 1512 HSP 8 Score: 102.449 bits (254), Expect = 7.055e-22 Identity = 145/570 (25.44%), Postives = 237/570 (41.58%), Query Frame = 1
Query: 298 SSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQ----KDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEG---KRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXX-XXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAP-LISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMV-IIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL--DEIGNIYFSINMYGVIFTKEKFDRE-QKSLYNFTVIASDNGEPS-RSSTASILVKVLDQN 1962
S +++ I + E S + +KA AK + ++SG + I N TG LHL ++DRE K D S+ + S ++ + D ND+ P F + + ++I ED IG ++ ASD D + G+ Y I N +++ D+E +L V K +D ET + Y T+ A D G VN+ +N+ D+NDN+P + P +TV+E T + A D D N+ + F + + + ++ I++ I +E G +LVV L +T+ + D NDN+P +S + +A +L ++TI T +D D N + TY ++S + N P G + +I+QI N Y + I D G P + SV P F+ + Y+ + EN V + + +V A S N I+Y L D + + GV+ T DRE + +N V A D PS R+S+A++ + V D N
Sbjct: 1160 SRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFI--NSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTA----KIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISN---------------GNLAAMFDVESA--TGRLIVAKSLDFETTQLYELTITAQD-HGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRD--TGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAA-----GSSLNVMTI-TAEDPDRNSNGKV-------TY----SIISGNNGYFNLHPSTGQLQMIHQIPDNPT---------IYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 9 Score: 91.6633 bits (226), Expect = 1.421e-18 Identity = 88/339 (25.96%), Postives = 151/339 (44.54%), Query Frame = 1
Query: 1567 YSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMY-GVIFTKEKFDREQ--------------KSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVE-SYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIE-KDGRVILKESI 2529
Y +++ D G P ++S ++ + D ND+ +F + + F + ENS + +G++ A D I YSL +F++++ G I T+ + DRE+ +++YN T I D A ++V V D ND P+F R Y + E S V I+A D D +N +Y + + +F + + G+L L +DRE S+ + V A D L ++ + +T+ D ND +PVF S VNI+ + G L+ L+A DKD NG + + + + +E GR+I+ +S+
Sbjct: 1016 YDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLIS-SESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDK--------AIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFR----IKAMDADEGDNAKFFYSLVS---------GTGMDKFFIN-SSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVF----PESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSL 1327 HSP 10 Score: 88.1965 bits (217), Expect = 1.505e-17 Identity = 139/635 (21.89%), Postives = 250/635 (39.37%), Query Frame = 1
Query: 490 VDREELCQQKDNDCSHIVIISFGSFIFELTF---------LIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH--VNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDAD-DQN----------NINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSS-EIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIY-IDVIARD-HGKPPLSNSITVTVTLNDLN 2313
+DREEL + N S++ I+ + + T + D+ND P F++ +++ E + LP G ++I+ + F + + + +L + K +DRET Y+ + A D + I + + D ND P + Y + + E + +L A D D QN N+ + D + T +L ++ L L A+ ++PL +T ++T+++ D NDNAPL + ++EN T + T D D N + + + S++ S + + + +ET D + ++++ D+GSP+L++ + +V V DENDNSP F + GSS + +++A D D N K+ YS+ N YF+++ + ++Y T+ ASD G+PSR + + V P F Y+ ++ E N ++ + A NG + Y + + D+ K F+V + G + IDRE + + V A D G ++S TVT+T+ D+N
Sbjct: 1111 LDREELIK---NTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSE-------LSLP----------GSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYE--------LTITAQDHGLIPLS--------STVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSM-------YSQTPSKTFSVNSATCEITTIAAIDLETMPAGR------DSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSP------PAAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTE---NKVAGTSVVTVLAAYPQSSLNGNIEYYLTS--------DSSK-GGFEV-VKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677
BLAST of Protocadherin-1 vs. Ensembl Nematostella
Match: EDO34815 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN97]) HSP 1 Score: 153.295 bits (386), Expect = 6.505e-38 Identity = 157/600 (26.17%), Postives = 253/600 (42.17%), Query Frame = 1
Query: 565 IFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTE--GKRGHVNIVLNIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVL-----IICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI--GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPV 2328
+ E+ ++D ND P F I+ +I E IG + A+D DS G + I + S E+ ++V +DRE + Y + A+D + G+ + + ++D+NDN+P++ + + V E I + A D D +N A + S S+ + I L + + DGGGL++ + + I D NDN+P + + I+ + +D D+ N + + L L ++ P G + N + DRE+ Y+++ + D G Q TS ++ V D NDN P F +S Y ++EN +++ V+A D+DS N++I YSL G+ FSI G I ++ +RE K Y+ T+ ASD G P SS A + V VLD ND P+F + YE + E GN A + + A D D++ NG V Y I GA + N E T + Q GV++RE + + V+ARD G P + T+ V + D ND+ P+
Sbjct: 317 LAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINS------------------GSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSN-----------AAITYSMSYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAI-----LILPFIIV---------PDTGNI-------NTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTG-GDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSE--GNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTIN---ETTGVIRTQ----------GVLNRESKDFYTLIVMARDQGAVPYMDFGTIDVHVIDKNDNTPI 850 HSP 2 Score: 148.288 bits (373), Expect = 2.965e-36 Identity = 181/781 (23.18%), Postives = 340/781 (43.53%), Query Frame = 1
Query: 328 ENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVR--LRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISF-GSFIFELTFL------IIDMNDEVPTFAKQEIELSILEDVPIGHVIDLP---VASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGH---VNIVLNIKDINDNSPQWIGLPYKITVKECTT-SREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFT-----VIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI-GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSE--FETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQ 2589
EN P+ + L+++ A + + A + + +G+ R + +++ G++ + ++DRE ND ++ I + G T + I+D ND VP F+ SI E+ G + + +A+D D + Y++ D +F+ + +I ++ +D E Y+F ++A D G GH +V+++ D NDN+P++I + T+ E + + + + A D D + +N ++ F I++ G + S+ ++ + G+L A+ V+ + +DG + +T++++D NDN P + + + + E ++ T D D N + ++ + + S + S RP DRE YS + D G L S+ +V + DENDNSP F Y+ ++++ + + + +V+A D+D N + Y++ + + + G I T K DREQ+SLY + +D+G +S A + + V D ND +P F + +Y ++E NM V + ++ A DED N + Y + G + P G++ L I+RE + ++ + A D G P LS+ V V + D+ND+ PVFT S + SE G + +++A D D NG V + ++ + +L TI + VI + + +R + + ++V A DQ
Sbjct: 125 ENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSN-HGTIEVAGNLDREV------NDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNG------------SDSIQFA--VNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGT-GHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPD--SGLNGRIFFSINSGSEG------KFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGF----AINSNTGSVTITRP-----------------LDRETKQAYSFTVHARDGGG--LESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILIL--PFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLE---NMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGVFSIEP-------------STGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFT-----SRVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIM-HGALGMFTINETTGVIRTQGVLNRESKDFYT--LIVMARDQ 826 HSP 3 Score: 122.865 bits (307), Expect = 2.382e-28 Identity = 170/708 (24.01%), Postives = 292/708 (41.24%), Query Frame = 1
Query: 571 ELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVL-NIKDINDNSPQWIGLPYKITVKECTTS----REIFSLKAFDADDQNNINSKLDFK-IDTAKLG-NSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRK-QYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIY------IDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNE---SLSPVTIEKDGRVILKESIKSRSHR-----ITQSDR-ILVRASDQCENCHQSEV 2616
++ ++ D+ND P F ++ E+ P+G + A+D DS + +Y + + F K S+ +E V +DRE + Y+ T+ A D R + I L I D NDN P++ Y +++E + + S+ A D D ++N + + D+ + N R +S + E V G G ++ ++ I + D NDN P +S + I E + + +T D D +N +N + + + RS G+V + + S DRE Y + + ID +V + D NDN+P FTK + ++ E S I + +A D D NA I YS+ G F+IN G + DRE K Y+FTV A D G S ++ V++ D+ND P F QY+ ++++ V + + A D D+ NG V Y I P++ PD G ++ +DRE+QS +Y +++ DHG ++ + +++ D ND++P F ++ N+ G + + A D+D +N +++ L G + S+ P T G++ L+++I + IT SDR V +SD + H +V
Sbjct: 99 RVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSV-----TAGDSHGLFRAVTKVSNHGTIE---------VAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQFAVNPRTGVITTRVSPPPSLDHERTTN----YTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFE--IGRS---------DGVVRV-------SGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPG---FAINSNTGSVTITRPLDRETKQAYSFTVHARDGG--GLESNVAVNVEIGDENDNSPQFPTVQYQTDVID---RTPVGTIVLAVNAEDRDVGNNGHVTYAI-LILPFIIVPDT-------------GNINTSSKLDREQQS-LYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENM----PVGTKVTMVTARDEDSGINSQIMYSLTGGDGVFSIEPST----GQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDV 739 HSP 4 Score: 120.553 bits (301), Expect = 1.287e-27 Identity = 118/399 (29.57%), Postives = 178/399 (44.61%), Query Frame = 1
Query: 1297 PLISITSRSAKIKENKRTLEILTILTVK--DEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSL---DEIG--NIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEP-SRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSP--YVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFEL 2460
P+ + S +A E T +L I TVK D D N + + D RS S P GM I+T N +R++ Y++ I D G P +++ + S++V D NDN+P+F + Y + ENS + + V+A D DS +NA + YS+ D G ++ +G I DRE YN T+ A+D G P SR++ A LV++LD+ND P F +Y +I E+ G I A D D++ N V Y + + + NP R V T ++S +D E + VIA D + V + + D ND+ P F PSS + IS G +A++ A D D LNG + F +
Sbjct: 1 PVFTPASYNATFTEGSSTRGVL-IATVKATDSDDGANGDVDYSIVDGNVGD-----PRSNSDFTLDPNTGM-----IKTARN--LERQQTFSYNLTIGAADHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGTIEVAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQFAVNP------RTGVITT---RVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRF-IPSSIQST---ISEAASIGQSVARVTANDPDSGLNGRIFFSI 373
BLAST of Protocadherin-1 vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 209.149 bits (531), Expect = 1.700e-54 Identity = 213/795 (26.79%), Postives = 353/795 (44.40%), Query Frame = 1
Query: 319 ELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLIS-SVDREEL--CQQ--KDNDC---------SHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVL---NIKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAE------MKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI-YFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKD-GRVILKESIKSRSHRITQSDRILVRASDQ 2589
+L E +P ++ + +L A L ++ H + + G+ LR ++ TG ++ +DRE L C+ +D+ C + I G + E ++D+ND P F+ + LSI E+ G + +PVA D DS G+A Y + + + F +D++ KI PQ+ VI +DRE ++ Y + +D GK + L + D NDN+P++ Y+ + E + ++A DAD N +D+ + A R L +KG+ + +K V + + +TISIKD NDNAP I I A I E+ + ++ V D D N +C + L+ + N+R ++ Y ++T D E++ Y + I+ +D G+P L+S+ V V D NDN+P F+ ++ E E++ ++ V A D DS NA++ YS+ E F IN G I + + DRE Y F V A+D G PS++ TA +++ V D+ND P F Y F++ E NM N +G++ +D D EN V + PD K I +NG ++ I DRE++ST + A D G PP S+ + VT+ + D ND+ P T P+++S + + SS +T + K AED D +N + + + G I + G + L + + + R++VR SD+
Sbjct: 44 KLSEEQPPNTLIGSLAADL--GLPDSGHLYKLEVGSPYLR----VDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGSNGVAEYALSAGPDANQL--------FGLQVAEDVDEKI--PQVIVIGNLDREKKDSYDLNIRVVDG-GKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDAD--TGANGDIDYSLHQASDTVQRLLRIDRSTGIIY-------VKGLVDREEDNLLKFYVVARDRGPNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPAS----ESANDRKRK-----YFLQT--TTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNE---NMPPLNPVGVVTVSDADKGENSQVTLFV--------EPDNGKF------IIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVK--AEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGL---HRLVVRVSDK 779 HSP 2 Score: 128.257 bits (321), Expect = 2.142e-29 Identity = 154/640 (24.06%), Postives = 256/640 (40.00%), Query Frame = 1
Query: 478 LISSVDREELCQQKDNDCSHIVIISFG------SFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTE--RFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLP----YKITVKE-CTTSREIFSLKAFDADDQNN------INSKLDFKIDTA-KLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMK-LVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKN-GKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
+I ++DRE +KD+ +I ++ G S + +T + D ND P F K + E + E+ P GH + A+D D+ G Y + +++D + R + +K L +DRE F +VA D K + ++IKD NDN+P + IGL + + E + ++ D D+ N + + F++ A + N RK L + L +K + + VD G L +T L + + D NDN P S E+ + + + + D D +N E + +++ L E+ S + E DRE V+ Y + DKG P T + + V D NDN P F S Y F + EN + +G V+ D D EN+++ ++ + N G I + FDRE++S Y F + A D G+P RSS + + VLD+ND P K + + + +++A D D N ++Y I +P+ QI+ N G++ L + + + V D GKPP + V V +N+
Sbjct: 217 VIGNLDRE----KKDSYDLNIRVVDGGKPPRASSALLRIT--VTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLH---QASDTVQRLLRIDRSTGIIYVKGL--------------VDREEDNLLKFYVVARDRGPNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTT---------TLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTG-----------------EIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDNGKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPH-----------GLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVNE 796
BLAST of Protocadherin-1 vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 207.994 bits (528), Expect = 1.882e-54 Identity = 199/697 (28.55%), Postives = 321/697 (46.05%), Query Frame = 1
Query: 565 IFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNI--KDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNT--TDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIY----FSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFR-KQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVI--DREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEK-DGRVILKESIKSRSHRITQSDRILVRASDQ 2589
+ E + D+ND P F + +S+ E+ +G + +P+A+D DS++ G+A Y + D T F D K+ PQL V+ +DRE ++ Y T+ A+D + + +L + D NDNSP++ Y+ V E + +KA D+D N ++++ + A + + +I ++G L L + D G + T +TI + D NDNAP + I A I E+ + ++ V D+D N +C + L+ S ST + + K Y ++T D E+V Y V I+ +D G+P L+S+ V V D NDNSP+F+ +I+E + E + I V+A D DS NA++ Y++ +G+ Y F I+ G + + DRE K Y F V A+D G P TA++++KVLD ND P F Y F+++E NM + +G++ D D EN V + PD K F VQ NG ++ I DRE++S+ + A D G+PP S+ + VT+ + D ND+ PV T PS++ SF +S + ++AED D N +VF + G I G + L + + +R H R++VR SD+
Sbjct: 115 LIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALT---AGPDAAT-----LFGLQVADDRGGKL--PQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSD--MGPNGEIEYSLHQAV---DPVPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPA---SDSTSDNKRK------YFLQTT--TPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNI--VGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLE---NMPPLSPVGMVTVLDMDKGENAHVHLSV--------EPDGGK---FVVQ---NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNS--SFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEM-TRKHGGLH--RLVVRVSDR 761 HSP 2 Score: 146.362 bits (368), Expect = 4.910e-35 Identity = 153/604 (25.33%), Postives = 244/604 (40.40%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPYKITVKE--------CTTSREIFSLKAFDADDQNN------INSKLDFKIDTAK---LGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGG--GLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLH-LKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L ++ D ND P F E + E+ P+GH + A D D G Y + + + K I D II V +DRE SF +VA D + K + + + D NDN+P + IGL +T E + ++ D D+ N + + F++ A N RK + + E ++ +A VD G L +T L + + D NDN+P+ S T E + E + +T D D N E ++ +Y+ L E+ + K P DRE + Y + DKGSP + + VLD NDN P F S Y F ++EN S +G V+ D D ENA + S++ G + N G I + FDRE++S Y F + A D GEP RSS + + VLD+ND P+ K + + + +++ ++EA D D N + + I +PY + F++ + +G+++L + R+ + V D GKPP + V + +N+
Sbjct: 230 LRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLH----------QAVDPVPKLLRI-DRTTGIIY----VKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGL---VTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVA----------VDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTP-----------------LDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPY---------QLFRISPS-SGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNE 778 HSP 3 Score: 102.449 bits (254), Expect = 1.461e-21 Identity = 139/575 (24.17%), Postives = 239/575 (41.57%), Query Frame = 1
Query: 310 FEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVII--------SFGSFIFELTFLIIDMNDEVPTFAKQEIEL--------SILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDT--EGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSRE-IFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGL--QNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETN--ENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGS--SEIGSVSAPDKDSQENAKIKYSLDEIGNIY--FSIN-MYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKV 1950
+E E+ EN P+ ++ +KA + + + + L++++ TG +++ +DREE+ N S V+ S +F+ T + D ND P + I L +I ED+P+G + L SD D + + + + + D+ F+ S D + K L+ +D E ++Y +VA+D+ ++ + + D+NDNSP + +++ E E I + A DAD + N++L + I +G+S + + L + + + D G + T + I + DCNDN P ++ S + EN L + ++TV D D N ++HL + P G ++ + SFDREK Y+ + +D G P +S ++ VLDENDN P+ TK + V S S + V A D DS NA + +S+ GN Y F I+ G I ++ R+ L+ V SD G+P R +TA + + V
Sbjct: 249 YEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREEI-----NSLSFYVVARDKGPQPKSSKTFV---TIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVV-----AGDVP---FQLRPASDSTSDNKRKYF---LQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDAD--SGTNAELFYNI----VGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENA----------HVHL-----------SVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSI-AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYV 776 HSP 4 Score: 100.138 bits (248), Expect = 9.124e-21 Identity = 87/308 (28.25%), Postives = 138/308 (44.81%), Query Frame = 1
Query: 1600 SPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEK------------FDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIF-RKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEI-GATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPS----SASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGN 2469
SP+L + + V D NDN+P F S+ + EN++ + A D+DS+ N Y+L + + ++G+ ++ DRE K Y+ T+ A D G P R S A + V V D ND P F YE + E N V +++ ++A+D D+ NG + Y + A P K ++ T G + + G +DREE +++ V+ARD G P S+ VT+ + D ND+ P + S NIS + G +A + DKD N V + G+
Sbjct: 112 SPRLIEGR---IEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPD---AATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSE---NSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPV--------PKLLRIDRT-TGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGD 401
BLAST of Protocadherin-1 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 208.764 bits (530), Expect = 2.112e-54 Identity = 224/837 (26.76%), Postives = 381/837 (45.52%), Query Frame = 1
Query: 259 CLNFHFSISKL---DKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHL-ISSVDREEL--CQQ--KDNDC----SHIVIISFGSFI--FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI-----ENYFKSTDIMT-----ERFEDCFKFSSIKDLEMKII-----QPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLN--IKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVI-LKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYY 2640
CL + I +L + + L E P + N+ A L + F + SG+ +++ +TG L +DRE+L CQ +N+C VI S++ FE +I+D+ND P+F + LS+ E+ PIG + LP A+D D + GI Y++ EN +S RF++ SS+ +L++ QPQL + +DRE R+ Y TL D +L I D+NDN+P++ Y+ + E + I LKA DAD +N ++++ + A + R+L R+ + +L + +++++ V + + + ++IKD NDN P I I A + E+ + ++ V D D N +C + LK + + E+ K+ + + + D E Y+V+I+ +D GSP LTS+ V V D NDN PIF+K++ + EN+ + +V+A D DS +NA+I YSLD N FSI+ G I DREQK Y F VIA D G + +A+++V V D+ND +P F + + F + E N+ ++ +G++ D D +N E+G E+ + + G + DRE+++T V A D G PP S + TV++ + D ND+ P TFP ++S + + SS T ++ + A D D +N + + ++G I+ VI L ++ + + + R++V+ +D N S+ + ++ Y
Sbjct: 10 CLYYCMLILQLAHQPAAKQVLRYRLAEEGPADVRVGNVAADLGMVAGSREVTFTLESGS----EFFKIDNITGELTTNEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADAD--VGVNGQIEY-VFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKP----ASEMEGEQNKKKYFL------HTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKE---NLDPNSPVGMVTVIDADKGQNA----EMGLFI--------EEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRT--VVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKHYGL---HRLVVQVTD---NGQPSQSTTTLVHVY 806 HSP 2 Score: 130.568 bits (327), Expect = 3.903e-30 Identity = 160/606 (26.40%), Postives = 253/606 (41.75%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPY-----KITVKECTTSREIFSLKAFDADDQNN------INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNE-----NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYG----NMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L +I D+ND P F K E + E+ G I A+D D G +IE F + R L + L V+ +IDRE + FT++A D K +VLNIKD NDN P + IG + ++ I ++ D D N + + F++ A + + ++ ++ + E E +V+ VD G L + L + + D NDN P+ S EN E +T +T D D N E S L+ S+ N I+ I+++ N + DRE+ + Y +I DKG L S V+V D+NDN P F + ++ F + EN +S +G V+ D D +NA++ ++E I+ N G IF+ FDREQK+ Y F V A D G+P RS+TA++ + V+D+ND P F I SY + V + + A D D N + Y I +P+ + F++ G +SL ++++ + V D+G+P S + V V +N+
Sbjct: 262 LRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVGVNG----QIEYVFGAATESVRRL-----------LRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETT----QEYNVVI--VAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLD---------------SSVNG--------IFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV----TFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPF---------RLFEID-GATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHVYVNE 809
BLAST of Protocadherin-1 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 209.149 bits (531), Expect = 2.180e-54 Identity = 214/779 (27.47%), Postives = 357/779 (45.83%), Query Frame = 1
Query: 259 CLNFHFSISKL---DKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHL-ISSVDREEL--CQQ--KDNDC----SHIVIISFGSFI--FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI-----ENYFKSTDIMT-----ERFEDCFKFSSIKDLEMKII-----QPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLN--IKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGN 2469
CL + I +L + + L E P + N+ A L + F + SG+ +++ +TG L +DRE+L CQ +N+C VI S++ FE +I+D+ND P+F + LS+ E+ PIG + LP A+D D + GI Y++ EN +S RF++ SS+ +L++ QPQL + +DRE R+ Y TL D +L I D+NDN+P++ Y+ + E + I LKA DAD +N ++++ + A + R+L R+ + +L + +++++ V + + + ++IKD NDN P I I A + E+ + ++ V D D N +C + LK + + E+ K+ + + + D E Y+V+I+ +D GSP LTS+ V V D NDN PIF+K++ + EN+ + +V+A D DS +NA+I YSLD N FSI+ G I DREQK Y F VIA D G + +A+++V V D+ND +P F + + F + E N+ ++ +G++ D D +N E+G E+ + + G + DRE+++T V A D G PP S + TV++ + D ND+ P TFP ++S + + SS T ++ + A D D +N + + ++G
Sbjct: 14 CLYYCMLILQLAHQPAAKQVLRYRLAEEGPADVRVGNVAADLGMVAGSREVTFTLESGS----EFFKIDNITGELTTNEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADAD--VGVNGQIEY-VFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKP----ASEMEGEQNKKKYFL------HTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKE---NLDPNSPVGMVTVIDADKGQNA----EMGLF--------IEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRT--VVRTVIATDTDTGINADLNYSIIGG 758 HSP 2 Score: 130.954 bits (328), Expect = 3.464e-30 Identity = 160/606 (26.40%), Postives = 253/606 (41.75%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPY-----KITVKECTTSREIFSLKAFDADDQNN------INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNE-----NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESY----GNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L +I D+ND P F K E + E+ G I A+D D G +IE F + R L + L V+ +IDRE + FT++A D K +VLNIKD NDN P + IG + ++ I ++ D D N + + F++ A + + ++ ++ + E E +V+ VD G L + L + + D NDN P+ S EN E +T +T D D N E S L+ S+ N I+ I+++ N + DRE+ + Y +I DKG L S V+V D+NDN P F + ++ F + EN +S +G V+ D D +NA++ ++E I+ N G IF+ FDREQK+ Y F V A D G+P RS+TA++ + V+D+ND P F I SY + V + + A D D N + Y I +P+ + F++ G +SL ++++ + V D+G+P S + V V +N+
Sbjct: 266 LRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVGVNG----QIEYVFGAATESVRRL-----------LRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETT----QEYNVVI--VAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLD---------------SSVNG--------IFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV----TFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPF---------RLFEID-GATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHVYVNE 813
BLAST of Protocadherin-1 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 209.149 bits (531), Expect = 2.219e-54 Identity = 214/779 (27.47%), Postives = 357/779 (45.83%), Query Frame = 1
Query: 259 CLNFHFSISKL---DKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHL-ISSVDREEL--CQQ--KDNDC----SHIVIISFGSFI--FELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI-----ENYFKSTDIMT-----ERFEDCFKFSSIKDLEMKII-----QPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLN--IKDINDNSPQWIGLPYKITVKE-CTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRS--------AKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINM-YGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQ-YEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGN 2469
CL + I +L + + L E P + N+ A L + F + SG+ +++ +TG L +DRE+L CQ +N+C VI S++ FE +I+D+ND P+F + LS+ E+ PIG + LP A+D D + GI Y++ EN +S RF++ SS+ +L++ QPQL + +DRE R+ Y TL D +L I D+NDN+P++ Y+ + E + I LKA DAD +N ++++ + A + R+L R+ + +L + +++++ V + + + ++IKD NDN P I I A + E+ + ++ V D D N +C + LK + + E+ K+ + + + D E Y+V+I+ +D GSP LTS+ V V D NDN PIF+K++ + EN+ + +V+A D DS +NA+I YSLD N FSI+ G I DREQK Y F VIA D G + +A+++V V D+ND +P F + + F + E N+ ++ +G++ D D +N E+G E+ + + G + DRE+++T V A D G PP S + TV++ + D ND+ P TFP ++S + + SS T ++ + A D D +N + + ++G
Sbjct: 10 CLYYCMLILQLAHQPAAKQVLRYRLAEEGPADVRVGNVAADLGMVAGSREVTFTLESGS----EFFKIDNITGELTTNEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADAD--VGVNGQIEY-VFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKP----ASEMEGEQNKKKYFL------HTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKE---NLDPNSPVGMVTVIDADKGQNA----EMGLF--------IEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLLPPSSTVRT--VVRTVIATDTDTGINADLNYSIIGG 754 HSP 2 Score: 130.568 bits (327), Expect = 3.859e-30 Identity = 160/606 (26.40%), Postives = 253/606 (41.75%), Query Frame = 1
Query: 574 LTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALD--TEGKRGHVNIVLNIKDINDNSP----QWIGLPY-----KITVKECTTSREIFSLKAFDADDQNN------INSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGG--LQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNE-----NKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESY----GNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLND 2307
L +I D+ND P F K E + E+ G I A+D D G +IE F + R L + L V+ +IDRE + FT++A D K +VLNIKD NDN P + IG + ++ I ++ D D N + + F++ A + + ++ ++ + E E +V+ VD G L + L + + D NDN P+ S EN E +T +T D D N E S L+ S+ N I+ I+++ N + DRE+ + Y +I DKG L S V+V D+NDN P F + ++ F + EN +S +G V+ D D +NA++ ++E I+ N G IF+ FDREQK+ Y F V A D G+P RS+TA++ + V+D+ND P F I SY + V + + A D D N + Y I +P+ + F++ G +SL ++++ + V D+G+P S + V V +N+
Sbjct: 262 LRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVGVNG----QIEYVFGAATESVRRL-----------LRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETT----QEYNVVI--VAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLD---------------SSVNG--------IFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV----TFPINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPF---------RLFEID-GATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHVYVNE 809
BLAST of Protocadherin-1 vs. Planmine SMEST
Match: SMESG000005378.1 (SMESG000005378.1) HSP 1 Score: 2032.3 bits (5264), Expect = 0.000e+0 Identity = 1073/1074 (99.91%), Postives = 1073/1074 (99.91%), Query Frame = 1
Query: 256 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNGDSKASKKSPDKNFNEDYKSKSYNSNYIIILYCXXXXXXXXXXXXXXXXXYFYSAGRNLNGLLERKPESKQNDCNIYSSNNQYFESIPFETTGQNEACNYPNGMESQTVYRMQNPDNNYMQLMTNTATSRCQTYTPINLYSSNLTKLPSNTLTYLNTHPINSFESPSQFSYDFNTSHLNSPNSVLPLINDENHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRASKPLVDNKYQLSKDVSLNQTKLNEKYISSSFV 3477
VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKLSRILYISSNNLILIEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNGDSKASKKSPDKNFNEDYKSKSYNSNYIIILYCLAAVVFIIFLIVLCVLIYFYSAGRNLNGLLERKPESKQNDCNIYSSNNQYFESIPFETTGQNEACNYPNGMESQTVYRMQNPDNNYMQLMTNTATSRCQTYTPINLYSSNLTKLPSNTLTYLNTHPINSFESPSQFSYDFNTSHLNSPNSVLPLINDENHENSGKIKSKSK ISSILKPNSKSSNIKSHSLSSIDSNSLDRASKPLVDNKYQLSKDVSLNQTKLNEKYISSSFV
Sbjct: 6 VCLNFHFSISKLDKSSSLFEIELKENKPIHSELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKLSRILYISSNNLILIEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNGDSKASKKSPDKNFNEDYKSKSYNSNYIIILYCLAAVVFIIFLIVLCVLIYFYSAGRNLNGLLERKPESKQNDCNIYSSNNQYFESIPFETTGQNEACNYPNGMESQTVYRMQNPDNNYMQLMTNTATSRCQTYTPINLYSSNLTKLPSNTLTYLNTHPINSFESPSQFSYDFNTSHLNSPNSVLPLINDENHENSGKIKSKSKHISSILKPNSKSSNIKSHSLSSIDSNSLDRASKPLVDNKYQLSKDVSLNQTKLNEKYISSSFV 1079
BLAST of Protocadherin-1 vs. Planmine SMEST
Match: SMESG000007877.1 (SMESG000007877.1) HSP 1 Score: 454.521 bits (1168), Expect = 3.026e-140 Identity = 290/776 (37.37%), Postives = 435/776 (56.06%), Query Frame = 1
Query: 310 FEIELK--ENKPIHSELINLK-----AKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSS-IKDL-EMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKL----VVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS-LDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLS---PVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
F I+LK ENK +LINLK KLP + + IIS + N L +G L +++DRE +C+ D C I++IS + E+ I D ND +P F+ + LSI E+ IG + LP A DLDS+ I Y I++ +F+ F+ IK + MKI P LK+IK+IDRE +++ L+A D+ ++G I ++I D+NDNSPQW + TVKEC + L+AFD DD + N ++ +KI NS K I + + + +G+ M L + VDGGG +N+T +TI I+DCND+AP I+I +A I+EN RT +LT + V D+D +N +F+C LNDTTY + V + N R + +Y I+ + FDRE + FYSVLI CID G P L + F+V ++DENDN+P F F + EN+ + IG V A D DS EN ++ Y L+ N YF+I + G I K KFDRE K Y+ T++A DNGEPS + T ++ +++LD NDC P+F++QY + I E G +H LG + A+D+DL ENG V+Y I + N + K+ + G L++YGV+DRE+ +I ++IA D+GKP LS V V + D+ND+KP F +P + +F+NIS++ + G +LA +AED D NG++ + ++ ++ + P ++ DGR+IL + ++ R I DR+++RASD
Sbjct: 7 FYIKLKISENKGSGEDLINLKNYIIIHKLPI---NSSGTYNIISNEPDINNYFILQSHSGILKQRNNIDRETMCKHAD-VCQKIILISINGQVLEVMVDINDENDNIPQFSMRHKTLSIQENSDIGSELSLPTADDLDSEPNSIIRYFIKDIHSRDIRRMNQFQASRYFTIFIKTMNRMKI--PYLKLIKEIDREEIDRFELILIAEDSGKQQGSCTITVSIIDVNDNSPQWPTVNISKTVKECDRQGPLVELQAFDRDDSSTPNGQIKYKIS----DNSPKKELINRLFYIAGSSLFLSSQGLQLMDLKTYITFFITAVDGGGRENSTAVTIEIEDCNDHAPNIAIYKSTASIRENDRTPLVLTSVMVNDDDKGINSQFNCDLNDTTYFTM--VKEDVYNQSNGR----QLFMYNIKKIPDTFFDRESLSFYSVLIRCIDLGRPPLVGEKLFTVTIIDENDNAPKFGSDDIRFTLTENNNIGAPIGYVRAYDPDSNENGRVSYQILNNDENYYFTITILGKIEAKWKFDREIKDQYSLTIMAKDNGEPSLNDTCTVHIRILDVNDCVPVFKQQYFYQITEGNGLATIHAILGKVTADDKDLGENGTVYYAIRQKYDHSNRQNNIGLNLLKINLE--GILNIYGVVDREQMVSIQAEIIAYDNGKPQLSAVANVIVDVLDVNDNKPKFKYPINKM-NFINISTDSQVGKVLANFEAEDPDKGENGTITYSIISHKHMEQNLPYQLQNDGRLILTKYLRER-EGIRLPDRLIIRASD 762
BLAST of Protocadherin-1 vs. Planmine SMEST
Match: SMESG000007877.1 (SMESG000007877.1) HSP 1 Score: 436.032 bits (1120), Expect = 4.314e-134 Identity = 265/704 (37.64%), Postives = 401/704 (56.96%), Query Frame = 1
Query: 505 LCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSS-IKDL-EMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKL----VVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYS-LDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLS---PVTIEKDGRVILKESIKSRSHRITQSDRILVRASD 2586
+C+ D C I++IS + E+ I D ND +P F+ + LSI E+ IG + LP A DLDS+ I Y I++ +F+ F+ IK + MKI P LK+IK+IDRE +++ L+A D+ ++G I ++I D+NDNSPQW + TVKEC + L+AFD DD + N ++ +KI NS K I + + + +G+ M L + VDGGG +N+T +TI I+DCND+AP I+I +A I+EN RT +LT + V D+D +N +F+C LNDTTY + V + N R + +Y I+ + FDRE + FYSVLI CID G P L + F+V ++DENDN+P F F + EN+ + IG V A D DS EN ++ Y L+ N YF+I + G I K KFDRE K Y+ T++A DNGEPS + T ++ +++LD NDC P+F++QY + I E G +H LG + A+D+DL ENG V+Y I + N + K+ + G L++YGV+DRE+ +I ++IA D+GKP LS V V + D+ND+KP F +P + +F+NIS++ + G +LA +AED D NG++ + ++ ++ + P ++ DGR+IL + ++ R I DR+++RASD
Sbjct: 1 MCKHADV-CQKIILISINGQVLEVMVDINDENDNIPQFSMRHKTLSIQENSDIGSELSLPTADDLDSEPNSIIRYFIKDIHSRDIRRMNQFQASRYFTIFIKTMNRMKI--PYLKLIKEIDREEIDRFELILIAEDSGKQQGSCTITVSIIDVNDNSPQWPTVNISKTVKECDRQGPLVELQAFDRDDSSTPNGQIKYKIS----DNSPKKELINRLFYIAGSSLFLSSQGLQLMDLKTYITFFITAVDGGGRENSTAVTIEIEDCNDHAPNIAIYKSTASIRENDRTPLVLTSVMVNDDDKGINSQFNCDLNDTTYFTM--VKEDVYNQSNGR----QLFMYNIKKIPDTFFDRESLSFYSVLIRCIDLGRPPLVGEKLFTVTIIDENDNAPKFGSDDIRFTLTENNNIGAPIGYVRAYDPDSNENGRVSYQILNNDENYYFTITILGKIEAKWKFDREIKDQYSLTIMAKDNGEPSLNDTCTVHIRILDVNDCVPVFKQQYFYQITEGNGLATIHAILGKVTADDKDLGENGTVYYAIRQKYDHSNRQNNIGLNLLKINL--EGILNIYGVVDREQMVSIQAEIIAYDNGKPQLSAVANVIVDVLDVNDNKPKFKYPINKM-NFINISTDSQVGKVLANFEAEDPDKGENGTITYSIISHKHMEQNLPYQLQNDGRLILTKYLRER-EGIRLPDRLIIRASD 687
BLAST of Protocadherin-1 vs. Planmine SMEST
Match: SMESG000066775.1 (SMESG000066775.1) HSP 1 Score: 429.098 bits (1102), Expect = 4.625e-131 Identity = 281/786 (35.75%), Postives = 435/786 (55.34%), Query Frame = 1
Query: 451 LNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSFIFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKI--------ENYFKSTDIMTERFEDCFKFSSIKDLEMKI--IQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMK-LVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNIYFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTK---RFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVGNESLS--PVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNGDSKASKKSPDKNFNEDYKSKSYNSNYI 2760
LN +G L + S +DRE +C+ CS + + + ++ I D+ND VP F + ++I E++PIG LPVA D DS KYG+ +Y I EN K+ + F+F IK+ + K I P L++IK IDRE + F L+A D + G + + + D+NDN+P+W YK+ ++EC + +I L A D DD N N + +++ + + + + +S+I YI+ N L L + G+ + + + DG G N T + I+I+DCND+ P+ISI +R K+ EN++ ILT + VKDED N F C LND+ L+LK + IY+IET + SFDREK+ Y+V I C+D+G+P ++S Q+FS+ ++D NDN+P F I F ++EN+ S +G V A D DS N I YS+ N F+I++YG I +K KFDRE+ Y F V A DNGEP + + + VK+ D NDC P+F K Y F I ESYG + L I+A D+DL +NG V Y + P + P K K R ++++ +G +S+YG +DREE S+I + V A D G P LS + T+ + + DLND+ PVF FPS+ + +FVN+S E+E G + + +D D +NG++ L+ + P I+ +G +I+ S+K S+ + DR++++ASD +N ++ + +L +RY + N+ P K S S + NF ++ K+ N N I
Sbjct: 65 LNRTSGDLIVKSFLDRETICENTKETCSMKLYLDQDTHAIQIVIEINDINDNVPVFQTTQKVINIQENIPIGTTYPLPVAQDKDSYKYGVKTYYIARCQGIDQENQVKT-------IGNNFQFFQIKNPKSKQEEIYPSLEIIKNIDREEFVSFVFILIAADFGNQTGSCTVTVLVTDVNDNAPEWTKDNYKVNIQECQSEGDILELIANDRDDPNTKNGLVSYQL-SDRTEDRKIVSQIFYINGNKLHLTNNRISGLINRNNIRIYITATDGNGRMNETSVDIAIEDCNDHPPVISIANRFGKVLENQKQKIILTTVQVKDEDKGRNGMFECSLNDSGKLNLKNIRFDD-----------NFAIYKIETYPDTSFDREKISVYTVEIKCVDQGNPAMSSMQKFSINIIDVNDNAPRFVNKIKMFHVVENNPIGSTVGQVRAMDLDSSNNGHIVYSILN-SNDNFAISIYGEIQSKIKFDREKTDSYEFVVTARDNGEPQLNDSMVVKVKIQDINDCTPVFEKDYFFRITESYGESIKNERLEQIKATDKDLGQNGTVKYRLIDVKP-IGIPGNSKLKAELRNLIKVSFDGAISIYGNLDREEISSIQLLVQAFDDGYPSLSTTTTIIIEVLDLNDNAPVFLFPSN-NMNFVNVSVEWEIGKTICTVKTKDLDQGINGTITHSLINSNKRENFPFKIQSEGEIIIAHSMKEFSNFRSLPDRLIIKASDLGQN-PKNNIATLYIRY---IHSLTNSNPTSIGKKSHSSDNNNFG--FRLKNDNKNPI 822
BLAST of Protocadherin-1 vs. Planmine SMEST
Match: SMESG000059440.1 (SMESG000059440.1) HSP 1 Score: 419.853 bits (1078), Expect = 8.022e-128 Identity = 302/881 (34.28%), Postives = 461/881 (52.33%), Query Frame = 1
Query: 262 LNFHFSISKLDKSSSLF---EIELKENKPIHS--ELINLKAKLPTAFKEAKHRFVIISGNVRLRNLIQLNFVTGSLHLISSVDREELCQQKDNDCSHIVIISFGSF----IFELTFLIIDMNDEVPTFAKQEIELSILEDVPIGHVIDLPVASDLDSQKYGIASYKIENYFKSTDIMTERFEDCFKFSSIKDLEMKIIQPQLKVIKKIDRETREKYSFTLVALDTEGKRGHVNIVLNIKDINDNSPQWIGLPYKITVKECTTSREIFSLKAFDADDQNNINSKLDFKIDTAKLGNSRKXXXXXXXXXXXXXXXEGALKGMAEMKLVVPLKVVDGGGLQNTTDLTISIKDCNDNAPLISITSRSAKIKENKRTLEILTILTVKDEDLEMNCEFSCHLNDTTYLHLKEVMSRSLSTKNERPKRGMVIIYQIETNENKSFDREKVDFYSVLIICIDKGSPQLTSSQQFSVIVLDENDNSPIFTKSIYEFEIMENSVGSSEIGSVSAPDKDSQENAKIKYSLDEIGNI----YFSINMYGVIFTKEKFDREQKSLYNFTVIASDNGEPSRSSTASILVKVLDQNDCKPIFRKQYEFNIVESYGNMAVHNNLGLIEANDEDLDENGLVWYEIGATSPYVNNPDAEKTKRFKVQITKNGKLSLYGVIDREEQSTIYIDVIARDHGKPPLSNSITVTVTLNDLNDHKPVFTFPSSASGSFVNISSEFETGYLLAKLDAEDKDYALNGSVVFELVG-NESLSPVTIEKDGRVILKESIKSRSHRITQSDRILVRASDQCENCHQSEVGSLILRYYWPMKGYINNYPNGDSKASKKSPDKNFNEDYKSKSYNSNYIIILYCXXXXXXXXXXXXXXXXXYFYSAGRNLNGL 2862
L F +++ K + S L+ E K N PI + +LI + K K + N R+LI ++ G + + S++DREE+CQ + C +++ F IFEL IID+ND P+F E + I E+V LPVA D DS+KYG+ Y Y KS I + +E+ F+ I P L+VI +DRE + + F L A D G +G I++ I D+NDN+PQW+GLPY+ + ECTT ++ L A D DD I ++ FKI + N + RI YI+ + L L GALK E K + + DG G N T + + IKDCND+ P+I + S S KIKEN+++ ++T +TV DED +N EFSC LNDT ++ L + + L ++ I+Q+ + FDREK YSV +IC D G+P ++SS+ ++ + DENDN P F F I E++ EIG V A D DS N I YS+ IG+ F IN G I + DRE K Y FTV A DNGEP+ + + I + VLD ND P Y F IVES+ H +G + A+D D+ +NG + + + S ++ +Q+ GK+ +G IDRE+ I + V D+G PP + + TV + + D+ND++P FT+P + +++NI+ + G ++ ++ A D+D+ LNGS+++ L N + +I+ DG++ILK+ + + +I DR++V A DQ S +L +RY+ P + + N +S SK K++ + N IIL L + +I ++V + IY Y G+ L+ L
Sbjct: 8 LFFLYTVVKSEFSVKLYLSVEENQKPNSPIGNLIKLIQNQTKSTEILKTKSFQLESEKSNTYGRHLISVDQKKGDIWVTSAIDREEICQPI-SKCLTGAFLNYIIFADHQIFELQIEIIDINDNFPSFQPDEKTIKIPENVARSSEFSLPVAKDRDSEKYGVKKY----YLKS--ISSSIYENYFELID----HGNNINPYLRVIGDLDRENIKSFEFHLYASDGGGNQGKCRIIVEITDVNDNTPQWVGLPYRKEISECTTEAKVLQLNAQDKDDPQTIGGQIRFKI-SENSQNYEMIVRIFYITESILYLNIGALKSFKENKASIVVIAADGEGRSNETTIELEIKDCNDHRPVIKVHSSSLKIKENEKSKILVTRITVTDEDQGINSEFSCSLNDTNFVSLDSMYTSPLENGGQKK------IFQLNSIPGLYFDREKASRYSVEVICNDNGTPTMSSSEIITIFISDENDNPPHFETEFKTFSISEDAKIGHEIGIVIAKDSDSSPNNIITYSI--IGDYEVKETFGINHNGQIHLNKILDREVKDRYEFTVEAKDNGEPNLNDSCKIRIIVLDVNDNIPEISTSYSFKIVESWEREHKHFYIGKLNASDRDIGQNGTFRFRVRSRSTPID-----------IQVYNEGKIIYFGNIDREKVDKIDVLVDVIDNGNPPRTATTTVHIEVLDVNDNRPKFTYPLLNAHNYLNITDDMAAGSIVGEVKATDEDFGLNGSIIYNLTNQNHTKDLFSIQSDGQIILKKKLDT---KIKNPDRLVVEARDQG-TPSLSATTTLYIRYFKPRDSF--DRSNENSMNSKYINPKDYPRTVNKSNGLPNNAIILVLLVVSIMMIVIVVGGIAIYIYCRGKGLSRL 851 The following BLAST results are available for this feature:
BLAST of Protocadherin-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30034737 ID=SMED30034737|Name=Protocadherin-1|organism=Schmidtea mediterranea sexual|type=transcript|length=3701bpback to top protein sequence of SMED30034737-orf-1 >SMED30034737-orf-1 ID=SMED30034737-orf-1|Name=SMED30034737-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1090bp MYSMNMISIIMYIGIVCLNFHFSISKLDKSSSLFEIELKENKPIHSELINback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|
