RAD51

Overview
NameRAD51 (AIW60888.1)
Smed IDSMED30034520
Length (bp)1082
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of RAD51 (SMED30034520) t-SNE clustered cells

Violin plots show distribution of expression levels for RAD51 (SMED30034520) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of RAD51 (SMED30034520) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for RAD51 (SMED30034520) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30034520

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30034520SMESG000056159.1 SmedASXL_006619SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30034520SMESG000056159.1 SmedASXL_006619SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
cephalic gangliaSMED30034520SMESG000056159.1 dd_Smed_v4_8626_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30034520SMESG000056159.1 dd_Smed_v4_8626_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30034520SMESG000056159.1 dd_Smed_v6_8626_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
ovarySMED30034520SMESG000056159.1 DN304366ncbi_smed_estsPMID:16344473
Zayas et al., 2005		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30034520SMESG000056159.1 DN304366ncbi_smed_estsPMID:16344473
Zayas et al., 2005		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
parenchymaSMED30034520SMESG000056159.1 SMED30034520smed_20140614PMID:26457503
Tu et al., 2015		whole organism asexual adult colorimetric in situ hybridization evidence
zeta neoblastSMED30034520SMESG000056159.1 dd_Smed_v4_8626_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
neoblastSMED30034520SMESG000056159.1 SmWIOct06_002241GPL14150_gene_modelsPMID:22385657
Wagner et al., 2012		whole organism asexual adult cDNA to DNA expression microarray evidence
neoblastSMED30034520SMESG000056159.1 SmWIOct06_043731GPL14150_gene_modelsPMID:22385657
Wagner et al., 2012		whole organism asexual adult cDNA to DNA expression microarray evidence
neoblastSMED30034520SMESG000056159.1 SMED_03124_V2_1GPL14150_gene_modelsPMID:22385657
Wagner et al., 2012		whole organism asexual adult cDNA to DNA expression microarray evidence
neoblastSMED30034520SMESG000056159.1 SMED_03124_V2_1GPL14150PMID:22385657
Wagner et al., 2012		whole organism asexual adult cDNA to DNA expression microarray evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of RAD51 vs. Ensembl Human
Match: RAD51 (RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817])

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 266/330 (80.61%), Postives = 300/330 (90.91%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. Ensembl Human
Match: RAD51 (RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817])

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 266/330 (80.61%), Postives = 300/330 (90.91%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. Ensembl Human
Match: RAD51 (RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817])

HSP 1 Score: 464.537 bits (1194), Expect = 1.675e-164
Identity = 238/342 (69.59%), Postives = 276/342 (80.70%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLV------------PLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  +  +              L  + +++     S ++  T           GG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILTESRSVARLECNSVILVYCTLRLSGSSDSPASASRVVGTT-----------GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 340
[Close]
BLAST of RAD51 vs. Ensembl Human
Match: RAD51 (RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817])

HSP 1 Score: 464.537 bits (1194), Expect = 1.675e-164
Identity = 238/342 (69.59%), Postives = 276/342 (80.70%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLV------------PLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  +  +              L  + +++     S ++  T           GG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILTESRSVARLECNSVILVYCTLRLSGSSDSPASASRVVGTT-----------GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 340
[Close]
BLAST of RAD51 vs. Ensembl Human
Match: RAD51 (RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817])

HSP 1 Score: 390.963 bits (1003), Expect = 2.403e-136
Identity = 180/235 (76.60%), Postives = 209/235 (88.94%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMH 790
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMH
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMH 244
[Close]
BLAST of RAD51 vs. Ensembl Celegans
Match: rad-51 (DNA repair protein RAD51 homolog [Source:UniProtKB/TrEMBL;Acc:L8E822])

HSP 1 Score: 394.815 bits (1013), Expect = 4.665e-137
Identity = 193/316 (61.08%), Postives = 256/316 (81.01%), Query Frame = 2 
Query:  131 LKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVD-GASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            + KLE +GIS+ DI KL EAGY++ ES+ +  ++ L ++KG+S+ K +KI++ A K V +GFTT AE H KRS+++Q+ TGS   D+LL GG+ETGSITE++GE+RTGKTQ+CHSLAV CQLP+D+GGGEGKC+YIDT  TFRPER++A+A+RY +    VLEN+A ARAYN++H   L+++A AMMSESRYA+++VD ATA +R +Y+GRG+L+ RQM L+ FL+ L +LADE+GVAV+ITNQVVAQVD GASMF AD KKPIGG+I+AH STTRLYLRKG+GE R+ K+  SP LPE+EA ++I   GI DA+E
Sbjct:   46 IDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEAEATYSITNHGIEDARE 361
[Close]
BLAST of RAD51 vs. Ensembl Celegans
Match: rad-51 (DNA repair protein RAD51 homolog [Source:UniProtKB/TrEMBL;Acc:L8E822])

HSP 1 Score: 394.43 bits (1012), Expect = 5.220e-137
Identity = 193/316 (61.08%), Postives = 256/316 (81.01%), Query Frame = 2 
Query:  131 LKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVD-GASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            + KLE +GIS+ DI KL EAGY++ ES+ +  ++ L ++KG+S+ K +KI++ A K V +GFTT AE H KRS+++Q+ TGS   D+LL GG+ETGSITE++GE+RTGKTQ+CHSLAV CQLP+D+GGGEGKC+YIDT  TFRPER++A+A+RY +    VLEN+A ARAYN++H   L+++A AMMSESRYA+++VD ATA +R +Y+GRG+L+ RQM L+ FL+ L +LADE+GVAV+ITNQVVAQVD GASMF AD KKPIGG+I+AH STTRLYLRKG+GE R+ K+  SP LPE+EA ++I   GI DA+E
Sbjct:   41 IDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEAEATYSITNHGIEDARE 356
[Close]
BLAST of RAD51 vs. Ensembl Celegans
Match: rad-51 (DNA repair protein RAD51 homolog [Source:UniProtKB/TrEMBL;Acc:L8E822])

HSP 1 Score: 394.045 bits (1011), Expect = 2.607e-136
Identity = 193/316 (61.08%), Postives = 256/316 (81.01%), Query Frame = 2 
Query:  131 LKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVD-GASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            + KLE +GIS+ DI KL EAGY++ ES+ +  ++ L ++KG+S+ K +KI++ A K V +GFTT AE H KRS+++Q+ TGS   D+LL GG+ETGSITE++GE+RTGKTQ+CHSLAV CQLP+D+GGGEGKC+YIDT  TFRPER++A+A+RY +    VLEN+A ARAYN++H   L+++A AMMSESRYA+++VD ATA +R +Y+GRG+L+ RQM L+ FL+ L +LADE+GVAV+ITNQVVAQVD GASMF AD KKPIGG+I+AH STTRLYLRKG+GE R+ K+  SP LPE+EA ++I   GI DA+E
Sbjct:   79 IDKLESSGISSGDISKLKEAGYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEAEATYSITNHGIEDARE 394
[Close]
BLAST of RAD51 vs. Ensembl Fly
Match: spn-A (gene:FBgn0003479 transcript:FBtr0085589)

HSP 1 Score: 439.884 bits (1130), Expect = 3.451e-155
Identity = 221/320 (69.06%), Postives = 264/320 (82.50%), Query Frame = 2 
Query:  119 GPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGA-SMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            GPL + KL G  I+A+DIK L +A  H++ES+    KK L +I GL   KV++I+  A+KLVPLGF +A  F+Q R++++QL+TGSKE DKLL GG+ETGSITEIFGEFR GKTQ+CH+LAVTCQLP+   GGEGKC+YIDTE TFRPERL A+A+RY L+ +EVL+NVA+ RA+N+D Q +L+  AA M+ ESRYALL+VDSA ALYR+DY GRGEL+ARQ HL  FLR L RLADEFGVAVVITNQV A +DGA  MF  D KKPIGG+IMAH+STTRLYLRKG+GETRICKIYDSPCLPESEAMFAILPDGIGDA+E
Sbjct:   18 GPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPGMF--DAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAILPDGIGDARE 335
[Close]
BLAST of RAD51 vs. Ensembl Fly
Match: spn-A (gene:FBgn0003479 transcript:FBtr0085590)

HSP 1 Score: 402.905 bits (1034), Expect = 1.942e-141
Identity = 202/279 (72.40%), Postives = 238/279 (85.30%), Query Frame = 2 
Query:  242 SIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGA-SMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            +I GL   KV++I+  A+KLVPLGF +A  F+Q R++++QL+TGSKE DKLL GG+ETGSITEIFGEFR GKTQ+CH+LAVTCQLP+   GGEGKC+YIDTE TFRPERL A+A+RY L+ +EVL+NVA+ RA+N+D Q +L+  AA M+ ESRYALL+VDSA ALYR+DY GRGEL+ARQ HL  FLR L RLADEFGVAVVITNQV A +DGA  MF  D KKPIGG+IMAH+STTRLYLRKG+GETRICKIYDSPCLPESEAMFAILPDGIGDA+E
Sbjct:    2 AIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPGMF--DAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAILPDGIGDARE 278
[Close]
BLAST of RAD51 vs. Ensembl Fly
Match: spn-D (gene:FBgn0003482 transcript:FBtr0085116)

HSP 1 Score: 68.1662 bits (165), Expect = 1.051e-12
Identity = 41/133 (30.83%), Postives = 63/133 (47.37%), Query Frame = 2 
Query:  359 QLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVA----ERYG-----LSGTEVLENVAYARAYNTDH-QNELLVQAAAMMSESRYALLVVDS 727
            ++ TG K  D    GG+  G + E+ G   TGKTQ+C  L +  Q+P   GG EG  L+IDT   F P+RL+ +A     +Y          ++L+ + Y R    D     +L     ++      L+V+DS
Sbjct:   45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVDHPDIKLIVIDS 177
[Close]
BLAST of RAD51 vs. Ensembl Fly
Match: spn-B (gene:FBgn0003480 transcript:FBtr0082933)

HSP 1 Score: 67.781 bits (164), Expect = 2.294e-12
Identity = 74/250 (29.60%), Postives = 109/250 (43.60%), Query Frame = 2 
Query:  359 QLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLL----AVAERYGLSGTEVLENVAYARAYNTDHQNELLV-QAAAMMSESRYALLVVDSATALYR--TDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRI---------CKIYDSPCLPESEAMFAILPDGI 1060
            +++ G    D+   GGV T  ITE+ G    GKTQ+   L++  QLP +LGG      YI TE +F   RLL    A  +R+       L N+        +     ++ +   +M +    L+++DS  A++R   DY  R        H+ R   ALL  AD++  AVV  NQ VA  DG        + P  G   AH   TRL + +   + R+          +I  SP  P   A F I  +G+
Sbjct:   87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHGIGLIIIDSVAAIFRLYNDYLERAR------HMRRLADALLSYADKYNCAVVCVNQ-VATRDGQD------EIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEFLITAEGV 323
[Close]
BLAST of RAD51 vs. Ensembl Zebrafish
Match: rad51 (RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286])

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 253/320 (79.06%), Postives = 293/320 (91.56%), Query Frame = 2 
Query:  116 MGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             GP P+ +LE +GIS+ DIKKL + G+H++E++ Y PKK L +IKG+SE K DKI+  A+K+VP+GFTTA EFHQ+R+EIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGL G++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQ HL RFLR LLRLADEFGVAVVITNQVVAQVDGA+MF+ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   21 FGPQPVSRLEQSGISSSDIKKLEDGGFHTVEAVAYAPKKELLNIKGISEAKADKILTEAAKMVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 340
[Close]
BLAST of RAD51 vs. Ensembl Zebrafish
Match: rad51 (RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286])

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 253/320 (79.06%), Postives = 293/320 (91.56%), Query Frame = 2 
Query:  116 MGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             GP P+ +LE +GIS+ DIKKL + G+H++E++ Y PKK L +IKG+SE K DKI+  A+K+VP+GFTTA EFHQ+R+EIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGL G++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQ HL RFLR LLRLADEFGVAVVITNQVVAQVDGA+MF+ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   21 FGPQPVSRLEQSGISSSDIKKLEDGGFHTVEAVAYAPKKELLNIKGISEAKADKILTEAAKMVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 340
[Close]
BLAST of RAD51 vs. Ensembl Zebrafish
Match: dmc1 (DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93])

HSP 1 Score: 329.717 bits (844), Expect = 1.469e-111
Identity = 173/314 (55.10%), Postives = 222/314 (70.70%), Query Frame = 2 
Query:  140 LEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES--RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            L+  GI+  DIKKL   G  +++ IQ   ++ L +IKGLSE KVDKI EAA KL+  GF TA+E+  KR ++  +TTGS EFDKLL GGVE+ +ITE FGEFRTGKTQ+ H+L VT QLP + G   GK ++IDTE TFRPERL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGR E RI KI+DSP +PE+EA FAI   GI DAK+
Sbjct:   29 LQKHGINVADIKKLKSVGICTVKGIQMTTRRALCNIKGLSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDTENTFRPERLKDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRAELRIAKIFDSPHMPENEATFAITAGGITDAKD 342
[Close]
BLAST of RAD51 vs. Ensembl Zebrafish
Match: dmc1 (DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93])

HSP 1 Score: 329.717 bits (844), Expect = 1.469e-111
Identity = 173/314 (55.10%), Postives = 222/314 (70.70%), Query Frame = 2 
Query:  140 LEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES--RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            L+  GI+  DIKKL   G  +++ IQ   ++ L +IKGLSE KVDKI EAA KL+  GF TA+E+  KR ++  +TTGS EFDKLL GGVE+ +ITE FGEFRTGKTQ+ H+L VT QLP + G   GK ++IDTE TFRPERL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGR E RI KI+DSP +PE+EA FAI   GI DAK+
Sbjct:   29 LQKHGINVADIKKLKSVGICTVKGIQMTTRRALCNIKGLSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDTENTFRPERLKDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRAELRIAKIFDSPHMPENEATFAITAGGITDAKD 342
[Close]
BLAST of RAD51 vs. Ensembl Zebrafish
Match: rad51 (RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286])

HSP 1 Score: 314.694 bits (805), Expect = 4.517e-108
Identity = 159/182 (87.36%), Postives = 174/182 (95.60%), Query Frame = 2 
Query:  530 LYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            +YIDTEGTFRPERLLAVAERYGL G++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQ HL RFLR LLRLADEFGVAVVITNQVVAQVDGA+MF+ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:    1 MYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 182
[Close]
BLAST of RAD51 vs. Ensembl Xenopus
Match: rad51 (RAD51 recombinase [Source:NCBI gene;Acc:549147])

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 264/337 (78.34%), Postives = 304/337 (90.21%), Query Frame = 2 
Query:   65 MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            MA +   +A+ A EEE  GP  + +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K +KI+  A+KLVP+GFTTA EFHQ+RSEIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:    1 MAMQAHYEAE-ATEEENFGPQAISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKAEKILAEAAKLVPMGFTTATEFHQRRSEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 336
[Close]
BLAST of RAD51 vs. Ensembl Xenopus
Match: rad51 (RAD51 recombinase [Source:NCBI gene;Acc:549147])

HSP 1 Score: 459.914 bits (1182), Expect = 2.051e-163
Identity = 229/297 (77.10%), Postives = 266/297 (89.56%), Query Frame = 2 
Query:   65 MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTR 955
            MA +   +A+ A EEE  GP  + +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K +KI+  A+KLVP+GFTTA EFHQ+RSEIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTR
Sbjct:    1 MAMQAHYEAE-ATEEENFGPQAISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKAEKILAEAAKLVPMGFTTATEFHQRRSEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTR 296
[Close]
BLAST of RAD51 vs. Ensembl Xenopus
Match: mcu (mitochondrial calcium uniporter [Source:Xenbase;Acc:XB-GENE-1012212])

HSP 1 Score: 292.738 bits (748), Expect = 3.429e-97
Identity = 160/305 (52.46%), Postives = 206/305 (67.54%), Query Frame = 2 
Query:  167 DIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESR--YALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            DIKKL   G  +I+ IQ   +K L +IKGLSE KV+KI EAA+K++  GF TA E+  KR  +  ++TGS+EFD  +   +        F EFRTGKTQ+ H+L VT QLP   G   GK ++IDTE TFRP+RL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KIYDSP +PE+EA FAI   GI DAKE
Sbjct:   23 DIKKLKSVGICTIKGIQMTTRKALCNIKGLSEAKVEKIKEAANKVIEPGFLTAFEYSAKRRMVFHISTGSQEFDLKIHIMMFFP-----FQEFRTGKTQLAHTLCVTAQLPGPNGYTGGKIIFIDTENTFRPDRLHDIADRFSVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEPGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITSGGINDAKE 322
[Close]
BLAST of RAD51 vs. Ensembl Xenopus
Match: mcu (mitochondrial calcium uniporter [Source:Xenbase;Acc:XB-GENE-1012212])

HSP 1 Score: 291.582 bits (745), Expect = 7.753e-97
Identity = 160/305 (52.46%), Postives = 205/305 (67.21%), Query Frame = 2 
Query:  167 DIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESR--YALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            DIKKL   G  +I+ IQ   +K L +IKGLSE KV+KI EAA+K++  GF TA E+  KR  +  ++TGS+EFDKLL GG+E+ +ITE FG              VT QLP   G   GK ++IDTE TFRP+RL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KIYDSP +PE+EA FAI   GI DAKE
Sbjct:   26 DIKKLKSVGICTIKGIQMTTRKALCNIKGLSEAKVEKIKEAANKVIEPGFLTAFEYSAKRRMVFHISTGSQEFDKLLGGGIESMAITETFG--------------VTAQLPGPNGYTGGKIIFIDTENTFRPDRLHDIADRFSVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEPGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITSGGINDAKE 316
[Close]
BLAST of RAD51 vs. Ensembl Xenopus
Match: mcts1 (malignant T-cell amplified sequence 1 [Source:Xenbase;Acc:XB-GENE-998581])

HSP 1 Score: 89.3521 bits (220), Expect = 2.416e-19
Identity = 95/333 (28.53%), Postives = 150/333 (45.05%), Query Frame = 2 
Query:  176 KLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVE--------AASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAE---------------------RYGLSGTEVLENVAYARAYNTDHQNELLVQAAA----MMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPK-KPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAK 1072
            KLI  G+ ++E+I       L+   G+S  +  ++++        ++S  +    T      Q++S+   +T  S   D++L GG+    ITEI G    GKTQ+C  LAV  Q+P   GG  G+ ++IDTE +FR ERL+ +A                          +  E+L  + Y   ++     ELL Q       + S  +  L+V+DS    +R  +    +LS R   L  F + L+ LA  F +AVV+TNQ+  ++ G S    D K  P  G    HAST RL L   + + R   +  SP   ++   + I   G  DA+
Sbjct:   25 KLIATGFRTVETILEFNAVELSKEAGISNEEALEVLQILKGEAQSSSSYQIIQKHTAFDLLGQEQSQGFVITFCSA-LDEILGGGIPVAKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGETVFIDTECSFRLERLMDIANACVQHCNLIAQGHQDKDHIKAMQTFTLNEILSQIYY---FSCHDYIELLAQINLLPDFLSSHPKVKLVVIDSIAFPFRHSFE---DLSLRTRLLNGFGQQLISLAHNFNLAVVLTNQMTTKI-GPS----DSKLVPALGESWGHASTIRLVLH-WKSKQRFVTLCKSPSQKKATVPYGITSQGFRDAE 344
[Close]
BLAST of RAD51 vs. Ensembl Mouse
Match: Rad51 (RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890])

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 266/329 (80.85%), Postives = 299/329 (90.88%), Query Frame = 2 
Query:   89 ADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            AD + EEE  GP P+ +LE  GI+A D+KKL EAGYH++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   11 ADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. Ensembl Mouse
Match: Rad51 (RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890])

HSP 1 Score: 328.561 bits (841), Expect = 7.046e-113
Identity = 151/204 (74.02%), Postives = 178/204 (87.25%), Query Frame = 2 
Query:   89 ADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES 700
            AD + EEE  GP P+ +LE  GI+A D+KKL EAGYH++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM ES
Sbjct:   11 ADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVES 214
[Close]
BLAST of RAD51 vs. Ensembl Mouse
Match: Dmc1 (DNA meiotic recombinase 1 [Source:MGI Symbol;Acc:MGI:105393])

HSP 1 Score: 332.798 bits (852), Expect = 8.016e-113
Identity = 178/340 (52.35%), Postives = 235/340 (69.12%), Query Frame = 2 
Query:   65 MAAKQMVQADVA-QEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESR--YALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            M   Q+VQ +   Q++E      +  L+  GI+  DIKKL   G  +I+ IQ   ++ L ++KGLSE KV+KI EAA+KL+  GF TA ++ ++R  +  +TTGS+EFDKLL GG+E+ +ITE FGEFRTGKTQ+ H+L VT QLP   G   GK ++IDTE TFRP+RL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KIYDSP +PE+EA FAI   GIGDAKE
Sbjct:    1 MKEDQVVQEESGFQDDEESLFQDIDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVEKIKEAANKLIEPGFLTAFQYSERRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE 340
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BLAST of RAD51 vs. Ensembl Mouse
Match: Rad51 (RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890])

HSP 1 Score: 310.071 bits (793), Expect = 2.338e-105
Identity = 161/193 (83.42%), Postives = 176/193 (91.19%), Query Frame = 2 
Query:  422 ITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKI 1000
            ITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTR+    G    R C+I
Sbjct:    2 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRVGNPVGVFIPRGCQI 194
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BLAST of RAD51 vs. Ensembl Mouse
Match: Dmc1 (DNA meiotic recombinase 1 [Source:MGI Symbol;Acc:MGI:105393])

HSP 1 Score: 241.121 bits (614), Expect = 1.594e-77
Identity = 144/314 (45.86%), Postives = 185/314 (58.92%), Query Frame = 2 
Query:  140 LEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESR--YALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            L+  GI+  DIKKL   G  +I+ IQ   ++ L ++KGLSE KV+KI EAA+KL+  GF TA ++ ++R  +  +TTGS+EFDKLL GG+E+ +ITE FGEFRTGKT          QL   L G                                             +HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KIYDSP +PE+EA FAI   GIGDAKE
Sbjct:   27 LQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVEKIKEAANKLIEPGFLTAFQYSERRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT----------QLSHTLCG---------------------------------------------EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE 285
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BLAST of RAD51 vs. UniProt/SwissProt
Match: sp|P70099|RAD51_CRIGR (DNA repair protein RAD51 homolog 1 OS=Cricetulus griseus OX=10029 GN=RAD51 PE=2 SV=1)

HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0
Identity = 266/330 (80.61%), Postives = 300/330 (90.91%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GISA D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MFTADPKKPIGGNI+AHASTTRLYLRKGRGETRICK+YDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGISANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIIAHASTTRLYLRKGRGETRICKVYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. UniProt/SwissProt
Match: sp|Q06609|RAD51_HUMAN (DNA repair protein RAD51 homolog 1 OS=Homo sapiens OX=9606 GN=RAD51 PE=1 SV=1)

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 266/330 (80.61%), Postives = 300/330 (90.91%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARA+NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. UniProt/SwissProt
Match: sp|Q08297|RAD51_MOUSE (DNA repair protein RAD51 homolog 1 OS=Mus musculus OX=10090 GN=Rad51 PE=1 SV=1)

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 266/329 (80.85%), Postives = 299/329 (90.88%), Query Frame = 2 
Query:   89 ADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            AD + EEE  GP P+ +LE  GI+A D+KKL EAGYH++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   11 ADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. UniProt/SwissProt
Match: sp|Q8MKI8|RAD51_CANLF (DNA repair protein RAD51 homolog 1 OS=Canis lupus familiaris OX=9615 GN=RAD51 PE=2 SV=1)

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 266/330 (80.61%), Postives = 299/330 (90.61%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             AD + EEE  GP P+ +LE  GI+A D+KKL EAG+H++E++ Y PKK L SIKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   10 NADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELISIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 339
[Close]
BLAST of RAD51 vs. UniProt/SwissProt
Match: sp|P37383|RAD51_CHICK (DNA repair protein RAD51 homolog 1 OS=Gallus gallus OX=9031 GN=RAD51A PE=2 SV=1)

HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0
Identity = 265/328 (80.79%), Postives = 299/328 (91.16%), Query Frame = 2 
Query:   92 DVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            D + EEE  GP P+ +LE  GI+A D+KKL EAGYH++ES+ + PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ+TTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGLSG++VL+NVAYAR +NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAKE
Sbjct:   12 DTSAEEESFGPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKE 339
[Close]
BLAST of RAD51 vs. TrEMBL
Match: A0A0A0V2M3 (DNA repair protein RAD51 homolog OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 2 
Query:   65 MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRALLRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE
Sbjct:    1 MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRALLRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 337
[Close]
BLAST of RAD51 vs. TrEMBL
Match: A0A4S2LG03 (DNA repair protein RAD51 homolog OS=Opisthorchis felineus OX=147828 GN=CRM22_009134 PE=3 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 286/343 (83.38%), Postives = 314/343 (91.55%), Query Frame = 2 
Query:   62 IMAAKQM-----VQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            +M+A+Q+        D   +E C GP+P++KLE AG++A DIKKL EAG+HS+ESIQ+VPKK L +IKG+SE K DKI EAA KLVP GFTTA EFHQKRSEIIQLTTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D+GGGEGKCLYIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARAYNTDHQ ELL+ AAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MFTADPKKPIGGNIM HASTTRLYLRKGRGETRICKIYDSPCLPE+EAM+AILPDGIGDAK+
Sbjct:   44 VMSAQQLRPLSGAVEDAVDDENC-GPVPIQKLESAGVAAADIKKLREAGFHSVESIQFVPKKALLAIKGISEAKADKITEAAQKLVPFGFTTATEFHQKRSEIIQLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNTDHQMELLINAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIMGHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMYAILPDGIGDAKD 385
[Close]
BLAST of RAD51 vs. TrEMBL
Match: A0A0R3SSI7 (DNA repair protein RAD51 homolog OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS8258 PE=3 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 283/329 (86.02%), Postives = 311/329 (94.53%), Query Frame = 2 
Query:   89 ADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            A V +EEE  GP+P++KLEG+GISA D+KKL EAG++S+ESIQ+VPKK L +IKG+SE K DKI++AA KLVP GFTTA EFHQKRSEIIQLTTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLPVD+GGGEGKCLYIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARAYNTDHQ ELLV AAAMMSESRYALL+VDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MF+ADPKKPIGGNIM HASTTRLYLRKGRGETR+CKIYDSPCLPE+EAM+AILPDGIGDAK+
Sbjct:   12 AAVTEEEENAGPIPIQKLEGSGISASDVKKLQEAGFYSVESIQFVPKKALLNIKGISEMKADKILDAAKKLVPFGFTTATEFHQKRSEIIQLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPVDMGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNTDHQMELLVNAAAMMSESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNIMGHASTTRLYLRKGRGETRVCKIYDSPCLPEAEAMYAILPDGIGDAKD 340
[Close]
BLAST of RAD51 vs. TrEMBL
Match: G7YDC4 (DNA repair protein RAD51 homolog OS=Clonorchis sinensis OX=79923 GN=CLF_105309 PE=3 SV=1)

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 284/328 (86.59%), Postives = 308/328 (93.90%), Query Frame = 2 
Query:   92 DVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            DV  +E C GP+P++KLE AG++A DIKKL EAG+HS+ESIQ+VPKK L +IKG+SE K DKI EAA KLVP GFTTA EFHQKRSEIIQLTTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D+GGGEGKCLYIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARAYNTDHQ ELL+ AAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MFTADPKKPIGGNIM HASTTRLYLRKGRGETRICKIYDSPCLPE+EAM+AILPDGIGDAK+
Sbjct:   15 DVVDDENC-GPVPIQKLESAGVAAADIKKLREAGFHSVESIQFVPKKALLAIKGISEAKADKITEAAQKLVPFGFTTATEFHQKRSEIIQLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNTDHQMELLINAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIMGHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMYAILPDGIGDAKD 341
[Close]
BLAST of RAD51 vs. TrEMBL
Match: A0A4S2LG69 (DNA repair protein RAD51 homolog OS=Opisthorchis felineus OX=147828 GN=CRM22_009134 PE=3 SV=1)

HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0
Identity = 283/328 (86.28%), Postives = 307/328 (93.60%), Query Frame = 2 
Query:   92 DVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            D   +E C GP+P++KLE AG++A DIKKL EAG+HS+ESIQ+VPKK L +IKG+SE K DKI EAA KLVP GFTTA EFHQKRSEIIQLTTGSKE DKLLQGG+ETGSITE+FGEFRTGKTQICH+LAVTCQLP+D+GGGEGKCLYIDTEGTFRPERLLAVAERYGLSG++VL+NVAYARAYNTDHQ ELL+ AAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MFTADPKKPIGGNIM HASTTRLYLRKGRGETRICKIYDSPCLPE+EAM+AILPDGIGDAK+
Sbjct:   15 DAVDDENC-GPVPIQKLESAGVAAADIKKLREAGFHSVESIQFVPKKALLAIKGISEAKADKITEAAQKLVPFGFTTATEFHQKRSEIIQLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNTDHQMELLINAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIMGHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMYAILPDGIGDAKD 341
[Close]
BLAST of RAD51 vs. Ensembl Cavefish
Match: rad51 (RAD51 recombinase [Source:NCBI gene;Acc:103041530])

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 256/322 (79.50%), Postives = 294/322 (91.30%), Query Frame = 2 
Query:  110 ECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            +  GP PL +LE  GISA D+KKL +AG+H+IE++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+R+EIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGL G++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQ HL RFLR LLRLADEFGVAVVI+NQVVAQVDGA+MF+ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   19 DSFGPQPLNRLEQCGISASDLKKLEDAGFHTIEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVISNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 340
[Close]
BLAST of RAD51 vs. Ensembl Cavefish
Match: dmc1 (DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93])

HSP 1 Score: 221.861 bits (564), Expect = 3.973e-70
Identity = 137/314 (43.63%), Postives = 180/314 (57.32%), Query Frame = 2 
Query:  140 LEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESR--YALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            L+  GI+  DIKKL   G  +++ IQ   ++ L ++KGLSE KVDKI EAA KL+  GF TA+E+  KR ++  +TTGS+EFDKLL GG+E                    S+A+T                 +  G FR             +G   L +         +HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTRL LRKGRGE RI KI+DSP +PE+EA FAI P G+ DAKE
Sbjct:   29 LQKYGINMADIKKLKSVGICTVKGIQMTTRRALCNVKGLSEAKVDKIKEAAGKLLISGFQTASEYSMKRRQVFHITTGSQEFDKLLGGGIE--------------------SMAIT-----------------EAFGEFR-------------TGKTQLSHTLCG-----EHQMELLDFVAAKFHEEAGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRLSLRKGRGEMRIAKIFDSPDMPENEATFAITPGGVADAKE 287
[Close]
BLAST of RAD51 vs. Ensembl Cavefish
Match: rad51c (RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204])

HSP 1 Score: 86.6557 bits (213), Expect = 1.307e-18
Identity = 94/320 (29.38%), Postives = 141/320 (44.06%), Query Frame = 2 
Query:  176 KLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIV------------EAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAE---------------RYGL---SGTEVLENVAYARAYNTDHQNELLVQAAA----MMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQV-DGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESE 1030
            KLI  G+H+   +  V    L    G+S+ +  +++            EAAS+ V     TA +   +      + T   E D +L GGV  G  TEI G    GKTQ+C  LAV  Q+P+  GG  GK +YIDTEG+F  +R++ +AE               R  L   +  ++L  +   R +      ELL +A      +       L+V+DS    +R D+    +LS R   L    + L+ LA +   A+V+TNQ+  +V DG S        P  G    HA+T RL L     +T    +  +PC   S+
Sbjct:   17 KLIHFGFHTAADLLDVQPLQLCKEAGISQDEAVEVLQTLRGDAQSDQQEAASESV-----TALDLLHQEQIHSGVVTFCSELDAVLGGGVPVGKTTEICGAPGVGKTQLCIQLAVDVQIPLCFGGLGGKAVYIDTEGSFVVQRVVDMAEAAVEHCTLLAEDEEQRKALEEFTKEKILSGIFLIRCHG---YVELLAEAYLLPDFLAKHPEVRLVVIDSIAFPFRHDFD---DLSQRTRLLNGLAQKLILLATQHSAAIVLTNQMTTKVSDGQSKLI-----PALGESWGHAATQRLILHWDGPQTM---MLPTPCFAVSK 317
[Close]
BLAST of RAD51 vs. Ensembl Cavefish
Match: rad51c (RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204])

HSP 1 Score: 84.7297 bits (208), Expect = 4.614e-18
Identity = 95/326 (29.14%), Postives = 140/326 (42.94%), Query Frame = 2 
Query:  176 KLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIV------------EAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAE---------------RYGL---SGTEVLENVAYARAYNTDHQNELLVQAAA----MMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQV-DGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAIL 1048
            KLI  G+H+   +  V    L    G+S+ +  +++            EAAS+ V     TA +   +      + T   E D +L GGV  G  TEI G    GKTQ+C  LAV  Q+P+  GG  GK +YIDTEG+F  +R++ +AE               R  L   +  ++L  +   R +      ELL +A      +       L+V+DS    +R D+    +LS R   L    + L+ LA +   A+V+TNQ+  +V DG S        P  G    HA+T RL L            +D    PE E +   L
Sbjct:   30 KLIHFGFHTAADLLDVQPLQLCKEAGISQDEAVEVLQTLRGDAQSDQQEAASESV-----TALDLLHQEQIHSGVVTFCSELDAVLGGGVPVGKTTEICGAPGVGKTQLCIQLAVDVQIPLCFGGLGGKAVYIDTEGSFVVQRVVDMAEAAVEHCTLLAEDEEQRKALEEFTKEKILSGIFLIRCHGY---VELLAEAYLLPDFLAKHPEVRLVVIDSIAFPFRHDFD---DLSQRTRLLNGLAQKLILLATQHSAAIVLTNQMTTKVSDGQSKLI-----PALGESWGHAATQRLILH-----------WDGVKSPEGECLILCL 328
[Close]
BLAST of RAD51 vs. Ensembl Cavefish
Match: xrcc3 (X-ray repair cross complementing 3 [Source:NCBI gene;Acc:103027311])

HSP 1 Score: 62.003 bits (149), Expect = 2.083e-10
Identity = 70/260 (26.92%), Postives = 109/260 (41.92%), Query Frame = 2 
Query:  359 QLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEV----LENVAYARAYNTDHQNEL------LVQAAAMMSESRYA-LLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTAD------PKKPIGGNIMAHASTTRLYLRKGRG---------ETRICKIYDSPCLPESEAMFAILPDGI 1060
            +L+      D LL+GG+    ITE+ GE   GKTQ    L ++ Q P + GG     +YI TE +F  +RL  +  +       V    + ++ ++     +H  +L      + Q   M+ E     L+VVDS  AL+RT++    E   R  HL  F   L RL+      V   NQV   VDG +    D        +P  G   A+    RL L +  G           R  ++  +P LP +  +  +  +G+
Sbjct:   82 RLSLACPVLDNLLRGGLPLRGITELAGESAAGKTQFALQLCLSVQYPQEHGGLGSGAVYICTEDSFPIKRLRQLITQQARLRPNVPQALIRSLRFSDNIYIEHTADLEALQACVSQRVPMLLERGLVRLVVVDSVAALFRTEFQA-DEAIERARHLLAFSSTLHRLSHTHAAPVFCINQVSDVVDGPNPGRCDYGLVDSKVQPALGIAWANQVMVRLMLWRQEGCLRSGGRTSAPRRLEVVFAPHLPRASCLCGVWEEGV 340
[Close]
BLAST of RAD51 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002572.1 (pep scaffold:Pmarinus_7.0:GL481125:3469:15813:1 gene:ENSPMAG00000002329.1 transcript:ENSPMAT00000002572.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 257/321 (80.06%), Postives = 294/321 (91.59%), Query Frame = 2 
Query:  116 MGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSE-SRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             GP P  +LE  G+SA D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +Y+DTEGTFRPERLLAVAER+GLSG++VL+NVAYARAYN+DHQ +LL QA+AMM+E SRYALL+VDSATALYRTDYSGRGEL+ARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MFTADPKKPIGGNIMAH+STTRLY RKGRGETRICKIYDSPCLPESEAMFAI  DGIGD+K+
Sbjct:   17 FGPQPASRLEQCGVSANDVKKLEEAGFHTVEAVAYAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQISTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYVDTEGTFRPERLLAVAERFGLSGSDVLDNVAYARAYNSDHQTQLLYQASAMMAESSRYALLIVDSATALYRTDYSGRGELAARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIMAHSSTTRLYFRKGRGETRICKIYDSPCLPESEAMFAINADGIGDSKD 337
[Close]
BLAST of RAD51 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002568.1 (pep scaffold:Pmarinus_7.0:GL481125:3469:15813:1 gene:ENSPMAG00000002329.1 transcript:ENSPMAT00000002568.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 448.358 bits (1152), Expect = 3.928e-159
Identity = 233/330 (70.61%), Postives = 273/330 (82.73%), Query Frame = 2 
Query:  116 MGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEI----IQLTTGSKEFDKLL-----QGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES-RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             GP P  +LE  G+SA D+KKL EAG+H++E++ Y PKK L +IKG+SE K DKI+      V   F  +   H  ++ I    ++L    +E   ++      GG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +Y+DTEGTFRPERLLAVAER+GLSG++VL+NVAYARAYN+DHQ +LL QA+AMM+ES RYALL+VDSATALYRTDYSGRGEL+ARQMHLARFLR LLRLADEFGVAVVITNQVVAQVDGA+MFTADPKKPIGGNIMAH+STTRLY RKGRGETRICKIYDSPCLPESEAMFAI  DGIGD+K+
Sbjct:   17 FGPQPASRLEQCGVSANDVKKLEEAGFHTVEAVAYAPKKELLNIKGISEAKADKIL-----FVEFYFIVSK--HANKNVICYHAVRLGGIGQEIIMVVGLVYSLGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYVDTEGTFRPERLLAVAERFGLSGSDVLDNVAYARAYNSDHQTQLLYQASAMMAESSRYALLIVDSATALYRTDYSGRGELAARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIMAHSSTTRLYFRKGRGETRICKIYDSPCLPESEAMFAINADGIGDSKD 339
[Close]
BLAST of RAD51 vs. Ensembl Sea Lamprey
Match: dmc1 (DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93])

HSP 1 Score: 327.405 bits (838), Expect = 2.066e-111
Identity = 175/332 (52.71%), Postives = 224/332 (67.47%), Query Frame = 2 
Query:   86 QADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES--RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            + D+   EE      +  L+  GI+  DIKKL   G  +I  IQ   +KTL +IKG+SE KVDKI EA SK++  GF TA E+ +KR  +  ++TGS+E DKLL GGVE+ +ITE FGEFRTGKTQ+ H+  VT QL    G   GK + IDTE TFRPERL  +AER+ +    VL+NV YARAY ++HQ ELL   A    E   ++ LL++DS  AL+R D++GRGEL+ RQ  LA+ L  L ++++E+ VA+ ITNQ+ A    A  F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KIYDSP LPE+E  FAI   G+ DAKE
Sbjct:   12 EVDLHNSEEESFFQDIDMLQKHGINVADIKKLKTVGICTIRGIQMSTRKTLCNIKGISEAKVDKIKEAVSKIIEPGFLTALEYGEKRKNVFHISTGSQELDKLLGGGVESMAITEAFGEFRTGKTQMAHTFCVTAQLATPKGYAGGKVILIDTENTFRPERLRDIAERFNVDPDAVLDNVLYARAYTSEHQMELLDYVAGKFHEEGGQFKLLIIDSIMALFRVDFTGRGELADRQQKLAQMLSRLQKISEEYNVAIFITNQMTADPGAAMSFQADPKKPIGGHILAHASTTRISLRKGRGEIRIAKIYDSPDLPENETSFAITGGGVADAKE 343
[Close]
BLAST of RAD51 vs. Ensembl Sea Lamprey
Match: xrcc3 (X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116])

HSP 1 Score: 85.5001 bits (210), Expect = 5.585e-19
Identity = 72/261 (27.59%), Postives = 117/261 (44.83%), Query Frame = 2 
Query:  356 IQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLL----AVAERYGLSGTEVLENVAYARAYNTDHQNE-------LLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKK--PIGGNIMAHASTTRLYLRKGRGE-------------TRICKIYDSPCLPESEAMFAILPDGI 1060
            ++L+ G    D  LQGG     ++E+ GE  TGKTQIC  L++T Q P + GG E   +Y+ TE  F  +RL     A A+       +VL  +++      +H  +       +  +   ++S     L+VVDS  AL+R+++S   E  AR   L +F   L  L++ +   V+  NQV   V G    +    K  P  G   A+    R+ + +G  E              R  ++  +P LP+S   +A+   G+
Sbjct:   78 VRLSLGCPVLDAFLQGGFPVPGVSELVGESATGKTQICMQLSLTVQYPREYGGLEAGAVYVCTEDAFPNKRLCQMIQAQAKMREDVPPDVLAKISFGENIYIEHAADVASLYTCITRRLPVLLSRGVVRLIVVDSIAALFRSEFSVH-EAVARAQQLRKFGAQLHELSNTYSAPVICVNQVTGNVSGQDHGSGAQSKVIPALGITWANMLLMRIMVSRGHAEGTAPTDVTQQPDVVRTMELVFAPHLPQSSCRYAVTTHGV 337
[Close]
BLAST of RAD51 vs. Ensembl Sea Lamprey
Match: rad51b (RAD51 paralog B [Source:ZFIN;Acc:ZDB-GENE-040426-2750])

HSP 1 Score: 82.4185 bits (202), Expect = 1.787e-18
Identity = 63/220 (28.64%), Postives = 94/220 (42.73%), Query Frame = 2 
Query:  125 LPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAE----RYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSE---SRYALLVVDSATALYRTDYSGR 763
            +  KKL   G+ A   ++L +   H+ +    +    L  + G S   V ++    S+       TA E  + R       T     D+ LQGG+  GSITE+ G    GKTQ C  L+    LP  LGG +G  +YIDTE  F  ERL+ +A      Y  +   V+        Y       +L +  ++  E    R  LLV+DS  ++ R +   R
Sbjct:    1 MSWKKLRRTGVPADVCERLSKHNIHTCQDFLSLSSVELLRVTGKSYATVRQLARVVSRACAPRVITALEM-RDRPMAAFFATSLPALDRDLQGGIPCGSITEVAGPSGCGKTQFCMMLSALATLPASLGGLDGGVIYIDTESAFSAERLVEIARGRHPEYFCTDEHVIAMTNRVHIYRELTTQSVLSRLESLEEELIAKRVRLLVLDSVASVLRKEIDLR 219
[Close]
BLAST of RAD51 vs. Ensembl Yeast
Match: RAD51 (Strand exchange protein; forms a helical filament with DNA that searches for homology; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; homolog of Dmc1p and bacterial RecA protein [Source:SGD;Acc:S000000897])

HSP 1 Score: 422.55 bits (1085), Expect = 3.664e-148
Identity = 219/329 (66.57%), Postives = 270/329 (82.07%), Query Frame = 2 
Query:   92 DVAQEEECMGPL-PLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            D A +E  +G   P++KL+  GI+  D+KKL E+G H+ E++ Y P+K L  IKG+SE K DK++  A++LVP+GF TAA+FH +RSE+I LTTGSK  D LL GGVETGSITE+FGEFRTGK+Q+CH+LAVTCQ+P+D+GGGEGKCLYIDTEGTFRP RL+++A+R+GL   + L NVAYARAYN DHQ  LL  AA MMSESR++L+VVDS  ALYRTD+SGRGELSARQMHLA+F+RAL RLAD+FGVAVV+TNQVVAQVDG   F  DPKKPIGGNIMAH+STTRL  +KG+G  R+CK+ DSPCLPE+E +FAI  DG+GD +E
Sbjct:   69 DEAYDEAALGSFVPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVPMGFVTAADFHMRRSELICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVDGGMAFNPDPKKPIGGNIMAHSSTTRLGFKKGKGCQRLCKVVDSPCLPEAECVFAIYEDGVGDPRE 397
[Close]
BLAST of RAD51 vs. Ensembl Yeast
Match: DMC1 (Meiosis-specific recombinase required for double-strand break repair; also required for pairing between homologous chromosomes; required for the normal morphogenesis of synaptonemal complex; homolog of Rad51p and the bacterial RecA protein; binds ssDNA and dsDNA, forms helical filaments; stimulated by Rdh54p [Source:SGD;Acc:S000000981])

HSP 1 Score: 301.212 bits (770), Expect = 1.719e-101
Identity = 159/318 (50.00%), Postives = 216/318 (67.92%), Query Frame = 2 
Query:  125 LPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMF-TADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            L + +L+  GI+A D++KL   G +++ ++    ++ L  IKGLSE KV+KI EAA K++ +GF  A      R  +  L+TGSK+ D +L GG+ T SITE+FGEFR GKTQ+ H+L VT QLP ++GGGEGK  YIDTEGTFRPER+  +AE Y L     L NV+YARA N++HQ EL+ Q    +S   Y L+VVDS  A +R DY GRGELS RQ  L + L  L RLA+EF VAV +TNQV +    +++F +AD +KPIGG+++AHAS TR+ LRKGRG+ R+ K+ DSP +PE E ++ I   GI D+ +
Sbjct:   17 LSVDELQNYGINASDLQKLKSGGIYTVNTVLSTTRRHLCKIKGLSEVKVEKIKEAAGKIIQVGFIPATVQLDIRQRVYSLSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYARALNSEHQMELVEQLGEELSSGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNVAVFLTNQVQSDPGASALFASADGRKPIGGHVLAHASATRILLRKGRGDERVAKLQDSPDMPEKECVYVIGEKGITDSSD 334
[Close]
BLAST of RAD51 vs. Ensembl Yeast
Match: RAD57 (Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p [Source:SGD;Acc:S000002411])

HSP 1 Score: 72.0182 bits (175), Expect = 2.230e-14
Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 2 
Query:  362 LTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVA------ERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESR--YALLVVDSATALYRTDYSGRG--ELSARQMHXXXXXXXXXXXXDEFGVAVVITNQV 865
             TT     D+LL GG+ T  ITEIFGE  TGK+Q+   LA++ QL    GG  GKC+YI TEG    +RL ++       E+ G++ + +   V+     N +H   + VQ   ++  S+    L+++DS +   R +   +   E    + +L R    L  LA ++ ++VV+ NQV
Sbjct:  100 FTTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLPTQRLESMLSSRPAYEKLGITQSNIF-TVSCNDLINQEHI--INVQLPILLERSKGSIKLVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVVANQV 274
[Close]
BLAST of RAD51 vs. Ensembl Nematostella
Match: EDO28862 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5A2])

HSP 1 Score: 62.7734 bits (151), Expect = 1.176e-12
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 2 
Query:  650 DHQNELLVQAAAMMSES--RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQV 865
            +HQ ELL   AA   E    + LL+VDS  AL+R D++GRGEL+ RQ  LA+ L  L +L++EF VAV ITNQV
Sbjct:   10 EHQYELLDSVAAKFHEEPGVFKLLIVDSVMALFRVDFTGRGELADRQQKLAQMLSRLQKLSEEFNVAVFITNQV 83
[Close]
BLAST of RAD51 vs. Ensembl Nematostella
Match: EDO38351 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD26])

HSP 1 Score: 52.373 bits (124), Expect = 7.159e-8
Identity = 38/133 (28.57%), Postives = 65/133 (48.87%), Query Frame = 2 
Query:  404 GVETGSITEIFGEFRTGKTQICHSLAVTCQLP-----VDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAY--NTDHQNELLVQAAAM----MSESRYALLVVDSATALYRTDYSGRGE 769
            G++ G + E +G+   GKT++   LA  C +P     + LGG     ++IDT+  F+  RL+A+ E Y  + +E L      R +    +   ELL    +M    + +    ++++DS +A Y  D S  GE
Sbjct:   26 GIKAGDVVEFYGKEGCGKTEMLLHLAANCIMPRSWHELYLGGKGVSVIFIDTDYHFQILRLIAIME-YRTAESETLIKQCLTRLFIVRCNSSVELLATLLSMEQLIICKPEICVMMIDSLSAFYWVDRSSGGE 157
[Close]
BLAST of RAD51 vs. Ensembl Medaka
Match: rad51 (RAD51 recombinase [Source:NCBI gene;Acc:101162334])

HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0
Identity = 258/320 (80.62%), Postives = 293/320 (91.56%), Query Frame = 2 
Query:  116 MGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
             GP PL +LE  GIS+ DIKKL +AG+H+IE++ Y PKK L +IKG+SE K DKI+  A+KLVP+GFTTA EFHQ+RSEIIQ++TGSKE DKLLQGG+ETGSITE+FGEFRTGKTQ+CH+LAVTCQLP+D GGGEGK +YIDTEGTFRPERLLAVAERYGL G++VL+NVAYARA+NTDHQ +LL QA+AMM+ESRYALL+VDSATALYRTDYSGRGELSARQ HL RFLR LLRLADEFGVAVVITNQVVAQVDGA+MF+ADPKKPIGGNI+AHASTTRLYLRKGRGETRICKIYDSPCLPE+EAMFAI  DG+GDAK+
Sbjct:   77 FGPQPLSRLEQCGISSSDIKKLEDAGFHTIEAVAYAPKKELLNIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD 396
[Close]
BLAST of RAD51 vs. Ensembl Medaka
Match: dmc1 (DNA meiotic recombinase 1 [Source:NCBI gene;Acc:100192343])

HSP 1 Score: 332.798 bits (852), Expect = 8.777e-113
Identity = 177/339 (52.21%), Postives = 236/339 (69.62%), Query Frame = 2 
Query:   68 AAKQMVQADVA-QEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES--RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            A  Q+V+ D + Q++E      +  L+  GI+  DIKKL   G  +++ IQ   +K L +IKGLSE KV+KI EAA K++ +GF TA E+  KR ++  ++TGS+EFDKLL GGVE+ +ITE FGEFRTGKTQ+ H+L VT QLP + G   GK ++IDTE TFRP+RL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KI+DSP +PE+EA FAI   G+ DAKE
Sbjct:    4 AEDQVVEDDASFQDDEESFFQDIDLLQKHGINMADIKKLKLVGICTVKGIQMTTRKALCNIKGLSEAKVEKIKEAAGKVLNVGFQTAFEYSSKRKQVFHISTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGENGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHGAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRGEMRIAKIFDSPVMPENEATFAISAGGVTDAKE 342
[Close]
BLAST of RAD51 vs. Ensembl Medaka
Match: dmc1 (DNA meiotic recombinase 1 [Source:NCBI gene;Acc:100192343])

HSP 1 Score: 332.798 bits (852), Expect = 8.777e-113
Identity = 177/339 (52.21%), Postives = 236/339 (69.62%), Query Frame = 2 
Query:   68 AAKQMVQADVA-QEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSES--RYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            A  Q+V+ D + Q++E      +  L+  GI+  DIKKL   G  +++ IQ   +K L +IKGLSE KV+KI EAA K++ +GF TA E+  KR ++  ++TGS+EFDKLL GGVE+ +ITE FGEFRTGKTQ+ H+L VT QLP + G   GK ++IDTE TFRP+RL  +A+R+ +    VL+NV YARAY ++HQ ELL   AA   E    + LL++DS  AL+R D+SGRGEL+ RQ  LA+ L  L ++++E+ VAV +TNQ+ A       F ADPKKPIGG+I+AHASTTR+ LRKGRGE RI KI+DSP +PE+EA FAI   G+ DAKE
Sbjct:    4 AEDQVVEDDASFQDDEESFFQDIDLLQKHGINMADIKKLKLVGICTVKGIQMTTRKALCNIKGLSEAKVEKIKEAAGKVLNVGFQTAFEYSSKRKQVFHISTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGENGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHGAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLRKGRGEMRIAKIFDSPVMPENEATFAISAGGVTDAKE 342
[Close]
BLAST of RAD51 vs. Ensembl Medaka
Match: rad51c (RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204])

HSP 1 Score: 113.235 bits (282), Expect = 1.902e-28
Identity = 84/272 (30.88%), Postives = 131/272 (48.16%), Query Frame = 2 
Query:  320 TAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLL----AVAERYGLSGTE--------------VLENVAYARAYN-TDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQV-DGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            TA E  Q+  E   +TT S + D  L+GG+  G +TEI G    GKT +C  L+V  Q+P   GG E + +++DTEG+F  +R++    AV   + L   +              +L N+   R ++  + Q ELL+    +  + R  LLV+DS    +R       +LS R   L    + ++ +A    +AVVITNQ+  ++ D  S        P  G I  HASTTR+ L +  G  ++  I  SPC  ++   + I  +G  DA +
Sbjct:   36 TALELLQRERECGSITTFSSQLDHALKGGLPVGKVTEICGAPGVGKTHLCLQLSVDIQIPRSFGGLEAQVIFMDTEGSFVLQRVVDIAAAVVRHFSLLAVDGEQKDTMQTFNMESILSNIFLVRCHDYVELQAELLLLPDFLRDKPRVRLLVIDSVAFPFRQHLD---DLSQRTRLLQGLAQQVISMATRHNIAVVITNQMTTRLQDSQSHLV-----PALGEIWGHASTTRIIL-QWEGSQQVAAIVKSPCCIDTAIQYQITSEGFRDANQ 298
[Close]
BLAST of RAD51 vs. Ensembl Medaka
Match: xrcc3 (X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116])

HSP 1 Score: 70.0922 bits (170), Expect = 3.347e-13
Identity = 81/306 (26.47%), Postives = 136/306 (44.44%), Query Frame = 2 
Query:  221 VPKKTLASIKGLSEPKVDKIV----EAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERL-LAVAERYGL---------SGTEVLENVAYARAYNTDH-QNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVV--AQVDGASMFTADPKKPIGGNIMAHASTTRLYLRK-----GRGET----RICKIYDSPCLPESEAMFAILPDGI 1060
            +P   +  + GL+ P+V +++     A  +  PL      E        ++L       D LL+GG+  G ITE+ G+   GKTQ+   ++++ Q PV+ GG  G  LYI TE +F   RL   ++E+  L          G    ++V    A + D  Q  L  +A  +++     L+VVDS  AL+R+++     +  R   L  F   L +L+ EF   V+  NQV   A ++      +    P  G   A+    RL +R+      RG+     R  ++  +P L  S+   A+  +G+
Sbjct:    3 LPAVDVQRLTGLAHPEVHQLLTAAAHACRRHAPLSGEAVCE------SGLRLGVSCPVLDGLLRGGLPVGGITELSGQSGAGKTQLALQISLSVQYPVEHGGLGGGALYICTEDSFPIRRLQQMISEQANLRSEVPSSLIRGLRFSDHVYIEHAADLDSLQVCLSRRAPVLLAAGLVRLIVVDSVAALFRSEFQAEDWME-RNKQLLTFSSMLHQLSQEFTTPVLCINQVNEDAMIEKNKQPLSSSVTPALGLAWANQVLVRLMIRRLQKTVSRGDQSSALRQLEVVFAPHLARSKCEVAVWREGV 301
[Close]
BLAST of RAD51 vs. Planmine SMEST
Match: SMESG000056159.1 (SMESG000056159.1)

HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 2 
Query:   65 MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRALLRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE
Sbjct:    1 MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRALLRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 337
[Close]
BLAST of RAD51 vs. Planmine SMEST
Match: SMESG000056159.1 (SMESG000056159.1)

HSP 1 Score: 652.514 bits (1682), Expect = 0.000e+0
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 2 
Query:   80 MVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 1075
            MVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRALLRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE
Sbjct:    1 MVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESIQYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRALLRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE 332
[Close]
BLAST of RAD51 vs. Planmine SMEST
Match: SMESG000035891.1 (SMESG000035891.1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.006e-17
Identity = 71/262 (27.10%), Postives = 121/262 (46.18%), Query Frame = 2 
Query:  377 KEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERY-----------------------GLSGTEVLENVAYARAYNTDHQNELLVQAAAM----MSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICK----IYDSPCLPESEAMFAILPDGIGDA 1069
            ++FD++L GG   G +TEI G    GKTQ+C    ++ Q+P  LGG  G+ +YIDTEG+F  ERL+ +A RY                        L   ++L+++ Y R   TD Q++LL     +    +S  +  L+V+DS    +R D     ++  R   L    + L  +A++FG++V++TNQ+  +    + + A    P  G    H    R+ L+       + +    +      P S +++ I   GI + 
Sbjct:    3 QQFDEMLGGGFPCGKLTEICGYAGIGKTQLCFQACISVQIPECLGGINGEAIYIDTEGSFSTERLILIA-RYTITHCQKISKLMKLSNEELRQVENLDELKMLKSIFYFRC--TD-QSQLLCLTYRLHNFCLSHPKVRLIVIDSIAFHFRYD---SIDIPQRNRILTVLGQNLSNIANQFGISVLLTNQMTTKFIEGAGYAA----PALGESWGHICHIRIQLQNNFTNNSVSRRQAVLLKHNSQPFSSSLYQITIGGIRNV 253
[Close]
BLAST of RAD51 vs. Planmine SMEST
Match: SMESG000021450.1 (SMESG000021450.1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.315e-8
Identity = 46/222 (20.72%), Postives = 94/222 (42.34%), Query Frame = 2 
Query:  320 TAAEFHQKRSEIIQLTTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAER-----YGLSGTEVLENVAYARAYNTDHQNELLVQAAAMMSESRYALLVVDSATALYRT--DYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYL 964
            +A + +++ ++  ++ T     +K+L GG+ +G+ITE+ G   +GK+Q C +        ++    +    YIDT G F   RL  + ++            +L  + +    + D    + +     +   +  LL++D      RT  D   R  +S++ + + +          EF + V++TNQ+        +     +    GN  +H   TR+YL
Sbjct:   40 SALDLYEQMNQ--KVITPLYSLNKILNGGLPSGTITELVGPPGSGKSQFCMTFVANHLNNIN----QSSIFYIDTNGNFSMNRLFQILKKNLTLPLDSDTNNMLSKLYFFEPTDKDDFYAIFINLREYLQAFKPKLLIIDCMAYYIRTISDLVERTRMSSKIISILKKTAI------EFNMTVLLTNQITGVNSNFYL-----ENAALGNSWSHYINTRIYL 244
[Close]
BLAST of RAD51 vs. Planmine SMEST
Match: SMESG000035891.1 (SMESG000035891.1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.263e-8
Identity = 56/228 (24.56%), Postives = 100/228 (43.86%), Query Frame = 2 
Query:  479 AVTCQLPVDLGGGEGKCLYIDTEGTFRPERLLAVAERY-----------------------GLSGTEVLENVAYARAYNTDHQNELLVQAAAM----MSESRYALLVVDSATALYRTDYSGRGELSARQMHXXXXXXXXXXXXDEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICK----IYDSPCLPESEAMFAILPDGIGDA 1069
             ++ Q+P  LGG  G+ +YIDTEG+F  ERL+ +A RY                        L   ++L+++ Y R   TD Q++LL     +    +S  +  L+V+DS    +R D     ++  R   L    + L  +A++FG++V++TNQ+  +    + + A    P  G    H    R+ L+       + +    +      P S +++ I   GI + 
Sbjct:    3 CISVQIPECLGGINGEAIYIDTEGSFSTERLILIA-RYTITHCQKISKLMKLSNEELRQVENLDELKMLKSIFYFRC--TD-QSQLLCLTYRLHNFCLSHPKVRLIVIDSIAFHFRYD---SIDIPQRNRILTVLGQNLSNIANQFGISVLLTNQMTTKFIEGAGYAA----PALGESWGHICHIRIQLQNNFTNNSVSRRQAVLLKHNSQPFSSSLYQITIGGIRNV 219
The following BLAST results are available for this feature:
BLAST of RAD51 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RAD510.000e+080.61RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:981... [more]
RAD510.000e+080.61RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:981... [more]
RAD511.675e-16469.59RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:981... [more]
RAD511.675e-16469.59RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:981... [more]
RAD512.403e-13676.60RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:981... [more]
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BLAST of RAD51 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rad-514.665e-13761.08DNA repair protein RAD51 homolog [Source:UniProtK... [more]
rad-515.220e-13761.08DNA repair protein RAD51 homolog [Source:UniProtK... [more]
rad-512.607e-13661.08DNA repair protein RAD51 homolog [Source:UniProtK... [more]
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BLAST of RAD51 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4
Match NameE-valueIdentityDescription
spn-A3.451e-15569.06gene:FBgn0003479 transcript:FBtr0085589[more]
spn-A1.942e-14172.40gene:FBgn0003479 transcript:FBtr0085590[more]
spn-D1.051e-1230.83gene:FBgn0003482 transcript:FBtr0085116[more]
spn-B2.294e-1229.60gene:FBgn0003480 transcript:FBtr0082933[more]
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BLAST of RAD51 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rad510.000e+079.06RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426... [more]
rad510.000e+079.06RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426... [more]
dmc11.469e-11155.10DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GEN... [more]
dmc11.469e-11155.10DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GEN... [more]
rad514.517e-10887.36RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426... [more]
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BLAST of RAD51 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rad510.000e+078.34RAD51 recombinase [Source:NCBI gene;Acc:549147][more]
rad512.051e-16377.10RAD51 recombinase [Source:NCBI gene;Acc:549147][more]
mcu3.429e-9752.46mitochondrial calcium uniporter [Source:Xenbase;Ac... [more]
mcu7.753e-9752.46mitochondrial calcium uniporter [Source:Xenbase;Ac... [more]
mcts12.416e-1928.53malignant T-cell amplified sequence 1 [Source:Xenb... [more]
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BLAST of RAD51 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rad510.000e+080.85RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890... [more]
Rad517.046e-11374.02RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890... [more]
Dmc18.016e-11352.35DNA meiotic recombinase 1 [Source:MGI Symbol;Acc:M... [more]
Rad512.338e-10583.42RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890... [more]
Dmc11.594e-7745.86DNA meiotic recombinase 1 [Source:MGI Symbol;Acc:M... [more]
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BLAST of RAD51 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P70099|RAD51_CRIGR0.000e+080.61DNA repair protein RAD51 homolog 1 OS=Cricetulus g... [more]
sp|Q06609|RAD51_HUMAN0.000e+080.61DNA repair protein RAD51 homolog 1 OS=Homo sapiens... [more]
sp|Q08297|RAD51_MOUSE0.000e+080.85DNA repair protein RAD51 homolog 1 OS=Mus musculus... [more]
sp|Q8MKI8|RAD51_CANLF0.000e+080.61DNA repair protein RAD51 homolog 1 OS=Canis lupus ... [more]
sp|P37383|RAD51_CHICK0.000e+080.79DNA repair protein RAD51 homolog 1 OS=Gallus gallu... [more]
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BLAST of RAD51 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0A0V2M30.000e+0100.00DNA repair protein RAD51 homolog OS=Schmidtea medi... [more]
A0A4S2LG030.000e+083.38DNA repair protein RAD51 homolog OS=Opisthorchis f... [more]
A0A0R3SSI70.000e+086.02DNA repair protein RAD51 homolog OS=Hymenolepis di... [more]
G7YDC40.000e+086.59DNA repair protein RAD51 homolog OS=Clonorchis sin... [more]
A0A4S2LG690.000e+086.28DNA repair protein RAD51 homolog OS=Opisthorchis f... [more]
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BLAST of RAD51 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rad510.000e+079.50RAD51 recombinase [Source:NCBI gene;Acc:103041530][more]
dmc13.973e-7043.63DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GEN... [more]
rad51c1.307e-1829.38RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-2... [more]
rad51c4.614e-1829.14RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-2... [more]
xrcc32.083e-1026.92X-ray repair cross complementing 3 [Source:NCBI ge... [more]
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BLAST of RAD51 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000002572.10.000e+080.06pep scaffold:Pmarinus_7.0:GL481125:3469:15813:1 ge... [more]
ENSPMAT00000002568.13.928e-15970.61pep scaffold:Pmarinus_7.0:GL481125:3469:15813:1 ge... [more]
dmc12.066e-11152.71DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GEN... [more]
xrcc35.585e-1927.59X-ray repair complementing defective repair in Chi... [more]
rad51b1.787e-1828.64RAD51 paralog B [Source:ZFIN;Acc:ZDB-GENE-040426-2... [more]
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BLAST of RAD51 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
RAD513.664e-14866.57Strand exchange protein; forms a helical filament ... [more]
DMC11.719e-10150.00Meiosis-specific recombinase required for double-s... [more]
RAD572.230e-1432.58Protein that stimulates strand exchange; stimulate... [more]
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BLAST of RAD51 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO288621.176e-1252.70Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO383517.159e-828.57Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of RAD51 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rad510.000e+080.63RAD51 recombinase [Source:NCBI gene;Acc:101162334][more]
dmc18.777e-11352.21DNA meiotic recombinase 1 [Source:NCBI gene;Acc:10... [more]
dmc18.777e-11352.21DNA meiotic recombinase 1 [Source:NCBI gene;Acc:10... [more]
rad51c1.902e-2830.88RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-2... [more]
xrcc33.347e-1326.47X-ray repair complementing defective repair in Chi... [more]
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BLAST of RAD51 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000056159.10.000e+0100.00SMESG000056159.1[more]
SMESG000056159.10.000e+0100.00SMESG000056159.1[more]
SMESG000035891.11.006e-1727.10SMESG000035891.1[more]
SMESG000021450.11.315e-820.72SMESG000021450.1[more]
SMESG000035891.13.263e-824.56SMESG000035891.1[more]
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Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30034520
GenBankAIW60888.1
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30034520 ID=SMED30034520|Name=RAD51|organism=Schmidtea mediterranea sexual|type=transcript|length=1082bp
TTTATACCATTGTCTTTAATGATTTGAAAATATATTAGTACTAAATTGGT
ATTTTAGATATATTATGGCAGCAAAACAAATGGTTCAGGCTGATGTTGCT
CAGGAAGAAGAATGCATGGGTCCTTTGCCTTTGAAAAAATTAGAAGGAGC
TGGTATAAGTGCACAGGACATTAAAAAGTTGATTGAAGCTGGTTATCATT
CAATTGAAAGCATACAATATGTTCCAAAGAAAACACTGGCATCTATAAAG
GGCTTAAGTGAACCTAAAGTAGACAAAATTGTGGAAGCAGCTAGTAAATT
AGTTCCACTTGGATTTACAACAGCCGCTGAATTTCATCAAAAGCGATCAG
AGATTATTCAATTAACTACAGGTTCAAAAGAGTTCGATAAGCTTTTGCAA
GGTGGTGTTGAAACAGGTTCAATCACTGAGATTTTCGGTGAATTCCGTAC
TGGGAAAACACAAATATGTCATTCGCTTGCTGTGACATGTCAGTTGCCCG
TTGATTTGGGTGGTGGAGAAGGAAAATGCTTATACATTGATACAGAAGGT
ACCTTCAGACCGGAAAGATTACTAGCCGTCGCTGAACGGTACGGTTTGTC
GGGAACAGAAGTACTGGAGAATGTAGCGTATGCTCGAGCGTATAATACAG
ATCATCAGAATGAATTGTTAGTTCAAGCTGCAGCTATGATGTCAGAATCC
CGATACGCCCTTTTAGTGGTTGATAGTGCTACTGCTCTTTACAGAACCGA
CTATTCCGGTCGAGGAGAGCTGTCAGCTCGTCAAATGCATCTAGCAAGAT
TCCTTAGAGCCTTGTTACGGTTGGCTGATGAATTCGGTGTAGCCGTTGTC
ATTACGAATCAGGTAGTTGCTCAGGTCGACGGAGCATCGATGTTTACCGC
AGATCCCAAGAAGCCGATAGGCGGAAATATTATGGCACACGCCTCGACAA
CTCGGTTGTATTTGAGGAAAGGTCGAGGTGAGACGAGAATCTGCAAGATC
TACGACAGTCCGTGCTTACCAGAATCCGAGGCGATGTTTGCAATTTTGCC
AGATGGAATCGGTGATGCAAAAGAATGATAGC
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protein sequence of SMED30034520-orf-1

>SMED30034520-orf-1 ID=SMED30034520-orf-1|Name=SMED30034520-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=338bp
MAAKQMVQADVAQEEECMGPLPLKKLEGAGISAQDIKKLIEAGYHSIESI
QYVPKKTLASIKGLSEPKVDKIVEAASKLVPLGFTTAAEFHQKRSEIIQL
TTGSKEFDKLLQGGVETGSITEIFGEFRTGKTQICHSLAVTCQLPVDLGG
GEGKCLYIDTEGTFRPERLLAVAERYGLSGTEVLENVAYARAYNTDHQNE
LLVQAAAMMSESRYALLVVDSATALYRTDYSGRGELSARQMHLARFLRAL
LRLADEFGVAVVITNQVVAQVDGASMFTADPKKPIGGNIMAHASTTRLYL
RKGRGETRICKIYDSPCLPESEAMFAILPDGIGDAKE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0006310DNA recombination
GO:0006974cellular response to DNA damage stimulus
GO:0006259DNA metabolic process
GO:0006281DNA repair
GO:0000724double-strand break repair via homologous recombination
GO:0007131reciprocal meiotic recombination
GO:1990426mitotic recombination-dependent replication fork processing
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000014zeta neoblast
PLANA:0000204ovary
PLANA:0000208testis
PLANA:0000420parapharyngeal region
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
PLANA:0002142parenchyma
Vocabulary: INTERPRO
TermDefinition
IPR011941DNA_recomb/repair_Rad51
IPR033925Rad51_DMC1_RadA
IPR003593AAA+_ATPase
IPR016467DNA_recomb/repair_RecA-like
IPR027417P-loop_NTPase
IPR013632DNA_recomb/repair_Rad51_C
IPR020587RecA_monomer-monomer_interface
IPR020588RecA_ATP-bd
IPR010995DNA_repair_Rad51/TF_NusA_a-hlx
Vocabulary: molecular function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0008094DNA-dependent ATPase activity
GO:0000166nucleotide binding
GO:0000150recombinase activity
GO:0003690double-stranded DNA binding
GO:0003697single-stranded DNA binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 117..304
e-value: 6.6E-8
score: 42.3
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 82..334
e-value: 3.6E-130
score: 432.8
NoneNo IPR availableGENE3DG3DSA:1.10.150.20coord: 21..91
e-value: 3.5E-28
score: 99.4
NoneNo IPR availablePFAMPF14520HHH_5coord: 30..77
e-value: 4.0E-6
score: 27.3
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 92..337
e-value: 6.4E-85
score: 286.6
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 11..337
NoneNo IPR availablePANTHERPTHR22942:SF39DNA REPAIR PROTEIN RAD51 HOMOLOG 1coord: 11..337
IPR011941DNA recombination/repair protein Rad51TIGRFAMTIGR02239TIGR02239coord: 24..337
e-value: 3.2E-181
score: 599.3
IPR016467DNA recombination and repair protein, RecA-likePIRSFPIRSF005856Rad51coord: 9..337
e-value: 2.8E-139
score: 461.3
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 96..267
score: 51.932
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROSITEPS50163RECA_3coord: 274..337
score: 20.875
IPR033925Rad51/DMC1/RadACDDcd01123Rad51_DMC1_radAcoord: 100..333
e-value: 3.44164E-148
score: 414.673
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 99..334
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helicalSUPERFAMILYSSF47794Rad51 N-terminal domain-likecoord: 18..82