Methyltransf_21 domain-containing protein

Overview
NameMethyltransf_21 domain-containing protein
Smed IDSMED30034264
Length (bp)1342
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Methyltransf_21 domain-containing protein (SMED30034264) t-SNE clustered cells

Violin plots show distribution of expression levels for Methyltransf_21 domain-containing protein (SMED30034264) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Methyltransf_21 domain-containing protein (SMED30034264) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Methyltransf_21 domain-containing protein (SMED30034264) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30034264

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parapharyngeal regionSMED30034264h1SMcG0010633 dd_Smed_v4_12885_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30034264h1SMcG0010633 dd_Smed_v4_12885_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
reproductive organSMED30034264h1SMcG0010633 Contig50452uc_Smed_v2PMID:28434803
Rouhana et al., 2017
whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30034264h1SMcG0010633 Contig50452newmark_estsPMID:28434803
Rouhana et al., 2017
whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Methyltransf_21 domain-containing protein vs. TrEMBL
Match: A0A210PEI7 (Methyltransf_21 domain-containing protein OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT08695 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.184e-28
Identity = 75/234 (32.05%), Postives = 123/234 (52.56%), Query Frame = 1
Query:  520 KFNKKILTIFIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNI-QHSNFSSNK--MKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVW 1212
            K+ +  + IF    + +IS  I   G WE   +N  +D ++  P +Q +D G N+GV+T++VA  G +V++VD      + L  S+   +L   VT+ILNA+SN R +  +  V DNIGG ++ QH +   ++  + SI +DDL+  +D   +V +K+DIE  E  A E + E F    V  +L+EW   K      + +K+L      P+LD+     L   +   WP  ++W
Sbjct:  114 KYGETPICIFDPVEDRMISSYIRDYGTWEPDLVNMTIDILQANPAMQFIDLGCNLGVFTLSVAKLGRRVVSVDILSRALDNLQHSLKLGNLTENVTLILNAMSNTREKVKINLVPDNIGGSHVGQHGDMGQHEELIYSIIMDDLLEIIDSG-EVFVKMDIEGHEQKALENSKEFFHKANVKFLLMEWMLHKGKPSGDKIIKYLLSNGLLPYLDYNLREVLPLGRASFWPDNVLW 346          
BLAST of Methyltransf_21 domain-containing protein vs. TrEMBL
Match: K1QRE5 (Methyltransf_21 domain-containing protein OS=Crassostrea gigas OX=29159 GN=CGI_10023278 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.099e-28
Identity = 93/310 (30.00%), Postives = 154/310 (49.68%), Query Frame = 1
Query:  385 STE--VSTKVHTSVTRLKETSLISKEI---------IYV-NVQQFVKKVHAYNKSFLKFNKKIL-------TIFIYGFNDLI--SREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGG---------QNIQHSNFSS--NKMKSIFIDDLVRFVDKDLQ-VVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVWR 1215
            STE  V+ K+  ++    + SLI+K I         +Y  N QQ+ +  H   K+  KF + +L        IFI+   D I  S  I   G WE  ++  +L +++    +Q LD G+N+GVY++ VA  G KV++VDA   N  R+  ++  N   + + ++ NALS++R   S+     NIGG           ++ S  S     +++  +DDL+     DL+ V+IK+D+E  E   F    + FK+  V A+L+EW ++K     ++ + FLSR  F P     +   L   +  SWP +++WR
Sbjct:   93 STEKPVAQKIKAAIRNSTQNSLITKAITTPAPQILRLYARNAQQWTRDDHTC-KALPKFMQAVLRTSAGSLPIFIHNPKDDIHVSNSIHKHGSWEGGYIELVLTFLRQDLDLQFLDLGANLGVYSMAVAKFGRKVVSVDALSINIQRMCATVQTNRFNN-MQLVYNALSDVREVVSLGVDKGNIGGTFVAKDKNPNKVRGSRVSGSYGDVQTATLDDLLELPGFDLKKVIIKMDVEGYENRVFRGGQKFFKNVDVRAVLMEWMWLKTGPAGQEIIDFLSRHGFTPTRPVLARQPLPLNQRLSWPNDVLWR 400          
BLAST of Methyltransf_21 domain-containing protein vs. TrEMBL
Match: K1QJF8 (Methyltransf_21 domain-containing protein OS=Crassostrea gigas OX=29159 GN=CGI_10027079 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.185e-26
Identity = 76/239 (31.80%), Postives = 125/239 (52.30%), Query Frame = 1
Query:  541 TIFIYGFN--DLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQ----NIQH--------SNFSSNKMKSIFIDDLVRF--VDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIV 1209
             IFIY  +  DL+S  ++ +G +E      L + MK  P +Q++D G+NIGVYT++ A  G KVLAV+A   N   L  S++E  L+  V +I NA+SN  +  S+     N+GG     N  H        +  +  ++ SI +DDL+    +    +V IK+DIE  E  A E+A++ F+   VV IL+EW + +NH   ++ + F++   + P         LD  +  +W +++ 
Sbjct:   40 PIFIYQGDQDDLVSGSVLDKGTFESEKEMILSEMMKDDPDLQIIDIGANIGVYTLSCAKAGRKVLAVEALARNLQHLCASVMEGGLQDNVYLIHNAISNNNSFVSLGMHKGNMGGTYVDVNANHIKQLKEGEAQGTYGQVYSITLDDLLELPVIKHFRKVFIKMDIEGFEDRAVERATQFFEKVNVVGILMEWVFHRNHPTAKKIIDFMTERKYNPHACKIGKVPLDVAENENWGLDVA 278          
BLAST of Methyltransf_21 domain-containing protein vs. TrEMBL
Match: K1RD55 (Methyltransf_21 domain-containing protein OS=Crassostrea gigas OX=29159 GN=CGI_10022130 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.226e-24
Identity = 73/254 (28.74%), Postives = 122/254 (48.03%), Query Frame = 1
Query:  490 KVHAYNKSFLKFNKKILTIFIYGF--NDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFS-----------SNKMKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVW 1212
            KV  + ++ L        IF+Y    +  +S +II  G WE H    ++  ++  P +  LD G+NIG +T+ +A  G K +AV+  ++N  RL  S+ +  L   VT++ NA+S+   + ++    +N+GG  +   N             +N + +I +DD++   DK  +VVIK+D+E  E    E  +  FK   V A+ +EW Y  N       +KF+   +F P      +  L E  +  WP  IVW
Sbjct:  201 KVKDFQEATLNTLSGQTPIFVYSETQDKYVSHDIIRTGRWEHHLAVPMVKLLQEDPSLTFLDIGANIGAFTLEMAKLGRKTIAVEPLIDNIKRLCCSVHKGKLGDLVTIVANAISSRHMQVTLGKDLNNVGGTFVNQENPVKKAQIVMNGEYANPVNTILLDDILGLPDKPRRVVIKMDVEGYEHFVLEGGTYFFKQVFVKAVFMEWTYSNNPSIRDSIIKFMVNRDFLPHALSMQDSLL-ESSYDRWPGNIVW 453          
BLAST of Methyltransf_21 domain-containing protein vs. TrEMBL
Match: K1R5I8 (Methyltransf_21 domain-containing protein OS=Crassostrea gigas OX=29159 GN=CGI_10027005 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 7.800e-24
Identity = 70/233 (30.04%), Postives = 122/233 (52.36%), Query Frame = 1
Query:  538 LTIFIY--GFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFSSNK----MKSIFIDDLVRFVD-KDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVWR 1215
            L IF+Y    +  +S  II  G WE+  + ++   +K+ P I  LD G+N+GV+ +T+A  G +V+A+DA  +N  R+  S+  N+L+ R+++I NA+S  R + S+     N+GG  I+    S+N     + ++ +DDL+     K  +VVIK+D+E  E N    A E F + +V  +L+E+   K        ++FL      P         +      +WPM++++R
Sbjct:   75 LDIFVYPTSIDKWVSGRIIREGKWEEDHIQKIYRILKSDPSIIFLDIGANVGVFALTMAKLGNQVVAIDALGDNVGRICASMKTNNLKDRMSIIHNAMSYTREKVSLGKFHLNVGGTFIKKMGVSANSDVIVIDTVLLDDLLELYKFKGRRVVIKMDVETFEANVLNGAFEFFNNVRVEFVLMEFMAHKGKESGDFIVQFLKDFGLEP--------DVSNSNHSTWPMDVMFR 299          
BLAST of Methyltransf_21 domain-containing protein vs. Planmine SMEST
Match: SMESG000035647.1 (SMESG000035647.1)

HSP 1 Score: 226.483 bits (576), Expect = 1.347e-70
Identity = 117/260 (45.00%), Postives = 170/260 (65.38%), Query Frame = 1
Query:  436 TSLISKEIIYVNVQQFVKKVHAYNKSFLKFNKKILTIFIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFSSNKMKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVWR 1215
            + L +++ I +N+Q F +K H++    L+ +KK + IF++   D IS+EI+S+  +E+ WL QL+ ++K  P+  L+DFG NIG YT+  A  G+KV+A+DAN NNT RL+QSII N+L ++V VILNA+SNIR ++SM S   NIGGQ +  S   S  + SI I+DL+    +  +++IKIDI+ SEI++   AS  FK R + AILIEW  IK  I     + FL   N+RPFL+FFS+  L    F+ WP  +VWR
Sbjct:   40 SQLTNQKFINLNIQNFTRKNHSFLSGTLRIDKKGIKIFLHSKQDWISKEILSKSNYERFWLYQLMGFLKNHPQAVLIDFGCNIGAYTLAFAYSGHKVIAIDANRNNTERLIQSIISNNLCNKVVVILNAVSNIRKQYSMISYPKNIGGQFLVDSKNDSYAVNSILINDLLTITSETEELIIKIDIQGSEIDSLLAASVFFKDRNISAILIEWEIIKIDIDCPLLIDFLLLRNYRPFLNFFSDTILPVSSFKLWPNNLVWR 299          
BLAST of Methyltransf_21 domain-containing protein vs. Planmine SMEST
Match: SMESG000040830.1 (SMESG000040830.1)

HSP 1 Score: 218.009 bits (554), Expect = 9.600e-68
Identity = 126/295 (42.71%), Postives = 182/295 (61.69%), Query Frame = 1
Query:  328 YTIVNLNKSTQFIKSFRAGSTEVSTKVHTSVTRLKETSLISKEIIYVNVQQFVKKVHAYNKSFLKFNKKILTIFIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFSSNKMKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVW 1212
            Y I+N+N    F+K  R+GS   S        RLK+  + +  + +V             +S L ++ KIL+I+++  +DLISREII+ G WE  W  +L++Y+KT   I  +D G NIGVYT+  A+ G KV+A+DAN NNT RL QS+I+N+L   VT++ NA S+ R EFSM SV DNIG Q I +S  +S K++SI +DDLVRF+DK     +KIDIEN EI AF KAS LF +  +  +LIEW +IK++  +   + F  + N+RP+ + F+   L+  + +SW   IVW
Sbjct:    8 YVIINVN----FLKE-RSGSINQSV-------RLKQNPVKTPTMDFV-------------ESKLYYDDKILSIYVHNRDDLISREIINTGTWEGGWTKELINYIKTNNGITFIDVGCNIGVYTLIAASLGAKVIAIDANENNTIRLNQSLIKNNLRPLVTLLNNAASDERKEFSMTSVYDNIGHQEIVNSTNNSYKVRSILLDDLVRFIDKSQSAFMKIDIENHEILAFRKASLLFDNVNIKLVLIEWMFIKDNPNVNSLLNFFQKRNYRPYSNMFATTLLNVDQHKSWGQNIVW 277          
BLAST of Methyltransf_21 domain-containing protein vs. Planmine SMEST
Match: SMESG000020353.1 (SMESG000020353.1)

HSP 1 Score: 211.846 bits (538), Expect = 2.430e-65
Identity = 101/236 (42.80%), Postives = 154/236 (65.25%), Query Frame = 1
Query:  508 KSFLKFNKKILTIFIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFSSNKMKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVWR 1215
            K+FL    + L I+++G +DLIS  II+ G WEK W  QL +++ T  + QLLD G N+GVYT+T AA G +V+++D ++ N N L QS+I N  + RV +  NA+SN+R  + ++ + +NIGGQ + ++N + + +  ++IDD+V +  KD  ++IK+DI+  EI A EK+  LF  R V+A+L+EW +IKNH  I  F+ F    ++ P+LDF S   L   K+R WP EIVWR
Sbjct:   49 KAFLYTANRKLIIYVHGPHDLISHHIITHGTWEKEWQTQLSEFIVTNNQPQLLDLGCNVGVYTLTAAALGCRVVSIDVHMKNLNLLQQSVISNGFQGRVWLFYNAVSNVRKGYKLQEIKENIGGQYLLNANETESTVYGVYIDDIVSYFLKDKGIIIKMDIQGFEIKAIEKSKRLFSERNVLAVLVEWIWIKNHPDIFIFIAFFMTRSYNPYLDFKSVIPLSVAKYRKWPTEIVWR 284          
BLAST of Methyltransf_21 domain-containing protein vs. Planmine SMEST
Match: SMESG000071837.1 (SMESG000071837.1)

HSP 1 Score: 211.46 bits (537), Expect = 3.495e-65
Identity = 101/236 (42.80%), Postives = 154/236 (65.25%), Query Frame = 1
Query:  508 KSFLKFNKKILTIFIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFSSNKMKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVWR 1215
            K+FL    + L I+++G +DLIS  II+ G+WEK W  QL +++ T  + QLLD G N+GVYT+T AA G +V+++D  + N N L QS+I N  + RV +  NA+SN+R  + ++ + +NIGGQ + ++N + + +  ++IDD+V +  KD  ++IK+DI+  EI A EK+  LF  R V+A+L+EW +IKNH  I  F+ F    ++ P+LDF S   L   K+R WP EIVWR
Sbjct:   49 KAFLYTANRKLIIYVHGPHDLISHHIITHGIWEKEWQTQLSEFIVTNNQPQLLDLGCNVGVYTLTAAALGCRVVSIDVYMKNLNLLQQSVISNGFQGRVWLFYNAVSNVRKGYKLQEIKENIGGQYLLNANETESTVYGVYIDDIVSYFLKDKGIIIKMDIQGFEIKAIEKSKRLFSERNVLAVLVEWIWIKNHPDIFIFIAFFMTRSYNPYLDFKSVIPLSVAKYRKWPTEIVWR 284          
BLAST of Methyltransf_21 domain-containing protein vs. Planmine SMEST
Match: SMESG000003217.1 (SMESG000003217.1)

HSP 1 Score: 202.601 bits (514), Expect = 1.072e-61
Identity = 104/253 (41.11%), Postives = 157/253 (62.06%), Query Frame = 1
Query:  457 IIYVNVQQFVKKVHAYNKSFLKFNKKILTIFIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYTITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEFSMESVADNIGGQNIQHSNFSSNKMKSIFIDDLVRFVDKDLQVVIKIDIENSEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFLDFFSNFQLDEKKFRSWPMEIVWR 1215
            + Y++V +   + H Y K  LKF +K + I ++G  D +S EII+  +W+   + +LL +MK+   + LLD G  IGV T+ V AH Y V+AVDAN+NNT RL QS+I N +E +VTVI NA+SN + E+SM     N+G Q + +  ++  K+KSIF+D+LV  + + ++V+IKIDI   E+ AF+KAS LF  R +VA+L+ W  ++     ++ + FL    F PF   FS   L+  K   W +EIVW+
Sbjct:   34 VTYLDVMKMRIENHKYEKGILKFKEKHIWILLHGKEDFVSNEIINHHIWDVSSIIELLLFMKSTRPVMLLDIGCGIGVSTLVVGAHNYHVIAVDANINNTKRLTQSVIANQIEHKVTVINNAVSNFKQEYSMTLNPRNVGSQKLMNKRYNEYKVKSIFLDELVPLIHRRIKVIIKIDINGDEVRAFKKASNLFDKRNIVAVLLNWKVVRELSDSQRLIDFLIEKGFAPFDSLFSKRILETMKHEDWNIEIVWK 286          
The following BLAST results are available for this feature:
BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210PEI71.184e-2832.05Methyltransf_21 domain-containing protein OS=Mizuh... [more]
K1QRE52.099e-2830.00Methyltransf_21 domain-containing protein OS=Crass... [more]
K1QJF81.185e-2631.80Methyltransf_21 domain-containing protein OS=Crass... [more]
K1RD555.226e-2428.74Methyltransf_21 domain-containing protein OS=Crass... [more]
K1R5I87.800e-2430.04Methyltransf_21 domain-containing protein OS=Crass... [more]
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Methyltransf_21 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000035647.11.347e-7045.00SMESG000035647.1[more]
SMESG000040830.19.600e-6842.71SMESG000040830.1[more]
SMESG000020353.12.430e-6542.80SMESG000020353.1[more]
SMESG000071837.13.495e-6542.80SMESG000071837.1[more]
SMESG000003217.11.072e-6141.11SMESG000003217.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30034264 ID=SMED30034264|Name=Methyltransf_21 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1342bp
GTGAACAATACGGTAGTTTCTTTGTAGATGTCAATTTTTAATTCCTAATT
TCTCAATATTATTTGCGTACAAAGTTTGAGGTAAGCAAGAAACCACATGA
TAAAAATTGTCATTTAAAAGGCATAATACAAAGTTTGTTTTAAATTTAAA
ATGGTTGAAAAACAAATTTAAAAATTTCCTTGAAATTGGTTTTGTTTTAA
TCAATCAGAAACTATGGAAAGTTGAAGAAATTGTTACATTTAAAATATGC
TCAAAATGTTTGAAAGGAAAATTTTAATTGTGATGTGTTTAGCAGTGATT
GTTATTTTATTATATTTGAACGAGAAATATACAATTGTAAACTTAAATAA
ATCTACCCAATTTATCAAAAGTTTTCGAGCTGGATCAACTGAAGTATCAA
CAAAAGTCCACACTTCTGTTACAAGATTAAAGGAAACCTCCCTAATTAGC
AAGGAAATAATCTATGTGAATGTTCAGCAATTCGTCAAGAAGGTTCATGC
TTATAACAAATCGTTTCTGAAATTTAATAAAAAGATATTAACAATTTTTA
TTTATGGTTTTAATGACTTGATTTCTCGAGAAATCATCTCTCGGGGCATG
TGGGAAAAACACTGGTTGAACCAGTTACTTGACTACATGAAAACGTTTCC
GAGGATTCAATTGCTTGATTTTGGATCCAACATAGGAGTCTATACGATAA
CAGTGGCCGCGCATGGATACAAAGTCCTCGCAGTTGATGCAAATGTTAAC
AATACGAATAGATTAGTTCAGTCTATCATTGAAAATCACTTGGAAAGTCG
AGTTACTGTCATTTTGAATGCTCTCTCAAATATTCGGACAGAATTTTCGA
TGGAAAGTGTCGCAGATAACATTGGCGGTCAGAATATACAGCATTCCAAT
TTTAGTTCAAATAAAATGAAAAGTATTTTCATAGATGATTTAGTTCGATT
CGTCGACAAAGATTTGCAAGTAGTTATCAAAATAGATATTGAAAATTCAG
AAATAAATGCGTTTGAAAAGGCTTCCGAACTCTTCAAATCTCGAAAGGTT
GTGGCGATTTTAATTGAGTGGCATTATATAAAGAATCATATAAAAATTCG
TCAGTTTATGAAATTTCTATCGCGTTTAAATTTTCGTCCGTTTCTGGATT
TCTTTTCAAATTTCCAATTGGATGAAAAAAAATTCCGCAGTTGGCCAATG
GAAATCGTTTGGCGGGTTAATGAATAATTGGGGATTTGGTGGCCATTGTA
TACCCGTAGGGTTTGTTGTAAAGTATTTTTTAATTTCTGGTTTTCAAAAT
GTTGGAATAATTTTGAATTTGTTTAGATCGGAATAGCGTCGT
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protein sequence of SMED30034264-orf-1

>SMED30034264-orf-1 ID=SMED30034264-orf-1|Name=SMED30034264-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=327bp
MLKMFERKILIVMCLAVIVILLYLNEKYTIVNLNKSTQFIKSFRAGSTEV
STKVHTSVTRLKETSLISKEIIYVNVQQFVKKVHAYNKSFLKFNKKILTI
FIYGFNDLISREIISRGMWEKHWLNQLLDYMKTFPRIQLLDFGSNIGVYT
ITVAAHGYKVLAVDANVNNTNRLVQSIIENHLESRVTVILNALSNIRTEF
SMESVADNIGGQNIQHSNFSSNKMKSIFIDDLVRFVDKDLQVVIKIDIEN
SEINAFEKASELFKSRKVVAILIEWHYIKNHIKIRQFMKFLSRLNFRPFL
DFFSNFQLDEKKFRSWPMEIVWRVNE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002089reproductive organ
PLANA:0003117parapharyngeal cell
Vocabulary: INTERPRO
TermDefinition
IPR006342FkbM_mtfrase
IPR029063SAM-dependent_MTases