Ninein-like protein

Overview
NameNinein-like protein
Smed IDSMED30034020
Length (bp)3084
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Ninein-like protein (SMED30034020) t-SNE clustered cells

Violin plots show distribution of expression levels for Ninein-like protein (SMED30034020) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ninein-like protein (SMED30034020) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ninein-like protein (SMED30034020) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30034020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
prepharyngeal regionSMED30034020h1SMcG0011484 SmedASXL_012745SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30034020h1SMcG0011484 SmedASXL_012745SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30034020h1SMcG0011484 Contig13493newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30034020h1SMcG0011484 Contig13493uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
nervous systemSMED30034020h1SMcG0011484 dd_Smed_v4_16759_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30034020h1SMcG0011484 dd_Smed_v4_16759_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30034020h1SMcG0011484 dd_Smed_v4_16759_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30034020h1SMcG0011484 dd_Smed_v4_16759_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Ninein-like protein vs. Ensembl Human
Match: NINL (ninein like [Source:HGNC Symbol;Acc:HGNC:29163])

HSP 1 Score: 96.6709 bits (239), Expect = 1.495e-19
Identity = 65/211 (30.81%), Postives = 110/211 (52.13%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-------------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLD-AITLAAIITYQKELYYFRNQ 1057
            P+K   P  + PE++ +  +W++L VG +G L+  EL  VC  +G+   +++ L+ LF+ +D D DG+VSL EF  GL  +                          +  ++  ++  +S  S   LF+ ID    GF    +V+ +W   GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D A+  AA+  Y +EL Y + Q
Sbjct:  186 PQKSCSPSFDTPESQ-IRGVWEELGVGSSGHLSEQELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQLGLFSHEPALLLESSTRVKPSKAWSHYQVPEESGCHTTTTSSLVSLCSSLRLFSSIDDG-SGFAFPDQVLAMWTQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELM--TVDSAVQQAALACYHQELSYQQGQ 392
[Close]
BLAST of Ninein-like protein vs. Ensembl Human
Match: NINL (ninein like [Source:HGNC Symbol;Acc:HGNC:29163])

HSP 1 Score: 96.6709 bits (239), Expect = 1.760e-19
Identity = 65/211 (30.81%), Postives = 111/211 (52.61%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-------------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLD-AITLAAIITYQKELYYFRNQ 1057
            P+K   P  + PE++ +  +W++L VG +G L+  EL  VC  +G+   +++ L+ LF+ +D D DG+VSL EF  GL  +                          +  ++  ++  +S  S   LF+ ID +  GF    +V+ +W   GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D A+  AA+  Y +EL Y + Q
Sbjct:  186 PQKSCSPSFDTPESQ-IRGVWEELGVGSSGHLSEQELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQLGLFSHEPALLLESSTRVKPSKAWSHYQVPEESGCHTTTTSSLVSLCSSLRLFSSID-DGSGFAFPDQVLAMWTQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELM--TVDSAVQQAALACYHQELSYQQGQ 392
[Close]
BLAST of Ninein-like protein vs. Ensembl Human
Match: NIN (ninein [Source:HGNC Symbol;Acc:HGNC:14906])

HSP 1 Score: 61.6178 bits (148), Expect = 8.821e-9
Identity = 42/192 (21.88%), Postives = 92/192 (47.92%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D + L+ +F   + D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + ++I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGEMLEEVFH--NLDPDGTMSVEDFFYGLFKNGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDDG-MGHASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNSIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. Ensembl Human
Match: NIN (ninein [Source:HGNC Symbol;Acc:HGNC:14906])

HSP 1 Score: 61.6178 bits (148), Expect = 8.821e-9
Identity = 42/192 (21.88%), Postives = 92/192 (47.92%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D + L+ +F   + D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + ++I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGEMLEEVFH--NLDPDGTMSVEDFFYGLFKNGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDDG-MGHASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNSIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. Ensembl Human
Match: NIN (ninein [Source:HGNC Symbol;Acc:HGNC:14906])

HSP 1 Score: 61.2326 bits (147), Expect = 1.201e-8
Identity = 42/192 (21.88%), Postives = 92/192 (47.92%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D + L+ +F   + D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + ++I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGEMLEEVFH--NLDPDGTMSVEDFFYGLFKNGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDDG-MGHASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNSIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. Ensembl Zebrafish
Match: ninl (ninein-like [Source:ZFIN;Acc:ZDB-GENE-130530-768])

HSP 1 Score: 78.1814 bits (191), Expect = 5.158e-14
Identity = 58/194 (29.90%), Postives = 92/194 (47.42%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGL-------------------------KKYXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVL--DYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFR 1051
            V  +W+DL VG  G L   EL  VC+++G+   + + L +LF  +D D DG+VSL+EF +GL                         K          S   LS +    L T +D    G    +KV+ LW   GI N  ++L    L+F++ E + L  L+ AL+ E++  S + I  AA+++Y+ E+ Y +
Sbjct:  208 VRAVWEDLGVGAAGSLNREELSLVCDHIGLKHLEAEELDALFRKLDKDQDGKVSLIEFQSGLFKPHDHASPLSTSTPARPKPLRTISKALEERVVRSTSPSLLSATVGQRLLTRLDDG-SGCTSPEKVMALWTEEGIHNSRDILQTQTLDFSLEERLCLAELTLALDNELLV-SGNGIHQAALVSYKNEINYLQ 399
[Close]
BLAST of Ninein-like protein vs. Ensembl Xenopus
Match: saraf (store-operated calcium entry-associated regulatory factor [Source:Xenbase;Acc:XB-GENE-997090])

HSP 1 Score: 93.5893 bits (231), Expect = 1.351e-18
Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYX----------------------XXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYY 1045
            V  +W++L VG NG+L   EL  VC  +G+    ++ L+ LF+ +D D DGRVS  EF  GL  +                       +      +   LS      LF+ ID    GF   ++++ +W   GI +G E+L  L+F + E VNL  L+ AL+ E+I  + + I LAA+ +Y+ ELY+
Sbjct:  160 VRDIWEELGVGHNGYLNQQELATVCKNIGLKDLSKEELEDLFNKLDRDGDGRVSFQEFQEGLFSHAPVPISSTPLKHRRPWACFQPMEDSSRMTTTPSLLSAFGGLHLFSSIDDGT-GFGSPEQIMIIWEEEGIEDGKEILTSLDFNLGEQVNLLDLTSALDNELIA-TKNRIHLAALASYKNELYH 344
[Close]
BLAST of Ninein-like protein vs. Ensembl Xenopus
Match: saraf (store-operated calcium entry-associated regulatory factor [Source:Xenbase;Acc:XB-GENE-997090])

HSP 1 Score: 92.8189 bits (229), Expect = 1.781e-18
Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYX----------------------XXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYY 1045
            V  +W++L VG NG+L   EL  VC  +G+    ++ L+ LF+ +D D DGRVS  EF  GL  +                       +      +   LS      LF+ ID    GF   ++++ +W   GI +G E+L  L+F + E VNL  L+ AL+ E+I  + + I LAA+ +Y+ ELY+
Sbjct:  160 VRDIWEELGVGHNGYLNQQELATVCKNIGLKDLSKEELEDLFNKLDRDGDGRVSFQEFQEGLFSHAPVPISSTPLKHRRPWACFQPMEDSSRMTTTPSLLSAFGGLHLFSSIDDG-TGFGSPEQIMIIWEEEGIEDGKEILTSLDFNLGEQVNLLDLTSALDNELIA-TKNRIHLAALASYKNELYH 344
[Close]
BLAST of Ninein-like protein vs. Ensembl Xenopus
Match: saraf (store-operated calcium entry-associated regulatory factor [Source:Xenbase;Acc:XB-GENE-997090])

HSP 1 Score: 93.2041 bits (230), Expect = 1.852e-18
Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYX----------------------XXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYY 1045
            V  +W++L VG NG+L   EL  VC  +G+    ++ L+ LF+ +D D DGRVS  EF  GL  +                       +      +   LS      LF+ ID    GF   ++++ +W   GI +G E+L  L+F + E VNL  L+ AL+ E+I  + + I LAA+ +Y+ ELY+
Sbjct:  160 VRDIWEELGVGHNGYLNQQELATVCKNIGLKDLSKEELEDLFNKLDRDGDGRVSFQEFQEGLFSHAPVPISSTPLKHRRPWACFQPMEDSSRMTTTPSLLSAFGGLHLFSSIDDGT-GFGSPEQIMIIWEEEGIEDGKEILTSLDFNLGEQVNLLDLTSALDNELIA-TKNRIHLAALASYKNELYH 344
[Close]
BLAST of Ninein-like protein vs. Ensembl Xenopus
Match: saraf (store-operated calcium entry-associated regulatory factor [Source:Xenbase;Acc:XB-GENE-997090])

HSP 1 Score: 93.2041 bits (230), Expect = 1.866e-18
Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYX----------------------XXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYY 1045
            V  +W++L VG NG+L   EL  VC  +G+    ++ L+ LF+ +D D DGRVS  EF  GL  +                       +      +   LS      LF+ ID    GF   ++++ +W   GI +G E+L  L+F + E VNL  L+ AL+ E+I  + + I LAA+ +Y+ ELY+
Sbjct:  165 VRDIWEELGVGHNGYLNQQELATVCKNIGLKDLSKEELEDLFNKLDRDGDGRVSFQEFQEGLFSHAPVPISSTPLKHRRPWACFQPMEDSSRMTTTPSLLSAFGGLHLFSSIDDGT-GFGSPEQIMIIWEEEGIEDGKEILTSLDFNLGEQVNLLDLTSALDNELIA-TKNRIHLAALASYKNELYH 349
[Close]
BLAST of Ninein-like protein vs. Ensembl Xenopus
Match: saraf (store-operated calcium entry-associated regulatory factor [Source:Xenbase;Acc:XB-GENE-997090])

HSP 1 Score: 89.7373 bits (221), Expect = 2.737e-18
Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYX----------------------XXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYY 1045
            V  +W++L VG NG+L   EL  VC  +G+    ++ L+ LF+ +D D DGRVS  EF  GL  +                       +      +   LS      LF+ ID +  GF   ++++ +W   GI +G E+L  L+F + E VNL  L+ AL+ E+I  + + I LAA+ +Y+ ELY+
Sbjct:  196 VRDIWEELGVGHNGYLNQQELATVCKNIGLKDLSKEELEDLFNKLDRDGDGRVSFQEFQEGLFSHAPVPISSTPLKHRRPWACFQPMEDSSRMTTTPSLLSAFGGLHLFSSID-DGTGFGSPEQIMIIWEEEGIEDGKEILTSLDFNLGEQVNLLDLTSALDNELI-ATKNRIHLAALASYKNELYH 380
[Close]
BLAST of Ninein-like protein vs. Ensembl Mouse
Match: Ninl (ninein-like [Source:MGI Symbol;Acc:MGI:1925427])

HSP 1 Score: 103.605 bits (257), Expect = 7.317e-22
Identity = 68/208 (32.69%), Postives = 111/208 (53.37%), Query Frame = 2 
Query:  506 RKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-----------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDA-ITLAAIITYQKELYYFRNQ 1057
            RK   P  + PEN  V+ +W +L +G +G L   EL  VC  +G+++ +++ L+ LFS +D D DGRVSL EF  GL  +                        +  ++  ++  +S  S   LF+ +D +  GF   ++V+  WA  GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D  I  AA+  Y++EL Y + Q
Sbjct:  188 RKSCSPSFSTPEN-LVQGIWHELGIGSSGHLNEQELAVVCRSIGLHSLEKQELEELFSKLDQDGDGRVSLAEFQLGLFGHEPPSLPASSSLIKPNRLWSHYQEESGCHTTTTSSLVSVCSGLRLFSSVD-DGSGFAFPEQVISAWAQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELL--TVDGVIQQAALACYRQELSYHQGQ 391
[Close]
BLAST of Ninein-like protein vs. Ensembl Mouse
Match: Nin (ninein [Source:MGI Symbol;Acc:MGI:105108])

HSP 1 Score: 62.003 bits (149), Expect = 4.534e-9
Identity = 42/192 (21.88%), Postives = 90/192 (46.88%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D   L+ +F  +  D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + + I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVF--LSLDPDGTMSVEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTATSSAMTSTIGFRVFSCLDDG-MGQASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNGIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. Ensembl Mouse
Match: Nin (ninein [Source:MGI Symbol;Acc:MGI:105108])

HSP 1 Score: 61.6178 bits (148), Expect = 4.927e-9
Identity = 42/192 (21.88%), Postives = 90/192 (46.88%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D   L+ +F  +  D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + + I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVF--LSLDPDGTMSVEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTATSSAMTSTIGFRVFSCLDDG-MGQASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNGIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. Ensembl Mouse
Match: Nin (ninein [Source:MGI Symbol;Acc:MGI:105108])

HSP 1 Score: 62.003 bits (149), Expect = 5.058e-9
Identity = 42/192 (21.88%), Postives = 90/192 (46.88%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D   L+ +F  +  D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + + I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVF--LSLDPDGTMSVEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTATSSAMTSTIGFRVFSCLDDG-MGQASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNGIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. Ensembl Mouse
Match: Nin (ninein [Source:MGI Symbol;Acc:MGI:105108])

HSP 1 Score: 62.003 bits (149), Expect = 5.058e-9
Identity = 42/192 (21.88%), Postives = 90/192 (46.88%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D   L+ +F  +  D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + + I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVF--LSLDPDGTMSVEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTATSSAMTSTIGFRVFSCLDDG-MGQASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNGIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. UniProt/SwissProt
Match: sp|Q6ZQ12|NINL_MOUSE (Ninein-like protein OS=Mus musculus OX=10090 GN=Ninl PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 5.118e-21
Identity = 68/208 (32.69%), Postives = 111/208 (53.37%), Query Frame = 2 
Query:  506 RKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-----------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDA-ITLAAIITYQKELYYFRNQ 1057
            RK   P  + PEN  V+ +W +L +G +G L   EL  VC  +G+++ +++ L+ LFS +D D DGRVSL EF  GL  +                        +  ++  ++  +S  S   LF+ +D +  GF   ++V+  WA  GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D  I  AA+  Y++EL Y + Q
Sbjct:  188 RKSCSPSFSTPEN-LVQGIWHELGIGSSGHLNEQELAVVCRSIGLHSLEKQELEELFSKLDQDGDGRVSLAEFQLGLFGHEPPSLPASSSLIKPNRLWSHYQEESGCHTTTTSSLVSVCSGLRLFSSVD-DGSGFAFPEQVISAWAQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELL--TVDGVIQQAALACYRQELSYHQGQ 391
[Close]
BLAST of Ninein-like protein vs. UniProt/SwissProt
Match: sp|Q9Y2I6|NINL_HUMAN (Ninein-like protein OS=Homo sapiens OX=9606 GN=NINL PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 8.451e-19
Identity = 65/211 (30.81%), Postives = 111/211 (52.61%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-------------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLD-AITLAAIITYQKELYYFRNQ 1057
            P+K   P  + PE++ +  +W++L VG +G L+  EL  VC  +G+   +++ L+ LF+ +D D DG+VSL EF  GL  +                          +  ++  ++  +S  S   LF+ ID +  GF    +V+ +W   GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D A+  AA+  Y +EL Y + Q
Sbjct:  186 PQKSCSPSFDTPESQ-IRGVWEELGVGSSGHLSEQELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQLGLFSHEPALLLESSTRVKPSKAWSHYQVPEESGCHTTTTSSLVSLCSSLRLFSSID-DGSGFAFPDQVLAMWTQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELM--TVDSAVQQAALACYHQELSYQQGQ 392
[Close]
BLAST of Ninein-like protein vs. UniProt/SwissProt
Match: sp|Q61043|NIN_MOUSE (Ninein OS=Mus musculus OX=10090 GN=Nin PE=1 SV=4)

HSP 1 Score: 62.003 bits (149), Expect = 3.538e-8
Identity = 42/192 (21.88%), Postives = 90/192 (46.88%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D   L+ +F  +  D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + + I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVF--LSLDPDGTMSVEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTATSSAMTSTIGFRVFSCLDDG-MGQASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNGIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. UniProt/SwissProt
Match: sp|Q8N4C6|NIN_HUMAN (Ninein OS=Homo sapiens OX=9606 GN=NIN PE=1 SV=4)

HSP 1 Score: 61.2326 bits (147), Expect = 5.767e-8
Identity = 42/192 (21.88%), Postives = 92/192 (47.92%), Query Frame = 2 
Query:  545 ESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKK------------------------YXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYF 1048
            E ++++ +DL + ++G L   +L  +C   G+   D + L+ +F   + D DG +S+ +F  GL K                        +        ++  ++ +    +F+C+D    G    +++++ W   GI N  E+L  L+F+++  +NL  L+ ALE E++  + ++I  AA+ +++ E+ + 
Sbjct:  185 EKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGEMLEEVFH--NLDPDGTMSVEDFFYGLFKNGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDDG-MGHASVERILDTWQEEGIENSQEILKALDFSLDGNINLTELTLALENELLV-TKNSIHQAALASFKAEIRHL 372
[Close]
BLAST of Ninein-like protein vs. TrEMBL
Match: R7V1Z0 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_201605 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.184e-23
Identity = 68/195 (34.87%), Postives = 110/195 (56.41%), Query Frame = 2 
Query:  527 INEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYXXXXX-----------------XXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIIN-ESLDAITLAAIITYQKELYYFRNQ 1057
            ++  E+E + ++W+ L VG+NG L++ EL  VC ++GM     + LK LF  +D + DG+V L EF  GL ++G+                       ++        +GLF+ +DP   GF +   ++ELW S GI +G ++L+YL+F+++  VNL+ALSKAL  EI + E  +A+  AAI++Y+ EL   R Q
Sbjct:  157 MSNDESEHLREVWRQLGVGQNGALSIEELAIVCEHIGMEQMSDQELKQLFDKLDVNRDGKVGLQEFLNGLFQHGSSTAPSPKQPISNHQQKPQTVRTDASSTDVLDIDAGLFSTLDPEGIGFAKPALIIELWESLGISHGGDILEYLQFSLSSIVNLSALSKALHHEIHHVEGDNAVYQAAIVSYENELRCLRAQ 351
[Close]
BLAST of Ninein-like protein vs. TrEMBL
Match: S9WEH8 (Ninein-like protein OS=Camelus ferus OX=419612 GN=CB1_001350002 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.870e-20
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYXX-----------------------XXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFRNQ 1057
            PRK   P ++ PE+  V  +W+ L VG++G LT  EL  VC  +G+    ++ L+ LFS +D D DGRVSL EF  GL ++ +                             ++  +S  S   LF  +D +  GF   +++V LWA  G+ NG EVL  L+F+++E VNL  L+ ALE E++     A   AA+  Y++EL + + Q
Sbjct:  187 PRKSGSPSLDTPESR-VRDIWEALGVGRSGHLTEQELAVVCQSVGLQGLGKEELEDLFSKLDRDGDGRVSLEEFQLGLCEHRSPALPESSPVNLSGSWSRYQVPEEGGGQTTTSSLVSVCSGPRLFCSVD-DGSGFASPEQIVALWAQEGVHNGREVLQSLDFSVDEKVNLLELTWALENELMMVD-GAAQQAALACYRQELSFCQGQ 391
[Close]
BLAST of Ninein-like protein vs. TrEMBL
Match: A0A1U8C4V0 (ninein-like protein OS=Mesocricetus auratus OX=10036 GN=Ninl PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.432e-19
Identity = 72/209 (34.45%), Postives = 112/209 (53.59%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-----------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDA-ITLAAIITYQKELYYFRNQ 1057
            PRK   P  N PEN+ V+ +W +L VG +G L   EL  VC  +G++  +++ L+ LFS +D D DGRVSL EF  GL  +                        N  ++  ++  +S  S   LF+ +D +  GF   ++V+  WA  GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D  I  AA+  Y++EL Y + Q
Sbjct:  187 PRKSCSPSFNTPENQ-VQSIWHELGVGSSGHLNEQELAVVCRSIGLHGLEKQELEELFSKLDQDGDGRVSLEEFQLGLFGHELPSLPESSSLVKPNRPWSHYQEENGCHTTTTSSLVSVCSGLRLFSSVD-DGSGFAFPEQVISTWAQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELL--TVDGVIQQAALACYRQELNYHQGQ 391
[Close]
BLAST of Ninein-like protein vs. TrEMBL
Match: D4A5N1 (Ninein-like OS=Rattus norvegicus OX=10116 GN=Ninl PE=4 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.936e-19
Identity = 70/209 (33.49%), Postives = 111/209 (53.11%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-----------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDA-ITLAAIITYQKELYYFRNQ 1057
            PRK   P  N PEN+ V+ +W +L VG +G L   EL  VC  +G++  +++ L+ LFS +D D DGRVSL EF  GL  +                        +  ++  ++  +S  S   LF+ +D +  GF   ++V+  WA  GI NG E+L  L+F ++E VNL  L+ AL+ E++  ++D  I  AA+  Y++EL + + Q
Sbjct:  187 PRKSCSPSFNTPENQ-VQGIWHELGVGSSGHLNEQELAVVCRSIGLHGLEKQELEELFSKLDRDGDGRVSLAEFQLGLFGHEPPSLPASSSLIKPNGPWSHYQEESGCHTTTTSSLVSVCSGLRLFSSVD-DGSGFAFPEQVISAWAQEGIQNGREILQSLDFNVDEKVNLLELTWALDNELL--TVDGVIQQAALACYRQELNFHQGQ 391
[Close]
BLAST of Ninein-like protein vs. TrEMBL
Match: A0A2K6FML0 (Ninein like OS=Propithecus coquereli OX=379532 GN=NINL PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.509e-18
Identity = 67/211 (31.75%), Postives = 111/211 (52.61%), Query Frame = 2 
Query:  503 PRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-------------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLD-AITLAAIITYQKELYYFRNQ 1057
            P+K + P  + PE++ V+ +W++L VG +G L   EL  VC  +G+   +++ L+ LF  +D D DGRVSL EF  GL  +                          +  ++  ++  +S      LF+ ID    GF   ++V+ +WA  GI NG E+L  L+F+++E VNL  L+ AL+ E++  ++D A   AA+  Y++EL Y + Q
Sbjct:  187 PQKSRSPSFDTPESQ-VQGIWEELGVGSSGHLNEQELAVVCRSVGLRGLEKEELEDLFHKLDQDGDGRVSLEEFQLGLLSHEPTSLPESSTQVNLSRPWSHYQVPEESGCHTTTTSSLVSLCLGLRLFSSIDDG-TGFAFPEQVMAVWAQEGIQNGGEILQSLDFSVDEKVNLMELTWALDNELM--TVDGAAQQAALACYRQELSYHQGQ 393
[Close]
BLAST of Ninein-like protein vs. Ensembl Cavefish
Match: ninl (ninein like [Source:NCBI gene;Acc:103026678])

HSP 1 Score: 82.0333 bits (201), Expect = 2.376e-15
Identity = 56/192 (29.17%), Postives = 92/192 (47.92%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-------------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFR 1051
            V+ +W++L VG  G L   EL  VC+++G+     + L +LF  +D D DG+VSL EF  GL ++                                 S   LS +    L T +D    G    ++VV LW   GI N  ++L  L+F++ E ++L  L+ AL+ E++  S + I  AA+I+Y+ E+ + +
Sbjct:  211 VKAVWEELGVGSGGSLDRQELSLVCDHIGLKNLQSEELDALFKKLDKDQDGKVSLTEFQKGLFRHGDLPEPTAASTPLRASTQRTFSQALEERVGRSTSPSLLSATVGQRLLTRLDDG-SGCTSPERVVTLWNDEGIRNSRDILQTLDFSLEERLSLAELTLALDNELLV-SGNGIHQAALISYKDEIQFLQ 400
[Close]
BLAST of Ninein-like protein vs. Ensembl Cavefish
Match: ninl (ninein like [Source:NCBI gene;Acc:103026678])

HSP 1 Score: 82.0333 bits (201), Expect = 2.665e-15
Identity = 56/192 (29.17%), Postives = 92/192 (47.92%), Query Frame = 2 
Query:  551 VEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKY-------------------------XXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFR 1051
            V+ +W++L VG  G L   EL  VC+++G+     + L +LF  +D D DG+VSL EF  GL ++                                 S   LS +    L T +D    G    ++VV LW   GI N  ++L  L+F++ E ++L  L+ AL+ E++  S + I  AA+I+Y+ E+ + +
Sbjct:  211 VKAVWEELGVGSGGSLDRQELSLVCDHIGLKNLQSEELDALFKKLDKDQDGKVSLTEFQKGLFRHGDLPEPTAASTPLRASTQRTFSQALEERVGRSTSPSLLSATVGQRLLTRLDDG-SGCTSPERVVTLWNDEGIRNSRDILQTLDFSLEERLSLAELTLALDNELLV-SGNGIHQAALISYKDEIQFLQ 400
[Close]
BLAST of Ninein-like protein vs. Planmine SMEST
Match: SMESG000041298.1 (SMESG000041298.1)

HSP 1 Score: 658.292 bits (1697), Expect = 0.000e+0
Identity = 363/365 (99.45%), Postives = 364/365 (99.73%), Query Frame = 2 
Query:  188 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHXXXXXXXXXXXXXXXXXXXIKIPPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 1282
            MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKI PNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLSGSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINE+LDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK
Sbjct:    1 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKIAPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLSGSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINENLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 365

HSP 2 Score: 196.823 bits (499), Expect = 7.594e-52
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 2 
Query: 1337 SLNAKIEIAINRERQYQIKLHEMEVTAKDFRVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE 1744
            SLNAKIEIAINRERQYQIKL EMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE
Sbjct:  481 SLNAKIEIAINRERQYQIKLREMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE 616
[Close]
BLAST of Ninein-like protein vs. Planmine SMEST
Match: SMESG000041298.1 (SMESG000041298.1)

HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0
Identity = 363/365 (99.45%), Postives = 364/365 (99.73%), Query Frame = 2 
Query:  188 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHXXXXXXXXXXXXXXXXXXXIKIPPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 1282
            MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKI PNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLSGSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINE+LDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK
Sbjct:    1 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKIAPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLSGSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINENLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 365

HSP 2 Score: 196.052 bits (497), Expect = 1.005e-52
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 2 
Query: 1337 SLNAKIEIAINRERQYQIKLHEMEVTAKDFRVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE 1744
            SLNAKIEIAINRERQYQIKL EMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE
Sbjct:  481 SLNAKIEIAINRERQYQIKLREMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE 616
[Close]
BLAST of Ninein-like protein vs. Planmine SMEST
Match: SMESG000041298.1 (SMESG000041298.1)

HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0
Identity = 350/365 (95.89%), Postives = 352/365 (96.44%), Query Frame = 2 
Query:  188 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHXXXXXXXXXXXXXXXXXXXIKIPPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 1282
            MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKI PNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIE     NL+ S  S    FTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINE+LDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK
Sbjct:    1 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKIAPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIEKISNLNLSGSSISGL--FTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINENLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 363

HSP 2 Score: 196.438 bits (498), Expect = 8.163e-52
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 2 
Query: 1337 SLNAKIEIAINRERQYQIKLHEMEVTAKDFRVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE 1744
            SLNAKIEIAINRERQYQIKL EMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE
Sbjct:  479 SLNAKIEIAINRERQYQIKLREMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEKENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQLESSIMEIQSKSSIIRKLE 614
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BLAST of Ninein-like protein vs. Planmine SMEST
Match: SMESG000041298.1 (SMESG000041298.1)

HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0
Identity = 363/365 (99.45%), Postives = 364/365 (99.73%), Query Frame = 2 
Query:  188 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHXXXXXXXXXXXXXXXXXXXIKIPPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYXXXXXXXXXXXXXXXXXXXXXFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINESLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 1282
            MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKI PNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLSGSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINE+LDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK
Sbjct:    1 MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINKPSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKIAPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLGMNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLSGSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEPVNLNALSKALEQEIINENLDAITLAAIITYQKELYYFRNQQIENPGASLTAHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINRHQIEELDAVAELHRK 365
The following BLAST results are available for this feature:
BLAST of Ninein-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
NINL1.495e-1930.81ninein like [Source:HGNC Symbol;Acc:HGNC:29163][more]
NINL1.760e-1930.81ninein like [Source:HGNC Symbol;Acc:HGNC:29163][more]
NIN8.821e-921.88ninein [Source:HGNC Symbol;Acc:HGNC:14906][more]
NIN8.821e-921.88ninein [Source:HGNC Symbol;Acc:HGNC:14906][more]
NIN1.201e-821.88ninein [Source:HGNC Symbol;Acc:HGNC:14906][more]
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BLAST of Ninein-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ninein-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ninein-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ninl5.158e-1429.90ninein-like [Source:ZFIN;Acc:ZDB-GENE-130530-768][more]
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BLAST of Ninein-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
saraf1.351e-1832.09store-operated calcium entry-associated regulatory... [more]
saraf1.781e-1832.09store-operated calcium entry-associated regulatory... [more]
saraf1.852e-1832.09store-operated calcium entry-associated regulatory... [more]
saraf1.866e-1832.09store-operated calcium entry-associated regulatory... [more]
saraf2.737e-1832.09store-operated calcium entry-associated regulatory... [more]
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BLAST of Ninein-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ninl7.317e-2232.69ninein-like [Source:MGI Symbol;Acc:MGI:1925427][more]
Nin4.534e-921.88ninein [Source:MGI Symbol;Acc:MGI:105108][more]
Nin4.927e-921.88ninein [Source:MGI Symbol;Acc:MGI:105108][more]
Nin5.058e-921.88ninein [Source:MGI Symbol;Acc:MGI:105108][more]
Nin5.058e-921.88ninein [Source:MGI Symbol;Acc:MGI:105108][more]
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BLAST of Ninein-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q6ZQ12|NINL_MOUSE5.118e-2132.69Ninein-like protein OS=Mus musculus OX=10090 GN=Ni... [more]
sp|Q9Y2I6|NINL_HUMAN8.451e-1930.81Ninein-like protein OS=Homo sapiens OX=9606 GN=NIN... [more]
sp|Q61043|NIN_MOUSE3.538e-821.88Ninein OS=Mus musculus OX=10090 GN=Nin PE=1 SV=4[more]
sp|Q8N4C6|NIN_HUMAN5.767e-821.88Ninein OS=Homo sapiens OX=9606 GN=NIN PE=1 SV=4[more]
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BLAST of Ninein-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
R7V1Z03.184e-2334.87Uncharacterized protein OS=Capitella teleta OX=283... [more]
S9WEH86.870e-2033.65Ninein-like protein OS=Camelus ferus OX=419612 GN=... [more]
A0A1U8C4V01.432e-1934.45ninein-like protein OS=Mesocricetus auratus OX=100... [more]
D4A5N12.936e-1933.49Ninein-like OS=Rattus norvegicus OX=10116 GN=Ninl ... [more]
A0A2K6FML07.509e-1831.75Ninein like OS=Propithecus coquereli OX=379532 GN=... [more]
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BLAST of Ninein-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ninl2.376e-1529.17ninein like [Source:NCBI gene;Acc:103026678][more]
ninl2.665e-1529.17ninein like [Source:NCBI gene;Acc:103026678][more]
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BLAST of Ninein-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ninein-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ninein-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ninein-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ninein-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000041298.17.594e-5299.45SMESG000041298.1[more]
SMESG000041298.11.005e-5299.45SMESG000041298.1[more]
SMESG000041298.18.163e-5295.89SMESG000041298.1[more]
SMESG000041298.10.000e+099.45SMESG000041298.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30034020 ID=SMED30034020|Name=Ninein-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3084bp
GAATTTACACTCTAATTGCGCACACAAACTCGGGATTGTGAATTTACACA
CTAATTGTACACACAAACTCGGGATTGTGTATTTGCATACAATTCCTATT
TACAATTCCAAACAATCAATCAAAACAATACGTGAGTAATTCTTTTTTTA
TCGATCAAAATGTCTTCAGTTTTTTTTAATTAAATAAATGGACGCACTGA
ATAAATTTTTGGAAAATCTCAAACCTGGCGGAGCTAGCAACTTACCGAAA
AGTAAATTTGAACAGACATTAACCGATGACTCGGAAGTCGATTCTCCTGA
ACCTCAAGAACCAACAATCAAAACAGACATCAATAAACCATCAAATGAAA
TAGAATTAAAAAAAGAAGTGCCTCCAAAACCCAGAAAGGGATTAGTTAAA
CAACTTGCTGACGTTCATCACGAATCATTAGAAATTGAAGAAAATAGTAA
TAATAATAATTCAAAGCCAGTAGAAGAGATTAAGATTCCTCCAAATCCTT
TACCAAGAAAAAAGAAAATTCCAAAAATTAATGAACCGGAAAATGAAAGT
GTTGAAAAATTATGGCAAGATCTAAATGTTGGTAAAAACGGATTTCTAAC
AGTTACTGAGTTGGAAAAAGTCTGCAACTACCTAGGAATGAATACTCCGG
ATCAAAAAAGTCTGAAATCCCTTTTCAGCGTAATCGACACCGATTCCGAC
GGGCGCGTATCCTTAGTTGAGTTTGCCGCCGGACTTAAAAAATATGGAAA
TATTGAAAATTCAGAAATATCGAATTTAAATCTGTCTGGGAGCAGCATAA
GTGGTCTTTTCACCTGTATTGATCCTAATAGACAAGGATTTTGTGAGGCA
CAAAAGGTTGTGGAATTGTGGGCTTCTGGTGGAATTTTGAATGGAAATGA
AGTTCTTGACTATTTGGAGTTTACGATAAATGAGCCGGTTAATCTAAACG
CTTTATCTAAAGCTTTGGAACAAGAAATAATAAATGAAAGTTTAGACGCA
ATTACTCTTGCAGCAATCATAACTTATCAGAAGGAGCTTTATTACTTCAG
AAATCAGCAAATTGAAAATCCAGGCGCTTCATTAACGGCCCATCAACAGG
CAGTACACGAGACGTTGTTACTGAAAAGTGGGGAACTTCAAAACAATTTA
GATAAGTTGACTGAAGAACTCTCATATATTGCACATGAAAATGAGAGTCT
TAAAGGACATGTTAAAGAATTAGAAGAAATTAATAGGCATCAGATTGAAG
AACTTGATGCTGTAGCAGAACTTCACCGAAAAGCATTGATGAAAAATTTA
CAATTAGAAAACAACAATTTAAAACAAAAAATCAAAAGTTTGAACGCGAA
AATAGAAATCGCCATCAACAGGGAAAGACAATATCAAATCAAACTCCATG
AAATGGAAGTTACAGCAAAAGATTTTAGAGTAACAGAAGAAAATCTAAAC
AAGAATTTAAATGAATTATCAAAAGAAAATAATGAAAAGAAAAAAAAAAT
TAATTTTTTTTCAGAAAAAATAGATGACCTTGAAAAAGAAAACACTTTTC
TTTTAAAATCTATTCAAAGTTTAGAAGAGGAGCGAGAAAATGAAAAAAGG
GATTTTTTTTTTGAAAAAGAAAATCTTAGAAAAAGTTGTCATTCATTAGG
AAGTCAATTGAGTAAATCCCATCTGATGCAAACCCAGTTGGAATCCAGCA
TTATGGAAATCCAATCTAAAAGTTCCATAATCAGGAAACTAGAGGTATCA
ACAAATATTTCTTCAGCACATTTTTTTGTTATTTTTAACACAAGGAATGA
ATTCACATAATAGTTTTCCTTGGCGGTATCCAAATTTTATTTTTCGTAGT
GATACGGTTTAATTTGTTATTACAGTAAATTCCCGATTATCCGGACTGAC
CGGGAAAATAAAAAATAAAAAAATAGTTATGATAAACAATTGTTAACAAA
ATAAATATTAAAATATAAATATTTTTTTAAATTAAATATTCGGTAATTTT
TGTTTGTCTACTCGAACTTTAAACTGTAAATGAGTTATTAAATTTTCTAC
AATTTTTAAAAATTTGCCTGGTCAAACCGAATTCCGGATAAACGGGTTTC
AACTGTATTGTGTTTAAATAGTTTTAAAAAGCGAATTTAGCACTTTTAAT
AAAATTTATGCTTAACAAGTTATATATTTTCTGACTATAAAAAATAACTG
TAATGTACTAGGGCAGGGGTCGGGAACCTGTGGCTAGCGAGCCGCATGCG
GCTCTTTGAACTTTATCATGTGACTCTTGGGTATTTTGTCTAAATAATTT
CATCATGTGGCTATAGGTTCAGTTAAAAATGTTCACATTCAATTTGAGTT
TTAATAAAATGTGAGTCACAGTCATGCTTAAATTTGAAAACTGATTATTT
TCCAAATATTAACCAACTTTGTAAGGAAATATAACAACAGAAATCTTATT
AAATTTCTTTTTCTTATTTTTGTGTTATATTTATCTGAATTTTTAAATGC
TAAATTGTATTAATTAATGTGTAATCAACAGCAATTTATGTTTTTGTTTG
TTATATTATTTAATTTACACTGTATGCACATTGAATGAGATTTATTCCAT
GGTATTTTTTCATGTGACTCTTTAATTTTTTAACTGGATAAAAATTTAAT
ATTTGGCTCCTTGCAATGAAAAGGTTCCTGACTCTTGTACTAGGGCATGT
CTAATGAAACTTGAAGTCAAAATATATGAGAAGTCAGTGACCGGCTCTTA
AGTCATCGGTATAATTTATTTTTAAGTCAAATTCCTTACTTCCTTACTTT
CCCAATTTGTTAACATACTAAAGAGCATTAGCATTTTCATCGGTCAAAGC
CAAGTTCATATTGTGACATGACTCAGTAGCTGTTTATTTTCTGACACTGT
TGATGTTATTGTTTGTTCTTCCAGATTCCAAGTGATTATGTAACCCTAAA
AATTACAAAATCAAACAGCGTCAAATTTTGAAATGTGTTATTATTACGAA
TAATAAAAAAAGGCACGCGTAATTCCAATTATAAGATTAACATACAAACA
AGTAATAAAATATACCTGTCGCAAAGCCAATACT
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protein sequence of SMED30034020-orf-1

>SMED30034020-orf-1 ID=SMED30034020-orf-1|Name=SMED30034020-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=541bp
MDALNKFLENLKPGGASNLPKSKFEQTLTDDSEVDSPEPQEPTIKTDINK
PSNEIELKKEVPPKPRKGLVKQLADVHHESLEIEENSNNNNSKPVEEIKI
PPNPLPRKKKIPKINEPENESVEKLWQDLNVGKNGFLTVTELEKVCNYLG
MNTPDQKSLKSLFSVIDTDSDGRVSLVEFAAGLKKYGNIENSEISNLNLS
GSSISGLFTCIDPNRQGFCEAQKVVELWASGGILNGNEVLDYLEFTINEP
VNLNALSKALEQEIINESLDAITLAAIITYQKELYYFRNQQIENPGASLT
AHQQAVHETLLLKSGELQNNLDKLTEELSYIAHENESLKGHVKELEEINR
HQIEELDAVAELHRKALMKNLQLENNNLKQKIKSLNAKIEIAINRERQYQ
IKLHEMEVTAKDFRVTEENLNKNLNELSKENNEKKKKINFFSEKIDDLEK
ENTFLLKSIQSLEEERENEKRDFFFEKENLRKSCHSLGSQLSKSHLMQTQ
LESSIMEIQSKSSIIRKLEVSTNISSAHFFVIFNTRNEFT*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0003117parapharyngeal cell
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
Vocabulary: molecular function
TermDefinition
GO:0005509calcium ion binding
GO:0046872metal ion binding
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
GO:0005815microtubule organizing center
GO:0005829cytosol
GO:0005856cytoskeleton
GO:0005874microtubule
GO:0045171intercellular bridge
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 307..327
NoneNo IPR availableCOILSCoilCoilcoord: 410..479
NoneNo IPR availableCOILSCoilCoilcoord: 368..402
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 108..247
e-value: 4.8E-13
score: 51.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..67
NoneNo IPR availablePANTHERPTHR18905NINEINcoord: 106..388
NoneNo IPR availablePANTHERPTHR18905:SF12NINEIN-LIKE PROTEINcoord: 106..388
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 123..181
e-value: 1.6E-7
score: 31.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 117..152
score: 9.269
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 154..189
score: 11.808
IPR002048EF-hand domainCDDcd00051EFhcoord: 133..184
e-value: 4.99096E-7
score: 44.8461
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 167..179
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 114..246