Pancreas transcription factor 1 subunit alpha

Overview
NamePancreas transcription factor 1 subunit alpha
Smed IDSMED30034009
Length (bp)615
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Pancreas transcription factor 1 subunit alpha (SMED30034009) t-SNE clustered cells

Violin plots show distribution of expression levels for Pancreas transcription factor 1 subunit alpha (SMED30034009) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Pancreas transcription factor 1 subunit alpha (SMED30034009) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Pancreas transcription factor 1 subunit alpha (SMED30034009) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30034009

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parapharyngeal regionSMED30034009h1SMcG0001162 SmedASXL_008753SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
X1 cellSMED30034009h1SMcG0001162 SmedASXL_005122SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
parenchymaSMED30034009h1SMcG0001162 dd_Smed_v4_17397_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30034009h1SMcG0001162 dd_Smed_v4_6352_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30034009h1SMcG0001162 dd_Smed_v6_17397_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
progenitor cellSMED30034009h1SMcG0001162 KF487101smed_ncbi_20240424PMID:24173799
Cowles et al., 2013		whole organism asexual adult colorimetric in situ hybridization evidence
stem cellSMED30034009h1SMcG0001162 KF487101smed_ncbi_20240424PMID:24173799
Cowles et al., 2013		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30034009h1SMcG0001162 KF487101smed_ncbi_20240424PMID:24173799
Cowles et al., 2013		whole organism asexual adult colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Human
Match: PTF1A (pancreas associated transcription factor 1a [Source:HGNC Symbol;Acc:HGNC:23734])

HSP 1 Score: 105.531 bits (262), Expect = 8.786e-27
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            +L + RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  160 ELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 222
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Human
Match: FERD3L (Fer3 like bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:16660])

HSP 1 Score: 75.0998 bits (183), Expect = 1.649e-16
Identity = 34/63 (53.97%), Postives = 52/63 (82.54%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEE 350
            QRQAAN+RERKRM ++N+AF++LR  +PT  YEKRLS+++TLR+AI YI+F+  +++  + +E
Sbjct:  102 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKE 164
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Human
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428])

HSP 1 Score: 67.781 bits (164), Expect = 4.095e-14
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ 341
            E+L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+
Sbjct:   37 EELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDE 100
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Human
Match: TCF15 (transcription factor 15 [Source:HGNC Symbol;Acc:HGNC:11627])

HSP 1 Score: 67.781 bits (164), Expect = 1.407e-13
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIM----QVDQGEEIYEKTFIA 374
            QRQAAN RER R QS+N AF  LR  IPT P +++LSK++T+R+A  YI  L  ++      D G+  +     A
Sbjct:   73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLLLGDSADDGQPCFRAAGSA 147
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Human
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428])

HSP 1 Score: 67.781 bits (164), Expect = 1.555e-13
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ 341
            E+L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+
Sbjct:  104 EELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDE 167
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Celegans
Match: hlh-13 (Helix-loop-helix protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q20561])

HSP 1 Score: 80.8777 bits (198), Expect = 2.123e-19
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 3 
Query:  117 DSRFSRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQV--DQGEEIYEKTFIA 374
            DS +    C E    +RQ A++RERKRM SIN AF +LR +IPT PYEKRLSK+DTL +AI YIN L  +++   D G+ I +   +A
Sbjct:   29 DSSYDSYYCEEP--EERQTASIRERKRMCSINVAFIELRNYIPTFPYEKRLSKIDTLNLAIAYINMLDDVLRTPEDSGQYIQKCVHMA 114
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Celegans
Match: hlh-15 (Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:Q18590])

HSP 1 Score: 60.4622 bits (145), Expect = 3.546e-12
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 3 
Query:  183 RERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQ 332
            RER R++S N AF +LR  +PT+P EK+LSK++ LR +I YI+FL  ++Q
Sbjct:   40 RERIRVESFNMAFSQLRALLPTLPVEKKLSKIEILRFSIAYISFLDNLLQ 89
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Celegans
Match: ngn-1 (NeuroGeNin [Source:UniProtKB/TrEMBL;Acc:Q95XG7])

HSP 1 Score: 58.9214 bits (141), Expect = 7.978e-11
Identity = 45/135 (33.33%), Postives = 62/135 (45.93%), Query Frame = 3 
Query:  105 RKNSDSRFSRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFL-----GGIMQVDQGEEIYEKTFIANDQ------FQTESNLKSSHLPYSFANSESNYIDYYGWAH 476
            RK S +   R+K       +R  AN RER+RM S+NDA E LR  +P +P E +++K++TLR A  YI  L     GG     Q  E       +  Q      FQ+    +    P S++N  S    YY   H
Sbjct:   49 RKRSPATIERAK-----TVRRDKANARERRRMNSLNDALEHLRGILPALPDEPKMTKIETLRKAQEYIASLSFQLSGGSPDSSQCCETGSCGLCSASQSLQSTPFQSPCFPQPLQYPSSYSNPPSQM--YYHHHH 176
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Celegans
Match: hlh-8 (Twist-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q11094])

HSP 1 Score: 58.151 bits (139), Expect = 1.478e-10
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 3 
Query:  156 ARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFL 317
             +QR  AN RER+R + +NDAF  LR  IP+MP +K +SK+ TLR+A  YI+FL
Sbjct:   19 VQQRACANRRERQRTKELNDAFTLLRKLIPSMPSDK-MSKIHTLRIATDYISFL 71
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Celegans
Match: hlh-6 (Helix-loop-helix protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q10007])

HSP 1 Score: 59.3066 bits (142), Expect = 1.651e-10
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 3 
Query:  177 NMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTES 398
            N RER R++++ND +E+LR H+P    EKR+SKVDTLR+AI YI  L  +++     E+++      + FQ ES
Sbjct:  179 NERERCRVRNVNDGYERLRKHLPVHFDEKRISKVDTLRLAIRYIKHLDNLLR----SELHQYNCKCFNGFQEES 248
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Fly
Match: Fer1 (gene:FBgn0037475 transcript:FBtr0081567)

HSP 1 Score: 105.916 bits (263), Expect = 8.341e-28
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 3 
Query:  132 RSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ 341
            R KC  ++A+QRQAAN+RER+RMQSIN+AFE LR HIPT+PYEKRLSKVDTL++AI YI FL  +++ D+
Sbjct:   72 RLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDK 141
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Fly
Match: Fer1 (gene:FBgn0037475 transcript:FBtr0334670)

HSP 1 Score: 105.916 bits (263), Expect = 9.775e-28
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 3 
Query:  132 RSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ 341
            R KC  ++A+QRQAAN+RER+RMQSIN+AFE LR HIPT+PYEKRLSKVDTL++AI YI FL  +++ D+
Sbjct:   77 RLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDK 146
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0301709)

HSP 1 Score: 91.2781 bits (225), Expect = 4.585e-22
Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQS-INDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHL 419
            QRQAAN+RERKR+QS IN AF++LRVH+PT PYEKRLSK+DTLR+AI YI+ L  ++Q D     Y +  +  +     +N  +S L
Sbjct:  148 QRQAANVRERKRIQSSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDYDPLTYVEKCLRGEIKADRANWNTSDL 234
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0344012)

HSP 1 Score: 90.8929 bits (224), Expect = 5.727e-22
Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQS-INDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIY-EKTF---IANDQFQTESNLKS 410
            QRQAAN+RERKR+QS IN AF++LRVH+PT PYEKRLSK+DTLR+AI YI+ L  ++Q D     Y EK     I  D+    +NL +
Sbjct:  148 QRQAANVRERKRIQSSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDYDPLTYVEKCLRGEIKADRANWNTNLTA 235
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0344010)

HSP 1 Score: 88.9669 bits (219), Expect = 2.890e-21
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQ------SINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHL 419
            QRQAAN+RERKR+Q      SIN AF++LRVH+PT PYEKRLSK+DTLR+AI YI+ L  ++Q D     Y +  +  +     +N  +S L
Sbjct:  148 QRQAANVRERKRIQRSAPTGSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDYDPLTYVEKCLRGEIKADRANWNTSDL 239
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Zebrafish
Match: ptf1a (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:368662])

HSP 1 Score: 103.219 bits (256), Expect = 1.302e-26
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 3 
Query:  165 RQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  117 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQSD 174
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Zebrafish
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410])

HSP 1 Score: 88.9669 bits (219), Expect = 4.513e-22
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIM 329
            QR AAN+RERKRM SIN AFE+LR H+PT PYEKRLSK+DTLR+AI YI  L  I+
Sbjct:   66 QRHAANIRERKRMLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLREIL 121
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Zebrafish
Match: ferd3l (Fer3-like bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-081104-461])

HSP 1 Score: 78.9518 bits (193), Expect = 4.104e-19
Identity = 35/57 (61.40%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQ 332
            QRQAAN+RERKRM S+N+AF++LR  +PT  YEKRLS+++TLR+AI YI F+  I++
Sbjct:   25 QRQAANIRERKRMFSLNEAFDRLRRRVPTFAYEKRLSRIETLRLAIVYIAFMTDILE 81
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Zebrafish
Match: tcf15 (transcription factor 15 [Source:ZFIN;Acc:ZDB-GENE-980605-20])

HSP 1 Score: 73.1738 bits (178), Expect = 7.691e-16
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:  153 LARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFA 434
            + +QR AAN RER R QS+N AF  LR  IPT P +++LSK++TLR+A  YI+ L  ++ +  G E  +    A    Q +S  K      +F 
Sbjct:   62 IVKQRNAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYISHLANVLLIGDGGEDAQPCVSAVYSAQGDSGGKQPRTICTFC 155
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Zebrafish
Match: si:ch211-246m6.4 (si:ch211-246m6.4 [Source:ZFIN;Acc:ZDB-GENE-050208-498])

HSP 1 Score: 73.1738 bits (178), Expect = 7.729e-16
Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 3 
Query:  153 LARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKS 410
            +++QRQAAN RER R  S+N AF  LR  IPT P +++LSK++TLR+A  YI+ L  ++ + +     +     ++  Q+ +NLKS
Sbjct:   81 VSKQRQAANARERDRTHSVNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVLLLGEDCRDGQPCLKYHNILQSNANLKS 166
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Xenopus
Match: PTF1A (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:100494161])

HSP 1 Score: 102.834 bits (255), Expect = 7.199e-26
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 3 
Query:  165 RQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  171 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQSD 228
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Xenopus
Match: ENSXETT00000031930.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:9:55646956:55647657:1 gene:ENSXETG00000008961.1 transcript:ENSXETT00000031930.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 86.6557 bits (213), Expect = 5.254e-21
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFI 371
             RQAAN+RER+RM SIN AFE+LR  +PT PYEKRLSK+DTLR+AI YI  L  I+      + Y + F+
Sbjct:   84 HRQAANIRERRRMLSINSAFEELRGRVPTFPYEKRLSKIDTLRLAIAYIALLSDILSSGMDPKTYVEEFV 153
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Xenopus
Match: tcf15 (transcription factor 15 [Source:NCBI gene;Acc:549260])

HSP 1 Score: 74.3294 bits (181), Expect = 2.149e-16
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTF 368
            + + +QRQAAN RER R QS+N AF  LR  IPT P +++LSK++TLR+A  YI+ L  ++ + +G +  +  F
Sbjct:   58 QPVVKQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYISHLANVLLLGEGCQDGQPCF 131
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Xenopus
Match: ferd3l (Fer3-like bHLH transcription factor [Source:NCBI gene;Acc:100124312])

HSP 1 Score: 73.1738 bits (178), Expect = 2.441e-16
Identity = 33/57 (57.89%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQ 332
            QRQAAN+RERKRM ++N+AF+ LR  +PT  YEKRLS+++TLR+AI YI+F+  +++
Sbjct:   66 QRQAANIRERKRMFNLNEAFDLLRKKVPTFAYEKRLSRIETLRLAIVYISFMTEMLK 122
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Xenopus
Match: hnrnpc (heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:Xenbase;Acc:XB-GENE-489141])

HSP 1 Score: 74.3294 bits (181), Expect = 3.913e-16
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTF 368
            + + +QRQAAN RER R QS+N AF  LR  IPT P +++LSK++TLR+A  YI+ L  ++ + +G +  +  F
Sbjct:   58 QPVVKQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYISHLANVLLLGEGCQDGQPCF 131
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Mouse
Match: Ptf1a (pancreas specific transcription factor, 1a [Source:MGI Symbol;Acc:MGI:1328312])

HSP 1 Score: 105.531 bits (262), Expect = 6.615e-27
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            +L + RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  157 ELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 219
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Mouse
Match: Ferd3l (Fer3 like bHLH transcription factor [Source:MGI Symbol;Acc:MGI:2150010])

HSP 1 Score: 76.2554 bits (186), Expect = 3.427e-17
Identity = 35/63 (55.56%), Postives = 52/63 (82.54%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEE 350
            QRQAAN+RERKRM ++N+AF++LR  +PT  YEKRLS+++TLR+AI YI+F+  ++Q  + +E
Sbjct:  104 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLQSKEEKE 166
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Mouse
Match: Tcf15 (transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664])

HSP 1 Score: 76.6406 bits (187), Expect = 4.240e-17
Identity = 41/115 (35.65%), Postives = 57/115 (49.57%), Query Frame = 3 
Query:   93 KNFPRKNSDSRFSRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFAN 437
            +  P   S  R S    P  + RQRQAAN RER R QS+N AF  LR  IPT P +++LSK++TLR+A  YI  L  ++ +    +  +  F A    ++         P S   
Sbjct:   48 RRGPGPGSGRRASNGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDAADDGQPCFRAAGGGKSAVPAADGRQPRSICT 162
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Mouse
Match: Twist2 (twist basic helix-loop-helix transcription factor 2 [Source:MGI Symbol;Acc:MGI:104685])

HSP 1 Score: 66.6254 bits (161), Expect = 1.169e-13
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ 341
            E+L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+
Sbjct:   62 EELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDE 125
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Mouse
Match: Twist2 (twist basic helix-loop-helix transcription factor 2 [Source:MGI Symbol;Acc:MGI:104685])

HSP 1 Score: 66.6254 bits (161), Expect = 1.169e-13
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ 341
            E+L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+
Sbjct:   62 EELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDE 125
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. UniProt/SwissProt
Match: sp|Q7RTS3|PTF1A_HUMAN (Pancreas transcription factor 1 subunit alpha OS=Homo sapiens OX=9606 GN=PTF1A PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.219e-26
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            +L + RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  160 ELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 222
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. UniProt/SwissProt
Match: sp|Q9QX98|PTF1A_MOUSE (Pancreas transcription factor 1 subunit alpha OS=Mus musculus OX=10090 GN=Ptf1a PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.627e-26
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            +L + RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  157 ELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 219
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. UniProt/SwissProt
Match: sp|Q64305|PTF1A_RAT (Pancreas transcription factor 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Ptf1a PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.032e-26
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            +L + RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  159 ELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 221
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. UniProt/SwissProt
Match: sp|Q7ZSX3|PTF1A_DANRE (Pancreas transcription factor 1 subunit alpha OS=Danio rerio OX=7955 GN=ptf1a PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.829e-26
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 3 
Query:  165 RQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  117 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQSD 174
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. UniProt/SwissProt
Match: sp|Q4ZHW1|PTF1A_XENLA (Pancreas transcription factor 1 subunit alpha OS=Xenopus laevis OX=8355 GN=ptf1a PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.705e-25
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 3 
Query:  165 RQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  121 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSEMVQSD 178
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. TrEMBL
Match: U5YR63 (Ptf-1 protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=ptf-1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.582e-57
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 3 
Query:  171 AANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFA 434
            AANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYS A
Sbjct:    1 AANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSLA 88
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. TrEMBL
Match: A0A194PER3 (Pancreas transcription factor 1 subunit alpha OS=Papilio xuthus OX=66420 GN=RR46_08277 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.870e-28
Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 3 
Query:  102 PRKNSDSRF---SRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD--------------QGEEIYEKTFIANDQFQTES 398
            PRK SD R     RS+CP++  +QRQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTL++AIGYI+FLG +++ D              Q +E  +K  I    FQ  S
Sbjct:   17 PRKRSDCRRLHKRRSRCPQQQMQQRQAANLRERRRMQSINDAFEGLRAHIPTLPYEKRLSKVDTLKLAIGYISFLGELVRTDRSISDTMLSGVGNVQNKEEQKKVIIRGSNFQAHS 132
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. TrEMBL
Match: A0A194QVL7 (Pancreas transcription factor 1 subunit alpha OS=Papilio machaon OX=76193 GN=RR48_15151 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.260e-27
Identity = 59/101 (58.42%), Postives = 76/101 (75.25%), Query Frame = 3 
Query:  102 PRKNSDSRF---SRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTE 395
            PRK SD R     RS+CP++  +QRQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTL++AIGYI+FLG +++ D+       + + N Q + E
Sbjct:   56 PRKRSDCRRLHKRRSRCPQQQMQQRQAANLRERRRMQSINDAFEGLRAHIPTLPYEKRLSKVDTLKLAIGYISFLGELVRTDRSISDTMLSGVGNVQNKEE 156
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. TrEMBL
Match: A0A1D2MGL8 (Pancreas transcription factor 1 subunit alpha OS=Orchesella cincta OX=48709 GN=Ocin01_14548 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.517e-27
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 3 
Query:  141 CPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEE 350
            CP++  +QRQAANMRERKRMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  +++ D+G E
Sbjct:   64 CPQQQIQQRQAANMRERKRMQSINDAFEGLRAHIPTLPYEKRLSKVDTLRLAIGYINFLSEVVKTDRGAE 133
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. TrEMBL
Match: A0A3S2N3E9 (BHLH domain-containing protein (Fragment) OS=Chilo suppressalis OX=168631 GN=evm_014892 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.212e-27
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 3 
Query:  102 PRKNSDSRF---SRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQG 344
            P + SD R     RS+CP++  +QRQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTL++AIGYI+FLG +++ D+G
Sbjct:   66 PVRQSDCRRLHKRRSRCPQQQIQQRQAANLRERRRMQSINDAFEGLRAHIPTLPYEKRLSKVDTLKLAIGYISFLGELVRTDRG 149
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Cavefish
Match: ptf1a (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:103046795])

HSP 1 Score: 104.375 bits (259), Expect = 3.234e-27
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 3 
Query:  165 RQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:   94 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQSD 151
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Cavefish
Match: si:dkey-34f9.3 (neurogenic differentiation factor 1-like [Source:NCBI gene;Acc:107197807])

HSP 1 Score: 88.1965 bits (217), Expect = 2.343e-21
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIM 329
            QR AAN+RERKRM SIN AFE+LR H+PT PYEKRLSK+DTLR+AI YI  L  I+
Sbjct:  121 QRHAANIRERKRMLSINSAFEQLRCHVPTFPYEKRLSKIDTLRLAIAYIALLREIL 176
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Cavefish
Match: ferd3l (Fer3-like bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-081104-461])

HSP 1 Score: 76.6406 bits (187), Expect = 1.687e-18
Identity = 34/52 (65.38%), Postives = 46/52 (88.46%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFL 317
            QRQAAN+RERKRM S+N+AF++LR  +PT  YEKRLS+++TLR+AI YI+F+
Sbjct:   16 QRQAANIRERKRMFSLNEAFDELRKKVPTFAYEKRLSRIETLRLAIVYISFM 67
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Cavefish
Match: scxa (scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414])

HSP 1 Score: 73.1738 bits (178), Expect = 7.621e-16
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 3 
Query:  156 ARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQG 344
             RQR AAN RER R  S+N AF  LR  IPT P +++LSK++TLR+A  YI+ LG ++ V +G
Sbjct:   77 GRQRNAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLVGEG 139
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Cavefish
Match: twist1a (twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6])

HSP 1 Score: 70.4774 bits (171), Expect = 3.178e-15
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 3 
Query:  123 RFSRSKCP---EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQ-GEEIYEKTFIANDQF 386
            R  RS  P   E+L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+   ++   +++A+++ 
Sbjct:   51 RGKRSSSPQSFEELQTQRVMANVRERQRTQSLNEAFASLRKIIPTLPSDK-LSKIQTLKLAARYIDFLCQVLQSDELDSKVASCSYVAHERL 141
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004072.1 (pep scaffold:Pmarinus_7.0:GL492732:1750:4325:-1 gene:ENSPMAG00000003727.1 transcript:ENSPMAT00000004072.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 97.8265 bits (242), Expect = 2.463e-25
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 3 
Query:  153 LARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQ 332
            ++  RQAAN RER+RMQSIN AFE LR HIPT+PYEKRLSKVDTLR+AIGYI+FLG ++ 
Sbjct:  129 MSHLRQAANQRERRRMQSINAAFEGLRAHIPTLPYEKRLSKVDTLRLAIGYISFLGELVH 188
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Sea Lamprey
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410])

HSP 1 Score: 91.2781 bits (225), Expect = 3.779e-24
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIY 356
            QR AAN+RER+RM SIN AFE+LR H+PT PYEKRLSK+DTLR+AI YI  L  I+  D   + Y
Sbjct:   34 QRTAANVRERRRMLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLRDILLSDTDPKAY 98
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Sea Lamprey
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428])

HSP 1 Score: 67.3958 bits (163), Expect = 3.253e-15
Identity = 35/81 (43.21%), Postives = 57/81 (70.37%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGE-EIYEKTFIANDQF 386
            E L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+ + ++   +++A+++ 
Sbjct:    4 EDLQNQRVLANVRERQRTQSLNEAFASLRKIIPTLPSDK-LSKIQTLKLASRYIDFLYQVLQSDEMDNKMTSCSYVAHERL 83
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Sea Lamprey
Match: scxa (scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414])

HSP 1 Score: 65.4698 bits (158), Expect = 4.020e-14
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIM 329
            QR+AAN RER R QS+N AF  LR  IPT P +++LSK++TL +A  YI  LG  +
Sbjct:   37 QRRAANARERDRTQSVNSAFTALRTLIPTEPADRKLSKLETLLLASSYIAHLGNTL 92
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Sea Lamprey
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428])

HSP 1 Score: 63.1586 bits (152), Expect = 6.124e-13
Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFL 317
            E++ +QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL
Sbjct:   91 EEVQQQRFVANVRERQRTQSLNEAFASLRQIIPTLPSDK-LSKIQTLKLATRYIDFL 146
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Nematostella
Match: EDO43849 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXI0])

HSP 1 Score: 96.2857 bits (238), Expect = 1.097e-26
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFL 317
            QR AAN+RERKRMQSIN+AFE LR HIPT+PYEKRLSKVDTLR+AIGYI FL
Sbjct:    3 QRHAANLRERKRMQSINEAFEGLRKHIPTLPYEKRLSKVDTLRLAIGYIGFL 54
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Nematostella
Match: EDO42924 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZZ0])

HSP 1 Score: 67.781 bits (164), Expect = 1.224e-15
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 3 
Query:  159 RQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIM 329
            +QRQAAN RER R  S+N AF  LR+ IPT P +++LSK++TLR+A  YI  L  I+
Sbjct:    1 KQRQAANARERNRTHSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHLSTIL 57
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Nematostella
Match: EDO46240 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQW6])

HSP 1 Score: 70.4774 bits (171), Expect = 1.943e-15
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 3 
Query:  153 LARQRQAANMRERKRMQSINDAFEKLRVHIP--TMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTE 395
            L++QRQ AN RER RM+SI+DA   LR H+P   +  +K+LSK+ TLR+AI YI+ L  I+Q D G+ I     I+N Q   E
Sbjct:   35 LSKQRQTANARERNRMRSISDALLHLRYHLPQTVVAKDKKLSKIQTLRLAIRYISDLFEILQSDDGQGIN----ISNGQLCAE 113
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Nematostella
Match: TWIST (Predicted protein; Twist family bHLH transcription factor [Source:UniProtKB/TrEMBL;Acc:Q6S5G7])

HSP 1 Score: 63.1586 bits (152), Expect = 3.425e-13
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQG--EEIYEKTFIANDQF 386
            QR  AN+RER+R Q++N+AF KLR  IPT+P +K LSK+ TLR+A  YI+FL  ++  ++         +FIA+++ 
Sbjct:   37 QRAIANVRERQRTQALNEAFNKLRKIIPTLPSDK-LSKIQTLRLASRYIDFLCQVLGNNEKHPSSALSSSFIAHERL 112
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Nematostella
Match: EDO46194 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQN4])

HSP 1 Score: 64.3142 bits (155), Expect = 1.694e-12
Identity = 36/98 (36.73%), Postives = 55/98 (56.12%), Query Frame = 3 
Query:  165 RQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQ-VDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYI 455
            R   N +ER R QS+N AF ++R  +PT P +K+LSKV+ LR A+ YI FL G+++ +  GEEI  +       +     L+ S     +  SE N++
Sbjct:   52 RTVTNKKERWRQQSVNLAFAEIRKLLPTYPPDKKLSKVEILRTAVKYIQFLDGVLEGMGDGEEIRGRDVPGELPWMPNRTLRGSF----WGLSEYNHV 145
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Medaka
Match: ptf1a (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:101160350])

HSP 1 Score: 103.99 bits (258), Expect = 6.728e-27
Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            ++ + RQAAN+RER+RMQSINDAFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  ++Q D
Sbjct:  115 EMQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQSD 177
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Medaka
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410])

HSP 1 Score: 87.4261 bits (215), Expect = 3.101e-21
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEE-IYEKTFI 371
            QR AAN+RERKRM SIN AFE+LR H+PT PYEKRLSK+DTLR+AI YI  L  I+     E+ +++K  I
Sbjct:  125 QRHAANIRERKRMLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLREILLSGATEKMLFKKELI 195
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Medaka
Match: ferd3l (Fer3 like bHLH transcription factor [Source:NCBI gene;Acc:101167882])

HSP 1 Score: 77.0258 bits (188), Expect = 1.135e-18
Identity = 33/57 (57.89%), Postives = 49/57 (85.96%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQ 332
            QRQAAN+RER+RM S+N+AF++LR  +PT  YEKRLS+++TLR+AI YI+F+  +++
Sbjct:   15 QRQAANVRERRRMFSLNEAFDELRRKVPTFAYEKRLSRIETLRLAIVYISFMTDLLE 71
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Medaka
Match: scxb (scleraxis bHLH transcription factor [Source:NCBI gene;Acc:101167982])

HSP 1 Score: 72.4034 bits (176), Expect = 1.772e-15
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  144 PEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQG 344
            P    RQR AAN RER R  S+N AF  LR  IPT P +++LSK++TLR+A  YI+ LG ++ + +G
Sbjct:   91 PHVEVRQRTAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLLGEG 157
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Medaka
Match: twist2 (twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235])

HSP 1 Score: 68.9366 bits (167), Expect = 1.553e-14
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 3 
Query:   60 QKVLNRKSHLKKNFPRKNSDSR---FSRSKCP--------EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGE-EIYEKTFIANDQF 386
            QK   RK    K F   +S S      R+K P        E+L  QR  AN+RER+R QS+N+AF  LR  IPT+P +K LSK+ TL++A  YI+FL  ++Q D+ + ++   +++A+++ 
Sbjct:   29 QKRFARKRRHSKKFSEDSSGSSPGPVKRAKKPSPSSTQSYEELQNQRVLANVRERQRTQSLNEAFASLRKIIPTLPSDK-LSKIQTLKLASRYIDFLCQVLQSDEMDSKMSSCSYVAHERL 148
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Planmine SMEST
Match: SMESG000044960.1 (SMESG000044960.1)

HSP 1 Score: 372.474 bits (955), Expect = 1.934e-133
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 3 
Query:   75 RKSHLKKNFPRKNSDSRFSRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYIDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLSC 605
            +KSHLKKNFPRKNSDSRFSRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYIDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLSC
Sbjct:   18 KKSHLKKNFPRKNSDSRFSRSKCPEKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYIDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLSC 194
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Planmine SMEST
Match: SMESG000044960.1 (SMESG000044960.1)

HSP 1 Score: 252.677 bits (644), Expect = 3.207e-87
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 3 
Query:  249 MPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYIDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLSC 605
            MPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYIDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLSC
Sbjct:    1 MPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNYIDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLSC 119
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Planmine SMEST
Match: SMESG000079648.1 (SMESG000079648.1)

HSP 1 Score: 104.375 bits (259), Expect = 1.972e-27
Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 3 
Query:  147 EKLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVD 338
            +KL  QRQAAN+RER+RMQSIN+AFE LR HIPT+PYEKRLSKVDTLR+AIGYINFL  +++ +
Sbjct:   98 QKLVFQRQAANLRERRRMQSINEAFEGLRAHIPTLPYEKRLSKVDTLRLAIGYINFLQDLVKTE 161
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Planmine SMEST
Match: SMESG000000956.1 (SMESG000000956.1)

HSP 1 Score: 100.523 bits (249), Expect = 8.874e-26
Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 3 
Query:  150 KLARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQG 344
            KLA +RQAAN+RER+RMQSIN+AFE LR HIPTMPYEKRLSKVDTLR+AI YI FL  +++ D G
Sbjct:  100 KLA-ERQAANIRERRRMQSINEAFEGLRCHIPTMPYEKRLSKVDTLRLAISYIGFLQELIKSDCG 163
[Close]
BLAST of Pancreas transcription factor 1 subunit alpha vs. Planmine SMEST
Match: SMESG000029000.1 (SMESG000029000.1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.000e-17
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 3 
Query:  162 QRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEEI 353
            QR+AAN+RER+RM S+N+AF+ LR  +PT  YEKRLS+++TLR+AI YI F+  ++     + I
Sbjct:  138 QRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNI 201
The following BLAST results are available for this feature:
BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PTF1A8.786e-2776.19pancreas associated transcription factor 1a [Sourc... [more]
FERD3L1.649e-1653.97Fer3 like bHLH transcription factor [Source:HGNC S... [more]
TWIST14.095e-1452.31twist family bHLH transcription factor 1 [Source:H... [more]
TCF151.407e-1344.00transcription factor 15 [Source:HGNC Symbol;Acc:HG... [more]
TWIST11.555e-1352.31twist family bHLH transcription factor 1 [Source:H... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hlh-132.123e-1950.00Helix-loop-helix protein 13 [Source:UniProtKB/Swi... [more]
hlh-153.546e-1252.00Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:Q18... [more]
ngn-17.978e-1133.33NeuroGeNin [Source:UniProtKB/TrEMBL;Acc:Q95XG7][more]
hlh-81.478e-1053.70Twist-related protein [Source:UniProtKB/Swiss-Pro... [more]
hlh-61.651e-1043.24Helix-loop-helix protein 6 [Source:UniProtKB/Swis... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Fer18.341e-2867.14gene:FBgn0037475 transcript:FBtr0081567[more]
Fer19.775e-2867.14gene:FBgn0037475 transcript:FBtr0334670[more]
Fer24.585e-2252.87gene:FBgn0038402 transcript:FBtr0301709[more]
Fer25.727e-2255.68gene:FBgn0038402 transcript:FBtr0344012[more]
Fer22.890e-2150.00gene:FBgn0038402 transcript:FBtr0344010[more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ptf1a1.302e-2681.03pancreas associated transcription factor 1a [Sourc... [more]
si:dkey-34f9.34.513e-2271.43si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-41... [more]
ferd3l4.104e-1961.40Fer3-like bHLH transcription factor [Source:ZFIN;A... [more]
tcf157.691e-1639.36transcription factor 15 [Source:ZFIN;Acc:ZDB-GENE-... [more]
si:ch211-246m6.47.729e-1640.70si:ch211-246m6.4 [Source:ZFIN;Acc:ZDB-GENE-050208-... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PTF1A7.199e-2681.03pancreas associated transcription factor 1a [Sourc... [more]
ENSXETT00000031930.15.254e-2157.14pep primary_assembly:Xenopus_tropicalis_v9.1:9:556... [more]
tcf152.149e-1644.59transcription factor 15 [Source:NCBI gene;Acc:5492... [more]
ferd3l2.441e-1657.89Fer3-like bHLH transcription factor [Source:NCBI g... [more]
hnrnpc3.913e-1644.59heterogeneous nuclear ribonucleoprotein C (C1/C2) ... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ptf1a6.615e-2776.19pancreas specific transcription factor, 1a [Source... [more]
Ferd3l3.427e-1755.56Fer3 like bHLH transcription factor [Source:MGI Sy... [more]
Tcf154.240e-1735.65transcription factor 15 [Source:MGI Symbol;Acc:MGI... [more]
Twist21.169e-1352.31twist basic helix-loop-helix transcription factor ... [more]
Twist21.169e-1352.31twist basic helix-loop-helix transcription factor ... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q7RTS3|PTF1A_HUMAN4.219e-2676.19Pancreas transcription factor 1 subunit alpha OS=H... [more]
sp|Q9QX98|PTF1A_MOUSE4.627e-2676.19Pancreas transcription factor 1 subunit alpha OS=M... [more]
sp|Q64305|PTF1A_RAT5.032e-2676.19Pancreas transcription factor 1 subunit alpha OS=R... [more]
sp|Q7ZSX3|PTF1A_DANRE9.829e-2681.03Pancreas transcription factor 1 subunit alpha OS=D... [more]
sp|Q4ZHW1|PTF1A_XENLA1.705e-2581.03Pancreas transcription factor 1 subunit alpha OS=X... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
U5YR632.582e-5798.86Ptf-1 protein (Fragment) OS=Schmidtea mediterranea... [more]
A0A194PER33.870e-2854.31Pancreas transcription factor 1 subunit alpha OS=P... [more]
A0A194QVL71.260e-2758.42Pancreas transcription factor 1 subunit alpha OS=P... [more]
A0A1D2MGL81.517e-2775.71Pancreas transcription factor 1 subunit alpha OS=O... [more]
A0A3S2N3E95.212e-2765.48BHLH domain-containing protein (Fragment) OS=Chilo... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ptf1a3.234e-2781.03pancreas associated transcription factor 1a [Sourc... [more]
si:dkey-34f9.32.343e-2171.43neurogenic differentiation factor 1-like [Source:N... [more]
ferd3l1.687e-1865.38Fer3-like bHLH transcription factor [Source:ZFIN;A... [more]
scxa7.621e-1652.38scleraxis bHLH transcription factor a [Source:ZFIN... [more]
twist1a3.178e-1542.39twist family bHLH transcription factor 1a [Source:... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000004072.12.463e-2573.33pep scaffold:Pmarinus_7.0:GL492732:1750:4325:-1 ge... [more]
si:dkey-34f9.33.779e-2463.08si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-41... [more]
TWIST13.253e-1543.21twist family bHLH transcription factor 1 [Source:H... [more]
scxa4.020e-1453.57scleraxis bHLH transcription factor a [Source:ZFIN... [more]
TWIST16.124e-1354.39twist family bHLH transcription factor 1 [Source:H... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO438491.097e-2684.62Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO429241.224e-1554.39Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO462401.943e-1548.19Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
TWIST3.425e-1344.16Predicted protein; Twist family bHLH transcription... [more]
EDO461941.694e-1236.73Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ptf1a6.728e-2774.60pancreas associated transcription factor 1a [Sourc... [more]
si:dkey-34f9.33.101e-2160.56si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-41... [more]
ferd3l1.135e-1857.89Fer3 like bHLH transcription factor [Source:NCBI g... [more]
scxb1.772e-1549.25scleraxis bHLH transcription factor [Source:NCBI g... [more]
twist21.553e-1438.02twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235][more]
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BLAST of Pancreas transcription factor 1 subunit alpha vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000044960.11.934e-13399.44SMESG000044960.1[more]
SMESG000044960.13.207e-87100.00SMESG000044960.1[more]
SMESG000079648.11.972e-2773.44SMESG000079648.1[more]
SMESG000000956.18.874e-2673.85SMESG000000956.1[more]
SMESG000029000.19.000e-1751.56SMESG000029000.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30034009 ID=SMED30034009|Name=Pancreas transcription factor 1 subunit alpha|organism=Schmidtea mediterranea sexual|type=transcript|length=615bp
GTTATTTTCTAAAAGAAAATTTCAAATGCGTAAAAATATTGATAGTAATT
CTAAAGTTTCAAAAGGTTTTAAATCGAAAGAGTCATTTAAAGAAAAATTT
TCCAAGAAAAAATTCGGATTCACGATTTAGTCGATCGAAATGTCCAGAGA
AATTGGCAAGGCAGAGACAAGCCGCAAACATGAGAGAACGTAAGAGGATG
CAATCTATAAATGATGCTTTTGAAAAATTACGAGTTCACATACCGACAAT
GCCGTATGAAAAACGCTTGTCGAAAGTTGACACTCTTCGAATGGCAATTG
GTTATATCAATTTCCTTGGGGGTATAATGCAAGTAGATCAAGGAGAGGAA
ATTTATGAAAAAACTTTTATTGCTAATGATCAATTTCAAACCGAATCGAA
TTTAAAAAGTTCCCATCTGCCTTATTCTTTTGCAAATTCAGAATCAAATT
ATATTGATTATTATGGATGGGCTCATGCCAATAGCATTCAAAACTTTTAC
CCGGAAATCAATTCAACAGTAGATGTTATTCAAAAAAGAACTAATCAAAT
ATTTCAAAATTGTTACAATTATACTAATGAATTTGAATATCCATTCTTAT
CTTGTTAAAACTGTG
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protein sequence of SMED30034009-orf-1

>SMED30034009-orf-1 ID=SMED30034009-orf-1|Name=SMED30034009-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=202bp
YFLKENFKCVKILIVILKFQKVLNRKSHLKKNFPRKNSDSRFSRSKCPEK
LARQRQAANMRERKRMQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIG
YINFLGGIMQVDQGEEIYEKTFIANDQFQTESNLKSSHLPYSFANSESNY
IDYYGWAHANSIQNFYPEINSTVDVIQKRTNQIFQNCYNYTNEFEYPFLS
C*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000120progenitor cell
PLANA:0000121stem cell
PLANA:0000420parapharyngeal region
PLANA:0002142parenchyma
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: molecular function
TermDefinition
GO:0046983protein dimerization activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43