Neur_chan_LBD domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30033894 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 15
Homology
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 56.6102 bits (135), Expect = 9.043e-8 Identity = 66/285 (23.16%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 56.225 bits (134), Expect = 1.053e-7 Identity = 67/285 (23.51%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 34 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 301
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 56.225 bits (134), Expect = 1.561e-7 Identity = 67/285 (23.51%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 123 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 390
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 55.8398 bits (133), Expect = 1.662e-7 Identity = 67/285 (23.51%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB2 (gamma-aminobutyric acid type A receptor beta2 subunit [Source:HGNC Symbol;Acc:HGNC:4082]) HSP 1 Score: 53.5286 bits (127), Expect = 5.770e-7 Identity = 64/285 (22.46%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + + + +E ++++ ++ + K V + G R +++F + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 3 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD-NAVTGVTKIELPQFSIVDYKLITKKVVFS---TGSYPRLSLSF--KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGR 270
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: CG8916 (gene:FBgn0030707 transcript:FBtr0301233) HSP 1 Score: 52.373 bits (124), Expect = 1.097e-6 Identity = 60/269 (22.30%), Postives = 110/269 (40.89%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLLDNRSDIKDISLS-----SFWNPKISIENIFMETKSSISHEVSYSGK----AREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNS 1176 YS + + + WR+ L + IK +SLS W P + F K S H ++ K + I R++ +ELQ+FP D Q + + + IN+ + E + ++ + GM +++L + TV + + + R YFLI + + + ++ + T R+ LC+T++LT T + +LPK+ Y T LD +L + + C+ + + TK+ S S Sbjct: 52 YSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRP----DTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFS-----VLHVAFNLKRHTGYFLI-QVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLL--MSFLYCIATLLEFAGVHYFTKLGSGES 308
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: CG8916 (gene:FBgn0030707 transcript:FBtr0301232) HSP 1 Score: 51.9878 bits (123), Expect = 1.404e-6 Identity = 60/269 (22.30%), Postives = 110/269 (40.89%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLLDNRSDIKDISLS-----SFWNPKISIENIFMETKSSISHEVSYSGK----AREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNS 1176 YS + + + WR+ L + IK +SLS W P + F K S H ++ K + I R++ +ELQ+FP D Q + + + IN+ + E + ++ + GM +++L + TV + + + R YFLI + + + ++ + T R+ LC+T++LT T + +LPK+ Y T LD +L + + C+ + + TK+ S S Sbjct: 154 YSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRP----DTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFS-----VLHVAFNLKRHTGYFLI-QVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLL--MSFLYCIATLLEFAGVHYFTKLGSGES 410
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]) HSP 1 Score: 55.8398 bits (133), Expect = 1.164e-7 Identity = 60/247 (24.29%), Postives = 105/247 (42.51%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISI-ENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHI----MIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLD 1077 I VD +N Y+ +IF W + L S +K + L+S KI I + F ++ S +H ++ + + + R++ L+L +FP D + S+ YP NE++ + +++ + + W LY+ V + + N E MT SRR YF I MI + ++ + + P R L +TT+LT T ++LPK+ Y+T +D Sbjct: 95 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRW------QRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPA-----RTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD 330
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]) HSP 1 Score: 55.0694 bits (131), Expect = 1.800e-7 Identity = 60/247 (24.29%), Postives = 105/247 (42.51%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFME-TKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHI----MIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLD 1077 I VD +N Y+ +IF W + L S +K + L+S KI I + F ++ S +H ++ + + + R++ L+L +FP D + S+ YP NE++ + +++ + + W LY+ V + + N E MT SRR YF I MI + ++ + + P R L +TT+LT T ++LPK+ Y+T +D Sbjct: 95 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRW------QRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPA-----RTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD 330
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230]) HSP 1 Score: 54.299 bits (129), Expect = 3.246e-7 Identity = 65/285 (22.81%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ S + +D +E ++++ ++ + K V G R +++F + R YF++ M S++ +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 75 IDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNR--VAD----QLWVP----DTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW--QGGSSVTGVDNIELPQFSIIDYKTLSKKVVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSTLITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGR 341
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrb4 (gamma-aminobutyric acid type A receptor beta4 subunit [Source:ZFIN;Acc:ZDB-GENE-070424-211]) HSP 1 Score: 53.5286 bits (127), Expect = 6.046e-7 Identity = 61/279 (21.86%), Postives = 123/279 (44.09%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D+++E Y+ ++ Q WR+ L +++L + W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++ D N + G++ E + VE+ + G R +++F R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 68 INIASIDSISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTLDNRVADQLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGD----NAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGR 335
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrb2a (gamma-aminobutyric acid type A receptor beta2 subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-8196]) HSP 1 Score: 51.9878 bits (123), Expect = 1.013e-6 Identity = 62/272 (22.79%), Postives = 119/272 (43.75%), Query Frame = 1 Query: 397 YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + G+E E + V+ + SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 14 YTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD----GAVSGVERIELPQFSIVDYKLISKNVVFSTGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 266
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000020814.1 (gamma-aminobutyric acid type A receptor theta subunit [Source:NCBI gene;Acc:100496398]) HSP 1 Score: 60.077 bits (144), Expect = 6.415e-9 Identity = 65/280 (23.21%), Postives = 126/280 (45.00%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I ++ VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y I+++K + + + + +E ++ + E + SK V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 60 IDQISEVNMDYTITMYFQQSWRDKRLAYTALPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEEAAVTGVSALELPQFTIIE-TRLVSKNVVFTTGSYPR----LSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGR 323
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000020832.1 (gamma-aminobutyric acid type A receptor theta subunit [Source:NCBI gene;Acc:100496398]) HSP 1 Score: 60.077 bits (144), Expect = 6.573e-9 Identity = 65/280 (23.21%), Postives = 126/280 (45.00%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I ++ VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y I+++K + + + + +E ++ + E + SK V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 77 IDQISEVNMDYTITMYFQQSWRDKRLAYTALPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEEAAVTGVSALELPQFTIIE-TRLVSKNVVFTTGSYPR----LSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGR 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000004017.1 (gamma-aminobutyric acid (GABA) A receptor, beta 1 [Source:NCBI gene;Acc:100489344]) HSP 1 Score: 58.5362 bits (140), Expect = 2.106e-8 Identity = 69/289 (23.88%), Postives = 130/289 (44.98%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 V +R I V VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++K D + ++ +E ++++ ++ V S+ VI PR ++ + R R YF++ M S++ +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F K Sbjct: 63 VGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGD-KAITGVEKIELPQFSIIDYKMV-SRNVIFSTGAYPR----LSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA-RVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGK 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: dusp5 (dual specificity phosphatase 5 [Source:Xenbase;Acc:XB-GENE-957572]) HSP 1 Score: 55.8398 bits (133), Expect = 1.708e-7 Identity = 65/285 (22.81%), Postives = 131/285 (45.96%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + + ++ +E ++++ +H ++ SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGD-NAVTGVERIELPQFSIMDH-KLVSKNVVFATGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027]) HSP 1 Score: 52.373 bits (124), Expect = 1.717e-6 Identity = 67/287 (23.34%), Postives = 127/287 (44.25%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++ + N + G+E E + ++ S+ V+ + G R +++F R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 49 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSVIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGN----NAVTGVERLELPQFSIIDYNLLSRNVV--FSTGSYPRLSLSFKLR--RNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGR 316
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 56.6102 bits (135), Expect = 7.261e-8 Identity = 66/285 (23.16%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 56.225 bits (134), Expect = 9.777e-8 Identity = 67/285 (23.51%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 89 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 356
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 55.8398 bits (133), Expect = 1.065e-7 Identity = 67/285 (23.51%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Glra4 (glycine receptor, alpha 4 subunit [Source:MGI Symbol;Acc:MGI:95750]) HSP 1 Score: 54.299 bits (129), Expect = 3.172e-7 Identity = 62/266 (23.31%), Postives = 110/266 (41.35%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLL------DNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTC-----RASRRFKYFLIN----HIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHAS 1134 Y +FL+ +W +P L D+ D+ L S W P + F K + HEV+ K + + R++ ++L++FP D Q ++ + S Y +N++ M E D + +G+ ++ L + D + T FTC R+ Y+LI ++I + ++ + + AP R+GL +TT+LT T +LPK+ Y+ +D I M +CL A+ Sbjct: 91 YRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDL----FFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDL-MFEWLEDAPAVQVAEGLTLPQFILRDE---------KDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPA-----RVGLGITTVLTMTTQSSGSRASLPKVSYVKAID------IWMAVCLLFVFAA 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Glra1 (glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]) HSP 1 Score: 53.1434 bits (126), Expect = 5.726e-7 Identity = 62/260 (23.85%), Postives = 110/260 (42.31%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLL------DNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGK----AREAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTC-----RASRRFKYFLIN----HIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCL 1116 Y IFL+ +W +P L D+ D+ L S W P + F K + HE++ K +R + R++ ++L++FP D Q + + S Y +N++ + E + + DG+ ++ L E ++ T + T FTC R+ Y+LI ++I + ++ + + AP R+GL +TT+LT T +LPK+ Y+ +D I M +CL Sbjct: 3 YRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDL----FFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDL-IFEW-QEQGAVQVADGLTLPQFILKEEKDLRYCT---------KHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPA-----RVGLGITTVLTMTTQSSGSRASLPKVSYVKAID------IWMAVCL 236
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P19019|GBRB3_CHICK (Gamma-aminobutyric acid receptor subunit beta-3 OS=Gallus gallus OX=9031 GN=GABRB3 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.421e-7 Identity = 71/287 (24.74%), Postives = 126/287 (43.90%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D N + G+E E + VE SK V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F K Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD----NAVTGVERIELPQFSIVEYRLVSKNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGK 334
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P28472|GBRB3_HUMAN (Gamma-aminobutyric acid receptor subunit beta-3 OS=Homo sapiens OX=9606 GN=GABRB3 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 4.343e-7 Identity = 66/285 (23.16%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P63079|GBRB3_RAT (Gamma-aminobutyric acid receptor subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gabrb3 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 5.079e-7 Identity = 66/285 (23.16%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P63080|GBRB3_MOUSE (Gamma-aminobutyric acid receptor subunit beta-3 OS=Mus musculus OX=10090 GN=Gabrb3 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 5.079e-7 Identity = 66/285 (23.16%), Postives = 129/285 (45.26%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + S+ V+ PR ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P24045|GBRB4_CHICK (Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus OX=9031 GN=GABRB4 PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 2.055e-6 Identity = 64/280 (22.86%), Postives = 123/280 (43.93%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I ++ VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ +D + + GME E L + +E + V + ++ + R R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 71 IDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGND----SAVTGMEVLE--LPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGR 333
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A4E0RSR9 (Uncharacterized protein OS=Fasciola hepatica OX=6192 GN=D915_005714 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 4.686e-70 Identity = 147/367 (40.05%), Postives = 213/367 (58.04%), Query Frame = 1 Query: 355 VFIKIFKVDTVNEFYSAEIFLQSKWREPLLD-------------NRSDIKD---------------ISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQ--TMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHA-STSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEK 1362 +F+KI +VDTVNE Y A+IFLQ++WREPLLD +S +++ + FWNP++ ++N E +SHEV + EAY+ EKRR+ G F E LEL+HFPFD QDLS+TV+ + ++EV ++ P ++S+++ +SQEW ++ HV+VE + + G +R+ + FT R++RR YF++N ++IS + LL+F FS+ N RL + LLT+VTFK A SQNLPKI YLTYLDK +L N M++ L +WH + SL DN EKY++ +L+ Y L + GLT+Y DAG RRR M KDVEF ++ +IE EK Sbjct: 3 IFVKIGQVDTVNERYQADIFLQARWREPLLDATWKSERAQKNWRGKSGVENPIQDLVPKRHLHTLGLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPTFEAYLVEKRRIKGVFHETLELKHFPFDVQDLSVTVTCDRSVDEVLLVPSPTEVSQVDRRGAADSQEWKIFHHVDVERMEIQTAYSPGTSKRRHPGLVFTSRSARRSGYFMVNMVLISCVLCLLSFCIFSVPVDGN---RLQQALLLLLTTVTFKFAASQNLPKISYLTYLDKVVLANFFMLVILTVWHTIARSLSASYPKLLDN-----------EKYVVYTLLSSYCLGAVIFGLTVYLDAGSRRRLMQRKDVEFGQLKTRIEREK 355
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A3R7CFX9 (Neuronal acetylcholine receptor subunit alpha-7 OS=Clonorchis sinensis OX=79923 GN=CHRNA7 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 6.206e-70 Identity = 144/371 (38.81%), Postives = 214/371 (57.68%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDN-------RSDIKDISL---------------------SSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIG--PRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEK 1362 V L +F+KI +VDTVNE Y A+IFLQ++WREPLLD R++ + + FWNP++ ++N E +SHEV + EAY+ EKRR+ G F E LEL+HFPFDCQDLS+TV+ + + EV+++ P ++S+++ +SQEW ++ HV++ S + + G R + FT R++RR YF++N +IS + LL+F+ FS+ N RL L + LLT+VTFK A SQNLPKI YLTYLDK +L N M++ L +WH F ++ E+Y++ +L+ Y L + GLT+Y DAG RRR M +KD++F++ ++IE EK Sbjct: 39 VELMLIFVKIGQVDTVNERYQADIFLQARWREPLLDATWNTSRPRNNFRTFKMVENPVMELAPKRHLHTLKLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPDFEAYLVEKRRIKGVFHETLELKHFPFDCQDLSVTVTCDRTVEEVELVPSPTEVSQVDRRCAADSQEWKIFHHVDIASMEIQTAYSPGTCKRRHPGLVFTSRSARRAGYFMVNMALISCVLSLLSFSVFSVPVDGN---RLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKMVLANFFMLVILTVWHTIARSVF----------AKYPGLKDKEQYVVYTLLSAYCLGAVVFGLTVYLDAGSRRRLMKSKDMDFTQHKQRIELEK 396
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A075A8W6 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_08254 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 7.710e-68 Identity = 147/379 (38.79%), Postives = 218/379 (57.52%), Query Frame = 1 Query: 316 VNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDN-------RSDIKDISL---------------------SSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIG--PRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEK 1362 V P AR V L +F+KI +VDTVNE Y A+IFLQ++WREPLLD R++ + ++ FWNP++ ++N E +SHEV + EAY+ EKRR+ G F E LEL+HFPFDCQDLS+TV+ + + EV+++ P ++S+++ +SQEW ++ HV++ S + + G R + FT R++RR YF++N +IS + LL+F+ FS+ N RL L + LLT+VTFK A SQNLPKI YLTYLDK +L N M++ L +WH F ++ E+Y++ +L+ Y L + GLT+Y DAG RRR M +KD++F++ ++IE K Sbjct: 232 VRHPPAR-VELMLIFVKIGQVDTVNERYQADIFLQARWREPLLDATWNTSRPRNNFRTFNMVENPVMELAPKRHLHTLKLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPDFEAYLVEKRRIKGIFHETLELKHFPFDCQDLSVTVTCDRTVEEVELVPSPTEVSQVDRRCAADSQEWKIFHHVDIASMEIQTAYSPGTCKRRHPGLVFTSRSARRAGYFMVNMALISCVLSLLSFSVFSVPVDGN---RLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKMVLANFFMLVILTVWHTIARSVF----------AKYPGLKDKEQYVVYTLLSAYCLGAVVFGLTVYLDAGSRRRLMKSKDMDFTQHKQRIELAK 596
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: R7VF52 (Neur_chan_LBD domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_228357 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.527e-66 Identity = 131/345 (37.97%), Postives = 203/345 (58.84%), Query Frame = 1 Query: 337 LVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRS--DIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTI------YFDAGKRRREMIAKDVEFSEMIKK 1347 V LR VF+KI ++DT+ E YSA+ F+Q+KWREP LD ++ ++K I L FWNP + IEN+ ETK + S + +A EA++ E+RRV G F E LEL FP D QDL++T+++E P E+ ++ +++S +N ++ QEW L+EH+EV K + + + R ++ TCRA+RR YF N ++ L+F +F+++P+ RL L T LLTS+TFK ++Q+LPKI YLTY+DK +L ++V++ +C+WHA ++F GI + VF +++ +G + YFDA KRRR M KD E+ + + K Sbjct: 33 FVELRVVFLKIGEIDTLKEQYSADTFIQAKWREPALDGKTTEELKRIDLDRFWNPLLFIENVLSETKEATWLTASTNSRA-EAFVLERRRVRGVFMENLELNDFPLDVQDLTVTITSERPDTEIDIIPDENEMSGINVQTFVDQQEWRLHEHIEVSKKVMTQEYSSSNRCHPALSVTCRAARRPGYFYWNVFLVMFFISALSFATFAVSPELPQ-NRLQLSFTLLLTSITFKFVINQSLPKISYLTYMDKYVLLSLVILCMVCVWHAVVTVF---------------VHHGINFLMTLERDVFIAFSVIYIGFHVVFIFWLYFDACKRRRLMKHKDKEYLDFLAK 360
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A5K4FCR6 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.121e-66 Identity = 152/386 (39.38%), Postives = 220/386 (56.99%), Query Frame = 1 Query: 301 NNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLD----------------------------NRSDIKDISLSS--FWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVIN--DCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEK 1362 N K +N AR V L +F+K+ +VDTVNE Y A+IFLQ++WREPLLD ++ + + L FWNP++ I+N E ISHEV + EAY+ EKRR+ G F E LEL+HFPFDCQDLS+T++ + +EV+++ P ++S+++ +SQEW ++ HV+++S + + R + FT R++RR YFL+N I+IS + LL+F++FS+ N RL L + LLT+VTFK A SQNLPKI YLTYLDK +L N M++ L +WHA +K E Y++ SL+ Y + + GLT+Y DAG RRR M KD+EF++ ++IE EK Sbjct: 264 NIGKPMNMSKAR-VELVLIFVKVGQVDTVNERYQADIFLQARWREPLLDAMWNKSSLKSKSSWQTNPSIENPFTDLTSKRQLNTLKLQDDEFWNPRLLIDNAEGEPIEIISHEVEFIEPDFEAYLVEKRRIKGIFHETLELRHFPFDCQDLSVTITCDRTTDEVELVASPTEVSQVDVRCAADSQEWKIFHHVDIKSIEIQTGYSPSTSKRHHPGLVFTSRSARRSGYFLVNMILISCVLCLLSFSAFSVPANEN---RLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKVVLVNFFMLVILTVWHAIARAVSASK----------PKFLEYEHYVMYSLLSCYCIGSVLFGLTVYLDAGSRRRLMKRKDIEFNQYKQQIEAEK 635
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230]) HSP 1 Score: 54.6842 bits (130), Expect = 2.157e-7 Identity = 65/285 (22.81%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + S + +D +E ++++ ++ + K V G R +++F + R YF++ M S++ +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 53 IDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNR--VAD----QLWVP----DTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW--QEGSSVTGVDNIELPQFSIIDYKTLSKKVVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSNLITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGR 319
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb2a (gamma-aminobutyric acid type A receptor beta2 subunit [Source:NCBI gene;Acc:103045154]) HSP 1 Score: 53.5286 bits (127), Expect = 5.369e-7 Identity = 67/287 (23.34%), Postives = 126/287 (43.90%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + G+E E + V+ + SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 65 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD----GAVSGVERIELPQFSIVDYKLISKNVVFSTGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 332
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb2a (gamma-aminobutyric acid type A receptor beta2 subunit [Source:NCBI gene;Acc:103045154]) HSP 1 Score: 53.1434 bits (126), Expect = 6.146e-7 Identity = 67/287 (23.34%), Postives = 126/287 (43.90%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + G+E E + V+ + SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 65 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD----GAVSGVERIELPQFSIVDYKLISKNVVFSTGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 332
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:103038806]) HSP 1 Score: 52.373 bits (124), Expect = 1.099e-6 Identity = 66/287 (23.00%), Postives = 127/287 (44.25%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + + + G+E E + V+ + SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 68 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGN----HAVTGVERIELPQFSIVDYKLISKNVVFSTGAYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGR 335
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:103041149]) HSP 1 Score: 52.373 bits (124), Expect = 1.193e-6 Identity = 64/279 (22.94%), Postives = 122/279 (43.73%), Query Frame = 1 Query: 376 VDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--SKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 V VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D N + G+ E + V+ + S+ V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 96 VSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGD----NAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGR 355
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Match: glra2 (glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]) HSP 1 Score: 48.521 bits (114), Expect = 2.850e-6 Identity = 60/266 (22.56%), Postives = 112/266 (42.11%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLL------DNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTC-----RASRRFKYFLIN----HIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHAS 1134 Y IFL+ +W +P L D+ D+ L S W P + F K + HEV+ K ++ + R++ ++L++FP D Q ++ + S Y +N++ + E + + +G+ ++ L + ++ T + T FTC R+ Y+LI ++I + ++ + + AP R+ L +TT+LT T +LPK+ Y+ +D I M +CL A+ Sbjct: 27 YRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDL----FFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDL-IFEWKQE-GAVQVAEGLTLPQFVLKDEKDLVYCT---------KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPA-----RVALGITTVLTMTTQSSGSRASLPKVSYVKAID------IWMAVCLLFVFAA 266
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO32790 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU26]) HSP 1 Score: 102.834 bits (255), Expect = 1.404e-23 Identity = 75/266 (28.20%), Postives = 136/266 (51.13%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGM---ESQEWNLYEHVEVESKTVINDCNIGPRERQTMTF--TCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCI 1122 V +RC + +D + + ++ E+++ + WREP L + + +++ + W+PKIS N + + + Y + E ++ G F+E L+ FP D Q+LSI +S+++ V + D++K + + ++W LY HV ++ T + +GP +R + T RR ++ N ++ S+ L+F SF+I PQ T RL + + LL SV +K S +LP+ YLT+LDK LGN++ I + + Sbjct: 18 VLIRCGISFLGDIDVIRQQFTCELWMTASWREPKLAGKKN-EEVKWDNEWSPKISFSNSLLLDRVYKGRRLYYEENSTVPLAQEVYKIRGTFKEQFSLEQFPVDLQELSIIISSDWSDRTVTFEK---DMAKPDYLRQQTFSSPRDWVLYPHVHTDTATQEGE-GLGPNDRSYPVYIITAHVRRRAVHYFWNTAVVMSVLTALSFASFAIPPQ-QTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFISFIAV 277
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO35410 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK4]) HSP 1 Score: 59.6918 bits (143), Expect = 1.021e-9 Identity = 70/278 (25.18%), Postives = 133/278 (47.84%), Query Frame = 1 Query: 313 SVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLL--DNRSDIKDISLSSFWNPKISIENI-FMETKSSISHEVSYSGKAREAYITEKRRVSGGFREV---------LELQHFPFDCQDLSITVSTEYPINEVKMLECPHD-LSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMI 1107 S +PV +VY+ I+ + +N ++ +I+L+ WR+ L + ++ ++LSS N +I + + F+ TK + H+V+ + Y+ + + F + L+L+ FP D Q S+++ + Y +L ++ L + I + E +E + V +N NIG F R RR YFLI+ + S++ ++++ SF I P+T R+ L +TT+LT T + NLPK+ Y+ +D +L ++ + Sbjct: 41 SKGEPV--VVYVDMYVSNIWAMQEMNMDFTIDIYLRQYWRDERLQFETQTPGAMLTLSSDINKQIWVPSTYFLATKKAYFHDVT-----TDNYLLQVKPDGSLFYSIRLTITTSCRLDLRDFPHDTQSCSLSLES-YGYQSTDVLYVWNERLDNTSAIYIHDDLELPQFEVLGVSRSAKMNKYNIGNHSSLVANF--RMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAP-ARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCLIFV 307
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO26859 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAV8]) HSP 1 Score: 52.7582 bits (125), Expect = 5.568e-8 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 763 QEWNLYEHVEVESKTVINDCNIGPRERQTMTF--TCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCI 1122 ++W LY HV ++ T + +GP +R + T RR ++ N ++ S+ L+F SF+I PQ T RL + + LL SV +K S +LP+ YLT+LDK LGN++ I + + Sbjct: 16 RDWVLYPHVHTDTATQEGE-GLGPNDRSYPVYIITAHVRRRAVHYFWNTAVVMSVLTALSFASFAIPPQ-QTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFISFIAV 135
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO43147 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZH2]) HSP 1 Score: 51.2174 bits (121), Expect = 4.837e-7 Identity = 61/260 (23.46%), Postives = 112/260 (43.08%), Query Frame = 1 Query: 364 KIFKVDTVNEF---YSAEIFLQSKWREP-LLDNRSD---IKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMI 1107 K+ + +NE +S +IF + W EP N S+ + + + FW P + F+ K S H+V+ Y + R++ + + LQ FP D Q + + S Y ++K P + I +Q + VE ++ + G + TF+ + RR +YF I + + + +L++ F I P R+ L +TT+L+++ V+ +PK+ Y+ +D +LGN I Sbjct: 35 KVVSLGGINEASMEFSMDIFFRQWWHEPRFTHNYSEPFTMAEDAGKLFWIP----DTYFINAKKSNFHKVTKENARIIIYPSGNVYYSVRLTLTLQCNMNLQLFPMDVQACPLFIESYAYTSEDIKYKWTPRGTKGIEIISNETAQ----FVLVEARTEQIATAKISGHFSQLVATFSLK--RRLEYFAITVVTPAMILVVLSWCCFWIVPDA-IPARISLSVTTILSTLLLSGTVNAQMPKVSYMKAIDVFVLGNFAFI 283
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrb2a (gamma-aminobutyric acid type A receptor beta2 subunit [Source:NCBI gene;Acc:101165154]) HSP 1 Score: 55.0694 bits (131), Expect = 1.378e-7 Identity = 71/324 (21.91%), Postives = 145/324 (44.75%), Query Frame = 1 Query: 271 ILICDTNKMENNSKSVNKPVARL-----VYLRCVF----------IKIFKVDTVNEF---YSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I +CD K +N V + V RL + LR F I I +D V+E Y+ ++ Q WR+ L +++L + W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + ++ +D +E ++++ ++ ++ SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 18 ISLCDDIKDPSNMPLVKETVDRLMKGYDIRLRPDFGGAPVAVGMNIDISSIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGE-GAVSGVDRIELPQFSIVDY-KLISKNVVFSTGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQ 330
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:NCBI gene;Acc:101154825]) HSP 1 Score: 54.299 bits (129), Expect = 2.433e-7 Identity = 63/286 (22.03%), Postives = 131/286 (45.80%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKML-ECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + + + ++ +E ++++ ++ + +K V G R +++F + R YF++ M S++ +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 64 IDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNR--VAD----QLWVP----DTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSNAGSVTGVENIELPQFSIIDYQTLSTKAVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSTLITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGR 333
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169]) HSP 1 Score: 54.299 bits (129), Expect = 2.840e-7 Identity = 64/285 (22.46%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + + ++ +E ++++ +H ++ SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 62 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFY-WRGGVGAVTGVERIELPQFSIVDH-KLISKNVVFSTGAYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGR 329
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169]) HSP 1 Score: 54.299 bits (129), Expect = 3.017e-7 Identity = 64/285 (22.46%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTK 1158 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + + ++ +E ++++ +H ++ SK V+ PR ++ + + R YF++ M S + +L++ SF I + R+ L +TT+LT T + + LPKIPY+ +D ++G V + + +A + F + Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFY-WRGGVGAVTGVERIELPQFSIVDH-KLISKNVVFSTGAYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA-RVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGR 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:NCBI gene;Acc:101155813]) HSP 1 Score: 53.1434 bits (126), Expect = 6.766e-7 Identity = 59/247 (23.89%), Postives = 103/247 (41.70%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISI-ENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHI----MIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLD 1077 I VD +N Y+ +IF W + L S +K + L+S KI I + F ++ S +H ++ + + + R++ L+L +FP D + S+ YP NE+ + ++ + + W LY+ V + + + E MT SRR YF I MI + ++ + + P R L +TT+LT T ++LPK+ Y+T +D Sbjct: 88 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPRNEIMYRW------QRRAVEVADQRYWRLYQFAFVGMRNTSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPA-----RTSLGITTVLTMTTLSTISRKSLPKVSYITAMD 323
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041829.1 (SMESG000041829.1) HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0 Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC 1380 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMISSMFFLLTFTSFSIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC Sbjct: 1 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMISSMFFLLTFTSFSIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC 362
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041818.1 (SMESG000041818.1) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 274/362 (75.69%), Postives = 311/362 (85.91%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC 1380 ME SKS +K +LVYLRCVFIKI+KVDT+NEFYS +IFLQ+KWREPLLD+R+D+KDI+LS+FWNPK+ IEN+F E+KSS+ HEVS+S K EAYITEKRR+ FRE LELQHFPFDCQDLSI V+TEY INEVK++E PHDLSKLNTIDGMESQEWNLYEHVEVESKT+IN+CNIGPRERQ MTFTCRASR+FKYFLINHIMISSMFFLLTFTSFSI P NT++RLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDK ILGNI+MIM LCIWHA TSLFF K + + T T + I E+ +IP L+ FY +AIL GL IYFDAGKRRREM+ KD EF+E + KIE EKLFC+VC Sbjct: 1 MEVESKSNHKQSKKLVYLRCVFIKIYKVDTINEFYSGDIFLQAKWREPLLDDRTDMKDINLSTFWNPKLVIENMFQESKSSVVHEVSFSEKRHEAYITEKRRIKACFRETLELQHFPFDCQDLSIPVATEYSINEVKLVELPHDLSKLNTIDGMESQEWNLYEHVEVESKTIINECNIGPRERQIMTFTCRASRKFKYFLINHIMISSMFFLLTFTSFSITPARNTFFRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILMIMSLCIWHACTSLFF--KFTTTDDTTTASVISTAEQKIIPCLLGFYSIAILVSGLAIYFDAGKRRREMLLKDAEFAEALAKIEAEKLFCEVC 360
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041796.1 (SMESG000041796.1) HSP 1 Score: 493.812 bits (1270), Expect = 7.539e-171 Identity = 253/362 (69.89%), Postives = 292/362 (80.66%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYS-GKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDV 1377 MENNSKS R VYLRCVFIKI+KVDTVNEFYS EIFL +KWREPLLDN+SD+KDISLS+FWNPK+SIENIF TKS+ S EVS+ G + A++ EK R+ FRE LELQHFPFDCQDLSI+V TEY I E++M E P+D+SKLNT+DG+ESQEWNLYEHVEVE+K VINDCN GP+ERQ MTFTCRA+RRFKYFLINH MISSMFFLLTF+SFSI TNTY RL LCMTTLLTSVTFKVAVSQNLPKIPYLTYLDK ILGNI+MIM LCIWHA TS +F+ S N+T+ +++ IE LIP+L+ FY +AIL IY+DAG RRREM KD EF + K E E+LFC++ Sbjct: 54 MENNSKSNQIKTKRKVYLRCVFIKIYKVDTVNEFYSGEIFLHAKWREPLLDNKSDLKDISLSTFWNPKLSIENIFQITKSTTSLEVSFDEGNNKRAFVVEKTRIKAAFRETLELQHFPFDCQDLSISVGTEYSIEELEMAENPNDISKLNTLDGIESQEWNLYEHVEVENKIVINDCNFGPKERQIMTFTCRATRRFKYFLINHFMISSMFFLLTFSSFSII-STNTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILMIMLLCIWHAVTSFWFIDP--STNTTVAMSSLTNIENILIPTLLGFYLIAILTFAFIIYYDAGSRRREMTEKDNEFKSLSIKKENERLFCEL 412
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000064433.1 (SMESG000064433.1) HSP 1 Score: 487.263 bits (1253), Expect = 4.439e-169 Identity = 249/347 (71.76%), Postives = 287/347 (82.71%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC 1380 VYLRCVF+KI+KVDTVNEFYS EIFLQSKWREPLLD++ ++KD++L SFWNPK+ IENIF E KSS+S EV+++ K EA+I EKRRV FRE LELQHFPFDCQDLS++V+TEY I+EV ++E P+D+SKLNT+DG+ESQEWNLYEHVEVE+KT+INDCNIGP+ERQ MTFTCRASRRFKYFLINH +ISSMFFLLTFTSFSI P + TY RL LCMTTLLTSVTFKVAVSQNLPKIPYLTYLDK ILGNI+ IM LC WHASTS FF S S T ++ +E Y+I + YGL IL GL IYFDAG RRREM KD EF +++KIE EKLFCDVC Sbjct: 16 VYLRCVFVKIYKVDTVNEFYSGEIFLQSKWREPLLDHKPNLKDVNLFSFWNPKLIIENIFTENKSSVSLEVTFTEKY-EAFIIEKRRVKASFRETLELQHFPFDCQDLSVSVATEYSIDEVDLVETPNDVSKLNTLDGIESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHFLISSMFFLLTFTSFSIPP-SPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDTTIS--SATATANVKQVETYIISCFLGVYGLVILIFGLVIYFDAGSRRREMSDKDREFKRLLEKIENEKLFCDVC 358
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041914.1 (SMESG000041914.1) HSP 1 Score: 456.062 bits (1172), Expect = 7.029e-157 Identity = 229/362 (63.26%), Postives = 287/362 (79.28%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMIXXXXXXXXXXXXXIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC 1380 MEN + + P R +YL+CVF+KI K+DTVNE YS EIFL++KWREPLLD + I + LSS+WNPKI+I NIF+ETKS +S EV ++ K+ EAYI+EKR+V F+E LELQHFPFDCQDLS+TV+T++ I+EVKM ECPH+ S +NTIDGM+SQEW+L+ HV+VESK ++ND NIG +ERQ + FTCRA+R+FKYFLIN+ MISSMF+LLTFTSF I TNT+ RL LCMT LLTSVTFKVAVSQNLPKIPYLTYLDK ILGNI+MIM CIWHA TSL+ +F ++ TTA++ IE +IP++++FY +A+L GL IYFDAGKRRREM KD+EF+ + KI K CD+C Sbjct: 1 MENKAFVIEIPAPRQIYLKCVFLKILKIDTVNEVYSGEIFLEAKWREPLLDQSNYIDNQDLSSYWNPKIAISNIFVETKSLVSREVVFANKSGEAYISEKRKVRATFQETLELQHFPFDCQDLSVTVATDHSIDEVKMFECPHNKSTVNTIDGMDSQEWSLFNHVQVESKIILNDYNIGSKERQIIVFTCRAARQFKYFLINNFMISSMFYLLTFTSFGIQV-TNTFGRLSLCMTVLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNIIMIMITCIWHALTSLW----LFHLSNNEATTALKNIESGIIPAILIFYLIALLIFGLIIYFDAGKRRREMKGKDIEFNRALDKILIAKSSCDIC 357 The following BLAST results are available for this feature:
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30033894 ID=SMED30033894|Name=Neur_chan_LBD domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1935bpback to top protein sequence of SMED30033894-orf-1 >SMED30033894-orf-1 ID=SMED30033894-orf-1|Name=SMED30033894-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=363bp MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|