G_PROTEIN_RECEP_F3_4 domain-containing protein

Overview


Name	G_PROTEIN_RECEP_F3_4 domain-containing protein
Smed ID	SMED30033858
Length (bp)	420

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of G_PROTEIN_RECEP_F3_4 domain-containing protein (SMED30033858) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for G_PROTEIN_RECEP_F3_4 domain-containing protein (SMED30033858) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30033858

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30033858	h1SMcG0010057	dd_Smed_v6_77671_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
oocyte	SMED30033858	h1SMcG0010057	Contig9714	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
oocyte	SMED30033858	h1SMcG0010057	Contig9714	newmark_ests	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30033858	h1SMcG0010057	Contig9714	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30033858	h1SMcG0010057	Contig9714	newmark_ests	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Human
Match: GRM5 (glutamate metabotropic receptor 5 [Source:HGNC Symbol;Acc:HGNC:4597])

HSP 1 Score: 56.225 bits (134), Expect = 1.620e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  729 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 832

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Human
Match: GRM5 (glutamate metabotropic receptor 5 [Source:HGNC Symbol;Acc:HGNC:4597])

HSP 1 Score: 56.225 bits (134), Expect = 1.815e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  729 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 832

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Human
Match: GRM5 (glutamate metabotropic receptor 5 [Source:HGNC Symbol;Acc:HGNC:4597])

HSP 1 Score: 56.225 bits (134), Expect = 1.815e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  729 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 832

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Human
Match: GRM1 (glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593])

HSP 1 Score: 55.8398 bits (133), Expect = 2.380e-9
Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I +    FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTC---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I +    FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTC---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Celegans
Match: mgl-2 (Metabotropic GLutamate receptor family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AU50])

HSP 1 Score: 50.0618 bits (118), Expect = 9.522e-8
Identity = 30/103 (29.13%), Postives = 60/103 (58.25%), Query Frame = 1

Query:   16 CNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALIL-FAVFVNSTLVLGTLFIPKIYALFILKEE 321
            C+ +   F IP  W++  + + T + FKTR LPENF+++K I     C++ +W++ +   + T+      AL++ F+  +++++ L  LF PK+Y + +  E+
Sbjct:  732 CDTETKSFLIPFFWDFFLITLCTLYAFKTRNLPENFNEAKFIGFTMYCTVVVWIAFLVLHMGTT----HKALVMSFSYSLSASVALALLFFPKLYIILMHPEK 830

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Celegans
Match: mgl-2 (Metabotropic GLutamate receptor family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AU50])

HSP 1 Score: 50.0618 bits (118), Expect = 1.013e-7
Identity = 30/103 (29.13%), Postives = 60/103 (58.25%), Query Frame = 1

Query:   16 CNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALIL-FAVFVNSTLVLGTLFIPKIYALFILKEE 321
            C+ +   F IP  W++  + + T + FKTR LPENF+++K I     C++ +W++ +   + T+      AL++ F+  +++++ L  LF PK+Y + +  E+
Sbjct:  732 CDTETKSFLIPFFWDFFLITLCTLYAFKTRNLPENFNEAKFIGFTMYCTVVVWIAFLVLHMGTT----HKALVMSFSYSLSASVALALLFFPKLYIILMHPEK 830

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Celegans
Match: mgl-2 (Metabotropic GLutamate receptor family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AU50])

HSP 1 Score: 49.6766 bits (117), Expect = 1.170e-7
Identity = 30/103 (29.13%), Postives = 60/103 (58.25%), Query Frame = 1

Query:   16 CNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALIL-FAVFVNSTLVLGTLFIPKIYALFILKEE 321
            C+ +   F IP  W++  + + T + FKTR LPENF+++K I     C++ +W++ +   + T+      AL++ F+  +++++ L  LF PK+Y + +  E+
Sbjct:  732 CDTETKSFLIPFFWDFFLITLCTLYAFKTRNLPENFNEAKFIGFTMYCTVVVWIAFLVLHMGTT----HKALVMSFSYSLSASVALALLFFPKLYIILMHPEK 830

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Celegans
Match: mgl-3 (Metabotropic GLutamate receptor family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUI1])

HSP 1 Score: 47.3654 bits (111), Expect = 8.860e-7
Identity = 31/97 (31.96%), Postives = 50/97 (51.55%), Query Frame = 1

Query:   10 MVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSS-FLIQSALILFAVFVNSTLVLGTLFIPKIY 297
            + C        I + +N L ++  T + FKTRK+PENF++++ I      +  LWL+  P   AT S F IQ   +   + ++ T+ L   F PK+Y
Sbjct:  725 LTCKATTSHLLISLLYNILLIVACTVYAFKTRKIPENFNETRHIGFTMYSTCILWLAFGPIYFATQSDFRIQITSLCMCISLSGTVALICFFAPKVY 821

[Close]

Query:   10 MVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSS-FLIQSALILFAVFVNSTLVLGTLFIPKIY 297
            + C        I + +N L ++  T + FKTRK+PENF++++ I      +  LWL+  P   AT S F IQ   +   + ++ T+ L   F PK+Y
Sbjct:  725 LTCKATTSHLLISLLYNILLIVACTVYAFKTRKIPENFNETRHIGFTMYSTCILWLAFGPIYFATQSDFRIQITSLCMCISLSGTVALICFFAPKVY 821

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Zebrafish
Match: grm1a (glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893])

HSP 1 Score: 56.6102 bits (135), Expect = 8.145e-10
Identity = 35/108 (32.41%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   F+V ++ T+ LG +F PK+Y + I K E N
Sbjct:  747 VYLICNTSNVGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FSVSLSVTVALGCMFTPKMY-IIIAKPERN 850

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Zebrafish
Match: grm1a (glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893])

HSP 1 Score: 56.6102 bits (135), Expect = 8.149e-10
Identity = 35/108 (32.41%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   F+V ++ T+ LG +F PK+Y + I K E N
Sbjct:  755 VYLICNTSNVGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FSVSLSVTVALGCMFTPKMY-IIIAKPERN 858

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Zebrafish
Match: grm1b (glutamate receptor, metabotropic 1b [Source:ZFIN;Acc:ZDB-GENE-090821-3])

HSP 1 Score: 56.225 bits (134), Expect = 1.142e-9
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   F+V ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FSVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   F+V ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FSVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Zebrafish
Match: grm5b (glutamate receptor, metabotropic 5b [Source:ZFIN;Acc:ZDB-GENE-090821-6])

HSP 1 Score: 55.4546 bits (132), Expect = 1.872e-9
Identity = 32/108 (29.63%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  T++ FKTR +P NF+++K I      +  +WL+ +P    ++    ++  + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  733 VNLICNTTNLGVVAPLGYNGLLIMSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSN---YKTITMCFSVSLSATVALGCMFVPKVY-IILAKPERN 836

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
Match: GRM5 (glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:100485273])

HSP 1 Score: 57.3806 bits (137), Expect = 6.774e-10
Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN +      P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  735 VYLICNTNNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 838

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
Match: GRM1 (glutamate receptor, metabotropic 1 [Source:NCBI gene;Acc:100495945])

HSP 1 Score: 57.3806 bits (137), Expect = 6.901e-10
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  740 VYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 843

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
Match: GRM5 (glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:100485273])

HSP 1 Score: 57.3806 bits (137), Expect = 7.029e-10
Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN +      P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  724 VYLICNTNNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 827

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
Match: GRM5 (glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:100485273])

HSP 1 Score: 57.3806 bits (137), Expect = 7.097e-10
Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN +      P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  735 VYLICNTNNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 838

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
Match: GRM5 (glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:100485273])

HSP 1 Score: 56.9954 bits (136), Expect = 7.453e-10
Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN +      P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  735 VYLICNTNNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 838

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Mouse
Match: Grm1 (glutamate receptor, metabotropic 1 [Source:MGI Symbol;Acc:MGI:1351338])

HSP 1 Score: 56.9954 bits (136), Expect = 6.971e-10
Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        PVG+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I +    FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VYLICNTSNLGVVAPVGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTC---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        PVG+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I +    FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VYLICNTSNLGVVAPVGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTC---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Mouse
Match: Grm5 (glutamate receptor, metabotropic 5 [Source:MGI Symbol;Acc:MGI:1351342])

HSP 1 Score: 56.6102 bits (135), Expect = 9.528e-10
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  728 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 831

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Mouse
Match: Grm5 (glutamate receptor, metabotropic 5 [Source:MGI Symbol;Acc:MGI:1351342])

HSP 1 Score: 56.225 bits (134), Expect = 1.068e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  728 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 831

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Mouse
Match: Grm5 (glutamate receptor, metabotropic 5 [Source:MGI Symbol;Acc:MGI:1351342])

HSP 1 Score: 56.225 bits (134), Expect = 1.068e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  728 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 831

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
Match: sp|P23385|GRM1_RAT (Metabotropic glutamate receptor 1 OS=Rattus norvegicus OX=10116 GN=Grm1 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 4.318e-9
Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        PVG+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I +    FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VYLICNTSNLGVVAPVGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTC---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
Match: sp|P31424|GRM5_RAT (Metabotropic glutamate receptor 5 OS=Rattus norvegicus OX=10116 GN=Grm5 PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 6.665e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  728 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 831

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
Match: sp|Q3UVX5|GRM5_MOUSE (Metabotropic glutamate receptor 5 OS=Mus musculus OX=10090 GN=Grm5 PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 6.665e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  728 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 831

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
Match: sp|P41594|GRM5_HUMAN (Metabotropic glutamate receptor 5 OS=Homo sapiens OX=9606 GN=GRM5 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 7.780e-9
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  729 VYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 832

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
Match: sp|Q13255|GRM1_HUMAN (Metabotropic glutamate receptor 1 OS=Homo sapiens OX=9606 GN=GRM1 PE=1 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 1.143e-8
Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I +    FAV ++ T+ LG +F PK+Y + I K E N
Sbjct:  742 VYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTC---FAVSLSVTVALGCMFTPKMY-IIIAKPERN 845

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
Match: A0A1I8JG12 (G_PROTEIN_RECEP_F3_4 domain-containing protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.760e-9
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEEL 324
            VE  C+      WIP   N L +L++     + R LP+NFHDSKCI  F++C+ F+W++ IPS++  +S     AL++F +   +   +  LF+PK+YA+   + +L
Sbjct: 2987 VEFQCDYFSSSLWIPYALNLLLMLVTCSLAVRVRSLPDNFHDSKCILAFTACATFVWIAFIPSLVTMASLTSAGALLVFVLLFTNLFAVSILFLPKVYAVVFNRADL 3093

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
Match: A0A1I8HVG3 (G_PROTEIN_RECEP_F3_4 domain-containing protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.224e-9
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEEL 324
            VE  C+      WIP   N + +L++     + R LP+NFHDSKCI  F++C+ F+W++ IPS++  +S     AL++F +   +   +  LF+PK+YA+   + +L
Sbjct:  681 VEFQCDYFSSSLWIPYALNLMLMLVTCSLAVRVRSLPDNFHDSKCILAFTACATFVWIAFIPSLVTMASLTSAGALLVFVLLFTNLFAVSILFLPKVYAVVFNRADL 787

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
Match: A0A1I8HDN7 (G_PROTEIN_RECEP_F3_4 domain-containing protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.243e-9
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEEL 324
            VE  C+      WIP   N + +L++     + R LP+NFHDSKCI  F++C+ F+W++ IPS++  +S     AL++F +   +   +  LF+PK+YA+   + +L
Sbjct: 1298 VEFQCDYFSSSLWIPYALNLMLMLVTCSLAVRVRSLPDNFHDSKCILAFTACATFVWIAFIPSLVTMASLTSAGALLVFVLLFTNLFAVSILFLPKVYAVVFNRADL 1404

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
Match: A0A0L8FPT1 (G_PROTEIN_RECEP_F3_4 domain-containing protein (Fragment) OS=Octopus bimaculoides OX=37653 GN=OCBIM_22011612mg PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.774e-9
Identity = 37/111 (33.33%), Postives = 66/111 (59.46%), Query Frame = 1

Query:    1 YVEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYN 333
            +VEM CN       +P+ +N L ++I  Y+ F++RKLP+NF++S+ I      ++ +WLS +P+   TS    +  ++  A+ +N+T+ L  LF+ K+YAL+  + E   N
Sbjct:   26 FVEMYCNMSPEGLILPLSFNLLLVIICAYYAFRSRKLPDNFNESRYIAFCVDTTLLVWLSFLPTYFLTSRAYYKVLIMSSALIINATVTLICLFVTKVYALYKYRSEYQRN 136

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
Match: W4YWK5 (G_PROTEIN_RECEP_F3_4 domain-containing protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 6.602e-9
Identity = 43/131 (32.82%), Postives = 72/131 (54.96%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQTLHNTVEVSAR*KFFSFSET 396
            V ++CN     F  P+G++ L + + T + FKTR LPENF+++K I      +  +WL+ IP    +    ++  ++ FAV +++T+ LG LF PK Y + +LK E N   ++  T     R    SF+E+
Sbjct:  349 VRLICNTTTFGFAAPLGYDALLISLCTLYAFKTRNLPENFNEAKYIAFTMYTTCIVWLAFIPLYFGSD---LKEIVVCFAVTLSATVTLGCLFFPKTY-IILLKPERNRRSSM--TTSNLVRMHVGSFNES 473

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
Match: grm1a (glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893])

HSP 1 Score: 56.9954 bits (136), Expect = 4.737e-10
Identity = 35/108 (32.41%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   F+V ++ T+ LG +F PK+Y + I K E N
Sbjct:  736 VYLICNTSNVGMIAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FSVSLSVTVALGCMFTPKMY-IIIAKPERN 839

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
Match: grm1b (glutamate receptor, metabotropic 1b [Source:ZFIN;Acc:ZDB-GENE-090821-3])

HSP 1 Score: 56.225 bits (134), Expect = 1.026e-9
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  TY+ FKTR +P NF+++K I      +  +WL+ +P    ++  +I ++   F+V ++ T+ LG +F PK+Y + I K E N
Sbjct:  745 VFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTS---FSVSLSVTVALGCMFTPKMY-IIIAKPERN 848

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
Match: grm2a (metabotropic glutamate receptor 2 [Source:NCBI gene;Acc:103035135])

HSP 1 Score: 55.4546 bits (132), Expect = 1.518e-9
Identity = 31/102 (30.39%), Postives = 59/102 (57.84%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSS-FLIQSALILFAVFVNSTLVLGTLFIPKIYALF 306
            V + CN       + + +N + +++ T++ FKTRK PENF+++K I      +  +WL+  P    T+S + +Q+  +  +V ++ ++VLG LF PKI+ + 
Sbjct:  732 VRLKCNSKDSSMLMSLTYNCILIILCTFYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFQPIFYVTASDYRVQTTTMCISVSLSGSVVLGCLFAPKIHIIL 833

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
Match: grm5b (metabotropic glutamate receptor 5 [Source:NCBI gene;Acc:103045948])

HSP 1 Score: 55.4546 bits (132), Expect = 1.528e-9
Identity = 32/108 (29.63%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  ++    + F+V +++T+ LG +F+PK+Y + + K E N
Sbjct:  733 VNLICNTTNLGVVAPLGYNGLLIMSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIVT---MCFSVSLSATVALGCMFVPKVY-IILAKPERN 836

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
Match: grm2b (metabotropic glutamate receptor 2-like [Source:NCBI gene;Acc:103030591])

HSP 1 Score: 54.6842 bits (130), Expect = 3.180e-9
Identity = 31/102 (30.39%), Postives = 59/102 (57.84%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSS-FLIQSALILFAVFVNSTLVLGTLFIPKIYALF 306
            V + CN       + + +N + +++ T++ FKTRK PENF+++K I      +  +WL+  P    T+S + +Q+  +  +V ++ ++VLG LF PKI+ + 
Sbjct:  709 VTLKCNSLDSSMLVSLTYNCILIILCTFYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFQPIFYVTASDYRVQTTTMCISVSLSGSVVLGCLFAPKIHIIL 810

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004832.1 (pep scaffold:Pmarinus_7.0:GL494148:1537:3056:-1 gene:ENSPMAG00000004396.1 transcript:ENSPMAT00000004832.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 57.7658 bits (138), Expect = 1.143e-11
Identity = 36/108 (33.33%), Postives = 63/108 (58.33%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +PENF+++K I      +  +WL+ +P    +   ++ + L    V ++ST+VLG +F+PK+Y + + K E N
Sbjct:   14 VNLICNTSNLAMVAPLGFNGLLIMSCTYYAFKTRNVPENFNEAKYIAFTMYTTCIIWLAFVPIYFGSKYKIVTTCL---CVSLSSTVVLGCMFLPKVY-IILAKPERN 117

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003019.1 (pep scaffold:Pmarinus_7.0:GL478098:6745:34806:-1 gene:ENSPMAG00000002755.1 transcript:ENSPMAT00000003019.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 44.2838 bits (103), Expect = 2.375e-6
Identity = 31/100 (31.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query:   49 VGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFL----IQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQ 336
            +G++ L ++  T +  KTR +PE F+++K I      +  +WL  IP    TS  +    IQ+  +  A+ +++++ LG LF PK+Y + +L+ ELN  +
Sbjct:  256 LGYSILLMVTCTVYAIKTRGVPEGFNEAKPIGFTMYTTCIIWLIFIPIFFGTSQSVNKLGIQTTTLTIAMSLSASVSLGMLFCPKVY-IVLLRPELNVQK 354

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
Match: grm5a (metabotropic glutamate receptor 5 [Source:NCBI gene;Acc:101173805])

HSP 1 Score: 54.299 bits (129), Expect = 4.544e-9
Identity = 33/108 (30.56%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ L  +F+PK+Y + + K E N
Sbjct:  734 VHLICNLTTLGVVAPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALCCMFVPKVY-IMLAKPEKN 837

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
Match: grm1a (glutamate metabotropic receptor 1 [Source:NCBI gene;Acc:101165118])

HSP 1 Score: 54.299 bits (129), Expect = 4.902e-9
Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L ++  TY+ FKTR +P NF+++K I      +  +WL+ +P    +   +I ++   F+V ++ T+ L  +F PK+Y + I K E N
Sbjct:  748 VYLICNTSNVGMVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSDYKIITTS---FSVSLSVTVALSCMFTPKMY-IIIAKPERN 851

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
Match: grm2a (glutamate metabotropic receptor 2 [Source:NCBI gene;Acc:101169193])

HSP 1 Score: 53.5286 bits (127), Expect = 6.826e-9
Identity = 31/102 (30.39%), Postives = 58/102 (56.86%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSS-FLIQSALILFAVFVNSTLVLGTLFIPKIYALF 306
            V + CN       + + +N + +++ T + FKTRK PENF+++K I      +  +WL+  P    T+S + +Q+  +  +V ++ ++VLG LF PKI+ + 
Sbjct:  708 VTLKCNNRDSSMLLSLTYNCILIILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFQPIFYVTASDYRVQTTTMCISVSLSGSVVLGCLFAPKIHIIL 809

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
Match: grm5b (glutamate metabotropic receptor 5 [Source:NCBI gene;Acc:101164491])

HSP 1 Score: 53.5286 bits (127), Expect = 7.895e-9
Identity = 33/108 (30.56%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ L  +F+PK+Y + + K E N
Sbjct:  746 VNLICNTTNLGVVAPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALCCMFVPKVY-IILAKPERN 849

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
Match: grm5b (glutamate metabotropic receptor 5 [Source:NCBI gene;Acc:101164491])

HSP 1 Score: 53.5286 bits (127), Expect = 8.751e-9
Identity = 33/108 (30.56%), Postives = 62/108 (57.41%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELN 327
            V ++CN        P+G+N L +L  T++ FKTR +P NF+++K I      +  +WL+ +P    ++  +I    + F+V +++T+ L  +F+PK+Y + + K E N
Sbjct:  724 VNLICNTTNLGVVAPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIIT---MCFSVSLSATVALCCMFVPKVY-IILAKPERN 827

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Planmine SMEST
Match: SMESG000064459.1 (SMESG000064459.1)

HSP 1 Score: 213.001 bits (541), Expect = 1.632e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

Query:    1 YVEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQTLHNTVEVSAR 369
            YVEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKCIFIFSSCSIFLWLSLIPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQTLHNTVEVSAR
Sbjct:  709 YVEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKCIFIFSSCSIFLWLSLIPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQTLHNTVEVSAR 831

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Planmine SMEST
Match: SMESG000064049.1 (SMESG000064049.1)

HSP 1 Score: 48.521 bits (114), Expect = 3.323e-7
Identity = 34/121 (28.10%), Postives = 66/121 (54.55%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQTLHNTVEVSA 366
            V ++CN +    +I +G++ + +   T++ FKTR LPENF+++K I      +  +W+ L+   L+T+   ++   + FA+   +T+ +  LF+PK+Y + + K E N       T E+  
Sbjct:  566 VRLICNTESQDLFISMGFDAVLVCFCTWYAFKTRNLPENFNEAKFIGFTMYTTCIIWIGLVVIYLSTN---LKEISLCFAMHFTATICIVFLFLPKLY-IILFKPERNERSAFTTTTEIRC 682

[Close]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Planmine SMEST
Match: SMESG000064054.1 (SMESG000064054.1)

HSP 1 Score: 47.7506 bits (112), Expect = 4.861e-7
Identity = 34/122 (27.87%), Postives = 64/122 (52.46%), Query Frame = 1

Query:    4 VEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKXXXXXXXXXXXXXXXXXPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYALFILKEELNYNQTLHNTVEVSAR 369
            V ++CN       I +G++ + +   T++ FKTR LPENF+++K I      +  +W+ L+   L+T    +Q   + FA+ + +T+ +  LF+PK+Y + + + E N       T E+   
Sbjct:  232 VYLICNTPSSSLMISMGFDAVLIAFCTWYAFKTRNLPENFNEAKFIGFTMYTTCIIWIGLVVIYLSTD---LQVISLCFAIDLTATICIILLFLPKVY-IILFRPEKNERSAFTTTTEIQCH 349

The following BLAST results are available for this feature:

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Human
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Celegans
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Fly
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Zebrafish
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Mouse
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Sea Lamprey
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Yeast
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Nematostella
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Planmine SMEST

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
GRM5	1.620e-9	31.48	glutamate metabotropic receptor 5 [Source:HGNC Sym...	[more]
GRM5	1.815e-9	31.48	glutamate metabotropic receptor 5 [Source:HGNC Sym...	[more]
GRM5	1.815e-9	31.48	glutamate metabotropic receptor 5 [Source:HGNC Sym...	[more]
GRM1	2.380e-9	33.33	glutamate metabotropic receptor 1 [Source:HGNC Sym...	[more]
GRM1	2.380e-9	33.33	glutamate metabotropic receptor 1 [Source:HGNC Sym...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mgl-2	9.522e-8	29.13	Metabotropic GLutamate receptor family [Source:Un...	[more]
mgl-2	1.013e-7	29.13	Metabotropic GLutamate receptor family [Source:Un...	[more]
mgl-2	1.170e-7	29.13	Metabotropic GLutamate receptor family [Source:Un...	[more]
mgl-3	8.860e-7	31.96	Metabotropic GLutamate receptor family [Source:Un...	[more]
mgl-3	8.860e-7	31.96	Metabotropic GLutamate receptor family [Source:Un...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
grm1a	8.145e-10	32.41	glutamate receptor, metabotropic 1a [Source:ZFIN;A...	[more]
grm1a	8.149e-10	32.41	glutamate receptor, metabotropic 1a [Source:ZFIN;A...	[more]
grm1b	1.142e-9	33.33	glutamate receptor, metabotropic 1b [Source:ZFIN;A...	[more]
grm1b	1.142e-9	33.33	glutamate receptor, metabotropic 1b [Source:ZFIN;A...	[more]
grm5b	1.872e-9	29.63	glutamate receptor, metabotropic 5b [Source:ZFIN;A...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
GRM5	6.774e-10	31.48	glutamate receptor, metabotropic 5 [Source:NCBI ge...	[more]
GRM1	6.901e-10	33.33	glutamate receptor, metabotropic 1 [Source:NCBI ge...	[more]
GRM5	7.029e-10	31.48	glutamate receptor, metabotropic 5 [Source:NCBI ge...	[more]
GRM5	7.097e-10	31.48	glutamate receptor, metabotropic 5 [Source:NCBI ge...	[more]
GRM5	7.453e-10	31.48	glutamate receptor, metabotropic 5 [Source:NCBI ge...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Grm1	6.971e-10	34.26	glutamate receptor, metabotropic 1 [Source:MGI Sym...	[more]
Grm1	6.971e-10	34.26	glutamate receptor, metabotropic 1 [Source:MGI Sym...	[more]
Grm5	9.528e-10	31.48	glutamate receptor, metabotropic 5 [Source:MGI Sym...	[more]
Grm5	1.068e-9	31.48	glutamate receptor, metabotropic 5 [Source:MGI Sym...	[more]
Grm5	1.068e-9	31.48	glutamate receptor, metabotropic 5 [Source:MGI Sym...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P23385\|GRM1_RAT	4.318e-9	34.26	Metabotropic glutamate receptor 1 OS=Rattus norveg...	[more]
sp\|P31424\|GRM5_RAT	6.665e-9	31.48	Metabotropic glutamate receptor 5 OS=Rattus norveg...	[more]
sp\|Q3UVX5\|GRM5_MOUSE	6.665e-9	31.48	Metabotropic glutamate receptor 5 OS=Mus musculus ...	[more]
sp\|P41594\|GRM5_HUMAN	7.780e-9	31.48	Metabotropic glutamate receptor 5 OS=Homo sapiens ...	[more]
sp\|Q13255\|GRM1_HUMAN	1.143e-8	33.33	Metabotropic glutamate receptor 1 OS=Homo sapiens ...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8JG12	1.760e-9	35.51	G_PROTEIN_RECEP_F3_4 domain-containing protein OS=...	[more]
A0A1I8HVG3	3.224e-9	34.58	G_PROTEIN_RECEP_F3_4 domain-containing protein OS=...	[more]
A0A1I8HDN7	3.243e-9	34.58	G_PROTEIN_RECEP_F3_4 domain-containing protein OS=...	[more]
A0A0L8FPT1	4.774e-9	33.33	G_PROTEIN_RECEP_F3_4 domain-containing protein (Fr...	[more]
W4YWK5	6.602e-9	32.82	G_PROTEIN_RECEP_F3_4 domain-containing protein OS=...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
grm1a	4.737e-10	32.41	glutamate receptor, metabotropic 1a [Source:ZFIN;A...	[more]
grm1b	1.026e-9	33.33	glutamate receptor, metabotropic 1b [Source:ZFIN;A...	[more]
grm2a	1.518e-9	30.39	metabotropic glutamate receptor 2 [Source:NCBI gen...	[more]
grm5b	1.528e-9	29.63	metabotropic glutamate receptor 5 [Source:NCBI gen...	[more]
grm2b	3.180e-9	30.39	metabotropic glutamate receptor 2-like [Source:NCB...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSPMAT00000004832.1	1.143e-11	33.33	pep scaffold:Pmarinus_7.0:GL494148:1537:3056:-1 ge...	[more]
ENSPMAT00000003019.1	2.375e-6	31.00	pep scaffold:Pmarinus_7.0:GL478098:6745:34806:-1 g...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
grm5a	4.544e-9	30.56	metabotropic glutamate receptor 5 [Source:NCBI gen...	[more]
grm1a	4.902e-9	31.48	glutamate metabotropic receptor 1 [Source:NCBI gen...	[more]
grm2a	6.826e-9	30.39	glutamate metabotropic receptor 2 [Source:NCBI gen...	[more]
grm5b	7.895e-9	30.56	glutamate metabotropic receptor 5 [Source:NCBI gen...	[more]
grm5b	8.751e-9	30.56	glutamate metabotropic receptor 5 [Source:NCBI gen...	[more]

BLAST of G_PROTEIN_RECEP_F3_4 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000064459.1	1.632e-65	100.00	SMESG000064459.1	[more]
SMESG000064049.1	3.323e-7	28.10	SMESG000064049.1	[more]
SMESG000064054.1	4.861e-7	27.87	SMESG000064054.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30033858 ID=SMED30033858|Name=G_PROTEIN_RECEP_F3_4 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=420bp
TACGTGGAAATGGTATGCAATCGAGACATTCCTCGATTCTGGATTCCGGT
CGGTTGGAACTGGCTGAAATTACTGATATCAACATATTGGGGTTTTAAAA
CTAGAAAACTACCAGAAAATTTTCATGACTCCAAATGTATTTTCATATTT
TCATCATGTTCAATATTTCTTTGGCTAAGTCTCATTCCATCGATATTGGC
GACCTCTTCATTTCTTATTCAATCAGCTCTGATTTTATTTGCCGTATTTG
TTAATTCGACACTAGTTTTAGGAACACTTTTTATTCCAAAGATTTATGCT
TTGTTTATTTTGAAAGAGGAACTCAATTACAATCAAACACTCCACAATAC
TGTTGAAGTTTCGGCCCGTTGAAAATTCTTTTCGTTTTCGGAAACTGTTT
TTGTGTGAAAATCAATCAAG

protein sequence of SMED30033858-orf-1

>SMED30033858-orf-1 ID=SMED30033858-orf-1|Name=SMED30033858-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=124bp
YVEMVCNRDIPRFWIPVGWNWLKLLISTYWGFKTRKLPENFHDSKCIFIF
SSCSIFLWLSLIPSILATSSFLIQSALILFAVFVNSTLVLGTLFIPKIYA
LFILKEELNYNQTLHNTVEVSAR*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000418	head

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C

Vocabulary: **molecular function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **cellular component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Vocabulary: **biological process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 19..42 score: 37.89 coord: 42..63 score: 24.43
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 5..99 e-value: 3.6E-17 score: 62.9
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 1..117 score: 15.972
None	No IPR available	PANTHER	PTHR24060	METABOTROPIC GLUTAMATE RECEPTOR	coord: 2..109
None	No IPR available	PANTHER	PTHR24060:SF30	METABOTROPIC GLUTAMATE RECEPTOR 5	coord: 2..109
None	No IPR available	CDD	cd13953	7tm_classC_mGluR-like	coord: 1..102 e-value: 7.30178E-19 score: 76.8917
None	No IPR available	TMHMM	TMhelix		coord: 76..95
None	No IPR available	TMHMM	TMhelix		coord: 47..69
None	No IPR available	TMHMM	TMhelix		coord: 13..32

Main menu

G_PROTEIN_RECEP_F3_4 domain-containing protein

Zeng et. al., 2018

▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Owlery

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