Translation initiation factor SUI1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30033763 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1 (eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249]) HSP 1 Score: 120.168 bits (300), Expect = 2.715e-35 Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQ----LDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF*FILNVNKCLF 428 +IQNL S DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ L+ D +KVHGF N+ C+ Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF---KNLTACIM 121
BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1 (eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249]) HSP 1 Score: 119.398 bits (298), Expect = 3.993e-35 Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQ----LDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNL S DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ L+ D +KVHGF Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1B (eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]) HSP 1 Score: 117.857 bits (294), Expect = 1.667e-34 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQS DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ + ++ +KVHGF Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1 (eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249]) HSP 1 Score: 55.8398 bits (133), Expect = 5.414e-11 Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 216 YDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLIS-SSLST 368 YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ SS++T Sbjct: 2 YDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEVSSVTT 53
BLAST of Translation initiation factor SUI1 vs. Ensembl Celegans
Match: eif-1 (Eukaryotic Initiation Factor [Source:UniProtKB/TrEMBL;Acc:Q967F1]) HSP 1 Score: 112.079 bits (279), Expect = 1.052e-32 Identity = 57/109 (52.29%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 72 MSIQNL-QSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSI NL + D F + + V HIRIQQR GRKTITTVQGI +YD +I++ KK+ CNGTIV+H EYGE++QL GDQR K+ DFLI + + +VHGF Sbjct: 1 MSIANLNRPADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQYLKKKHSCNGTIVEHPEYGEVIQLTGDQRDKVKDFLIKVGIVNESNCRVHGF 109
BLAST of Translation initiation factor SUI1 vs. Ensembl Fly
Match: eIF1 (gene:FBgn0035423 transcript:FBtr0073044) HSP 1 Score: 133.65 bits (335), Expect = 4.619e-41 Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQ--VIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNL ++DPFAD+ +D Q ++HIRIQQRNGRKT+TTVQG+ +YD KI+++ KK+F CNGT+++H EYGE+LQLQGDQR+ I +L L+ D +KVHGF Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1109]) HSP 1 Score: 115.931 bits (289), Expect = 5.159e-34 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQS DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ ++ ++ +KVHGF Sbjct: 3 NIQNLQSFDPFADATKGDDLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1109]) HSP 1 Score: 115.931 bits (289), Expect = 5.159e-34 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQS DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ ++ ++ +KVHGF Sbjct: 3 NIQNLQSFDPFADATKGDDLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Match: eif1 (eukaryotic translation initiation factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-956]) HSP 1 Score: 115.931 bits (289), Expect = 6.347e-34 Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLD----QVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQ+ DPFAD+ IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL L+ ++ +KVHGF Sbjct: 3 AIQNLQTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLTDIELAKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1 (eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:448694]) HSP 1 Score: 117.472 bits (293), Expect = 1.840e-34 Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLDQV----NDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQ DPFA++ + IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+V+H EYGE++QLQGDQR+ FL L+ +D +KVHGF Sbjct: 3 AIQNLQPFDPFANASTGGIWLPAGSEDSIHIRIQQRNGRKTLTTVQGIADAYDKKKLVKAFKKKFACNGTVVEHPEYGEVIQLQGDQRKNACQFLTEVGLAKEDQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:394611]) HSP 1 Score: 116.316 bits (290), Expect = 5.358e-34 Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 SIQNL S DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ + ++ +KVHGF Sbjct: 3 SIQNLNSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLMEIGIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:394611]) HSP 1 Score: 105.145 bits (261), Expect = 1.319e-29 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 99 DPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +PFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ + ++ +KVHGF Sbjct: 9 NPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLMEIGIVKEEQLKVHGF 111
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1 (eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:448694]) HSP 1 Score: 104.76 bits (260), Expect = 2.141e-29 Identity = 56/95 (58.95%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLDQV----NDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFL 347 +IQNLQ DPFA++ + IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+V+H EYGE++QLQGDQR+ FL Sbjct: 3 AIQNLQPFDPFANASTGGIWLPAGSEDSIHIRIQQRNGRKTLTTVQGIADAYDKKKLVKAFKKKFACNGTVVEHPEYGEVIQLQGDQRKNACQFL 97
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:394611]) HSP 1 Score: 103.99 bits (258), Expect = 4.058e-29 Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 3 Query: 84 NLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISS-SLSTQDFVKVHGF 395 NL+S DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ + ++ +KVHGF Sbjct: 6 NLKS-DPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLMEVIGIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1 (eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125]) HSP 1 Score: 119.783 bits (299), Expect = 1.954e-35 Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQ----LDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNL S DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FLI L+ D +KVHGF Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1b (eukaryotic translation initiation factor 1B [Source:MGI Symbol;Acc:MGI:1916219]) HSP 1 Score: 117.857 bits (294), Expect = 1.145e-34 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQS DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ + ++ +KVHGF Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1b (eukaryotic translation initiation factor 1B [Source:MGI Symbol;Acc:MGI:1916219]) HSP 1 Score: 107.457 bits (267), Expect = 8.056e-31 Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLI 350 +IQNLQS DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLL 98
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1 (eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125]) HSP 1 Score: 94.3597 bits (233), Expect = 8.796e-26 Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 3 Query: 147 IHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLS 365 IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FLI SL Sbjct: 7 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEVSLG 79
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1 (eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125]) HSP 1 Score: 75.8702 bits (185), Expect = 2.527e-18 Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 93 SKDPFADSQ----LDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEY 293 + DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EY Sbjct: 40 ASDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEY 110
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|Q755R1|SUI1_ASHGO (Protein translation factor SUI1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SUI1A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.941e-40 Identity = 64/108 (59.26%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSI+NL+S DPFAD+ D+ + S IHIRIQQRNGRKT+TTVQGI E+YD +ILK +K F CNG +VK +E GEI+QLQGDQR K+ +FLI+ + +K+HGF Sbjct: 1 MSIENLKSFDPFADTGDDEASSSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFGCNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|P32911|SUI1_YEAST (Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SUI1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.072e-40 Identity = 65/108 (60.19%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSI+NL+S DPFAD+ D+ S IHIRIQQRNGRKT+TTVQG+ E+YD +ILK KK F CNG IVK E GEI+QLQGDQR K+ +F+IS + +K+HGF Sbjct: 1 MSIENLKSFDPFADTGDDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|Q9VZS3|ETIF1_DROME (Eukaryotic translation initiation factor eIF1 OS=Drosophila melanogaster OX=7227 GN=eIF1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.630e-40 Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQ--VIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNL ++DPFAD+ +D Q ++HIRIQQRNGRKT+TTVQG+ +YD KI+++ KK+F CNGT+++H EYGE+LQLQGDQR+ I +L L+ D +KVHGF Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|P42678|ETIF1_ANOGA (Eukaryotic translation initiation factor eIF1 OS=Anopheles gambiae OX=7165 GN=eIF1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.257e-39 Identity = 63/110 (57.27%), Postives = 82/110 (74.55%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQ--VIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNL + DPFAD+ D Q ++HIRIQQRNGRKT+TTVQG+ +YD KI++ KK+F CNGT+++H EYGE+LQLQGDQR+ I +L S L+ + +KVHGF Sbjct: 1 MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|Q94JV4|SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.111e-34 Identity = 52/110 (47.27%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQ--VNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 + +Q + DPFAD+ + + +HIR+QQRNGRK++TTVQG+ ++Y +KILK KK+FCCNGT+V+ E G+++QLQGDQR+ ++ FL+ + L +D +K+HGF Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A1S8WMB1 (Translation initiation factor SUI1 OS=Opisthorchis viverrini OX=6198 GN=X801_08616 PE=4 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.133e-43 Identity = 67/108 (62.04%), Postives = 88/108 (81.48%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MS+QNLQ+ DPFA+ + + ++ + +HIRIQQRNGRKTITTVQG+HEKYDK KILK KK+F CNGT+V HEEYGE++QLQGDQR+ + FL + L+T + +K+HGF Sbjct: 1 MSLQNLQTYDPFAE-EGESTSEGKFVHIRIQQRNGRKTITTVQGLHEKYDKRKILKQCKKEFACNGTVVDHEEYGEVIQLQGDQREHMKKFLCTWKLATPEGIKLHGF 107
BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A4S2ML60 (SUI1 domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_000155 PE=4 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.303e-42 Identity = 66/108 (61.11%), Postives = 88/108 (81.48%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MS+QNLQ+ DPFA+ + + ++ + +HIRIQQRNGRKTITTVQG+H+KYDK KILK KK+F CNGT+V HEEYGE++QLQGDQR+ + FL + L+T + +K+HGF Sbjct: 1 MSLQNLQTYDPFAE-EGESTSEGKFVHIRIQQRNGRKTITTVQGLHDKYDKRKILKQCKKEFACNGTVVDHEEYGEVIQLQGDQREHMKKFLCTWKLATPEGIKLHGF 107
BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A0R3SK57 (SUI1 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS5320 PE=4 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.526e-41 Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 M++QNL++ DPFAD + +HIRIQQRNGRKT+TTVQGI EKYDK +ILK KK FCCNG IV+H++YGE+LQLQGDQR+ I DFL L D +K+HGF Sbjct: 1 MALQNLKTHDPFADEDGETTAGDTTVHIRIQQRNGRKTLTTVQGIPEKYDKKRILKECKKDFCCNGNIVQHDQYGEVLQLQGDQREHIADFLTRYGLVKSDQIKIHGF 108
BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A267GTC3 (SUI1 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig023505g1 PE=4 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.995e-41 Identity = 69/108 (63.89%), Postives = 88/108 (81.48%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNLQ DPFAD + + N+S IHIRIQQRNG+KT+TTVQGI EKYDK KILK KK+F CNGT+V EEYGE++Q+QGDQR++I D+LI + ++ ++ +KVHGF Sbjct: 1 MSIQNLQRYDPFAD-EGNASNESD-IHIRIQQRNGKKTLTTVQGIDEKYDKRKILKYCKKEFACNGTVVSREEYGEVIQMQGDQRERIADWLIRNKIADKEKIKVHGF 106
BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: Q5DGE3 (Protein translation factor SUI1 homolog OS=Schistosoma japonicum OX=6182 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.101e-40 Identity = 67/108 (62.04%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MS QNLQ+ DPFA+ V + +++HIRIQQRNGRKT+TTVQGI EK+DK KILK KK F CNGT+V+HEEYGE+LQ QGDQR + FL +L T + VK+HGF Sbjct: 1 MSFQNLQTYDPFAEEGESNV-EGRLVHIRIQQRNGRKTLTTVQGIPEKFDKRKILKYCKKHFACNGTVVEHEEYGEVLQFQGDQRDNLKSFLCEMNLVTPEEVKLHGF 107
BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:103042273]) HSP 1 Score: 117.857 bits (294), Expect = 9.188e-35 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 3 Query: 75 SIQNLQSKDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 SIQNLQS DPFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ ++ ++ +KVHGF Sbjct: 3 SIQNLQSFDPFADATKGDNLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1 (eukaryotic translation initiation factor 1b-like [Source:NCBI gene;Acc:103043673]) HSP 1 Score: 114.39 bits (285), Expect = 2.196e-33 Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLD----QVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNL++ DPFAD+ IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL L+ ++ +KVHGF Sbjct: 3 AIQNLKTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLTDIELAKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:103042273]) HSP 1 Score: 104.76 bits (260), Expect = 1.194e-29 Identity = 58/104 (55.77%), Postives = 76/104 (73.08%), Query Frame = 3 Query: 96 KDPFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 K PFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ ++ ++ +KVHGF Sbjct: 9 KYPFADATKGDNLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 112
BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:103042273]) HSP 1 Score: 104.375 bits (259), Expect = 1.445e-29 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 3 Query: 102 PFADS----QLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 PFAD+ L IHIRIQQRNGRKT+TTVQGI + YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL+ ++ ++ +KVHGF Sbjct: 7 PFADATKGDNLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 108
BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
Match: eif1 (eukaryotic translation initiation factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-956]) HSP 1 Score: 127.487 bits (319), Expect = 2.844e-39 Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLDQVN----DSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQS DPF D+ + + +HIRIQQRNGRKT+T+VQGI + YDK K+++ FKK+F CNGT+++H EYGE++QLQGDQR+ I FL ++ +D +KVHGF Sbjct: 3 AIQNLQSFDPFVDATKGEESLPGGTEDYVHIRIQQRNGRKTLTSVQGIADDYDKKKLVQAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICLFLAEVGIAKEDQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
Match: eif1 (eukaryotic translation initiation factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-956]) HSP 1 Score: 117.472 bits (293), Expect = 2.614e-35 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 3 Query: 75 SIQNLQSKDPFAD-----SQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 + QNLQS DPFAD S L D IHIRIQQRNGRKT+TTVQGI ++YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FL ++ +D +KVHGF Sbjct: 3 AFQNLQSFDPFADAIKGESSLPGGTDDS-IHIRIQQRNGRKTLTTVQGIGDQYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLAEIGIAKEDQIKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Yeast
Match: SUI1 (Translation initiation factor eIF1; component of a complex involved in recognition of the initiator codon; modulates translation accuracy at the initiation phase [Source:SGD;Acc:S000005188]) HSP 1 Score: 134.035 bits (336), Expect = 4.424e-42 Identity = 65/108 (60.19%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSI+NL+S DPFAD+ D+ S IHIRIQQRNGRKT+TTVQG+ E+YD +ILK KK F CNG IVK E GEI+QLQGDQR K+ +F+IS + +K+HGF Sbjct: 1 MSIENLKSFDPFADTGDDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108
BLAST of Translation initiation factor SUI1 vs. Ensembl Nematostella
Match: EDO43611 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RY03]) HSP 1 Score: 117.472 bits (293), Expect = 4.455e-35 Identity = 66/113 (58.41%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 72 MSIQNLQSKDPFAD-SQLDQVNDSQV----IHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNLQ +PF D S+ D +++ V IH+RIQQRNGRKT+TT+QGI ++YDK K++K FKKQF CNGT+V H EYGE +QLQGDQR +FL+ L+ +D +KVHGF Sbjct: 1 MSIQNLQVYNPFEDASKGDGESNTSVQRDVIHVRIQQRNGRKTLTTIQGISDEYDKKKLVKAFKKQFACNGTVVDHPEYGECIQLQGDQRAHAQEFLLQIDLAKKDQIKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
Match: eif1 (eukaryotic translation initiation factor 1b [Source:NCBI gene;Acc:101163413]) HSP 1 Score: 117.087 bits (292), Expect = 1.856e-34 Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLD----QVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 +IQNLQ+ DPFAD+ IHIRIQQRNGRKT+TTVQGI YDK K++K FKK+F CNGT+++H EYGE++QLQGDQR+ I FLI L+ ++ +KVHGF Sbjct: 3 AIQNLQTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIAADYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIDLAKEEQLKVHGF 113
BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
Match: eif1 (eukaryotic translation initiation factor 1b [Source:NCBI gene;Acc:101163413]) HSP 1 Score: 60.077 bits (144), Expect = 1.526e-12 Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 3 Query: 75 SIQNLQSKDPFADSQLDQ----VNDSQVIHIRIQQRNGRKTITTVQGIHEKYD 221 +IQNLQ+ DPFAD+ IHIRIQQRNGRKT+TTVQGI YD Sbjct: 3 AIQNLQTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIAADYD 55
BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Match: SMESG000069225.1 (SMESG000069225.1) HSP 1 Score: 220.705 bits (561), Expect = 1.409e-75 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF Sbjct: 1 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 108
BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Match: SMESG000021046.1 (SMESG000021046.1) HSP 1 Score: 184.882 bits (468), Expect = 1.707e-61 Identity = 82/108 (75.93%), Postives = 99/108 (91.67%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNLQ+KDPFAD + + NDSQVIH+R+QQRNGRKTITTVQGIHEKYDK +ILK+FKK+FCCNGT+VKHEEYGE+LQLQGDQRQK+ DFL +S L+T+D +++HGF Sbjct: 1 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 108
BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Match: SMESG000033176.1 (SMESG000033176.1) HSP 1 Score: 153.68 bits (387), Expect = 3.705e-49 Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 3 Query: 72 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 395 MSIQNLQ+ DPFA+S+ VIH+RIQQRNGRKT+TTVQGI EKYDK +ILK KK+FCCNGTIV HEEYGE++QLQGDQR+ I +FL + L ++ +KVHGF Sbjct: 1 MSIQNLQTFDPFAESEDRDGKSENVIHVRIQQRNGRKTLTTVQGIPEKYDKKRILKVCKKEFCCNGTIVPHEEYGEVMQLQGDQRKNIQEFLTKNKLVAENMIKVHGF 108 The following BLAST results are available for this feature:
BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 4
BLAST of Translation initiation factor SUI1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Translation initiation factor SUI1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Translation initiation factor SUI1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Translation initiation factor SUI1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Translation initiation factor SUI1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30033763 ID=SMED30033763|Name=Translation initiation factor SUI1|organism=Schmidtea mediterranea sexual|type=transcript|length=444bpback to top protein sequence of SMED30033763-orf-1 >SMED30033763-orf-1 ID=SMED30033763-orf-1|Name=SMED30033763-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=109bp MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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