60S ribosomal protein L37

Overview
Name60S ribosomal protein L37
Smed IDSMED30033756
Length (bp)315
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60S ribosomal protein L37 (SMED30033756) t-SNE clustered cells

Violin plots show distribution of expression levels for 60S ribosomal protein L37 (SMED30033756) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 60S ribosomal protein L37 (SMED30033756) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 60S ribosomal protein L37 (SMED30033756) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30033756

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 9

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30033756 SmedASXL_065334SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30033756 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Human
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 56.9954 bits (136), Expect = 7.650e-19
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPK 258
            C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF++GFR G   KPK
Sbjct:   37 CGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK 87

HSP 2 Score: 53.9138 bits (128), Expect = 7.650e-19
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Human
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 54.299 bits (129), Expect = 1.251e-16
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31

HSP 2 Score: 48.9062 bits (115), Expect = 1.251e-16
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFK 231
            C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF+
Sbjct:   37 CGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFR 75
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Human
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 54.6842 bits (130), Expect = 7.238e-11
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Celegans
Match: rpl-37 (60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622])

HSP 1 Score: 53.9138 bits (128), Expect = 6.990e-16
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKR 33

HSP 2 Score: 45.4394 bits (106), Expect = 6.990e-16
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPK 258
             ++K  ASC Y +AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR   PK
Sbjct:   29 IQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPK 84
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Celegans
Match: rpl-37 (60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622])

HSP 1 Score: 53.9138 bits (128), Expect = 6.990e-16
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKR 33

HSP 2 Score: 45.4394 bits (106), Expect = 6.990e-16
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPK 258
             ++K  ASC Y +AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR   PK
Sbjct:   29 IQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPK 84
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Celegans
Match: rpl-37 (60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622])

HSP 1 Score: 53.9138 bits (128), Expect = 6.990e-16
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKR 33

HSP 2 Score: 45.4394 bits (106), Expect = 6.990e-16
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPK 258
             ++K  ASC Y +AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR   PK
Sbjct:   29 IQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPK 84
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Celegans
Match: W01D2.1 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:O62388])

HSP 1 Score: 55.0694 bits (131), Expect = 3.478e-11
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKXCILRLP 125
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+      P
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYP 40

HSP 2 Score: 48.9062 bits (115), Expect = 7.855e-9
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKA 261
             ++K  ASC YP+AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR G   KP+A
Sbjct:   29 IQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFREGTTPKPRA 88
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Celegans
Match: W01D2.1 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:O62388])

HSP 1 Score: 55.0694 bits (131), Expect = 3.478e-11
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKXCILRLP 125
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+      P
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYP 40

HSP 2 Score: 48.9062 bits (115), Expect = 7.855e-9
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKA 261
             ++K  ASC YP+AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR G   KP+A
Sbjct:   29 IQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFREGTTPKPRA 88
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Fly
Match: RpL37a (gene:FBgn0030616 transcript:FBtr0074027)

HSP 1 Score: 67.781 bits (164), Expect = 7.816e-25
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPK 258
            A C YP AK+R +NWS KA+ R+TTGTGR  HL+ V RRF+NGFR G   KPK
Sbjct:   35 AQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPK 87

HSP 2 Score: 62.3882 bits (150), Expect = 7.816e-25
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQK
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Fly
Match: RpL37a (gene:FBgn0030616 transcript:FBtr0330403)

HSP 1 Score: 67.781 bits (164), Expect = 7.816e-25
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPK 258
            A C YP AK+R +NWS KA+ R+TTGTGR  HL+ V RRF+NGFR G   KPK
Sbjct:   35 AQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPK 87

HSP 2 Score: 62.3882 bits (150), Expect = 7.816e-25
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQK
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Fly
Match: RpL37b (gene:FBgn0034822 transcript:FBtr0071978)

HSP 1 Score: 62.003 bits (149), Expect = 6.522e-14
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGTTSFGKRHNKTHT CRRCG SSYH+QK K
Sbjct:    1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSK 33

HSP 2 Score: 60.077 bits (144), Expect = 4.501e-13
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 1 
Query:   76 NPHIIFKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
            N     ++   + C YP AK R FNWS KA+GR+  GTGR  +L+++ RRF+NG R G
Sbjct:   24 NSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREG 81
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Zebrafish
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 56.9954 bits (136), Expect = 3.313e-19
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
            C YP  + R +NWS KA+ R TTGTGR  H++ V RRF+NGFR G
Sbjct:   37 CGYPAKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREG 81

HSP 2 Score: 54.299 bits (129), Expect = 3.313e-19
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Zebrafish
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 56.9954 bits (136), Expect = 3.313e-19
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
            C YP  + R +NWS KA+ R TTGTGR  H++ V RRF+NGFR G
Sbjct:   37 CGYPAKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREG 81

HSP 2 Score: 54.299 bits (129), Expect = 3.313e-19
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Xenopus
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:100135133])

HSP 1 Score: 60.8474 bits (146), Expect = 4.087e-20
Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPK 258
            C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRFKNGFR G   KPK
Sbjct:   37 CGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFKNGFREGTTPKPK 87

HSP 2 Score: 54.299 bits (129), Expect = 4.087e-20
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Xenopus
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:100135133])

HSP 1 Score: 51.9878 bits (123), Expect = 1.964e-16
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 
Query:    9 TKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            TKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 30

HSP 2 Score: 50.447 bits (119), Expect = 1.964e-16
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKN 234
            C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRFK+
Sbjct:   36 CGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFKS 75
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Xenopus
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:100135133])

HSP 1 Score: 51.6026 bits (122), Expect = 2.739e-16
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 
Query:    9 TKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            TKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    3 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 32

HSP 2 Score: 50.447 bits (119), Expect = 2.739e-16
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGF 240
             ++     C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF + F
Sbjct:   30 LQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFNSTF 79
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Mouse
Match: Rpl37 (ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531])

HSP 1 Score: 56.9954 bits (136), Expect = 5.202e-19
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPK 258
            C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF++GFR G   KPK
Sbjct:   37 CGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK 87

HSP 2 Score: 53.9138 bits (128), Expect = 5.202e-19
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|O44125|RL37_SCHMA (60S ribosomal protein L37 OS=Schistosoma mansoni OX=6183 GN=RPL37 PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 6.437e-25
Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPK 258
             ++K  +SC YP A++R +NWS KA+ RRTTGTGR  HL+ VHRRFK GFR+G PK
Sbjct:   29 IQKKTCSSCGYPSARLRKYNWSEKAKRRRTTGTGRMLHLKRVHRRFKQGFRSGPPK 84

HSP 2 Score: 59.6918 bits (143), Expect = 6.437e-25
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKK 101
            MTKGTTSFGKRHNK+HT CRRCG+ SYHIQKK
Sbjct:    1 MTKGTTSFGKRHNKSHTQCRRCGRKSYHIQKK 32
[Close]
BLAST of 60S ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|Q9C0T1|RL37_EMENI (60S ribosomal protein L37 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rpl37 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.369e-24
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKA 261
            A+C YP AK R +NWS KA+ R+TTG+GR +HLR VHRRFKNGF+ G PK 
Sbjct:   35 ANCGYPAAKTRKYNWSEKAKRRKTTGSGRTAHLRDVHRRFKNGFQVGTPKG 85

HSP 2 Score: 59.6918 bits (143), Expect = 1.369e-24
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKRHNKTHT CRRCG+ SYHIQK
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRRSYHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|Q9VXX8|RL371_DROME (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37a PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.772e-24
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPK 258
            A C YP AK+R +NWS KA+ R+TTGTGR  HL+ V RRF+NGFR G   KPK
Sbjct:   35 AQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPK 87

HSP 2 Score: 62.3882 bits (150), Expect = 7.772e-24
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQK
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|Q962S7|RL37_SPOFR (60S ribosomal protein L37 OS=Spodoptera frugiperda OX=7108 GN=RpL37 PE=3 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 4.274e-23
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKP 255
            A C YP AK+R ++WS KA+ R+TTGTGR  HL+ V RRF+NGF+ GKP
Sbjct:   35 AQCGYPAAKLRSYHWSVKAKRRKTTGTGRMRHLKIVRRRFRNGFKEGKP 83

HSP 2 Score: 60.4622 bits (145), Expect = 4.274e-23
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGT+SFGKR NKTHT CRRCG+SSYHIQK K
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSK 33
[Close]
BLAST of 60S ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|P59289|RL37A_SCHPO (60S ribosomal protein L37-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3703 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.239e-22
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKP 255
             ++   A C YP AK R +NW  KA+ RRTTGTGR S+L+ VHR FKNGFR GKP
Sbjct:   29 IQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRAGKP 83

HSP 2 Score: 54.6842 bits (130), Expect = 1.239e-22
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT SFG RHNK+HT CRRCGK S+HIQK
Sbjct:    1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. TrEMBL
Match: A0A3S3SCC4 (Ribosomal protein L37 OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_07401 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.784e-24
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKP 255
             ++K  ASC YP  +IR +NWS KA+ R+TTGTGR  HL+ VHRRFKNGFR+GKP
Sbjct:   29 IQKKRCASCGYPSRRIRKYNWSEKAKRRKTTGTGRMRHLKLVHRRFKNGFRSGKP 83

HSP 2 Score: 64.3142 bits (155), Expect = 1.784e-24
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQKK+
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKKR 33
[Close]
BLAST of 60S ribosomal protein L37 vs. TrEMBL
Match: A0A0R3TQE8 (Ribosomal protein L37 OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS9762 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.063e-24
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPK 258
             ++K  ASC YP AK+R +NWS KA  RRTTGTGRC HL+SV RRFKNGFR+G+ K
Sbjct:   29 IQKKTCASCGYPSAKMRKYNWSAKALRRRTTGTGRCLHLKSVQRRFKNGFRSGQAK 84

HSP 2 Score: 60.8474 bits (146), Expect = 2.063e-24
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKK 101
            MTKGTTSFGKRHNK+HT CRRCGK SYHIQKK
Sbjct:    1 MTKGTTSFGKRHNKSHTQCRRCGKKSYHIQKK 32
[Close]
BLAST of 60S ribosomal protein L37 vs. TrEMBL
Match: A0A0R3UHJ7 (Ribosomal protein L37 OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS6824 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.634e-24
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKA 261
             ++K  A+C YP AK+R +NWS KA+ R+TTGTGRC HL+SVHRRFK+GFR+G P++
Sbjct:   29 IQKKTCAACGYPSAKMRKYNWSEKARRRKTTGTGRCLHLKSVHRRFKHGFRSGPPRS 85

HSP 2 Score: 60.4622 bits (145), Expect = 4.634e-24
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKK 101
            MTKGTTSFGKRHNKTHT CRRCG+ SYHIQKK
Sbjct:    1 MTKGTTSFGKRHNKTHTQCRRCGRKSYHIQKK 32
[Close]
BLAST of 60S ribosomal protein L37 vs. TrEMBL
Match: A0A087W0I6 (Ribosomal protein L37 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000183700 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.338e-24
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKA 261
             ++K  A+C YP  +IR +NWS KA+ R+TTGTGRC HL++VHRRFK+GFR+G PKA
Sbjct:   29 IQKKTCAACGYPSPRIRKYNWSVKARRRKTTGTGRCLHLKAVHRRFKHGFRSGPPKA 85

HSP 2 Score: 60.4622 bits (145), Expect = 6.338e-24
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKK 101
            MTKGTTSFGKRHNKTHT CRRCG+ SYHIQKK
Sbjct:    1 MTKGTTSFGKRHNKTHTQCRRCGRKSYHIQKK 32
[Close]
BLAST of 60S ribosomal protein L37 vs. TrEMBL
Match: A0A1W0WLN2 (Ribosomal protein L37 OS=Hypsibius dujardini OX=232323 GN=BV898_09755 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.864e-24
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAXDR 270
            A+C YP  +IR +NWS KA+ RRTTGTGR SHLRSV+RRFKNGFR G P    R
Sbjct:   35 AACGYPSTRIRSYNWSVKAKRRRTTGTGRISHLRSVYRRFKNGFREGIPNVEKR 88

HSP 2 Score: 60.8474 bits (146), Expect = 7.864e-24
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFG RHNKTHT CRRCGKSSYHIQK
Sbjct:    1 MTKGTSSFGMRHNKTHTLCRRCGKSSYHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Cavefish
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 57.3806 bits (137), Expect = 1.332e-18
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:  115 CAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
            C YP  + R +NWS KA+ R TTGTGR  H++ V RRF+NGFR G
Sbjct:   37 CGYPSKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREG 81

HSP 2 Score: 51.9878 bits (123), Expect = 1.332e-18
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
             TKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 QTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Cavefish
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 54.299 bits (129), Expect = 2.300e-14
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQK 31

HSP 2 Score: 40.4318 bits (93), Expect = 2.300e-14
Identity = 17/40 (42.50%), Postives = 24/40 (60.00%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLR 210
             ++     C YP  + R +NWS KA+ R TTGTGR  H++
Sbjct:   29 LQKSTCGKCGYPSKRKRKYNWSAKAKRRSTTGTGRMRHMK 68
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Sea Lamprey
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 59.3066 bits (142), Expect = 4.942e-21
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
            A C YP  + R +NWS KA+ R TTGTGR  HL+ V RRF+NGFR G
Sbjct:   35 AKCGYPYKRKRSYNWSVKAKRRNTTGTGRMRHLKVVFRRFRNGFREG 81

HSP 2 Score: 55.8398 bits (133), Expect = 4.942e-21
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YHIQK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGAKAYHIQK 31
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Yeast
Match: RPL37B (Ribosomal 60S subunit protein L37B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; protein abundance increases in response to DNA replication stress; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37B has a paralog, RPL37A, that arose from the whole genome duplication [Source:SGD;Acc:S000002908])

HSP 1 Score: 64.3142 bits (155), Expect = 7.028e-22
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1 
Query:   94 KRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAXD 267
            ++K  +SC YP AK R  NW+ KA+ R TTGTGR  +L+ V RRFKNGF+TG  KA  
Sbjct:   30 QKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGSAKATS 87

HSP 2 Score: 52.7582 bits (125), Expect = 7.028e-22
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKK 101
            M KGT SFGKRHNK+HT C RCG+ S+H+QKK
Sbjct:    1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKK 32
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Yeast
Match: RPL37A (Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication [Source:SGD;Acc:S000004175])

HSP 1 Score: 62.7734 bits (151), Expect = 1.900e-21
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 1 
Query:   94 KRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
            ++K  +SC YP AK R +NW  KA+ R TTGTGR  +L+ V RRFKNGF+TG
Sbjct:   30 QKKTCSSCGYPAAKTRSYNWGAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTG 81

HSP 2 Score: 52.7582 bits (125), Expect = 1.900e-21
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKK 101
            M KGT SFGKRHNK+HT C RCG+ S+H+QKK
Sbjct:    1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKK 32
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Nematostella
Match: EDO38233 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:A7SDI8])

HSP 1 Score: 64.3142 bits (155), Expect = 1.340e-22
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 1 
Query:   91 FKRKNXASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
             ++K  A C +P A++R FNWS KA+ R TTGTGR  HL+ V+RRF+NGF+ G
Sbjct:   29 IQKKRCAGCGFPSARLRKFNWSMKAKRRTTTGTGRMRHLKLVYRRFQNGFQEG 81

HSP 2 Score: 56.9954 bits (136), Expect = 1.340e-22
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKK 104
            MTKGT+SFGKRHNK+HT C RCG+ +YHIQKK+
Sbjct:    1 MTKGTSSFGKRHNKSHTLCVRCGRKAYHIQKKR 33
[Close]
BLAST of 60S ribosomal protein L37 vs. Ensembl Medaka
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:101170032])

HSP 1 Score: 60.4622 bits (145), Expect = 2.572e-20
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:  109 ASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 249
              C YP+ + R +NWS KA+ R TTGTGR  HL+ V+RRF+NGFR G
Sbjct:   35 GKCGYPQKRKRKYNWSAKAKRRNTTGTGRLRHLKVVYRRFRNGFREG 81

HSP 2 Score: 54.299 bits (129), Expect = 2.572e-20
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 3 
Query:    6 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQK 98
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGAKAYHLQK 31
The following BLAST results are available for this feature:
BLAST of 60S ribosomal protein L37 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RPL377.650e-1956.86ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL371.251e-1677.42ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL377.238e-1177.42ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl-376.990e-1672.7360S ribosomal protein L37 [Source:UniProtKB/Swiss... [more]
rpl-376.990e-1672.7360S ribosomal protein L37 [Source:UniProtKB/Swiss... [more]
rpl-376.990e-1672.7360S ribosomal protein L37 [Source:UniProtKB/Swiss... [more]
W01D2.13.478e-1162.50Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
W01D2.13.478e-1162.50Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpL37a7.816e-2562.26gene:FBgn0030616 transcript:FBtr0074027[more]
RpL37a7.816e-2562.26gene:FBgn0030616 transcript:FBtr0330403[more]
RpL37b6.522e-1487.88gene:FBgn0034822 transcript:FBtr0071978[more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl373.313e-1957.78ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
rpl373.313e-1957.78ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl374.087e-2060.78ribosomal protein L37 [Source:NCBI gene;Acc:100135... [more]
rpl371.964e-1676.67ribosomal protein L37 [Source:NCBI gene;Acc:100135... [more]
rpl372.739e-1676.67ribosomal protein L37 [Source:NCBI gene;Acc:100135... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Rpl375.202e-1956.86ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1... [more]
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BLAST of 60S ribosomal protein L37 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|O44125|RL37_SCHMA6.437e-2560.7160S ribosomal protein L37 OS=Schistosoma mansoni O... [more]
sp|Q9C0T1|RL37_EMENI1.369e-2464.7160S ribosomal protein L37 OS=Emericella nidulans (... [more]
sp|Q9VXX8|RL371_DROME7.772e-2462.26Probable 60S ribosomal protein L37-A OS=Drosophila... [more]
sp|Q962S7|RL37_SPOFR4.274e-2361.2260S ribosomal protein L37 OS=Spodoptera frugiperda... [more]
sp|P59289|RL37A_SCHPO1.239e-2260.0060S ribosomal protein L37-A OS=Schizosaccharomyces... [more]
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BLAST of 60S ribosomal protein L37 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3S3SCC41.784e-2463.64Ribosomal protein L37 OS=Dinothrombium tinctorium ... [more]
A0A0R3TQE82.063e-2466.07Ribosomal protein L37 OS=Rodentolepis nana OX=1022... [more]
A0A0R3UHJ74.634e-2461.40Ribosomal protein L37 OS=Mesocestoides corti OX=53... [more]
A0A087W0I66.338e-2461.40Ribosomal protein L37 OS=Echinococcus multilocular... [more]
A0A1W0WLN27.864e-2466.67Ribosomal protein L37 OS=Hypsibius dujardini OX=23... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl371.332e-1857.78ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
RPL372.300e-1477.42ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl374.942e-2159.57ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPL37B7.028e-2255.17Ribosomal 60S subunit protein L37B; required for p... [more]
RPL37A1.900e-2157.69Ribosomal 60S subunit protein L37A; required for p... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO382331.340e-2254.72Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
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BLAST of 60S ribosomal protein L37 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl372.572e-2057.45ribosomal protein L37 [Source:NCBI gene;Acc:101170... [more]
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BLAST of 60S ribosomal protein L37 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30033756 ID=SMED30033756|Name=60S ribosomal protein L37|organism=Schmidtea mediterranea sexual|type=transcript|length=315bp
TAAAAATGACTAAAGGTACTACGTCATTTGGTAAACGTCATAACAAAACC
CATACTTTCTGCAGAAGATGTGGAAAATCCTCATATCATATTCAAAAGAA
AAAATNGTGCATCTTGCGCTTACCCTGAAGCCAAAATTAGACACTTTAAT
TGGTCAACCAAAGCTCAAGGAAGAAGAACTACTGGCACTGGAAGATGCAG
TCATTTGAGAAGTGTTCATCGTCGATTTAAAAACGGATTCCGTACTGGAA
AGCCAAAAGCTAANGACCGCATAATCTTTAAATCAATAAATATTGGAATT
GNNCTTATTTGTTAA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR011331Ribosomal_L37ae/L37e
IPR001569Ribosomal_L37e
IPR018267Ribosomal_L37e_CS
IPR011332Ribosomal_zn-bd
Vocabulary: cellular component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
GO:0019843rRNA binding
GO:0046872metal ion binding
Vocabulary: biological process
TermDefinition
GO:0006412translation
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011331Ribosomal protein L37ae/L37eGENE3DG3DSA:2.20.25.30coord: 1..39
e-value: 1.1E-20
score: 75.1
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 1..39
e-value: 4.0E-20
score: 71.7
NoneNo IPR availablePANTHERPTHR1076860S RIBOSOMAL PROTEIN L37coord: 1..39
NoneNo IPR availablePANTHERPTHR10768:SF19coord: 1..39
NoneNo IPR availablePRODOMPD005132coord: 8..39
e-value: 3.0E-9
score: 142.0
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 3..22
IPR011332Zinc-binding ribosomal proteinSUPERFAMILYSSF57829Zn-binding ribosomal proteinscoord: 1..39