Proteasome subunit beta

Overview
NameProteasome subunit beta
Smed IDSMED30033741
Length (bp)860
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Proteasome subunit beta (SMED30033741) t-SNE clustered cells

Violin plots show distribution of expression levels for Proteasome subunit beta (SMED30033741) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Proteasome subunit beta (SMED30033741) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Proteasome subunit beta (SMED30033741) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30033741

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parenchymal cellSMED30033741SMESG000079631.1 dd_Smed_v4_1669_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30033741SMESG000079631.1 dd_Smed_v4_1669_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB4 (proteasome 20S subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541])

HSP 1 Score: 223.402 bits (568), Expect = 7.284e-72
Identity = 103/223 (46.19%), Postives = 156/223 (69.96%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI  T +P  TGTSV+G+K+  GV+IA+DMLGSYGS+ARF +I R+ +VN++T+LG SGD AD+  L  ++ + +  + L GDG   SP  +HS++ R +Y+RR+KM+PLW++ ++ GY + + FLGY DM GVAYE  + ATG+G +LA P LR+ +EK   +++ EA+  +   ++VLYYRD R+  ++Q+A V + GV + GP   E NW +AH + G+E
Sbjct:   42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSTETNWDIAHMISGFE 264
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB2 (proteasome 20S subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539])

HSP 1 Score: 48.521 bits (114), Expect = 2.747e-6
Identity = 39/143 (27.27%), Postives = 71/143 (49.65%), Query Frame = 2 
Query:  116 VVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGY-HNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKL 535
            ++GI+  D V++ASD + +   +   DD +++ K++   +L   G+  D  Q ++ I++ +    LY   +G+E+SP    +F  R L +      P   + ++AGY  +E P L Y D      +   AA G+G  L +  L
Sbjct:    4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQ---LYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSIL 143
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-7 (Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:P90868])

HSP 1 Score: 128.642 bits (322), Expect = 8.852e-36
Identity = 74/236 (31.36%), Postives = 131/236 (55.51%), Query Frame = 2 
Query:   71 DPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGF--EMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGY--------HNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRD-FVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVN-KDGVRVTGPHFLEANWAVAHDVCGYE 742
            D +  T +PT TGTSV+ ++Y  GV++ +D + SYG MAR+ ++ R  KVN   ++   GD AD++ L ++I+    R  L    F  ++ P  LH ++  +LY +R KM+P+W++ +VAG             PF+G    +G AY+    ATG G  L    + D + +K ++++ EEA+  + ++L++  Y DC A  ++++  V+  +GV +     +  +W++A   C YE
Sbjct:    5 DEVQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWLQNVIE----RQVLLWKRFDQDIGPKALHGYLTSLLYAKRCKMNPVWNTLVVAGVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREEAEAVLRKSLELTLYHDCVADNEFEIGRVDATEGVVLGKEEKIIGDWSIAETNCQYE 236
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-1 (Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:Q966I8])

HSP 1 Score: 48.1358 bits (113), Expect = 2.122e-6
Identity = 49/197 (24.87%), Postives = 92/197 (46.70%), Query Frame = 2 
Query:  101 TTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLH---SFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYA-DMRGVAYEDNAAATGFGKHLAVPKLRDFVEKN--KNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDG 673
            +TGT+++ ++Y  GV++ +D   S GS        ++  +    V+  SG  AD   ++DI K  I   ++     E  P  ++       + LYN R ++    +S +VAG+  E     YA  + G      + A+G G       ++ F++     N+T EE K  + +A+ +  +RD  +    ++A++NK G
Sbjct:   24 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYTMT----ENKPVTIYRSSQIFRQFLYNYREQLS---ASVLVAGWDEELGGQVYAIPIGGFVSRQRSTASGSGSTF----VQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVRLAVINKAG 209
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta7 (gene:FBgn0250746 transcript:FBtr0078805)

HSP 1 Score: 176.022 bits (445), Expect = 1.208e-53
Identity = 97/220 (44.09%), Postives = 138/220 (62.73%), Query Frame = 2 
Query:   83 HTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNE-KPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGY 739
            H+ + +TTGTSV+GI+Y  GV++A+D L SYGSMAR+ +IER+ KVN   +LG SGD AD   +   I +K+  D    D  EM P  L S++ R+LYNRR++M+PL+   +V G  NE  P+L   D+RG +YED   ATGF +HLAVP +R+   K+++ T  EA   I   ++VLYYRD R   +Y + + + +G  V GP  +  NW  A  + GY
Sbjct:   49 HSTASSTTGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENWTFAETIKGY 268
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta7 (gene:FBgn0250746 transcript:FBtr0078806)

HSP 1 Score: 176.022 bits (445), Expect = 1.208e-53
Identity = 97/220 (44.09%), Postives = 138/220 (62.73%), Query Frame = 2 
Query:   83 HTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNE-KPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGY 739
            H+ + +TTGTSV+GI+Y  GV++A+D L SYGSMAR+ +IER+ KVN   +LG SGD AD   +   I +K+  D    D  EM P  L S++ R+LYNRR++M+PL+   +V G  NE  P+L   D+RG +YED   ATGF +HLAVP +R+   K+++ T  EA   I   ++VLYYRD R   +Y + + + +G  V GP  +  NW  A  + GY
Sbjct:   49 HSTASSTTGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENWTFAETIKGY 268
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4 (gene:FBgn0032596 transcript:FBtr0335142)

HSP 1 Score: 48.521 bits (114), Expect = 1.635e-6
Identity = 50/196 (25.51%), Postives = 89/196 (45.41%), Query Frame = 2 
Query:  113 SVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYH-NEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGP 691
            +++GIK  D V++A+D   +   +   +D  ++ KV+ + ++   G+  D  Q ++ I + I   +LY   +G+++SP     F  + L        P      VAGY  N  P L + D    A   N A  G+G   A      +   + N+T+ EA     + +  +  R     + + +A+V+KDGVR   P
Sbjct:    3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNI---ALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYW--HPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDLEP 193
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4 (gene:FBgn0032596 transcript:FBtr0080936)

HSP 1 Score: 48.521 bits (114), Expect = 1.635e-6
Identity = 50/196 (25.51%), Postives = 89/196 (45.41%), Query Frame = 2 
Query:  113 SVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYH-NEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGP 691
            +++GIK  D V++A+D   +   +   +D  ++ KV+ + ++   G+  D  Q ++ I + I   +LY   +G+++SP     F  + L        P      VAGY  N  P L + D    A   N A  G+G   A      +   + N+T+ EA     + +  +  R     + + +A+V+KDGVR   P
Sbjct:    3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNI---ALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYW--HPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDLEP 193
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4R2 (gene:FBgn0031443 transcript:FBtr0077699)

HSP 1 Score: 46.595 bits (109), Expect = 7.350e-6
Identity = 37/136 (27.21%), Postives = 63/136 (46.32%), Query Frame = 2 
Query:  113 SVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLY--GDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHN-EKPFLGYADMRGVAYEDNAAATGFG 511
            +++GIK  D V++ASD + +   +   DD  ++ +++   ++   GD  D  Q +D I + +H   LY    G+ +S      F  + L +          + ++AGY   E P L Y D  G A   N A  G+G
Sbjct:    5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLH---LYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWG 137
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb4 (proteasome 20S subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333])

HSP 1 Score: 238.039 bits (606), Expect = 7.703e-78
Identity = 115/223 (51.57%), Postives = 160/223 (71.75%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI HT +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I RL KVN++T+LG SGD ADY  L  II++ +  + L GDG   +P  +HS++ R++YNRR+KM+PLW++ ++ G++N + FLGY D  GVAYE    ATGFG +LA P +R+ +E  + +T+EEA+  I   LKVLYYRD R+  ++++AIV  DGV + GP   E NW +AH V G+E
Sbjct:   34 PIKHTLNPMVTGTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQYLKQIIEQMVIDEELLGDGHSYTPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVIENKEEITKEEARELIERCLKVLYYRDARSYNRHEIAIVTADGVEIIGPLSSETNWDIAHLVSGFE 256
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb2 (proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353])

HSP 1 Score: 46.9802 bits (110), Expect = 7.101e-6
Identity = 35/140 (25.00%), Postives = 69/140 (49.29%), Query Frame = 2 
Query:  116 VVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGY-HNEKPFLGYADMRGVAYEDNAAATGFGKHLAV 526
            ++GI+  D V++A+D + +   +    D +++ K++   +L   G+  D  Q ++ I++ +    LY   +G+E+SPA   +F  + L +      P   + ++AGY   + P L Y D      +   AA G+G  L +
Sbjct:    4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQ---LYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFAAHGYGAFLTL 140
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: ttc38 (tetratricopeptide repeat domain 38 [Source:Xenbase;Acc:XB-GENE-5833263])

HSP 1 Score: 161.384 bits (407), Expect = 2.294e-48
Identity = 95/220 (43.18%), Postives = 133/220 (60.45%), Query Frame = 2 
Query:   92 SPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIK-EKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIV--AGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I R+ KVN +T+LG SGD ADY  L  +I+ +++        G       L+      L  RR  + P+  S  +  A  H+   FLGY D  GVA+E    ATGFG +LA P LR+  E+   +++EEA+  I   +KVLYYRD R+  ++++A V + GV V GP   E NW +AH + G+E
Sbjct:    1 NPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNESTILGASGDYADYQYLKQVIRPDELALPLRCHPGPLCQAPSLYCEQTEGLAPRRLPIAPIVLSLPLTDASSHS---FLGYVDKLGVAFEAPTIATGFGAYLAQPLLREVTERKATLSKEEARALIERCMKVLYYRDARSYNRFEIATVTESGVEVEGPLSSETNWEIAHLISGFE 217
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: septin4 (septin 4 [Source:Xenbase;Acc:XB-GENE-983580])

HSP 1 Score: 48.521 bits (114), Expect = 2.326e-6
Identity = 44/188 (23.40%), Postives = 93/188 (49.47%), Query Frame = 2 
Query:  122 GIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGY-HNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGV 676
            GI+  D V++A+D + +   +    D++++ K++   +L   G+  D  Q ++ I++ +    LY   +G+E+SP    +F  R L +      P   + ++AGY  ++ P L Y D      +   AA G+G +L +  L  + +   ++T E+A   + + +  L  R   +   + + +++KDG+
Sbjct:    6 GIQGNDFVLVAADTVCANSIIKMKHDVDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQ---LYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHDGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYYK--PDLTREDAVELLKKCIAELQKRFILSLPSFTVRVIDKDGI 188
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb4 (proteasome (prosome, macropain) subunit, beta type 4 [Source:MGI Symbol;Acc:MGI:1098257])

HSP 1 Score: 221.09 bits (562), Expect = 4.200e-71
Identity = 102/223 (45.74%), Postives = 155/223 (69.51%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI  T +P  TGTSV+G+K+  GV+IA+DMLGSYGS+ARF +I R+ +VN +T+LG SGD AD+  L  ++ + +  + L GDG   SP  +HS++ R +Y+RR+KM+PLW++ ++ GY + + FLGY DM GVAYE  + ATG+G +LA P LR+ +EK   +++ EA+  +   ++VLYYRD R+  ++Q+A V + GV + GP   + NW +AH + G+E
Sbjct:   42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAQTNWDIAHMISGFE 264
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb2 (proteasome (prosome, macropain) subunit, beta type 2 [Source:MGI Symbol;Acc:MGI:1347045])

HSP 1 Score: 48.9062 bits (115), Expect = 1.732e-6
Identity = 39/143 (27.27%), Postives = 71/143 (49.65%), Query Frame = 2 
Query:  116 VVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGY-HNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKL 535
            ++GI+  D V++ASD + +   +   DD +++ K++   +L   G+  D  Q ++ I++ +    LY   +G+E+SP    +F  R L +      P   + ++AGY  +E P L Y D      +   AA G+G  L +  L
Sbjct:    4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQ---LYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSIL 143
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P28024|PSB4_XENLA (Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis OX=8355 GN=psmb4 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 3.844e-73
Identity = 108/223 (48.43%), Postives = 153/223 (68.61%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            P+ HT +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I R+ KVN  T+LG SGD ADY  L  +I + +  + L GDG   SP  +HS++ R++YNRR+KM+PLW++ ++ G++N + FLGY D  GVAYE    ATGFG +LA P LR+  E    +++EEA+  +   +KVLYYRD R+  ++++  V + GV V GP   E NW +AH + G+E
Sbjct:   20 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFEITTVTESGVEVEGPLSSETNWEIAHLISGFE 242
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|Q3T108|PSB4_BOVIN (Proteasome subunit beta type-4 OS=Bos taurus OX=9913 GN=PSMB4 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.784e-71
Identity = 103/224 (45.98%), Postives = 156/224 (69.64%), Query Frame = 2 
Query:   71 DPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
             PI  T +P  TGTSV+G+K+  GV+IA+DMLGSYGS+ARF +I R+ +VN++T+LG SGD AD+  L  ++ + +  + L GDG   SP  +HS++ R +Y+RR+KM+PLW++ ++ GY + + FLGY DM GVAYE  + ATG+G +LA P LR+ +EK   +++ EA+  +   ++VLYYRD R+  ++Q+A V + GV + GP   E NW +AH + G+E
Sbjct:   41 SPITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAETNWDIAHMISGFE 264
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P28070|PSB4_HUMAN (Proteasome subunit beta type-4 OS=Homo sapiens OX=9606 GN=PSMB4 PE=1 SV=4)

HSP 1 Score: 223.402 bits (568), Expect = 3.498e-71
Identity = 103/223 (46.19%), Postives = 156/223 (69.96%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI  T +P  TGTSV+G+K+  GV+IA+DMLGSYGS+ARF +I R+ +VN++T+LG SGD AD+  L  ++ + +  + L GDG   SP  +HS++ R +Y+RR+KM+PLW++ ++ GY + + FLGY DM GVAYE  + ATG+G +LA P LR+ +EK   +++ EA+  +   ++VLYYRD R+  ++Q+A V + GV + GP   E NW +AH + G+E
Sbjct:   42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSTETNWDIAHMISGFE 264
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P99026|PSB4_MOUSE (Proteasome subunit beta type-4 OS=Mus musculus OX=10090 GN=Psmb4 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.938e-70
Identity = 102/223 (45.74%), Postives = 155/223 (69.51%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI  T +P  TGTSV+G+K+  GV+IA+DMLGSYGS+ARF +I R+ +VN +T+LG SGD AD+  L  ++ + +  + L GDG   SP  +HS++ R +Y+RR+KM+PLW++ ++ GY + + FLGY DM GVAYE  + ATG+G +LA P LR+ +EK   +++ EA+  +   ++VLYYRD R+  ++Q+A V + GV + GP   + NW +AH + G+E
Sbjct:   42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAQTNWDIAHMISGFE 264
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P34067|PSB4_RAT (Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 3.174e-70
Identity = 102/223 (45.74%), Postives = 155/223 (69.51%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI  T +P  TGTSV+G+K+  GV+IA+DMLGSYGS+ARF +I R+ +VN +T+LG SGD AD+  L  ++ + +  + L+GDG   SP  +HS++ R +Y+RR+KM+PLW++ ++ GY   + FLGY DM GVAYE  + ATG+G +LA P LR+ +EK   +++ EA+  +   ++VLYYRD R+  ++Q+A V + GV + GP   + NW +AH + G+E
Sbjct:   41 PITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNWDIAHMISGFE 263
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A2T7PS28 (Proteasome subunit beta OS=Pomacea canaliculata OX=400727 GN=C0Q70_03211 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.049e-77
Identity = 113/221 (51.13%), Postives = 162/221 (73.30%), Query Frame = 2 
Query:   80 NHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
              T +P  T TSV+GIK+ DGV++A+DMLGSYGS+ARF +  RL  +N  TVLG+SGD AD+  L+ I+++++  +    DGF+ +P+GLHS++ R+LYNRR++ +PLW++YIV G   +KPFLGY +M G+AYE +  A+GFG +LA+P LRD +EKNKN+ E++A   I   +K+L+YRD R+  KY++AIV K G  + GP  +EANW +AH V GYE
Sbjct:   44 QRTLAPAVTTTSVLGIKFKDGVVLAADMLGSYGSLARFRNCSRLLNINQQTVLGSSGDFADFQFLTSIVEQRVIEEECLDDGFKYTPSGLHSWLTRVLYNRRSQFNPLWNTYIVGGMEADKPFLGYVNMIGIAYEADTVASGFGSYLALPMLRDALEKNKNLDEKQAVDVIQRCMKLLFYRDARSFDKYEIAIVTKKGAEIQGPLTVEANWDIAHAVSGYE 264
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A4E0RAT2 (Proteasome subunit beta OS=Fasciola hepatica OX=6192 GN=D915_006108 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.748e-76
Identity = 122/230 (53.04%), Postives = 161/230 (70.00%), Query Frame = 2 
Query:   71 DPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNE-KPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKN-----KNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            D   HT SPT TG SV+GIK++DGVIIA+DML SYGS+AR+ D+ER+  VN  TV+  SGDIADY  L   ++E+ H DSL  DGF +SP  LHS+I R+LYNRR++M+PLW++YIV G  ++ KPFLGY D+ GV++ D+  ATGFG +LA+P LR  +E       + +++E A  AI + ++ LYYRDCRA + YQMA+V   GV V  P  LE NW +A  V GYE
Sbjct:   50 DAKQHTLSPTCTGASVLGIKFSDGVIIAADMLVSYGSLARYLDVERISMVNDNTVMACSGDIADYQLLKRRVEEQTHTDSLLSDGFTLSPRALHSWITRVLYNRRSRMNPLWNTYIVGGLESDGKPFLGYCDLLGVSFSDDCLATGFGMYLALPLLRQRLEDQAGGDPRKLSKENAVQAITDGMRQLYYRDCRAFKTYQMAVVTSSGVEVRSPLQLETNWEIADYVAGYE 279
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: C1BFQ6 (Proteasome subunit beta OS=Oncorhynchus mykiss OX=8022 GN=PSB4 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.252e-75
Identity = 115/223 (51.57%), Postives = 160/223 (71.75%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI HT +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I RL KVN +T+LG SGD ADY  +  II++ +  + L GDG   SP  +HS++ R++YNRR+KM+PLW++ ++ G++N++ FLGY D  GVAYE    ATGFG +LA P +R+ VE    +T++EA+  I   LKVLYYRD R+  ++++AIV K+GV + GP   E NW +AH V G+E
Sbjct:   34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDARSYNRHEIAIVTKEGVEIVGPMSCETNWEIAHMVSGFE 256
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: Q90ZQ5 (Proteasome subunit beta OS=Oncorhynchus mykiss OX=8022 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.366e-75
Identity = 115/223 (51.57%), Postives = 160/223 (71.75%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI HT +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I RL KVN +T+LG SGD ADY  +  II++ +  + L GDG   SP  +HS++ R++YNRR+KM+PLW++ ++ G++N++ FLGY D  GVAYE    ATGFG +LA P +R+ VE    +T++EA+  I   LKVLYYRD R+  ++++AIV K+GV + GP   E NW +AH V G+E
Sbjct:   34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDARSYNRHEIAIVTKEGVEIVGPMSCETNWEIAHMVSGFE 256
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: B5X9D0 (Proteasome subunit beta OS=Salmo salar OX=8030 GN=PSB4 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.523e-75
Identity = 115/223 (51.57%), Postives = 160/223 (71.75%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI HT +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I RL KVN +T+LG SGD ADY  +  II++ +  + L GDG   SP  +HS++ R++YNRR+KM+PLW++ ++ G++N++ FLGY D  GVAYE    ATGFG +LA P +R+ VE    +T++EA+  I   LKVLYYRD R+  ++++AIV K+GV + GP   E NW +AH V G+E
Sbjct:   34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDARSYNRHEIAIVTKEGVEIVGPMSCETNWEIAHMVSGFE 256
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb4 (proteasome 20S subunit beta 4 [Source:NCBI gene;Acc:103028437])

HSP 1 Score: 233.032 bits (593), Expect = 5.053e-76
Identity = 112/223 (50.22%), Postives = 158/223 (70.85%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            PI HT +P  TGTSV+G+K+  GVIIA+DMLGSYGS+ARF +I RL KVN  T+LG SGD ADY  L  II++ +  + L GDG   SP  +HS++ R++YNRR++M+PLW++ ++ G++N + FLGY D  GVAYE    ATGFG +LA P +R+ VE    +T++EA+  I   L+VLYYRD R+  ++++AIV ++GV + GP   E NW +A+ V G+E
Sbjct:   36 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDNTILGASGDYADYQYLKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVVIGGFYNGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKAEITKDEARALIERCLRVLYYRDARSYNRHEIAIVTEEGVEILGPLSSETNWEIANLVSGFE 258
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb2 (proteasome 20S subunit beta 2 [Source:NCBI gene;Acc:103046353])

HSP 1 Score: 46.2098 bits (108), Expect = 9.807e-6
Identity = 36/143 (25.17%), Postives = 71/143 (49.65%), Query Frame = 2 
Query:  116 VVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYG--DGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGY-HNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKL 535
            ++GI+  D V++A+D + +   +    D +++ K++   +L   G+  D  Q ++ I++ +    LY   +G+E+SPA   +F  + L +      P   + ++AGY  ++ P L Y D      +   AA G+G  L +  L
Sbjct:    4 LLGIQGQDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQ---LYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDESDGPGLYYMDHLSALAKAPFAAHGYGAFLTLSIL 143
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Match: psmb4 (proteasome 20S subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333])

HSP 1 Score: 218.009 bits (554), Expect = 3.141e-71
Identity = 104/217 (47.93%), Postives = 151/217 (69.59%), Query Frame = 2 
Query:   92 SPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            +P   G SV+GIK+  GV++A+DMLGSYGS+ARF +I RL  VN  T+LG SGD AD+  L D++++ +  D +  DG   +P  +HS++ R++YNRR+K +PLW++ +V GYH  + FLGY D  GVAYE    ATGFG +LA+P LRD  EKN +M+++EA   +   LK+LYYRD R+  K+++A+V K+G +V  P  LE NW +A+ + G+E
Sbjct:   11 NPMVAGASVLGIKFNGGVLVAADMLGSYGSLARFRNISRLMAVNDKTLLGASGDYADFQYLKDVLEQMVIDDQVLEDGHYYTPKAIHSWLTRVMYNRRSKFNPLWNTIVVGGYHKGESFLGYVDKLGVAYESPVVATGFGAYLALPLLRDEQEKNPDMSQQEAMELMERCLKILYYRDARSYNKFEIAVVTKEGSKVLPPATLETNWDIAYMIKGFE 227
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE4 (Beta 7 subunit of the 20S proteasome [Source:SGD;Acc:S000001946])

HSP 1 Score: 162.54 bits (410), Expect = 3.476e-49
Identity = 96/236 (40.68%), Postives = 142/236 (60.17%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQ----LSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYH-NEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNM---TXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLE------ANWAVAHDVCGY 739
            P+ +T  P  TGTSV+ +KY +GVIIA+D LGSYGS+ RF+ +ERL  V   TV+G SGDI+D       L D++ E  + + L      + P+ +  ++  ++Y RR+KM+PLW++ IVAG   N   FL Y ++ GV Y     ATGFG H+A P LR  V++  ++   T + A+ AI+ A++VLYYRD R+SR + +AI++K+    TG  F +        W  A D+ GY
Sbjct:   30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKN----TGLTFKKNLQVENMKWDFAKDIKGY 261
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE1 (Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle [Source:SGD;Acc:S000000814])

HSP 1 Score: 46.9802 bits (110), Expect = 7.430e-7
Identity = 34/133 (25.56%), Postives = 63/133 (47.37%), Query Frame = 2 
Query:  116 VVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNE--KPFLGYADMRGVAYEDNAAATGF 508
            ++GI+  D VI+AS    + G     D  ++ ++++  T++  +G+  D  Q ++ I+  I   S+  D +E+SP  + SF+ + L        P   + ++ GY  +  KP L   D  G   E    A G+
Sbjct:    4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIRED-YELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGY 135
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PUP1 (Beta 2 subunit of the 20S proteasome; endopeptidase with trypsin-like activity that cleaves after basic residues; synthesized as a proprotein before being proteolytically processed for assembly into 20S particle; human homolog is subunit Z [Source:SGD;Acc:S000005683])

HSP 1 Score: 46.9802 bits (110), Expect = 1.041e-6
Identity = 22/73 (30.14%), Postives = 41/73 (56.16%), Query Frame = 2 
Query:   98 TTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLY 316
            T+TGT++VG+K+ +GV+IA+D   + G +    +  +L +++       +G  AD   ++ +I   I   SLY
Sbjct:   26 TSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLY 98
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO40407 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7S7D6])

HSP 1 Score: 205.297 bits (521), Expect = 1.951e-65
Identity = 103/225 (45.78%), Postives = 153/225 (68.00%), Query Frame = 2 
Query:   68 MDPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            ++P+  T  PTTTGTSV+GIK+  GV++A+D LGSYGS+AR+ +I RL +VN  T++G +GD AD+  +  ++++K+  D+   DG   +P  + S++ R +Y RRTK DPLW+  IV G    + FLG+ D  G+AYE    A+GFG +LA P LRD  EKN NM+EEEA+  ++E LKVL+YRD R+  ++++A++ KDG +V      + NW++A  V GYE
Sbjct:   38 VEPVKRTMYPTTTGTSVLGIKFNGGVLMAADTLGSYGSLARYRNISRLMRVNENTIIGAAGDYADFQYIKSVLEQKVIDDACLADGHGYTPKSIFSWLTRTMYYRRTKFDPLWNQIIVGGIEKGESFLGFVDKIGIAYEAPTLASGFGAYLAQPLLRDAYEKNPNMSEEEARKLLVECLKVLFYRDGRSLNRFEIAVITKDGTKVEEAQSADTNWSIAPMVKGYE 262
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb4 (proteasome 20S subunit beta 4 [Source:NCBI gene;Acc:101169953])

HSP 1 Score: 235.343 bits (599), Expect = 7.243e-77
Identity = 113/223 (50.67%), Postives = 159/223 (71.30%), Query Frame = 2 
Query:   74 PINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            P+ HT +P  TGTSV+G+K+A GVIIA+DMLGSYGS+ARF +I RL KVN  T+LG SGD ADY  L  +I++ +  + L GDG   SP  +HS++ R++YNRR+KM+PLW++ ++ G++N + FLGY D  GVAYE    ATGFG +LA P +R+ VE   ++T++EA+  I   LKVLYYRD R+  ++++AIV + GV + GP   E NW +AH + G+E
Sbjct:   37 PVRHTLNPMVTGTSVLGVKFAGGVIIAADMLGSYGSLARFRNISRLMKVNDNTILGASGDYADYQYLKQVIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVLGGFYNGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKADITKQEARDLIERCLKVLYYRDARSYNRHEIAIVTEQGVEIIGPLSSETNWDIAHLISGFE 259
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BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000079631.1 (SMESG000079631.1)

HSP 1 Score: 439.884 bits (1130), Expect = 3.158e-158
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 2 
Query:   68 MDPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 742
            MDPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTEEEAKLAIIEALKVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE
Sbjct:    1 MDPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTEEEAKLAIIEALKVLYYRDCRASRKYQMAIVNKDGVRVTGPHFLEANWAVAHDVCGYE 225
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BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000067118.1 (SMESG000067118.1)

HSP 1 Score: 47.7506 bits (112), Expect = 2.542e-6
Identity = 50/210 (23.81%), Postives = 93/210 (44.29%), Query Frame = 2 
Query:   89 ASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKKVNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHS--FINRILYNRRTKMDPLWSSYIVAGYHNEKPFLGY-ADMRGVAYEDNAAATGFGKHLAVPKLRDFVEKNKNMTXXXXXXXXXXXXXVLYYRDCRASRKYQMAIVNKDGVR---VTGPHFL 700
            + P + GT++V   +  GV+I +D   S G+       ++L +VN       SG  AD   L+DI+K  +    L+   +    + LH+      + Y+ R   D L +  IVAG+  +K    Y   + G+      + +G G    +  L +   +N +  E    + +     ++  RD  +    ++A++NK+GV+   +T   FL
Sbjct:    5 SKPISMGTTLVAAVFEGGVVIGADSRTSSGTYVSNRVSDKLTQVNEKIYCCRSGSSADTQALTDIVKYNLE---LHSTMYNRPVSVLHAANLFKNMCYDYR---DQLTAGIIVAGFDEDKGGQIYTVPLGGMLKRQTVSCSGSGSTYILGLLDEIYRENMSEEECLKFVTVAVKHAII--RDGSSGGVIRLAVINKEGVKRFVLTEDEFL 206
The following BLAST results are available for this feature:
BLAST of Proteasome subunit beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
PSMB47.284e-7246.19proteasome 20S subunit beta 4 [Source:HGNC Symbol;... [more]
PSMB22.747e-627.27proteasome 20S subunit beta 2 [Source:HGNC Symbol;... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
pbs-78.852e-3631.36Proteasome subunit beta [Source:UniProtKB/TrEMBL;... [more]
pbs-12.122e-624.87Proteasome subunit beta [Source:UniProtKB/TrEMBL;... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Prosbeta71.208e-5344.09gene:FBgn0250746 transcript:FBtr0078805[more]
Prosbeta71.208e-5344.09gene:FBgn0250746 transcript:FBtr0078806[more]
Prosbeta41.635e-625.51gene:FBgn0032596 transcript:FBtr0335142[more]
Prosbeta41.635e-625.51gene:FBgn0032596 transcript:FBtr0080936[more]
Prosbeta4R27.350e-627.21gene:FBgn0031443 transcript:FBtr0077699[more]
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BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
psmb47.703e-7851.57proteasome 20S subunit beta 4 [Source:ZFIN;Acc:ZDB... [more]
psmb27.101e-625.00proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ttc382.294e-4843.18tetratricopeptide repeat domain 38 [Source:Xenbase... [more]
septin42.326e-623.40septin 4 [Source:Xenbase;Acc:XB-GENE-983580][more]
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BLAST of Proteasome subunit beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Psmb44.200e-7145.74proteasome (prosome, macropain) subunit, beta type... [more]
Psmb21.732e-627.27proteasome (prosome, macropain) subunit, beta type... [more]
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BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P28024|PSB4_XENLA3.844e-7348.43Proteasome subunit beta type-4 (Fragment) OS=Xenop... [more]
sp|Q3T108|PSB4_BOVIN1.784e-7145.98Proteasome subunit beta type-4 OS=Bos taurus OX=99... [more]
sp|P28070|PSB4_HUMAN3.498e-7146.19Proteasome subunit beta type-4 OS=Homo sapiens OX=... [more]
sp|P99026|PSB4_MOUSE2.938e-7045.74Proteasome subunit beta type-4 OS=Mus musculus OX=... [more]
sp|P34067|PSB4_RAT3.174e-7045.74Proteasome subunit beta type-4 OS=Rattus norvegicu... [more]
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BLAST of Proteasome subunit beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2T7PS284.049e-7751.13Proteasome subunit beta OS=Pomacea canaliculata OX... [more]
A0A4E0RAT22.748e-7653.04Proteasome subunit beta OS=Fasciola hepatica OX=61... [more]
C1BFQ61.252e-7551.57Proteasome subunit beta OS=Oncorhynchus mykiss OX=... [more]
Q90ZQ51.366e-7551.57Proteasome subunit beta OS=Oncorhynchus mykiss OX=... [more]
B5X9D01.523e-7551.57Proteasome subunit beta OS=Salmo salar OX=8030 GN=... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
psmb45.053e-7650.22proteasome 20S subunit beta 4 [Source:NCBI gene;Ac... [more]
psmb29.807e-625.17proteasome 20S subunit beta 2 [Source:NCBI gene;Ac... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
psmb43.141e-7147.93proteasome 20S subunit beta 4 [Source:ZFIN;Acc:ZDB... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
PRE43.476e-4940.68Beta 7 subunit of the 20S proteasome [Source:SGD;A... [more]
PRE17.430e-725.56Beta 4 subunit of the 20S proteasome; localizes to... [more]
PUP11.041e-630.14Beta 2 subunit of the 20S proteasome; endopeptidas... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO404071.951e-6545.78Proteasome subunit beta type [Source:UniProtKB/Tr... [more]
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BLAST of Proteasome subunit beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
psmb47.243e-7750.67proteasome 20S subunit beta 4 [Source:NCBI gene;Ac... [more]
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BLAST of Proteasome subunit beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000079631.13.158e-158100.00SMESG000079631.1[more]
SMESG000067118.12.542e-623.81SMESG000067118.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30033741 ID=SMED30033741|Name=Proteasome subunit beta|organism=Schmidtea mediterranea sexual|type=transcript|length=860bp
GTTTTAAATTATTGTTTAGAGCGAAATACAAATTTTGTTTAATAATCTTT
AAGTAATTTGTTAAATCATGGATCCTATTAACCACACTGCTTCGCCAACA
ACTACTGGCACTTCTGTAGTTGGTATTAAATATGCAGATGGAGTAATTAT
AGCATCAGATATGCTTGGTTCTTACGGTTCAATGGCTCGATTTGATGACA
TTGAAAGACTCAAAAAAGTTAATAGTACAACTGTTCTTGGTAATAGTGGG
GACATCGCAGACTATTACCAATTATCTGATATTATTAAAGAAAAAATTCA
TCGAGATAGTTTATATGGAGATGGATTCGAAATGTCACCAGCTGGATTAC
ATAGCTTTATAAATCGTATTTTATATAATCGACGAACAAAGATGGATCCA
TTGTGGAGTTCTTACATTGTTGCTGGATACCACAATGAGAAGCCATTTTT
AGGTTACGCTGACATGAGAGGAGTTGCTTATGAAGACAATGCTGCAGCGA
CTGGATTTGGGAAACACCTTGCAGTTCCCAAACTTAGAGATTTCGTTGAA
AAAAATAAGAACATGACTGAAGAAGAAGCCAAACTTGCTATTATTGAAGC
ATTGAAAGTGTTATATTATCGAGATTGTAGAGCAAGCAGAAAATATCAAA
TGGCAATTGTAAATAAAGACGGGGTTCGGGTAACTGGTCCACATTTCTTG
GAAGCCAATTGGGCTGTAGCTCATGATGTTTGTGGATATGAATAAATTAC
TCTTGTTTTATTTTACAAATTTTAATTGATTTACAATAACTTTATATTGA
TTTTATGTTTTAATACATTTAGATAGCAAGAAAGGATTTGTAACTATAAT
GAATTGTTAC
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protein sequence of SMED30033741-orf-1

>SMED30033741-orf-1 ID=SMED30033741-orf-1|Name=SMED30033741-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=226bp
MDPINHTASPTTTGTSVVGIKYADGVIIASDMLGSYGSMARFDDIERLKK
VNSTTVLGNSGDIADYYQLSDIIKEKIHRDSLYGDGFEMSPAGLHSFINR
ILYNRRTKMDPLWSSYIVAGYHNEKPFLGYADMRGVAYEDNAAATGFGKH
LAVPKLRDFVEKNKNMTEEEAKLAIIEALKVLYYRDCRASRKYQMAIVNK
DGVRVTGPHFLEANWAVAHDVCGYE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR016295Proteasome_beta4
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type
IPR001627Semap_dom
Vocabulary: molecular function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0005515protein binding
GO:0008233peptidase activity
GO:0016787hydrolase activity
Vocabulary: cellular component
TermDefinition
GO:0005839proteasome core complex
GO:0000502proteasome complex
GO:0005634nucleus
GO:0005737cytoplasm
Vocabulary: biological process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006508proteolysis
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016295Proteasome subunit beta 4PIRSFPIRSF001213MCPcoord: 1..225
e-value: 1.1E-87
score: 291.1
IPR016295Proteasome subunit beta 4PANTHERPTHR11599:SF5PROTEASOME SUBUNIT BETA TYPE-4coord: 3..213
IPR016295Proteasome subunit beta 4CDDcd03760proteasome_beta_type_4coord: 13..208
e-value: 8.7714E-106
score: 301.412
IPR029055Nucleophile aminohydrolases, N-terminalGENE3DG3DSA:3.60.20.10coord: 7..225
e-value: 3.0E-63
score: 215.2
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILYSSF56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 10..218
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 12..198
e-value: 2.9E-31
score: 108.4
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 3..213
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 18..65
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 14..198
score: 29.974