ATP synthase mitochondrial F1 complex assembly factor 2

Overview


Name	ATP synthase mitochondrial F1 complex assembly factor 2
Smed ID	SMED30033480
Length (bp)	803

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of ATP synthase mitochondrial F1 complex assembly factor 2 (SMED30033480) t-SNE clustered cells

Violin plots show distribution of expression levels for ATP synthase mitochondrial F1 complex assembly factor 2 (SMED30033480) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of ATP synthase mitochondrial F1 complex assembly factor 2 (SMED30033480) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30033480

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
neoblast	SMED30033480	SMESG000057111.1	dd_Smed_v4_2372_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30033480	SMESG000057111.1	Contig40201	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30033480	SMESG000057111.1	Contig40201	uc_Smed_v2	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Human
Match: ATPAF2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802])

HSP 1 Score: 224.557 bits (571), Expect = 2.590e-72
Identity = 108/238 (45.38%), Postives = 154/238 (64.71%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            R Y+     K+FY+NVSI TQ    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT RN + +++  +++LD+DTIC+R  EP  L E+Q   W+P++E+ E+RY V    +  I+ P +P ++R++   +L + N + L G +     LKS+ L + L D  L+VEQAV LSRLE E+Q+ KWGN+ W H+ E  E+  R AA    I+
Sbjct:   38 RAYAPPTERKRFYQNVSI-TQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIH 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Human
Match: ATPAF2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802])

HSP 1 Score: 160.229 bits (404), Expect = 3.117e-48
Identity = 76/168 (45.24%), Postives = 112/168 (66.67%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGL 551
            R Y+     K+FY+NVSI TQ    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT RN + +++  +++LD+DTIC+R  EP  L E+Q   W+P++E+ E+RY V    +  I+ P +P ++R++   +L + N + L
Sbjct:   38 RAYAPPTERKRFYQNVSI-TQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWAL 204

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Celegans
Match: Y116A8C.27 (pep chromosome:WBcel235:IV:17090630:17096286:-1 gene:WBGene00013804.1 transcript:Y116A8C.27a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y116A8C.27)

HSP 1 Score: 126.716 bits (317), Expect = 5.400e-35
Identity = 73/240 (30.42%), Postives = 127/240 (52.92%), Query Frame = 3

Query:   75 KKFYKNVSIATQNVNE-----FQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRK-IFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNH 776
            KKFYK VS+  +          ++LLD +VLKT  G    ++S  LA A+A EW SQ+E ++   M LT L  T+ DNP  +  + + + +L+Y++ DT+ F  TE + L+  Q   W P+++ +     +    ++ I+   +  E+ K   +R++  +N   L G Q+  E++KS  +A     + +  + A+  + LE   Q   WGNV W H +E  E+ TR++A+   +Y + N+
Sbjct:   24 KKFYKEVSVINETDESTGNQIHKVLLDHRVLKTQGGQVLKLDSYPLALAIAEEWSSQDEFLQLGQMRLTGLAFTAQDNPLEQTADTISQKILDYVEGDTVLFFNTESSKLHRYQEEKWAPLIKNLNNDLGIKVRPSENILDCDVASENDKEKIDRWIRQHNFPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAETWGNVEWAHGIEREELMTRLSAACLFVYFNSNN 263

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Celegans
Match: Y116A8C.27 (pep chromosome:WBcel235:IV:17090630:17096268:-1 gene:WBGene00013804.1 transcript:Y116A8C.27a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y116A8C.27)

HSP 1 Score: 126.716 bits (317), Expect = 5.400e-35
Identity = 73/240 (30.42%), Postives = 127/240 (52.92%), Query Frame = 3

Query:   75 KKFYKNVSIATQNVNE-----FQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRK-IFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNH 776
            KKFYK VS+  +          ++LLD +VLKT  G    ++S  LA A+A EW SQ+E ++   M LT L  T+ DNP  +  + + + +L+Y++ DT+ F  TE + L+  Q   W P+++ +     +    ++ I+   +  E+ K   +R++  +N   L G Q+  E++KS  +A     + +  + A+  + LE   Q   WGNV W H +E  E+ TR++A+   +Y + N+
Sbjct:   24 KKFYKEVSVINETDESTGNQIHKVLLDHRVLKTQGGQVLKLDSYPLALAIAEEWSSQDEFLQLGQMRLTGLAFTAQDNPLEQTADTISQKILDYVEGDTVLFFNTESSKLHRYQEEKWAPLIKNLNNDLGIKVRPSENILDCDVASENDKEKIDRWIRQHNFPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAETWGNVEWAHGIEREELMTRLSAACLFVYFNSNN 263

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Celegans
Match: Y116A8C.27 (pep chromosome:WBcel235:IV:17090630:17096248:-1 gene:WBGene00013804.1 transcript:Y116A8C.27b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y116A8C.27)

HSP 1 Score: 88.1965 bits (217), Expect = 3.071e-21
Identity = 48/175 (27.43%), Postives = 91/175 (52.00%), Query Frame = 3

Query:  255 MHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRK-IFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNH 776
            M LT L  T+ DNP  +  + + + +L+Y++ DT+ F  TE + L+  Q   W P+++ +     +    ++ I+   +  E+ K   +R++  +N   L G Q+  E++KS  +A     + +  + A+  + LE   Q   WGNV W H +E  E+ TR++A+   +Y + N+
Sbjct:    1 MRLTGLAFTAQDNPLEQTADTISQKILDYVEGDTVLFFNTESSKLHRYQEEKWAPLIKNLNNDLGIKVRPSENILDCDVASENDKEKIDRWIRQHNFPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAETWGNVEWAHGIEREELMTRLSAACLFVYFNSNN 175

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Fly
Match: l(2)k14505 (gene:FBgn0021856 transcript:FBtr0081482)

HSP 1 Score: 181.03 bits (458), Expect = 1.155e-55
Identity = 93/243 (38.27%), Postives = 152/243 (62.55%), Query Frame = 3

Query:   33 SLFIRRNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            S F  R+Y+S    K+FYK  S+ + + + ++++LD + LKTP G PFI+ SE LA AVA E+D+Q ENI+R  MHL++LC T+IDNP   +   +V  LL ++ +DT+ F+  +  DL ++Q   W+PV+ +  QRY+     T  I  P++  + +    ++  + +   L GF   ++TLKS+ LA A+ + ML+VE+AV L+RLE E+Q+  WG V W H++   E++ R+AA+   ++
Sbjct:   26 SSFTVRHYASPP--KRFYKKTSVLSGD-SGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDLQDLQVNEWDPVIAWFNQRYDTNLQKTMNITPPQVSEQDKMNVAKHFQSYSLETLHGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAAVLFVH 265

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Fly
Match: l(2)k14505 (gene:FBgn0021856 transcript:FBtr0330677)

HSP 1 Score: 181.03 bits (458), Expect = 1.155e-55
Identity = 93/243 (38.27%), Postives = 152/243 (62.55%), Query Frame = 3

Query:   33 SLFIRRNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            S F  R+Y+S    K+FYK  S+ + + + ++++LD + LKTP G PFI+ SE LA AVA E+D+Q ENI+R  MHL++LC T+IDNP   +   +V  LL ++ +DT+ F+  +  DL ++Q   W+PV+ +  QRY+     T  I  P++  + +    ++  + +   L GF   ++TLKS+ LA A+ + ML+VE+AV L+RLE E+Q+  WG V W H++   E++ R+AA+   ++
Sbjct:   26 SSFTVRHYASPP--KRFYKKTSVLSGD-SGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDLQDLQVNEWDPVIAWFNQRYDTNLQKTMNITPPQVSEQDKMNVAKHFQSYSLETLHGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAAVLFVH 265

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Zebrafish
Match: atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18])

HSP 1 Score: 225.713 bits (574), Expect = 6.452e-73
Identity = 111/242 (45.87%), Postives = 160/242 (66.12%), Query Frame = 3

Query:   45 RRNYSSA-KNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTS 767
            +  YSSA    KKFY+ VSI       F+I LD + LKTP+G  F + +E+LA AVA+EWD Q + +K Y+MHLT+LCNT++DNPT R  E ++   L++L++DTIC+R  EP  L E+Q   W+PV+ +IEQRYNV    +  I+ P++P E+++ F ++L + N + LTG +  I  LKS+ L+ AL D  L+VE+AV LSRLE E+Q+  WGNV W H+ +  E+  R AA A  ++ S
Sbjct:   37 KAKYSSATAERKKFYETVSITQGEGGLFEINLDKRKLKTPSGKLFTVPNEALAIAVANEWDVQKDTLKFYTMHLTTLCNTALDNPTQRTKEQMISAALKFLETDTICYRVEEPPGLVELQTNEWDPVMNWIEQRYNVVIGSSSNIMGPQIPEETKETFHQHLNSFNFWSLTGLEFVINQLKSLVLSFALIDRHLNVEEAVLLSRLEEEYQIRSWGNVEWVHDYDMYELRARTAAGALFVHLS 278

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Query:   45 RRNYSSA-KNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTS 767
            +  YSSA    KKFY+ VSI       F+I LD + LKTP+G  F + +E+LA AVA+EWD Q + +K Y+MHLT+LCNT++DNPT R  E ++   L++L++DTIC+R  EP  L E+Q   W+PV+ +IEQRYNV    +  I+ P++P E+++ F ++L + N + LTG +  I  LKS+ L+ AL D  L+VE+AV LSRLE E+Q+  WGNV W H+ +  E+  R AA A  ++ S
Sbjct:   37 KAKYSSATAERKKFYETVSITQGEGGLFEINLDKRKLKTPSGKLFTVPNEALAIAVANEWDVQKDTLKFYTMHLTTLCNTALDNPTQRTKEQMISAALKFLETDTICYRVEEPPGLVELQTNEWDPVMNWIEQRYNVVIGSSSNIMGPQIPEETKETFHQHLNSFNFWSLTGLEFVINQLKSLVLSFALIDRHLNVEEAVLLSRLEEEYQIRSWGNVEWVHDYDMYELRARTAAGALFVHLS 278

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Zebrafish
Match: atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18])

HSP 1 Score: 114.775 bits (286), Expect = 1.695e-31
Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 3

Query:   45 RRNYSSA-KNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEP 380
            +  YSSA    KKFY+ VSI    +  F+I LD + LKTP+G  F + +E+LA AVA+EWD Q + +K Y+MHLT+LCNT++DNPT R  E ++   L++L++DTIC+R  EP
Sbjct:   37 KAKYSSATAERKKFYETVSITQGGL--FEINLDKRKLKTPSGKLFTVPNEALAIAVANEWDVQKDTLKFYTMHLTTLCNTALDNPTQRTKEQMISAALKFLETDTICYRVEEP 147

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Xenopus
Match: atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:NCBI gene;Acc:394633])

HSP 1 Score: 220.705 bits (561), Expect = 6.731e-71
Identity = 107/235 (45.53%), Postives = 155/235 (65.96%), Query Frame = 3

Query:   57 SSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            ++A   KKFY+NVSI +     F+I LD + L+TP G  F   SE+LA AVA EWD Q + IK Y+MHLT+LCNT++DNPT RN E ++   L++L++DT+C+R  EP  L E+Q   W+PV+E+ E+RYNV    +  I  P +P E++ +F R+L + N++GL G +  I  LKS+ L + L D  L VE+AV LSRLE E+Q+ +WGNV W H+ +  E+ +R AA    ++
Sbjct:   29 AAATERKKFYENVSI-SHGEGGFEINLDRRKLRTPQGKIFTAPSEALAVAVATEWDCQRDVIKFYTMHLTTLCNTALDNPTLRNKEQLITAALKFLETDTVCYRVEEPPGLVELQRNEWDPVIEWAEKRYNVVIGSSTSIQGPIIPTETKDVFSRHLASYNSWGLLGIEFIISQLKSLVLTMGLIDRHLPVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLQELRSRTAAGTLFVH 262

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Xenopus
Match: atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:NCBI gene;Acc:394633])

HSP 1 Score: 168.318 bits (425), Expect = 9.065e-51
Identity = 93/235 (39.57%), Postives = 132/235 (56.17%), Query Frame = 3

Query:   57 SSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            ++A   KKFY+NVSI +     F+I LD + L+TP G  F   SE+LA AVA EWD Q + IK Y+MHLT+L                            I +R  EP  L E+Q   W+PV+E+ E+RYNV    +  I  P +P E++ +F R+L + N++GL G +  I  LKS+ L + L D  L VE+AV LSRLE E+Q+ +WGNV W H+ +  E+ +R AA    ++
Sbjct:   29 AAATERKKFYENVSI-SHGEGGFEINLDRRKLRTPQGKIFTAPSEALAVAVATEWDCQRDVIKFYTMHLTTLL-------------------------PCIHYRVEEPPGLVELQRNEWDPVIEWAEKRYNVVIGSSTSIQGPIIPTETKDVFSRHLASYNSWGLLGIEFIISQLKSLVLTMGLIDRHLPVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLQELRSRTAAGTLFVH 237

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Mouse
Match: Atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561])

HSP 1 Score: 219.55 bits (558), Expect = 1.851e-70
Identity = 105/238 (44.12%), Postives = 154/238 (64.71%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            R Y      K+FY+NVSI+ Q    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT R+ + +++  +++LD+DTIC+R  EP  L E+Q   W+PV+E+ E+RY +    +  I+ P +P ++R++   +L + N + L G +  +  LKS+ L + L D  L+VEQAV LSRLE E+Q+ KWGN+ W H+ E  E+  R AA    ++
Sbjct:   38 RAYVPPTERKRFYQNVSIS-QGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTICYRVEEPETLVELQKNEWDPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVH 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Mouse
Match: Atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561])

HSP 1 Score: 219.164 bits (557), Expect = 3.188e-70
Identity = 105/238 (44.12%), Postives = 154/238 (64.71%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            R Y      K+FY+NVSI+ Q    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT R+ + +++  +++LD+DTIC+R  EP  L E+Q   W+PV+E+ E+RY +    +  I+ P +P ++R++   +L + N + L G +  +  LKS+ L + L D  L+VEQAV LSRLE E+Q+ KWGN+ W H+ E  E+  R AA    ++
Sbjct:   47 RAYVPPTERKRFYQNVSIS-QGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTICYRVEEPETLVELQKNEWDPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVH 283

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Mouse
Match: Atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561])

HSP 1 Score: 110.153 bits (274), Expect = 1.066e-29
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICF 365
            R Y      K+FY+NVSI+ Q    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT R+ + +++  +++LD+DTI +
Sbjct:   38 RAYVPPTERKRFYQNVSIS-QGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTIWW 142

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
Match: sp|Q8N5M1|ATPF2_HUMAN (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens OX=9606 GN=ATPAF2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.244e-71
Identity = 108/238 (45.38%), Postives = 154/238 (64.71%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            R Y+     K+FY+NVSI TQ    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT RN + +++  +++LD+DTIC+R  EP  L E+Q   W+P++E+ E+RY V    +  I+ P +P ++R++   +L + N + L G +     LKS+ L + L D  L+VEQAV LSRLE E+Q+ KWGN+ W H+ E  E+  R AA    I+
Sbjct:   38 RAYAPPTERKRFYQNVSI-TQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIH 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
Match: sp|Q1LZ96|ATPF2_BOVIN (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus OX=9913 GN=ATPAF2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.229e-70
Identity = 105/238 (44.12%), Postives = 153/238 (64.29%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            R Y      K+FY+NVSI+ Q    F+I LD + L+TP G  F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT R+ + +++  +++LD+DT+C+R  EP  L E+Q   W+PV+ + E+RY V    +  I  P +P  +R++   +L + N + L G +  +  LKS+ L + LTD  L+VEQAV LSRLE E+Q+ KWGN+ W H+ E  E+  R AA    ++
Sbjct:   38 RAYVPPAERKRFYQNVSIS-QGEGGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQDTIKMYTMHLTTLCNTSLDNPTQRDKDQLIRAAVKFLDTDTVCYRVEEPETLVELQRNEWDPVISWAEKRYGVEIGSSTSITGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLVLTLGLTDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVH 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
Match: sp|Q91YY4|ATPF2_MOUSE (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus OX=10090 GN=Atpaf2 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.295e-69
Identity = 105/238 (44.12%), Postives = 154/238 (64.71%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            R Y      K+FY+NVSI+ Q    F+I LD + LKTP    F + SE+LA AVA EWDSQ + IK Y+MHLT+LCNTS+DNPT R+ + +++  +++LD+DTIC+R  EP  L E+Q   W+PV+E+ E+RY +    +  I+ P +P ++R++   +L + N + L G +  +  LKS+ L + L D  L+VEQAV LSRLE E+Q+ KWGN+ W H+ E  E+  R AA    ++
Sbjct:   38 RAYVPPTERKRFYQNVSIS-QGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTICYRVEEPETLVELQKNEWDPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVH 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
Match: sp|Q9UT16|ATP12_SCHPO (Protein atp12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp12 PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.431e-24
Identity = 69/248 (27.82%), Postives = 128/248 (51.61%), Query Frame = 3

Query:   69 NLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSES--LAHAVAHEWDS-QNENIKRYSMHLTSLCNTSIDNPTGRN--PEVVVKGLLEYLDSDTICFRCTE---PNDLYEMQCAFWNPVLEYIEQRYNVTPVITDG---IVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHH 779
            + ++F+KN +   QN  E  I LD + LK+P+G    +  E   LAH +A EWD   + +++++++ +TSL + +ID    +    E++   L+ +LD+DTI     E      L E Q   W P+ E  E +  V     DG   I+  K   E+ +    +L + N++ L  F+  +   KS  ++  +    L+ E+A  L+ LE ++Q  +WG++   HE++  +++ ++A+SA L    ++ H
Sbjct:   37 SFRRFWKNTATKIQN-GEVLIQLDGRNLKSPSGKIVKVPKEMELLAHLIALEWDRLPSTSVRQHNLPITSLVSRAIDISQFKKEEKELLSTQLIRFLDTDTILIYSPETEYEGKLLEEQKENWWPLKETFENKLGVQLSYLDGDAGIIAHKQTQETHERIRNWLSSLNSWQLAAFERSVSCCKSFIVSFMILKGYLNSEKAAALTNLELQYQTNRWGSLEDAHEIDNEDLKNKLASSAILSRCIEDMH 283

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
Match: sp|P22135|ATP12_YEAST (Protein ATP12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ATP12 PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 4.159e-7
Identity = 67/279 (24.01%), Postives = 124/279 (44.44%), Query Frame = 3

Query:   63 AKNLKKFYKNVSIATQNVNEFQILL--DSKVLKTPNGNPFII-NSESLA--HAVAHEWDSQNENIKRYSMHLTSLCNTSID----NPTGRNPEVVVK----------GLLEYLDSDTICFRCTEPNDLYE-----MQCAFWNPVLEYIEQ-------RYNVTPVITDGIVLPKLPHESRKIFE----RYLLANNNFGLTGFQHCIETLKSVYLAIALTDNM-----------LSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            +K  +KF++ VS+  ++V + +I L  D + +KTP GN  I+ N++SL             + +IK +S+ LTSL    ID    N  G +P++V K           LL YLD+DT+      P + +E      Q   + P+++ +E+         N+   I D  +     ++   I +    +Y+ + + + L   +  + T KS    + L +N              ++  V+ + LE   QV KWG V   H+V+  ++  ++  +A   +
Sbjct:   48 SKTSQKFWEKVSL-NRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLSSLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLL--VFSPMNEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIVKNAAKKYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAATLETIFQVEKWGEVEDTHDVDKRDIRRKIHTAAIAAF 323

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
Match: R7V7B5 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_114697 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.580e-75
Identity = 109/242 (45.04%), Postives = 165/242 (68.18%), Query Frame = 3

Query:   72 LKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYVVSTK 797
            LKKFYKN +I       F++ LD + LKTP GN F + +E LA AVA EW++Q++ IK+Y+MH+T+L NT+IDNPT R  + V+ G+LEYLD+DT+C+R   P +L ++Q   W+ +L +I +RY++    T G  +P +P E+R+IF ++L + N+F L G+Q  +E ++S+++A AL D  +SVE+AV LSRLE + Q  KWGNV W+H+V+  E   R+A++A  +Y + N    V TK
Sbjct:    7 LKKFYKNATITHAEGGGFEVNLDKRKLKTPMGNIFKVPNEGLAMAVAGEWNAQDKIIKKYNMHITALANTAIDNPTHRTRDQVINGILEYLDTDTLCYRVEHPQELVDLQTKEWDAILNWIMERYHIYIEATTGFGVPTVPTETREIFRQHLQSFNDFALVGYQQAVEVVRSIFIAYALIDRHISVEKAVNLSRLELDFQTEKWGNVEWHHDVDLYEYRARLASAALFVYLNSNESRTVFTK 248

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
Match: A0A504YKS0 (ATP synthase mitochondrial F1 complex assembly factor OS=Fasciola gigantica OX=46835 GN=FGIG_03813 PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 2.570e-74
Identity = 110/245 (44.90%), Postives = 162/245 (66.12%), Query Frame = 3

Query:   69 NLKKFYKNVSIATQNVN-----EFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIV-LPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYV 785
            ++KKFYKNVSIA    +      +++ LD + L+TP G PF++  E LA AVA EWDSQ + IKR+SMHLT+LCN  +D      P+ +V G+++Y D+DTICFRCTEP+DL E+Q   W+PVL+++ +R+ V P+IT+G++    +  E R +  R+ L  N +GL G Q+C+E LKSV+L +A+ D   S  +AV+LS+LE   QV +WG V  +H+V+TVE+ +RV+A    +  S     V
Sbjct:   30 SIKKFYKNVSIAQLTGSGPSGVTYEVQLDQRKLRTPGGKPFLVPHEMLALAVAQEWDSQKDTIKRHSMHLTALCNRVLDFQADVQPQALVSGIMQYADTDTICFRCTEPDDLVELQKKSWDPVLDWVVKRFKVQPMITNGLIGTVTMSEEDRNVINRHFLTYNRWGLIGLQYCVENLKSVFLTLAMVDGFCSSVRAVELSQLELLFQVGRWGEVLSHHDVQTVELNSRVSAGLLFVLISHQQREV 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
Match: A0A0X3PEM4 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Schistocephalus solidus OX=70667 GN=ATPF2 PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 2.738e-74
Identity = 119/249 (47.79%), Postives = 163/249 (65.46%), Query Frame = 3

Query:   57 SSAKNLKKFYKNVSIA----TQNVNE--FQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYV 785
            S+   + +FYK V+IA    T ++ E  ++ILLD + L+TP+G  F +  E LA AVAHEWD Q E I+RYSM LT+LCNT IDNPT R+ +  V+G++E+ D+DTIC R   P +L + Q   W+ VL +IE++Y   P +T  I LP LP + R+   R++L+ N +GL GFQ C ETLKSV+L +A+ D  +S E+AV LSRLE   Q  +WG+VPW+H VE  ++ TRVAA   LI TS     V
Sbjct:   21 STNAPIMRFYKYVTIAHRGSTDDLTEPAYEILLDKRRLRTPSGKVFSVPHEGLALAVAHEWDYQKETIERYSMPLTTLCNTVIDNPTQRDKDTFVQGIMEFADADTICCRVENPEELRQEQEEKWDRVLGFIEKQYYFRPPVTSSISLPTLPQDFREFIFRHILSYNRWGLIGFQTCAETLKSVWLTLAMVDGFISSEEAVSLSRLEQIFQENRWGSVPWFHGVEAADLNTRVAAGLILILTSHARETV 269

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
Match: A0A4E0R970 (ATP synthase mitochondrial F1 complex assembly factor OS=Fasciola hepatica OX=6192 GN=D915_005451 PE=4 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 5.808e-74
Identity = 110/245 (44.90%), Postives = 161/245 (65.71%), Query Frame = 3

Query:   69 NLKKFYKNVSIATQNVN-----EFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIV-LPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYV 785
            ++KKFYKNVSIA    +      +++ LD + L+TP G PF++  E LA AVA EWDSQ + IKR+SMHLT+LCN  +D      P+ +V G+++Y D+DTICFRCTEP+DL E+Q   W+PVL ++ +R+ V P+IT+G++    +  E R +  R+ L  N +GL G Q+C+E LKSV+L +A+ D   S  +AV+LS+LE   QV +WG V  +H+V+TVE+ +RV+A    +  S     V
Sbjct:   30 SIKKFYKNVSIAQLTGSGPSGVTYEVQLDQRKLRTPGGKPFLVPHEMLALAVAQEWDSQKDTIKRHSMHLTALCNRVLDFQADVEPQALVSGIMQYADTDTICFRCTEPDDLVELQKKSWDPVLNWVAKRFKVQPMITNGLIGTVTMSEEDRNVINRHFLTYNRWGLIGLQYCVENLKSVFLTLAMVDGFCSSVRAVELSQLELLFQVGRWGEVLSHHDVQTVELNSRVSAGLLFVLISHQQREV 274

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
Match: A0A087W060 (ATP synthase mitochondrial F1 complex assembly OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000189000 PE=4 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.117e-72
Identity = 114/254 (44.88%), Postives = 163/254 (64.17%), Query Frame = 3

Query:   45 RRNYSSAKNLKKFYKNVSIA-----TQNVNE--FQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYV 785
            R  +SS  + K+FY+NV +A        V E  +++ LD   L+TP GN F +  E LA AVA+EWDSQ + I+R+++ LT++C+  IDNPT R+ EV+V G++EY D+DTIC+R   P +L   Q + W  VL++IE RY   P IT G  L  +P ESR    R+LL+ N +GL G Q C+E LKS++L +A+ D  L+ ++AVKLSRLE   Q  +WG+V W+HEV+ VE+ TRV+A   ++ TS     V
Sbjct:   17 RLEFSSQVSPKRFYRNVWVAKGVCTADGVTETGYEVFLDKSRLRTPGGNIFSVPHEGLALAVANEWDSQQKYIERFTLPLTTICSHVIDNPTERSKEVIVNGIMEYADTDTICYRIETPEELLVEQESQWGTVLDFIENRYRFRPPITTGFCLTPIPKESRDFIRRHLLSINRWGLAGLQTCVENLKSLWLTLAMVDGFLTSQRAVKLSRLEQNFQERRWGSVEWFHEVDEVEVNTRVSAGLLVVLTSHARRTV 270

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Cavefish
Match: atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:NCBI gene;Acc:103034150])

HSP 1 Score: 226.098 bits (575), Expect = 3.580e-73
Identity = 106/240 (44.17%), Postives = 159/240 (66.25%), Query Frame = 3

Query:   48 RNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTS 767
            R  + A   KKFY++V+I+      ++I LD + LKTP G  F + +E+LA AVA EWD+Q + +K Y+MHLT+LCNT++DNPT R+ + ++   L++L++DT+C+R  EP  L E+Q   W+PVLE+IE+RYNV    +  I+ P++P E++  F ++L + N + L G ++ I  LKSV L++ L D  L+VEQAV LSRLE E+Q+  WGNV W H+ +  E+  R AA    +Y S
Sbjct:   39 RYATPATERKKFYRDVTISQGEGGLYEINLDRRKLKTPGGKLFTVPNEALAIAVATEWDAQKDTLKFYTMHLTTLCNTALDNPTQRDKDQIISAALKFLETDTVCYRVEEPPGLVELQKNEWDPVLEWIEKRYNVVIGSSYSIMGPQIPEETKDSFRQHLKSYNVWSLIGLEYVISQLKSVVLSLGLIDRHLTVEQAVLLSRLEEEYQIQHWGNVEWAHDYDMYELRARTAAGTLFVYLS 278

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001540.1 (pep scaffold:Pmarinus_7.0:GL476343:512479:523707:1 gene:ENSPMAG00000001388.1 transcript:ENSPMAT00000001540.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 223.402 bits (568), Expect = 8.908e-73
Identity = 106/231 (45.89%), Postives = 151/231 (65.37%), Query Frame = 3

Query:   75 KKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTS 767
            K+FY +VSI       F++ LD + L+TP G  F + SESLA AVA EWD Q   I+ +SMHLT+LCNT++DNPT R PE +    L+YLD+DTIC+R  EP  L  +Q   W+PVL + E+RY VT   +  I+ P++P E+R    ++LL+ N + L G ++ +  LKS+ L +AL D  L+VE+AV LSRLE E Q+A+WGNV W H+++ +++  R AA A  +  S
Sbjct:   43 KRFYNDVSITHGEGGMFEVNLDRRKLRTPQGKLFAVPSESLAVAVATEWDMQKNVIQMHSMHLTTLCNTALDNPTHRGPEQLASAALKYLDTDTICYRMEEPPALVSLQQGEWDPVLSWAEERYGVTIGSSTSIMGPEIPQETRNTLNQHLLSYNAWALIGLEYVVMQLKSLVLTLALVDRHLNVEEAVLLSRLEEEFQIARWGNVEWAHDLDILQVRARTAAGALFVCLS 273

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Yeast
Match: ATP12 (Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase; conserved protein; required for assembly of alpha and beta subunits into F1 sector of mitochondrial F1F0 ATP synthase; human homolog ATPAF2 can complement yeast atp12 mutant; mutation of human homolog reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency [Source:SGD;Acc:S000003716])

HSP 1 Score: 53.9138 bits (128), Expect = 5.989e-9
Identity = 67/279 (24.01%), Postives = 124/279 (44.44%), Query Frame = 3

Query:   63 AKNLKKFYKNVSIATQNVNEFQILL--DSKVLKTPNGNPFII-NSESLA--HAVAHEWDSQNENIKRYSMHLTSLCNTSID----NPTGRNPEVVVK----------GLLEYLDSDTICFRCTEPNDLYE-----MQCAFWNPVLEYIEQ-------RYNVTPVITDGIVLPKLPHESRKIFE----RYLLANNNFGLTGFQHCIETLKSVYLAIALTDNM-----------LSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            +K  +KF++ VS+  ++V + +I L  D + +KTP GN  I+ N++SL             + +IK +S+ LTSL    ID    N  G +P++V K           LL YLD+DT+      P + +E      Q   + P+++ +E+         N+   I D  +     ++   I +    +Y+ + + + L   +  + T KS    + L +N              ++  V+ + LE   QV KWG V   H+V+  ++  ++  +A   +
Sbjct:   48 SKTSQKFWEKVSL-NRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLSSLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLL--VFSPMNEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNIRLQILDADIHGLRGNQQSDIVKNAAKKYMSSLSPWDLAILEKTVLTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAATLETIFQVEKWGEVEDTHDVDKRDIRRKIHTAAIAAF 323

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Nematostella
Match: EDO38103 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDZ9])

HSP 1 Score: 167.162 bits (422), Expect = 3.561e-51
Identity = 82/229 (35.81%), Postives = 141/229 (61.57%), Query Frame = 3

Query:   75 KKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIY 761
            K+FYK+  +  +    FQI +D++ +KTP  N  ++ ++ LA A+A EW+ Q   IK  SMHLTSL NT ID P+  + +  ++ +LEYL +DT+ F  ++P+DL E+Q   W P++ +   R+ V+    +G++   L        +  L + N++ +TG ++ ++T KS   ++AL DN ++VE+A  L+RLE E Q+ +WG+V W H+V+ +E+  R+AA+A   +
Sbjct:    3 KRFYKSAGVE-ETEGGFQITVDNRKVKTPARNWLVVPNQKLAVAMASEWNMQTGTIKPASMHLTSLANTVIDKPSECSKDQRIEDILEYLYTDTVRFPASDPDDLVELQKTEWGPLISWFSSRFGVSVPSCEGLLATPLEPGDVNKLKYELTSVNHWAMTGLEYAVDTSKSFITSMALLDNHVTVEKAAYLTRLELEFQIGRWGSVEWAHDVDLMELRCRLAAAALFYH 230

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Medaka
Match: atpaf2 (ATP synthase mitochondrial F1 complex assembly factor 2 [Source:NCBI gene;Acc:101173178])

HSP 1 Score: 220.705 bits (561), Expect = 5.310e-71
Identity = 106/239 (44.35%), Postives = 160/239 (66.95%), Query Frame = 3

Query:   54 YSSAKN-LKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTS 767
            YS+A    K+FY++VSI+  +   ++I LD + LKTP G  F + +E+LA AVA EWD+Q   +K Y+MHLT+LCNT++DNPT RN E ++   L++L++DTIC+R  +P  L ++Q   W+PVL +IE RYNVT   +  I+ P++P  +++ F ++L + + + LTG +  I  LKS+ L++ + D  L+VEQAV LSRLE E+Q++ WGNV W H+ +  E+  R AA A  I  S
Sbjct:   34 YSTASTERKRFYQDVSISQGDDGLYEINLDRRKLKTPGGKLFTVPNEALAIAVATEWDAQRGTLKFYTMHLTTLCNTALDNPTQRNKEQMINSALKFLETDTICYRVEDPPGLVDLQKNEWDPVLHWIENRYNVTIGSSSSILGPEIPQATKETFRQHLNSYSLWSLTGLEFVISQLKSILLSLGMVDRYLTVEQAVLLSRLEEEYQISHWGNVEWAHDYDMYELRARTAAGALFIQLS 272

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BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Planmine SMEST
Match: SMESG000057111.1 (SMESG000057111.1)

HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 3

Query:   12 MFNFTKLSLFIRRNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYVVSTK 797
            MFNFTKLSLFIRRNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYVVSTK
Sbjct:    1 MFNFTKLSLFIRRNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVLKTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTGRNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNVTPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAIALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAFLIYTSQNHHYVVSTK 262

The following BLAST results are available for this feature:

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Human
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Celegans
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Fly
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Zebrafish
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Xenopus
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Mouse
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Cavefish
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Sea Lamprey
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Yeast
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Nematostella
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Medaka
BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Planmine SMEST

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ATPAF2	2.590e-72	45.38	ATP synthase mitochondrial F1 complex assembly fac...	[more]
ATPAF2	3.117e-48	45.24	ATP synthase mitochondrial F1 complex assembly fac...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3


Match Name	E-value	Identity	Description
Y116A8C.27	5.400e-35	30.42	pep chromosome:WBcel235:IV:17090630:17096286:-1 ge...	[more]
Y116A8C.27	5.400e-35	30.42	pep chromosome:WBcel235:IV:17090630:17096268:-1 ge...	[more]
Y116A8C.27	3.071e-21	27.43	pep chromosome:WBcel235:IV:17090630:17096248:-1 ge...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2


Match Name	E-value	Identity	Description
l(2)k14505	1.155e-55	38.27	gene:FBgn0021856 transcript:FBtr0081482	[more]
l(2)k14505	1.155e-55	38.27	gene:FBgn0021856 transcript:FBtr0330677	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
atpaf2	6.452e-73	45.87	ATP synthase mitochondrial F1 complex assembly fac...	[more]
atpaf2	6.452e-73	45.87	ATP synthase mitochondrial F1 complex assembly fac...	[more]
atpaf2	1.695e-31	49.56	ATP synthase mitochondrial F1 complex assembly fac...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2


Match Name	E-value	Identity	Description
atpaf2	6.731e-71	45.53	ATP synthase mitochondrial F1 complex assembly fac...	[more]
atpaf2	9.065e-51	39.57	ATP synthase mitochondrial F1 complex assembly fac...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3


Match Name	E-value	Identity	Description
Atpaf2	1.851e-70	44.12	ATP synthase mitochondrial F1 complex assembly fac...	[more]
Atpaf2	3.188e-70	44.12	ATP synthase mitochondrial F1 complex assembly fac...	[more]
Atpaf2	1.066e-29	50.00	ATP synthase mitochondrial F1 complex assembly fac...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q8N5M1\|ATPF2_HUMAN	1.244e-71	45.38	ATP synthase mitochondrial F1 complex assembly fac...	[more]
sp\|Q1LZ96\|ATPF2_BOVIN	1.229e-70	44.12	ATP synthase mitochondrial F1 complex assembly fac...	[more]
sp\|Q91YY4\|ATPF2_MOUSE	1.295e-69	44.12	ATP synthase mitochondrial F1 complex assembly fac...	[more]
sp\|Q9UT16\|ATP12_SCHPO	7.431e-24	27.82	Protein atp12, mitochondrial OS=Schizosaccharomyce...	[more]
sp\|P22135\|ATP12_YEAST	4.159e-7	24.01	Protein ATP12, mitochondrial OS=Saccharomyces cere...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
R7V7B5	3.580e-75	45.04	Uncharacterized protein OS=Capitella teleta OX=283...	[more]
A0A504YKS0	2.570e-74	44.90	ATP synthase mitochondrial F1 complex assembly fac...	[more]
A0A0X3PEM4	2.738e-74	47.79	ATP synthase mitochondrial F1 complex assembly fac...	[more]
A0A4E0R970	5.808e-74	44.90	ATP synthase mitochondrial F1 complex assembly fac...	[more]
A0A087W060	2.117e-72	44.88	ATP synthase mitochondrial F1 complex assembly OS=...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1


Match Name	E-value	Identity	Description
atpaf2	3.580e-73	44.17	ATP synthase mitochondrial F1 complex assembly fac...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000001540.1	8.908e-73	45.89	pep scaffold:Pmarinus_7.0:GL476343:512479:523707:1...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
ATP12	5.989e-9	24.01	Assembly factor for F1 sector of mitochondrial F1F...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO38103	3.561e-51	35.81	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1


Match Name	E-value	Identity	Description
atpaf2	5.310e-71	44.35	ATP synthase mitochondrial F1 complex assembly fac...	[more]

BLAST of ATP synthase mitochondrial F1 complex assembly factor 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1


Match Name	E-value	Identity	Description
SMESG000057111.1	0.000e+0	100.00	SMESG000057111.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30033480 ID=SMED30033480|Name=ATP synthase mitochondrial F1 complex assembly factor 2|organism=Schmidtea mediterranea sexual|type=transcript|length=803bp
GAACTTTTTCGATGTTTAATTTTACAAAGTTATCTTTATTTATCCGAAGA
AATTACTCGTCAGCTAAAAATTTAAAAAAATTTTATAAGAATGTGTCAAT
AGCCACACAAAATGTAAACGAATTCCAAATCCTTCTTGATTCAAAAGTTT
TAAAAACTCCAAATGGCAATCCATTTATCATTAATAGTGAAAGCTTAGCA
CATGCTGTAGCTCATGAATGGGATTCTCAAAATGAAAACATCAAAAGATA
TAGTATGCATTTAACATCTCTATGTAATACATCAATTGATAATCCAACAG
GAAGAAATCCAGAAGTTGTTGTTAAAGGATTATTGGAATATCTAGACAGT
GATACAATTTGTTTTCGGTGCACTGAACCGAATGACTTGTATGAAATGCA
ATGTGCATTCTGGAATCCAGTTTTGGAATACATTGAACAGCGATACAATG
TCACTCCAGTCATTACTGACGGCATTGTTTTACCTAAGTTACCACACGAG
TCTCGTAAAATATTCGAAAGGTATTTACTAGCTAACAACAACTTCGGTTT
GACAGGTTTCCAGCATTGTATTGAAACTTTGAAATCAGTTTATTTAGCAA
TAGCTCTGACTGATAACATGTTATCAGTGGAGCAAGCAGTAAAATTGAGC
CGTTTAGAGTATGAGCATCAGGTTGCCAAATGGGGAAATGTTCCTTGGTA
TCATGAAGTTGAAACTGTAGAAATGGAAACTCGCGTCGCTGCATCAGCAT
TCTTGATTTATACAAGTCAAAACCATCACTACGTTGTATCGACGAAATGA
AAC

protein sequence of SMED30033480-orf-1

>SMED30033480-orf-1 ID=SMED30033480-orf-1|Name=SMED30033480-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=266bp
TFSMFNFTKLSLFIRRNYSSAKNLKKFYKNVSIATQNVNEFQILLDSKVL
KTPNGNPFIINSESLAHAVAHEWDSQNENIKRYSMHLTSLCNTSIDNPTG
RNPEVVVKGLLEYLDSDTICFRCTEPNDLYEMQCAFWNPVLEYIEQRYNV
TPVITDGIVLPKLPHESRKIFERYLLANNNFGLTGFQHCIETLKSVYLAI
ALTDNMLSVEQAVKLSRLEYEHQVAKWGNVPWYHEVETVEMETRVAASAF
LIYTSQNHHYVVSTK*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000429	neoblast

Vocabulary: **INTERPRO**
Term	Definition
IPR042272	ATP12_ATP_synth-F1-assembly_N
IPR011419	ATP12_ATP_synth-F1-assembly
IPR023335	ATP12_ortho_dom_sf

Vocabulary: **biological process**
Term	Definition
GO:0043461	proton-transporting ATP synthase complex assembly

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042272	ATP12, ATP synthase F1-assembly protein, N-terminal	GENE3D	G3DSA:3.30.2180.30		coord: 17..83 e-value: 1.0E-20 score: 75.0
IPR023335	ATP12 orthogonal Bundle domain superfamily	GENE3D	G3DSA:1.10.3580.10		coord: 85..255 e-value: 4.9E-47 score: 161.7
IPR011419	ATP12, ATP synthase F1-assembly protein	PFAM	PF07542	ATP12	coord: 25..144 e-value: 2.0E-34 score: 118.5
IPR011419	ATP12, ATP synthase F1-assembly protein	PANTHER	PTHR21013	ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR	coord: 19..257
None	No IPR available	PANTHER	PTHR21013:SF10	ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2	coord: 19..257
None	No IPR available	SUPERFAMILY	SSF160909	ATP12-like	coord: 13..253