Zinc finger protein, putative

Overview
NameZinc finger protein, putative
Smed IDSMED30033476
Length (bp)1482
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Zinc finger protein, putative (SMED30033476) t-SNE clustered cells

Violin plots show distribution of expression levels for Zinc finger protein, putative (SMED30033476) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Zinc finger protein, putative (SMED30033476) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Zinc finger protein, putative (SMED30033476) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30033476

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30033476SMESG000068172.1 Contig3306GPL15192PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30033476SMESG000068172.1 Contig3306GPL15192PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30033476SMESG000068172.1 Contig3306GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
pharynxSMED30033476SMESG000025870.1 Contig3306GPL15192PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30033476SMESG000025870.1 Contig3306GPL15192PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30033476SMESG000025870.1 Contig3306GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
gutSMED30033476SMESG000025870.1 dd_Smed_v4_3821_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30033476SMESG000025870.1 Contig37061newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30033476SMESG000025870.1 Contig37061uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
gutSMED30033476SMESG000025870.1 SMED30033476smed_20140614PMID:26457503
Tu et al., 2015		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30033476SMESG000025870.1 SMED30033476smed_20140614PMID:26457503
Tu et al., 2015		whole organism asexual adult colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Human
Match: SLC2A4RG (SLC2A4 regulator [Source:HGNC Symbol;Acc:HGNC:15930])

HSP 1 Score: 56.9954 bits (136), Expect = 4.305e-8
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3 
Query: 1254 TKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             KKCRK+YG+++R LWC  C+WKKAC RF
Sbjct:  357 AKKCRKVYGMERRDLWCTACRWKKACQRF 385
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Human
Match: ZNF704 (zinc finger protein 704 [Source:HGNC Symbol;Acc:HGNC:32291])

HSP 1 Score: 55.0694 bits (131), Expect = 1.559e-7
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            KKCRK+YG++ R +WC  C+WKKAC RF
Sbjct:  383 KKCRKVYGMENRDMWCTACRWKKACQRF 410
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Human
Match: ZNF395 (zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737])

HSP 1 Score: 54.6842 bits (130), Expect = 2.485e-7
Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 3 
Query: 1059 NILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTP------TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             I +  H+ +S S +    +     P R RS S    S   Q +  +++   + +P       +++R E   KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  417 QIPVSPHIYTSVSWAAAPSAACSLSPVRSRSLS---FSEPQQPAPAMKSHLIVTSPPRAQSGARKARGEA--KKCRKVYGIEHRDQWCTACRWKKACQRF 511
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Human
Match: ZNF395 (zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737])

HSP 1 Score: 54.6842 bits (130), Expect = 2.485e-7
Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 3 
Query: 1059 NILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTP------TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             I +  H+ +S S +    +     P R RS S    S   Q +  +++   + +P       +++R E   KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  417 QIPVSPHIYTSVSWAAAPSAACSLSPVRSRSLS---FSEPQQPAPAMKSHLIVTSPPRAQSGARKARGEA--KKCRKVYGIEHRDQWCTACRWKKACQRF 511
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Human
Match: ZNF395 (zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737])

HSP 1 Score: 54.6842 bits (130), Expect = 2.485e-7
Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 3 
Query: 1059 NILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTP------TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             I +  H+ +S S +    +     P R RS S    S   Q +  +++   + +P       +++R E   KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  417 QIPVSPHIYTSVSWAAAPSAACSLSPVRSRSLS---FSEPQQPAPAMKSHLIVTSPPRAQSGARKARGEA--KKCRKVYGIEHRDQWCTACRWKKACQRF 511
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Fly
Match: Glut4EF (gene:FBgn0267336 transcript:FBtr0305157)

HSP 1 Score: 62.7734 bits (151), Expect = 3.719e-10
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 3 
Query: 1221 TPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +P KR+R E   KKCRK+YG+++R  WC QC+WKKACSRF 
Sbjct:  482 SPGKRTRGEN--KKCRKVYGMEKRDQWCTQCRWKKACSRFG 520
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Fly
Match: Glut4EF (gene:FBgn0267336 transcript:FBtr0112577)

HSP 1 Score: 62.7734 bits (151), Expect = 3.719e-10
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 3 
Query: 1221 TPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +P KR+R E   KKCRK+YG+++R  WC QC+WKKACSRF 
Sbjct:  482 SPGKRTRGEN--KKCRKVYGMEKRDQWCTQCRWKKACSRFG 520
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Fly
Match: Glut4EF (gene:FBgn0267336 transcript:FBtr0333686)

HSP 1 Score: 63.1586 bits (152), Expect = 3.859e-10
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 3 
Query: 1221 TPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +P KR+R E   KKCRK+YG+++R  WC QC+WKKACSRF 
Sbjct:  702 SPGKRTRGEN--KKCRKVYGMEKRDQWCTQCRWKKACSRFG 740
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Fly
Match: Glut4EF (gene:FBgn0267336 transcript:FBtr0112576)

HSP 1 Score: 63.1586 bits (152), Expect = 3.859e-10
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 3 
Query: 1221 TPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +P KR+R E   KKCRK+YG+++R  WC QC+WKKACSRF 
Sbjct:  702 SPGKRTRGEN--KKCRKVYGMEKRDQWCTQCRWKKACSRFG 740
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Fly
Match: Glut4EF (gene:FBgn0267336 transcript:FBtr0333685)

HSP 1 Score: 61.2326 bits (147), Expect = 1.336e-9
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 3 
Query: 1221 TPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            +P KR+R E   KKCRK+YG+++R  WC QC+WKKACSRF
Sbjct:  702 SPGKRTRGEN--KKCRKVYGMEKRDQWCTQCRWKKACSRF 739
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Zebrafish
Match: si:rp71-79p20.2 (si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-83])

HSP 1 Score: 59.3066 bits (142), Expect = 3.953e-9
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 3 
Query: 1203 NETEMLTPTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            N T    PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  299 NSTSTSKPTTGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 346
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Zebrafish
Match: si:rp71-79p20.2 (si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-83])

HSP 1 Score: 58.9214 bits (141), Expect = 4.497e-9
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 3 
Query: 1203 NETEMLTPTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            N T    PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  264 NSTSTSKPTTGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 311
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Zebrafish
Match: AL954725.1 (si:rp71-79p20.2 [Source:NCBI gene;Acc:368491])

HSP 1 Score: 58.9214 bits (141), Expect = 4.625e-9
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 3 
Query: 1203 NETEMLTPTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            N T    PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  300 NSTSTSKPTTGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 347
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Zebrafish
Match: si:rp71-79p20.2 (si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-83])

HSP 1 Score: 59.3066 bits (142), Expect = 6.406e-9
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 3 
Query: 1203 NETEMLTPTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            N T    PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  438 NSTSTSKPTTGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 485
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Zebrafish
Match: si:rp71-79p20.2 (si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-83])

HSP 1 Score: 58.9214 bits (141), Expect = 6.470e-9
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 3 
Query: 1203 NETEMLTPTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            N T    PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  402 NSTSTSKPTTGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 449
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Xenopus
Match: gzf1 (GDNF inducible zinc finger protein 1 [Source:Xenbase;Acc:XB-GENE-1020991])

HSP 1 Score: 55.4546 bits (132), Expect = 1.561e-7
Identity = 37/134 (27.61%), Postives = 60/134 (44.78%), Query Frame = 3 
Query:  957 NIEHFEGTLSSSFNNRVLNNEFSTLTNEKIQLFHNILLR--HHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTPTKRS----RVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             +   E  LSS+ +     + +    +   Q   +I +    H+ +S S +    +     P R RS S        Q +  I++   + +P + S    ++    KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  368 EVPSVESPLSSALSQSAPGSFWHIQADHAYQALPSIQIPVSPHIFTSISWAAAPSTIPTLSPIRSRSLS---FGEQQQQTPSIKSHLIVASPPRASNGNRKIRGEAKKCRKVYGIEHRDQWCTACRWKKACQRF 498
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Xenopus
Match: galnt16 (polypeptide N-acetylgalactosaminyltransferase 16 [Source:Xenbase;Acc:XB-GENE-986567])

HSP 1 Score: 51.9878 bits (123), Expect = 1.556e-6
Identity = 18/28 (64.29%), Postives = 22/28 (78.57%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            KKCRK+YG++ R  WC  C+WKKAC RF
Sbjct:  370 KKCRKVYGMENRDKWCTACRWKKACQRF 397
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Mouse
Match: Zfp395 (zinc finger protein 395 [Source:MGI Symbol;Acc:MGI:2682318])

HSP 1 Score: 56.225 bits (134), Expect = 5.306e-8
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 3 
Query: 1227 TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            T+++R E   KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  471 TRKARGEA--KKCRKVYGIEHRDQWCTACRWKKACQRF 506
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Mouse
Match: Zfp704 (zinc finger protein 704 [Source:MGI Symbol;Acc:MGI:2180715])

HSP 1 Score: 55.8398 bits (133), Expect = 9.510e-8
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            KKCRK+YG++ R +WC  C+WKKAC RF
Sbjct:  537 KKCRKVYGMENRDMWCTACRWKKACQRF 564
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Mouse
Match: Zfp704 (zinc finger protein 704 [Source:MGI Symbol;Acc:MGI:2180715])

HSP 1 Score: 54.6842 bits (130), Expect = 1.645e-7
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            KKCRK+YG++ R +WC  C+WKKAC RF
Sbjct:  476 KKCRKVYGMENRDMWCTACRWKKACQRF 503
[Close]
BLAST of Zinc finger protein, putative vs. UniProt/SwissProt
Match: sp|Q6DFC8|ZN395_XENLA (Zinc finger protein 395 OS=Xenopus laevis OX=8355 GN=znf395 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.882e-7
Identity = 38/134 (28.36%), Postives = 61/134 (45.52%), Query Frame = 3 
Query:  957 NIEHFEGTLSSSFNNRVLNNEFSTLTNEKIQLFHNILLR--HHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTPTKRS----RVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             +   E  LSS+ +     + +   T+   Q   +I +    H+ +S S +    +     P R RS     +S   Q    I++   + +P + S    ++    KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  368 EVPSVESPLSSALSQSAPGSFWHIQTDHAYQALSSIQIPVSPHIFTSISWAAASSTIPTLSPIRSRS-----LSFSEQQQQAIKSHLIVASPPRPSNGNRKIRGEAKKCRKVYGIEHRDQWCTACRWKKACQRF 496
[Close]
BLAST of Zinc finger protein, putative vs. UniProt/SwissProt
Match: sp|Q9NR83|S2A4R_HUMAN (SLC2A4 regulator OS=Homo sapiens OX=9606 GN=SLC2A4RG PE=1 SV=4)

HSP 1 Score: 56.9954 bits (136), Expect = 2.067e-7
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3 
Query: 1254 TKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             KKCRK+YG+++R LWC  C+WKKAC RF
Sbjct:  357 AKKCRKVYGMERRDLWCTACRWKKACQRF 385
[Close]
BLAST of Zinc finger protein, putative vs. UniProt/SwissProt
Match: sp|Q1LY51|ZN704_DANRE (Zinc finger protein 704 OS=Danio rerio OX=7955 GN=znf704 PE=3 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 3.740e-7
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 3 
Query: 1227 TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            +++SR E   KKCRK+YG++ R +WC  C+WKKAC RF
Sbjct:  464 SRKSRGEG--KKCRKVYGMENRDMWCTACRWKKACQRF 499
[Close]
BLAST of Zinc finger protein, putative vs. UniProt/SwissProt
Match: sp|Q9ERQ3|ZN704_MOUSE (Zinc finger protein 704 OS=Mus musculus OX=10090 GN=Znf704 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 6.652e-7
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            KKCRK+YG++ R +WC  C+WKKAC RF
Sbjct:  537 KKCRKVYGMENRDMWCTACRWKKACQRF 564
[Close]
BLAST of Zinc finger protein, putative vs. UniProt/SwissProt
Match: sp|Q6ZNC4|ZN704_HUMAN (Zinc finger protein 704 OS=Homo sapiens OX=9606 GN=ZNF704 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 7.487e-7
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            KKCRK+YG++ R +WC  C+WKKAC RF
Sbjct:  383 KKCRKVYGMENRDMWCTACRWKKACQRF 410
[Close]
BLAST of Zinc finger protein, putative vs. TrEMBL
Match: A0A443R9S2 (Zinc finger protein 704-like protein OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_02225 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.907e-10
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 3 
Query: 1197 IQNETEM--LTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            +Q+ T++  ++PT+R+R ET  KKCRKMYG+D R  WC QCKWKKACSRF
Sbjct:  173 LQSPTKLSSVSPTRRTRGET--KKCRKMYGMDNRDSWCTQCKWKKACSRF 220
[Close]
BLAST of Zinc finger protein, putative vs. TrEMBL
Match: A0A3S4R650 (Zinc finger protein 704-like protein OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_14566 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.406e-10
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 3 
Query: 1197 IQNETEM--LTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            +Q+ T++  ++PT+R+R ET  KKCRKMYG+D R  WC QCKWKKACSRF
Sbjct:  183 LQSPTKLSSVSPTRRTRGET--KKCRKMYGMDNRDSWCTQCKWKKACSRF 230
[Close]
BLAST of Zinc finger protein, putative vs. TrEMBL
Match: A0A1J1J6X5 (CLUMA_CG021018, isoform A OS=Clunio marinus OX=568069 GN=CLUMA_CG021018 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.139e-9
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 3 
Query: 1167 ISSLNQISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            + S+NQ +N  +   ++++P +R+R E   KKCRK+YG+D R  WC QCKWKKACSRF 
Sbjct:  538 LKSINQANNSNKMRPQIVSPGRRTRGEN--KKCRKVYGMDNRDSWCTQCKWKKACSRFG 594
[Close]
BLAST of Zinc finger protein, putative vs. TrEMBL
Match: A0A0A9XUH7 (Zinc finger protein 395 OS=Lygus hesperus OX=30085 GN=znf395_1 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.823e-9
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 3 
Query: 1071 RHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQ--ISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +  ++++   S+ KP++F  WP     +   +  S  Q  +S    N     +P++R+R +T  KKCRK+YG++ R LWC QCKWKKAC+RF 
Sbjct:  364 KRALAAATPVSIPKPTSF-SWPVSAAVSPVSMRKSGKQMKLSVSAPNAKVPGSPSRRARGDT--KKCRKVYGMEHRELWCTQCKWKKACTRFG 453
[Close]
BLAST of Zinc finger protein, putative vs. TrEMBL
Match: A0A0A9XSB4 (Zinc finger protein 395 OS=Lygus hesperus OX=30085 GN=znf395_0 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.257e-9
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 3 
Query: 1071 RHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQ--ISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +  ++++   S+ KP++F  WP     +   +  S  Q  +S    N     +P++R+R +T  KKCRK+YG++ R LWC QCKWKKAC+RF 
Sbjct:  383 KRALAAATPVSIPKPTSF-SWPVSAAVSPVSMRKSGKQMKLSVSAPNAKVPGSPSRRARGDT--KKCRKVYGMEHRELWCTQCKWKKACTRFG 472
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Cavefish
Match: znf395a (zinc finger protein 395-like [Source:NCBI gene;Acc:103042380])

HSP 1 Score: 58.151 bits (139), Expect = 1.156e-8
Identity = 43/128 (33.59%), Postives = 59/128 (46.09%), Query Frame = 3 
Query:  978 TLSSSFNNRV--LNNEFSTLTNEKIQLFHNILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTP-----TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             LS S    V  +++E S   +  +QL     +    SS ++  LT   +    P R RS S       NQ +    +   +  P     T+R R E   KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  314 PLSQSAPGSVWLVHSEHSYQASPPVQLTQCKPVPVPASSRWTPPLTAHQSKQGTPFRRRSVSVGEQWLQNQSAPSRPHPASVSPPRNHCITRRIRGEA--KKCRKVYGIEHRDQWCTACRWKKACQRF 439
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Cavefish
Match: si:rp71-79p20.2 (zinc finger protein 704-like [Source:NCBI gene;Acc:103041358])

HSP 1 Score: 58.151 bits (139), Expect = 1.197e-8
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 3 
Query: 1224 PTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  475 PTAGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 515
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Cavefish
Match: si:rp71-79p20.2 (zinc finger protein 704-like [Source:NCBI gene;Acc:103041358])

HSP 1 Score: 57.7658 bits (138), Expect = 1.385e-8
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 3 
Query: 1224 PTKRSRVETG-TKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            PT  +R   G  KKCRK+YG++++ LWC  C+WKKAC RF+
Sbjct:  439 PTAGTRKPRGEAKKCRKVYGMEKKDLWCTACRWKKACQRFT 479
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Cavefish
Match: znf395b (zinc finger protein 395 [Source:NCBI gene;Acc:103040630])

HSP 1 Score: 53.9138 bits (128), Expect = 2.306e-7
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 3 
Query: 1254 TKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
             KKCRK+YG+++R  WC  C+WKKAC RF
Sbjct:  377 AKKCRKVYGVERRDQWCTACRWKKACQRF 405
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Cavefish
Match: znf704 (zinc finger protein 704 [Source:NCBI gene;Acc:560056])

HSP 1 Score: 53.5286 bits (127), Expect = 3.607e-7
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 3 
Query: 1227 TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSR 1337
            +++SR E   KKCRK+YG++ R +WC  C+WKKAC R
Sbjct:  471 SRKSRGEG--KKCRKVYGMENRDMWCTACRWKKACQR 505
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Sea Lamprey
Match: ZNF704 (zinc finger protein 704 [Source:HGNC Symbol;Acc:HGNC:32291])

HSP 1 Score: 57.3806 bits (137), Expect = 2.271e-9
Identity = 24/63 (38.10%), Postives = 34/63 (53.97%), Query Frame = 3 
Query: 1167 ISSLNQISNGIQNETEMLTPTKRS-----RVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            I+ L Q    +      L PT R      ++    KKCRK+YG++ + +WC  C+WKKAC RF
Sbjct:  262 ITPLGQAGE-LAGAATPLRPTPRPTSMLRKIRGEGKKCRKVYGMENKDMWCTACRWKKACQRF 323
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Medaka
Match: si:rp71-79p20.2 (SLC2A4 regulator [Source:NCBI gene;Acc:105354393])

HSP 1 Score: 57.7658 bits (138), Expect = 1.781e-8
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 3 
Query: 1227 TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            T++ R E   KKCRK+YG+++R +WC  C+WKKAC RF
Sbjct:  493 TRKPRGEA--KKCRKVYGMEKRDMWCTACRWKKACQRF 528
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Medaka
Match: si:rp71-79p20.2 (SLC2A4 regulator [Source:NCBI gene;Acc:105354393])

HSP 1 Score: 57.3806 bits (137), Expect = 2.016e-8
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 3 
Query: 1227 TKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            T++ R E   KKCRK+YG+++R +WC  C+WKKAC RF
Sbjct:  446 TRKPRGEA--KKCRKVYGMEKRDMWCTACRWKKACQRF 481
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Medaka
Match: znf395a (zinc finger protein 395 [Source:NCBI gene;Acc:101165868])

HSP 1 Score: 56.6102 bits (135), Expect = 3.175e-8
Identity = 26/55 (47.27%), Postives = 32/55 (58.18%), Query Frame = 3 
Query: 1176 LNQISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRF 1340
            +  +S G Q       P +R R E   KKCRK+YGI+ R  WC  C+WKKAC RF
Sbjct:  352 VRSVSVGEQWLQHQGAPCRRIRSEA--KKCRKVYGIEHRDQWCTACRWKKACQRF 404
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Medaka
Match: znf704 (zinc finger protein 704 [Source:NCBI gene;Acc:101162616])

HSP 1 Score: 55.8398 bits (133), Expect = 5.038e-8
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 3 
Query: 1239 RVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            +V    KKCRK+YG++ R +WC  C+WKKAC RF+
Sbjct:  407 KVRGEGKKCRKVYGMENRDMWCTACRWKKACQRFT 441
[Close]
BLAST of Zinc finger protein, putative vs. Ensembl Medaka
Match: znf704 (zinc finger protein 704 [Source:NCBI gene;Acc:101162616])

HSP 1 Score: 56.225 bits (134), Expect = 5.324e-8
Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 3 
Query: 1257 KKCRKMYGIDQRHLWCNQCKWKKACSRFS 1343
            KKCRK+YG++ R +WC  C+WKKAC RF+
Sbjct:  484 KKCRKVYGMENRDMWCTACRWKKACQRFT 512
[Close]
BLAST of Zinc finger protein, putative vs. Planmine SMEST
Match: SMESG000025870.1 (SMESG000025870.1)

HSP 1 Score: 833.943 bits (2153), Expect = 0.000e+0
Identity = 434/438 (99.09%), Postives = 436/438 (99.54%), Query Frame = 3 
Query:   42 MFPVKGTTVWVNFKDKPYLGKVLQTSPELDMVCVRISNYLDHVSRDIDKTDLVAHSCPVSNPSLFSNRQSSVVITCGLADICRVEPKNDPHFEKNRHESTNDSNSEIVIESNPVHIPKTSENRDSKDGXXXXXXXXXXXXPEDDADWLDSFAIKKLLKNSESDNNKPFTFNNKYWVCWHCHVYLSDEHEMNLHVINKHKLEALVDKDNWIVLGGIKGLDYDEVKSQEDSNIKDLDNIHISSISRKRQFXXXXXXXXXXXXXXXXFYSQSYCNSTKSFATQNDFETSFNDFRCHEFSRANVAKKVNNIEHFEGTLSSSFNNRVLNNEFSTLTNEKIQLFHNILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFSSEIN 1355
            MFPVKGTTVWVNFKDKPYLGKVLQTSPELDMVCVRISNYLDHVSRDIDKTDLVAHSCPVSNPSLFSNRQSSVVITCGLADICRVEPKNDPHFEKNRHESTNDSNSEIVIESNPVHIPKTSENRDSKDGQSSRNNSQISNSPEDDADW DSFAIK+LLKNSESDNNKPFTFNNKYWVCWHCH+YLSDEHEMNLHVINKHKLEALVDKDNWIVLGGIKGLDYDEVKSQEDSNIKDLDNIHISSISRKRQFLESTSGLSNSLTNSNEFYSQSYCNSTKSFATQNDFETSFNDFRCHEFSRANVAKKVNNIEHFEG LSSSFNNRVLNNEFSTLTNEKIQLFHNILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFSSEIN
Sbjct:    1 MFPVKGTTVWVNFKDKPYLGKVLQTSPELDMVCVRISNYLDHVSRDIDKTDLVAHSCPVSNPSLFSNRQSSVVITCGLADICRVEPKNDPHFEKNRHESTNDSNSEIVIESNPVHIPKTSENRDSKDGQSSRNNSQISNSPEDDADWSDSFAIKRLLKNSESDNNKPFTFNNKYWVCWHCHLYLSDEHEMNLHVINKHKLEALVDKDNWIVLGGIKGLDYDEVKSQEDSNIKDLDNIHISSISRKRQFLESTSGLSNSLTNSNEFYSQSYCNSTKSFATQNDFETSFNDFRCHEFSRANVAKKVNNIEHFEGILSSSFNNRVLNNEFSTLTNEKIQLFHNILLRHHVSSSFSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTPTKRSRVETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFSSEIN 438
The following BLAST results are available for this feature:
BLAST of Zinc finger protein, putative vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SLC2A4RG4.305e-865.52SLC2A4 regulator [Source:HGNC Symbol;Acc:HGNC:1593... [more]
ZNF7041.559e-764.29zinc finger protein 704 [Source:HGNC Symbol;Acc:HG... [more]
ZNF3952.485e-733.00zinc finger protein 395 [Source:HGNC Symbol;Acc:HG... [more]
ZNF3952.485e-733.00zinc finger protein 395 [Source:HGNC Symbol;Acc:HG... [more]
ZNF3952.485e-733.00zinc finger protein 395 [Source:HGNC Symbol;Acc:HG... [more]
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BLAST of Zinc finger protein, putative vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger protein, putative vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Glut4EF3.719e-1060.98gene:FBgn0267336 transcript:FBtr0305157[more]
Glut4EF3.719e-1060.98gene:FBgn0267336 transcript:FBtr0112577[more]
Glut4EF3.859e-1060.98gene:FBgn0267336 transcript:FBtr0333686[more]
Glut4EF3.859e-1060.98gene:FBgn0267336 transcript:FBtr0112576[more]
Glut4EF1.336e-962.50gene:FBgn0267336 transcript:FBtr0333685[more]
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BLAST of Zinc finger protein, putative vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:rp71-79p20.23.953e-950.00si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-8... [more]
si:rp71-79p20.24.497e-950.00si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-8... [more]
AL954725.14.625e-950.00si:rp71-79p20.2 [Source:NCBI gene;Acc:368491][more]
si:rp71-79p20.26.406e-950.00si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-8... [more]
si:rp71-79p20.26.470e-950.00si:rp71-79p20.2 [Source:ZFIN;Acc:ZDB-GENE-030616-8... [more]
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BLAST of Zinc finger protein, putative vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
gzf11.561e-727.61GDNF inducible zinc finger protein 1 [Source:Xenba... [more]
galnt161.556e-664.29polypeptide N-acetylgalactosaminyltransferase 16 [... [more]
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BLAST of Zinc finger protein, putative vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Zfp3955.306e-857.89zinc finger protein 395 [Source:MGI Symbol;Acc:MGI... [more]
Zfp7049.510e-864.29zinc finger protein 704 [Source:MGI Symbol;Acc:MGI... [more]
Zfp7041.645e-764.29zinc finger protein 704 [Source:MGI Symbol;Acc:MGI... [more]
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BLAST of Zinc finger protein, putative vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q6DFC8|ZN395_XENLA1.882e-728.36Zinc finger protein 395 OS=Xenopus laevis OX=8355 ... [more]
sp|Q9NR83|S2A4R_HUMAN2.067e-765.52SLC2A4 regulator OS=Homo sapiens OX=9606 GN=SLC2A4... [more]
sp|Q1LY51|ZN704_DANRE3.740e-755.26Zinc finger protein 704 OS=Danio rerio OX=7955 GN=... [more]
sp|Q9ERQ3|ZN704_MOUSE6.652e-764.29Zinc finger protein 704 OS=Mus musculus OX=10090 G... [more]
sp|Q6ZNC4|ZN704_HUMAN7.487e-764.29Zinc finger protein 704 OS=Homo sapiens OX=9606 GN... [more]
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BLAST of Zinc finger protein, putative vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A443R9S23.907e-1062.00Zinc finger protein 704-like protein OS=Dinothromb... [more]
A0A3S4R6505.406e-1062.00Zinc finger protein 704-like protein OS=Dinothromb... [more]
A0A1J1J6X53.139e-950.85CLUMA_CG021018, isoform A OS=Clunio marinus OX=568... [more]
A0A0A9XUH73.823e-937.63Zinc finger protein 395 OS=Lygus hesperus OX=30085... [more]
A0A0A9XSB44.257e-937.63Zinc finger protein 395 OS=Lygus hesperus OX=30085... [more]
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BLAST of Zinc finger protein, putative vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
znf395a1.156e-833.59zinc finger protein 395-like [Source:NCBI gene;Acc... [more]
si:rp71-79p20.21.197e-853.66zinc finger protein 704-like [Source:NCBI gene;Acc... [more]
si:rp71-79p20.21.385e-853.66zinc finger protein 704-like [Source:NCBI gene;Acc... [more]
znf395b2.306e-762.07zinc finger protein 395 [Source:NCBI gene;Acc:1030... [more]
znf7043.607e-754.05zinc finger protein 704 [Source:NCBI gene;Acc:5600... [more]
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BLAST of Zinc finger protein, putative vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ZNF7042.271e-938.10zinc finger protein 704 [Source:HGNC Symbol;Acc:HG... [more]
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BLAST of Zinc finger protein, putative vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger protein, putative vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger protein, putative vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:rp71-79p20.21.781e-855.26SLC2A4 regulator [Source:NCBI gene;Acc:105354393][more]
si:rp71-79p20.22.016e-855.26SLC2A4 regulator [Source:NCBI gene;Acc:105354393][more]
znf395a3.175e-847.27zinc finger protein 395 [Source:NCBI gene;Acc:1011... [more]
znf7045.038e-854.29zinc finger protein 704 [Source:NCBI gene;Acc:1011... [more]
znf7045.324e-862.07zinc finger protein 704 [Source:NCBI gene;Acc:1011... [more]
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BLAST of Zinc finger protein, putative vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000025870.10.000e+099.09SMESG000025870.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30033476 ID=SMED30033476|Name=Zinc finger protein, putative|organism=Schmidtea mediterranea sexual|type=transcript|length=1482bp
GTTCAAATTAAGTTAGTTTTCAACACTTCCCAAATCACTCCATGTTTCCT
GTCAAAGGAACTACAGTTTGGGTAAATTTCAAAGACAAGCCTTACCTAGG
AAAAGTTTTACAAACCAGTCCCGAACTTGATATGGTTTGTGTTAGAATTT
CAAACTATTTGGATCACGTTTCACGAGATATCGATAAAACTGACTTAGTT
GCTCACTCGTGTCCGGTTTCAAATCCATCGTTGTTTTCCAATCGCCAATC
ATCAGTGGTTATAACTTGCGGACTAGCGGATATCTGTCGTGTCGAACCGA
AAAACGATCCCCATTTTGAAAAGAATCGCCACGAATCAACAAACGATAGT
AATTCGGAAATTGTCATAGAATCGAATCCGGTACATATTCCAAAAACATC
CGAAAATCGTGATTCGAAAGATGGCCAGTCTTCTAGAAATAACTCACAGA
TTTCCAATTCTCCCGAAGACGACGCCGATTGGTTAGACTCCTTCGCTATC
AAAAAATTGTTGAAAAATTCTGAATCTGACAATAATAAACCATTCACTTT
CAATAATAAATACTGGGTATGTTGGCATTGCCATGTCTATTTATCGGATG
AACATGAAATGAATTTGCATGTAATTAATAAGCACAAACTGGAAGCTCTC
GTAGATAAAGATAATTGGATAGTTCTAGGAGGAATTAAGGGTCTGGACTA
TGATGAAGTGAAATCTCAAGAAGATAGCAATATCAAGGACCTTGATAATA
TTCACATCTCGTCTATATCAAGGAAACGACAGTTTCTCGAATCTACTTCC
GGTTTAAGTAACAGCTTAACAAACTCTAACGAATTCTATAGTCAGTCGTA
TTGTAACTCTACCAAATCGTTCGCAACCCAAAATGATTTTGAAACAAGTT
TTAATGATTTTAGGTGTCACGAGTTTTCAAGGGCAAACGTAGCGAAAAAA
GTTAACAATATCGAACACTTTGAAGGAACTTTGAGTTCTTCCTTCAACAA
CCGAGTTCTCAATAACGAATTTAGCACCCTCACAAATGAAAAGATCCAGT
TATTTCACAATATTTTATTGCGACATCATGTAAGTTCTTCGTTTTCTAAT
TCGCTGACGAAGCCGTCAAATTTTGACCAATGGCCTCATAGACTTAGATC
GAATTCCGACCAATTAATTTCCAGCCTCAATCAAATCAGCAACGGCATAC
AAAATGAGACTGAAATGTTGACTCCTACCAAACGAAGTCGAGTAGAAACT
GGAACTAAAAAGTGTCGCAAGATGTATGGAATAGACCAAAGACATTTGTG
GTGTAATCAATGTAAATGGAAAAAGGCTTGTTCAAGATTTTCGAGCGAAA
TAAATTAAAAGTAGACACTGATTCTTTATTCATATCATACAGATTGGATT
GCAAATGGGATTTAATTGAATAGTTATCAGTTTCAATGGACTTTAATATA
TAAAAAGTTGGATTTTAATTTTATCAAATGCG
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protein sequence of SMED30033476-orf-1

>SMED30033476-orf-1 ID=SMED30033476-orf-1|Name=SMED30033476-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=439bp
MFPVKGTTVWVNFKDKPYLGKVLQTSPELDMVCVRISNYLDHVSRDIDKT
DLVAHSCPVSNPSLFSNRQSSVVITCGLADICRVEPKNDPHFEKNRHEST
NDSNSEIVIESNPVHIPKTSENRDSKDGQSSRNNSQISNSPEDDADWLDS
FAIKKLLKNSESDNNKPFTFNNKYWVCWHCHVYLSDEHEMNLHVINKHKL
EALVDKDNWIVLGGIKGLDYDEVKSQEDSNIKDLDNIHISSISRKRQFLE
STSGLSNSLTNSNEFYSQSYCNSTKSFATQNDFETSFNDFRCHEFSRANV
AKKVNNIEHFEGTLSSSFNNRVLNNEFSTLTNEKIQLFHNILLRHHVSSS
FSNSLTKPSNFDQWPHRLRSNSDQLISSLNQISNGIQNETEMLTPTKRSR
VETGTKKCRKMYGIDQRHLWCNQCKWKKACSRFSSEIN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000026gut
PLANA:0000070intestinal phagocyte
PLANA:0002142parenchyma
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01366c_clamp_2coord: 405..435
e-value: 3.6E-13
score: 59.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..145
NoneNo IPR availablePANTHERPTHR13006PAPILLOMAVIRUS REGULATORY FACTOR PRF-1coord: 269..434