NADH-quinone oxidoreductase subunit NuoE

Overview
NameNADH-quinone oxidoreductase subunit NuoE
Smed IDSMED30033427
Length (bp)768
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Anatomical Expression

PAGE et. al., 2020



SMED30033427

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
copulatory apparatusSMED30033427 Contig6679newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
copulatory apparatusSMED30033427 Contig6679uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Human
Match: NDUFV2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717])

HSP 1 Score: 131.724 bits (330), Expect = 1.041e-36
Identity = 59/129 (45.74%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    V  YPE    +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  +++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   62 RIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 190
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Human
Match: NDUFV2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717])

HSP 1 Score: 131.339 bits (329), Expect = 1.346e-36
Identity = 59/129 (45.74%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    V  YPE    +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  +++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   65 RIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 193
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Human
Match: NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708])

HSP 1 Score: 89.7373 bits (221), Expect = 7.289e-20
Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RII QC++  +  PG +  D+ KV+PP RA M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  334 VEEMRQSLRIIAQCLN--KMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 425
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Human
Match: NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708])

HSP 1 Score: 89.3521 bits (220), Expect = 7.997e-20
Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RII QC++  +  PG +  D+ KV+PP RA M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  334 VEEMRQSLRIIAQCLN--KMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 425
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Celegans
Match: F53F4.10 (Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20719])

HSP 1 Score: 125.946 bits (315), Expect = 4.887e-35
Identity = 60/159 (37.74%), Postives = 90/159 (56.60%), Query Frame = 1 
Query:  217 KGEHDGYRFWRDRPMSECKIKDRFAKE--------VAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            +G   G    RD   +   +K +F  E        +  YPE     A++  L + Q++ G++       +A  L +P M  +EV +FY M+N++PVGKY L VC   PC LR  ++    +E+KLG+  GETTKDGLFTL + ECLGAC ++P++ +ND
Sbjct:   21 RGGATGLMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHGWLPISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITETIEKKLGIHAGETTKDGLFTLAEVECLGACVNAPMIQIND 179
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Celegans
Match: gas-1 (Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93873])

HSP 1 Score: 85.1149 bits (209), Expect = 7.040e-19
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            +EE+ QS  I+ QC++  +   G +  D+HKV PP RA M   ME LIHHFK F+EGF VPPG  Y  +E PKGE   Y
Sbjct:  353 IEEMRQSLNIVHQCLN--KMPAGEIKVDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVY 429

HSP 2 Score: 26.9498 bits (58), Expect = 7.040e-19
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2 
Query:  221 VSTMDIVFGEIDR 259
            + TMDIVFGE+DR
Sbjct:  470 IGTMDIVFGEVDR 482
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Celegans
Match: nduf-2.2 (NADH Ubiquinone oxidoreductase Fe-S protein [Source:UniProtKB/TrEMBL;Acc:Q22800])

HSP 1 Score: 84.7297 bits (208), Expect = 8.230e-19
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            +EE+ QS  I+ QC++  +   G + +D+HKV PP RA M   ME LIHHFK F+EGF VPPG  Y  +E PKGE   Y
Sbjct:  345 VEEMRQSLNIVHQCLN--KMPTGEIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVY 421

HSP 2 Score: 26.5646 bits (57), Expect = 8.230e-19
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2 
Query:  221 VSTMDIVFGEIDR 259
            + TMDIVFGE+DR
Sbjct:  462 IGTMDIVFGEVDR 474
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Celegans
Match: nduf-2.2 (NADH Ubiquinone oxidoreductase Fe-S protein [Source:UniProtKB/TrEMBL;Acc:Q22800])

HSP 1 Score: 84.7297 bits (208), Expect = 8.230e-19
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            +EE+ QS  I+ QC++  +   G + +D+HKV PP RA M   ME LIHHFK F+EGF VPPG  Y  +E PKGE   Y
Sbjct:  345 VEEMRQSLNIVHQCLN--KMPTGEIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVY 421

HSP 2 Score: 26.5646 bits (57), Expect = 8.230e-19
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2 
Query:  221 VSTMDIVFGEIDR 259
            + TMDIVFGE+DR
Sbjct:  462 IGTMDIVFGEVDR 474
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Fly
Match: ND-24 (gene:FBgn0030853 transcript:FBtr0340622)

HSP 1 Score: 116.316 bits (290), Expect = 2.973e-31
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 1 
Query:  247 RDRPMSECKIKDRFAKEVAK--------YPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            RD P     I   F  E  K        YPE   + A++  L + Q++ G++      ++A+ L +P M V+EV +FY M+ +KP GKY + VCT  PC LR     L   +++LG+ +G+TTKD  FT+ + ECLGAC ++P++ +ND
Sbjct:   35 RDTPEDNPNIPFEFTAENKKRVEAILSIYPEGHKRGAMIPLLDLAQRQYGWLPISAMHKVAEILQLPNMRVYEVATFYTMFMRKPTGKYHIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPMVAIND 183
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Fly
Match: ND-24 (gene:FBgn0030853 transcript:FBtr0074452)

HSP 1 Score: 116.316 bits (290), Expect = 2.973e-31
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 1 
Query:  247 RDRPMSECKIKDRFAKEVAK--------YPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            RD P     I   F  E  K        YPE   + A++  L + Q++ G++      ++A+ L +P M V+EV +FY M+ +KP GKY + VCT  PC LR     L   +++LG+ +G+TTKD  FT+ + ECLGAC ++P++ +ND
Sbjct:   35 RDTPEDNPNIPFEFTAENKKRVEAILSIYPEGHKRGAMIPLLDLAQRQYGWLPISAMHKVAEILQLPNMRVYEVATFYTMFMRKPTGKYHIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPMVAIND 183
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Fly
Match: ND-24L (gene:FBgn0036706 transcript:FBtr0075249)

HSP 1 Score: 101.293 bits (251), Expect = 1.304e-25
Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    +A YP+ + + A++  L I Q++ G++S    Q +A+ + +  M   E   FY M+  KP GKY ++VCT+ PC+LR G       ++ L ++ G+TT D  FTL++  C+GAC ++PV+ VND
Sbjct:   43 RVKALLAWYPQAEWKGALLPLLDIAQRQQGWLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTTPDMQFTLKEDYCMGACVNAPVLAVND 171
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Fly
Match: ND-49 (gene:FBgn0039909 transcript:FBtr0333676)

HSP 1 Score: 90.5077 bits (223), Expect = 1.552e-20
Identity = 55/122 (45.08%), Postives = 69/122 (56.56%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNP-GPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIKDRFAKEVAKYPENQAQSAVMACLAIV 357
            +EE+ QS RII QC   L Q P G + TD+ KVAPP R+ M   ME LIHHFKLF++G+ VPPG  Y A+E PKGE   Y       RP   CKIK      +A   +   Q  +   +AI+
Sbjct:  339 VEEMRQSLRIIDQC---LNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPY-RCKIKAPGFAHLAALEKIGKQHMLADVVAII 456
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Fly
Match: ND-49 (gene:FBgn0039909 transcript:FBtr0089105)

HSP 1 Score: 90.5077 bits (223), Expect = 1.552e-20
Identity = 55/122 (45.08%), Postives = 69/122 (56.56%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNP-GPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIKDRFAKEVAKYPENQAQSAVMACLAIV 357
            +EE+ QS RII QC   L Q P G + TD+ KVAPP R+ M   ME LIHHFKLF++G+ VPPG  Y A+E PKGE   Y       RP   CKIK      +A   +   Q  +   +AI+
Sbjct:  339 VEEMRQSLRIIDQC---LNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPY-RCKIKAPGFAHLAALEKIGKQHMLADVVAII 456
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Zebrafish
Match: ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713])

HSP 1 Score: 118.242 bits (295), Expect = 6.983e-32
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 1 
Query:  232 GYRFWRDRPMSECKIKDRFAKE--------VAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            G    RD P +       F  E        +  YPE    +A +  L + Q++ G++      ++A+ LG+  M V+EV +FY M+ ++PVGKY + +CT  PC L    S L  ++ KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   32 GIFVHRDTPENNPDTPFEFTPENMKRVEAIINNYPEGHKAAATIPVLDLAQRQNGWLPISAMNKVAEVLGIAPMRVYEVATFYTMFLRQPVGKYHIQICTTTPCMLCDSDSILEAIQNKLGIKVGETTADKLFTLTEVECLGACVNAPMVQIND 185
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Zebrafish
Match: ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273])

HSP 1 Score: 88.1965 bits (217), Expect = 1.567e-19
Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RI+ QC++  +  PG +  D+ K+APP R+ M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  335 VEEMRQSLRIMHQCLN--KMPPGEIKVDDAKIAPPKRSEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 426
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Xenopus
Match: prdm14 (PR domain 14 [Source:Xenbase;Acc:XB-GENE-954695])

HSP 1 Score: 127.872 bits (320), Expect = 1.255e-35
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    +  YPE     AV+  L + Q++ G++      ++A+ L MPAM V+EV +FY M+N+KPVGKY + +CT  PC L    S L  +E+KLG+ +GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   36 RIEAIIGNYPEGHKAGAVIPVLDLAQRQHGWLPISAMNKVAEVLEMPAMRVYEVATFYTMFNRKPVGKYHVQICTTTPCMLCNSDSILEAIEKKLGIHVGETTSDKLFTLTEVECLGACVNAPMVQIND 164
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Xenopus
Match: prdm14 (PR domain 14 [Source:Xenbase;Acc:XB-GENE-954695])

HSP 1 Score: 127.872 bits (320), Expect = 1.727e-35
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    +  YPE     AV+  L + Q++ G++      ++A+ L MPAM V+EV +FY M+N+KPVGKY + +CT  PC L    S L  +E+KLG+ +GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   45 RIEAIIGNYPEGHKAGAVIPVLDLAQRQHGWLPISAMNKVAEVLEMPAMRVYEVATFYTMFNRKPVGKYHVQICTTTPCMLCNSDSILEAIEKKLGIHVGETTSDKLFTLTEVECLGACVNAPMVQIND 173
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Xenopus
Match: prdm14 (PR domain 14 [Source:Xenbase;Acc:XB-GENE-954695])

HSP 1 Score: 127.872 bits (320), Expect = 2.120e-35
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    +  YPE     AV+  L + Q++ G++      ++A+ L MPAM V+EV +FY M+N+KPVGKY + +CT  PC L    S L  +E+KLG+ +GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   56 RIEAIIGNYPEGHKAGAVIPVLDLAQRQHGWLPISAMNKVAEVLEMPAMRVYEVATFYTMFNRKPVGKYHVQICTTTPCMLCNSDSILEAIEKKLGIHVGETTSDKLFTLTEVECLGACVNAPMVQIND 184
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 84.7297 bits (208), Expect = 3.260e-18
Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RII QC++  +   G +  D+ KV+PP R+ M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  311 VEEMRQSMRIILQCLN--KMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 402
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 84.7297 bits (208), Expect = 3.576e-18
Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RII QC++  +   G +  D+ KV+PP R+ M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  310 VEEMRQSMRIILQCLN--KMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 401
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Mouse
Match: Ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:MGI Symbol;Acc:MGI:1920150])

HSP 1 Score: 132.109 bits (331), Expect = 4.359e-37
Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    V  YPE    +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  L++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   61 RIEAIVKNYPEGHQAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 189
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Mouse
Match: Ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:MGI Symbol;Acc:MGI:1920150])

HSP 1 Score: 114.005 bits (284), Expect = 2.650e-31
Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 1 
Query:  394 QRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
             ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  L++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:    2 NKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 93
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Mouse
Match: Ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:MGI Symbol;Acc:MGI:2385112])

HSP 1 Score: 90.1225 bits (222), Expect = 3.214e-20
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RII+QC++  +  PG +  D+ KV+PP RA M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  308 VEEMRQSLRIIEQCLN--KMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 399
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Mouse
Match: Ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:MGI Symbol;Acc:MGI:2385112])

HSP 1 Score: 90.1225 bits (222), Expect = 3.502e-20
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RII+QC++  +  PG +  D+ KV+PP RA M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y       RP   CKIK
Sbjct:  334 VEEMRQSLRIIEQCLN--KMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY-RCKIK 425
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Mouse
Match: Ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:MGI Symbol;Acc:MGI:1920150])

HSP 1 Score: 69.707 bits (169), Expect = 1.731e-15
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:  397 RIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKL 567
            ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  L++KL
Sbjct:    3 KVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKL 59
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. UniProt/SwissProt
Match: sp|Q2YA24|NUOD_NITMU (NADH-quinone oxidoreductase subunit D OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=nuoD PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.487e-37
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            +EE  QSNRII+QCVDWLR+NPGPVITDNHKVAPP R +M   ME LIHHFKLF+EGFHVPPGE YAAVEHPKGE   Y
Sbjct:  286 IEEFRQSNRIIRQCVDWLRKNPGPVITDNHKVAPPSRVNMKQNMEELIHHFKLFTEGFHVPPGETYAAVEHPKGEFGIY 364
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. UniProt/SwissProt
Match: sp|Q21YC4|NUOD_RHOFT (NADH-quinone oxidoreductase subunit D OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=nuoD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.180e-36
Identity = 62/79 (78.48%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            MEE+ QSNRIIKQCVDWLR NPGPVITDNHK+APP+R SM   ME LIHHFKLFSEGF VP GEAYA +EHPKGE   Y
Sbjct:  286 MEEMKQSNRIIKQCVDWLRVNPGPVITDNHKIAPPNRESMKSNMEELIHHFKLFSEGFSVPEGEAYATIEHPKGEFGIY 364
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. UniProt/SwissProt
Match: sp|P19234|NDUV2_RAT (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.262e-36
Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 1 
Query:  280 DRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            +R    V  YPE    +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  L++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   60 ERIEAIVRNYPEGHRAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 189
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. UniProt/SwissProt
Match: sp|Q9D6J6|NDUV2_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.049e-36
Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    V  YPE    +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  L++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   61 RIEAIVKNYPEGHQAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 189
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. UniProt/SwissProt
Match: sp|P04394|NDUV2_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Bos taurus OX=9913 GN=NDUFV2 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.195e-36
Identity = 59/129 (45.74%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    V  YPE    +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN+KPVGKY + VCT  PC LR   S L  +++KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   62 RIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND 190
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. TrEMBL
Match: A0A1F4K9G2 (NADH dehydrogenase OS=Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 OX=1797566 GN=A3F78_11785 PE=4 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 4.084e-82
Identity = 119/145 (82.07%), Postives = 131/145 (90.34%), Query Frame = 1 
Query:  274 IKDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVNDRSMCSFMTQEKID 708
            IK RFAKEVAKYP  Q QSAVMACLAIVQQE GYVSA++E+ IAD+LGM  MAVHEVT+FYNMYNQ PVGKYKLNVCTNLPCQLR G  TL YLE+KLG++MGETT DGLFTLQQSECLGACADSPVMLVNDRSMCSFM++EK++
Sbjct:    6 IKTRFAKEVAKYPVEQKQSAVMACLAIVQQELGYVSADSEKVIADYLGMAPMAVHEVTTFYNMYNQHPVGKYKLNVCTNLPCQLRDGVKTLQYLEKKLGIRMGETTADGLFTLQQSECLGACADSPVMLVNDRSMCSFMSEEKLN 150
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. TrEMBL
Match: A0A5C7STG5 (NADH-quinone oxidoreductase subunit NuoE OS=Rhodoferax sp. OX=50421 GN=nuoE PE=4 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 6.971e-82
Identity = 116/145 (80.00%), Postives = 130/145 (89.66%), Query Frame = 1 
Query:  274 IKDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVNDRSMCSFMTQEKID 708
            +K RFA+EVAKYP  Q+QSAVMACL I+QQE GYVSAE+E  +A +LGMPAMAVHEVT+FYNMYNQ PVGKYKLNVCTNLPCQLR G  TL YLE+KLG+ MGETT DGLFTLQQSECLGACADSPVMLVNDR+MCSFM++E+ID
Sbjct:    6 MKARFAREVAKYPAEQSQSAVMACLTIIQQELGYVSAESEAELAAYLGMPAMAVHEVTTFYNMYNQAPVGKYKLNVCTNLPCQLRDGVKTLHYLEKKLGISMGETTADGLFTLQQSECLGACADSPVMLVNDRNMCSFMSEERID 150
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. TrEMBL
Match: A0A3E1RFX3 (NADH-quinone oxidoreductase subunit NuoE OS=Rhodoferax sp. IMCC26218 OX=2184758 GN=DIC66_06100 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.380e-80
Identity = 116/144 (80.56%), Postives = 128/144 (88.89%), Query Frame = 1 
Query:  277 KDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVNDRSMCSFMTQEKID 708
            K RFAKEVAKYP  QAQSAVMACL+IVQQE GYVS+E+E+ +ADFLGM  MAVHEVTSFYNMYNQKPVGK+KLNVCTNLPCQLR GQ  L +LE KLG+ MGETT DGLFTLQQSECLGACADSPV+LVNDR MCSFM+ +K+D
Sbjct:    7 KARFAKEVAKYPAEQAQSAVMACLSIVQQELGYVSSESEKVVADFLGMAPMAVHEVTSFYNMYNQKPVGKFKLNVCTNLPCQLRDGQKALHHLEHKLGIHMGETTSDGLFTLQQSECLGACADSPVLLVNDRKMCSFMSNDKLD 150
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. TrEMBL
Match: A0A515EQI3 (NADH-quinone oxidoreductase subunit E OS=Rhodoferax sp. Gr-4 OX=2527691 GN=nuoE PE=4 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.114e-80
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 1 
Query:  274 IKDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVNDRSMCSFMTQEKID 708
            IK RFA EVAKYP  Q+QSAVMACLAIVQQE GYVS ++E  IA +LGMP+MAVHEVT+FYNMYNQKPVGKYKLNVCTNLPCQLR G   L +LEQKLGVKMG+TT DG FTLQQSECLGACADSPVMLVNDR MCSFMT +K+D
Sbjct:    6 IKARFAVEVAKYPAEQSQSAVMACLAIVQQEYGYVSTDSETEIALYLGMPSMAVHEVTTFYNMYNQKPVGKYKLNVCTNLPCQLRDGSKALHFLEQKLGVKMGQTTSDGFFTLQQSECLGACADSPVMLVNDRHMCSFMTNDKLD 150
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. TrEMBL
Match: A0A1V4CBR7 (NADH dehydrogenase OS=Hydrogenophaga sp. H7 OX=1882399 GN=BC358_15670 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.076e-80
Identity = 116/144 (80.56%), Postives = 127/144 (88.19%), Query Frame = 1 
Query:  277 KDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVNDRSMCSFMTQEKID 708
            K RFA+EVAKYP  QAQSAVMACL+IVQQE GYVS   EQ IAD+LGMP MAVHEVT+FYNMYNQ+PVGKYKLNVCTNLPCQLR G + L +LE+KLG+ MGETT DGLFTLQQSECLGACADSPVMLVNDR MCSFM+ EK+D
Sbjct:    8 KARFAREVAKYPTEQAQSAVMACLSIVQQEQGYVSHAAEQAIADYLGMPVMAVHEVTTFYNMYNQRPVGKYKLNVCTNLPCQLREGYTALHHLEKKLGIAMGETTADGLFTLQQSECLGACADSPVMLVNDRHMCSFMSNEKLD 151
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Cavefish
Match: ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:NCBI gene;Acc:103038922])

HSP 1 Score: 118.627 bits (296), Expect = 4.687e-32
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    +  YP+   Q+A +  L + Q++ G++      ++A+ L +  M V+EV +FY M+N++PVGKY + VCT  PC L    S +  ++ KLG+K+GETT D LFTL + ECLGAC ++P++ +ND
Sbjct:   57 RVEAIINNYPQGHKQAATIPVLDLAQRQHGWLPISAMNKVAEILEIAPMRVYEVATFYTMFNRQPVGKYHIQVCTTTPCMLCDSDSIMQAIQNKLGIKVGETTPDKLFTLAEVECLGACVNAPMVQIND 185
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Cavefish
Match: ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:NCBI gene;Acc:103041339])

HSP 1 Score: 85.1149 bits (209), Expect = 1.385e-18
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RI+ QC++  +   G +  D+ KVAPP R+ M   ME LIHHFKL++EG+ VPPG  Y AVE PKGE   Y       RP   CKIK
Sbjct:  336 IEEMRQSLRIMHQCLN--KMPEGEIKVDDAKVAPPKRSEMKMSMESLIHHFKLYTEGYQVPPGATYTAVEAPKGEFGVYLVSDGSSRPY-RCKIK 427
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009790.1 (pep scaffold:Pmarinus_7.0:GL478625:8185:18459:-1 gene:ENSPMAG00000008846.1 transcript:ENSPMAT00000009790.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 120.168 bits (300), Expect = 2.074e-33
Identity = 53/129 (41.09%), Postives = 83/129 (64.34%), Query Frame = 1 
Query:  283 RFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            R    V  YP     +AV+  L + Q++ G++      ++A+ L +P M V+EV +FY MYN++P+GKY + VCT  PC L    S +  L++KLG+K+GETT D +FT+ + ECLGAC ++P++ +ND
Sbjct:   55 RIEVIVGNYPAEHKAAAVIPVLDLAQRQHGWLPISAMNKVAELLKIPKMRVYEVATFYTMYNRQPMGKYHIQVCTTTPCMLCNSDSIVEALKKKLGIKLGETTPDKMFTVTEVECLGACVNAPMVQIND 183
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Nematostella
Match: EDO45969 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRK0])

HSP 1 Score: 129.798 bits (325), Expect = 2.432e-37
Identity = 63/138 (45.65%), Postives = 87/138 (63.04%), Query Frame = 1 
Query:  259 MSECKIKDRFAKEVAKYPENQAQSAVMACLAIVQ-QECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
             +E  +K R    +  YP    ++AV+  L + Q Q  G++       +ADFL MP M V+EV +FY M+N++PVGKY + VCT  PCQLR     L  L+ KLG+K GET+KDG+FTL   ECLGAC ++P+M +ND
Sbjct:   31 FNEANLK-RAKSILNNYPTGHEKAAVIPLLDLAQRQHDGWLPISAMNYVADFLNMPRMRVYEVATFYTMFNREPVGKYHVQVCTTTPCQLRNADDLLDTLKSKLGIKEGETSKDGMFTLTVVECLGACVNAPMMQIND 167
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Nematostella
Match: EDO39377 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAD2])

HSP 1 Score: 85.5001 bits (210), Expect = 2.974e-19
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            MEE+ +S +II QC++  +  PG +  D+ K++PP R+ M   ME LIHHFKL++EG+ VPPG  Y A+E PKGE   Y
Sbjct:  283 MEEMRESLKIILQCLN--KMPPGEIKVDDAKISPPKRSEMKDSMESLIHHFKLYTEGYQVPPGGTYTAIEAPKGEFGVY 359
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Nematostella
Match: EDO25426 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DWI3])

HSP 1 Score: 77.7962 bits (190), Expect = 6.043e-18
Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGY 237
            +EE+ QS  I++QC+  ++  PG V  D+ K+ PP RA+M   ME LIHHFKL++EG+ +P   +Y+ VE PKGE   Y
Sbjct:   21 VEEMRQSLIIVQQCLVNIK--PGLVKVDDKKITPPSRANMKFSMESLIHHFKLYTEGYSLPVASSYSVVEAPKGEFGLY 97
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Medaka
Match: ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:NCBI gene;Acc:101172359])

HSP 1 Score: 119.398 bits (298), Expect = 2.265e-32
Identity = 53/131 (40.46%), Postives = 84/131 (64.12%), Query Frame = 1 
Query:  277 KDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            K R    ++ YPE   Q+A +  L + Q++ G++      ++A+ LG+  M V+EV +FY M+ ++PVGKY + +CT  PC L    S L  ++ KLG+K+GETT D +FTL + ECLGAC ++P++ +ND
Sbjct:   55 KKRIEAILSMYPEGHKQAATIPVLDLAQRQHGWLPISAMNKVAEVLGVAPMRVYEVATFYTMFLRQPVGKYFIQICTTTPCMLCNSDSILEAIQNKLGIKVGETTPDKMFTLIEVECLGACVNAPMVQIND 185
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Medaka
Match: ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2 [Source:NCBI gene;Acc:101172359])

HSP 1 Score: 119.013 bits (297), Expect = 2.984e-32
Identity = 53/131 (40.46%), Postives = 84/131 (64.12%), Query Frame = 1 
Query:  277 KDRFAKEVAKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            K R    ++ YPE   Q+A +  L + Q++ G++      ++A+ LG+  M V+EV +FY M+ ++PVGKY + +CT  PC L    S L  ++ KLG+K+GETT D +FTL + ECLGAC ++P++ +ND
Sbjct:   59 KKRIEAILSMYPEGHKQAATIPVLDLAQRQHGWLPISAMNKVAEVLGVAPMRVYEVATFYTMFLRQPVGKYFIQICTTTPCMLCNSDSILEAIQNKLGIKVGETTPDKMFTLIEVECLGACVNAPMVQIND 189
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Medaka
Match: ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:NCBI gene;Acc:101168577])

HSP 1 Score: 80.8777 bits (198), Expect = 3.925e-17
Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
            +EE+ QS RI+ + ++  +   G +  D+ KVAPP R+ M   ME LIHHFKL++EG+ VPPG  Y AVE PKGE   Y       RP   CKIK
Sbjct:  337 VEEMRQSLRIMHEALN--KMPEGEIKVDDAKVAPPKRSEMKTSMESLIHHFKLYTEGYQVPPGATYTAVEAPKGEFGVYLVSDGSSRPY-RCKIK 428
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Planmine SMEST
Match: SMESG000068585.1 (SMESG000068585.1)

HSP 1 Score: 115.161 bits (287), Expect = 6.272e-31
Identity = 59/151 (39.07%), Postives = 85/151 (56.29%), Query Frame = 1 
Query:  247 RDRPMSECKIKDRFAKEVAK--------YPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTSFYNMYNQKPVGKYKLNVCTNLPCQLR--AGQSTLAYLEQKLGVKMGETTKDGLFTLQQSECLGACADSPVMLVND 669
            RD P +  K    F+ E  K        YPE    SA++  L + Q++ G++      ++A+ L MP M V+EV +FY M+N+ PVGKY + +CT  PC L        L  +E+ LG+K G TT D  FTL + ECLGAC ++P+M +ND
Sbjct:   28 RDSPENNAKTPFEFSPENLKKVEIIKSNYPEGHQNSALIPVLDLAQRQHGWLPISAMNKVAEILDMPRMRVYEVATFYTMFNRNPVGKYHVQLCTCSPCILGGIGSDKILDSIEKTLGIKPGHTTPDKKFTLSEVECLGACVNAPMMAIND 178
[Close]
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Planmine SMEST
Match: SMESG000024322.1 (SMESG000024322.1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.399e-21
Identity = 47/95 (49.47%), Postives = 60/95 (63.16%), Query Frame = 1 
Query:    1 MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHHFKLFSEGFHVPPGEAYAAVEHPKGEHDGYRF--WRDRPMSECKIK 279
             EE+ QS RI+ QC++  +  PG +  D+HK+ PP R+ M   ME LIHHFKLF+EG+ VPPG  Y A+E PKGE   Y      +RP   CKIK
Sbjct:  327 FEEMRQSIRIMLQCMN--KMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPY-RCKIK 418
The following BLAST results are available for this feature:
BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
NDUFV21.041e-3645.74NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
NDUFV21.346e-3645.74NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
NDUFS27.289e-2050.53NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
NDUFS27.997e-2050.53NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4
Match NameE-valueIdentityDescription
F53F4.104.887e-3537.74Probable NADH dehydrogenase [ubiquinone] flavoprot... [more]
gas-17.040e-1950.63Probable NADH dehydrogenase [ubiquinone] iron-sulf... [more]
nduf-2.28.230e-1950.63NADH Ubiquinone oxidoreductase Fe-S protein [Sour... [more]
nduf-2.28.230e-1950.63NADH Ubiquinone oxidoreductase Fe-S protein [Sour... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ND-242.973e-3136.91gene:FBgn0030853 transcript:FBtr0340622[more]
ND-242.973e-3136.91gene:FBgn0030853 transcript:FBtr0074452[more]
ND-24L1.304e-2536.43gene:FBgn0036706 transcript:FBtr0075249[more]
ND-491.552e-2045.08gene:FBgn0039909 transcript:FBtr0333676[more]
ND-491.552e-2045.08gene:FBgn0039909 transcript:FBtr0089105[more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ndufv26.983e-3237.01NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
ndufs21.567e-1948.42NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
prdm141.255e-3544.19PR domain 14 [Source:Xenbase;Acc:XB-GENE-954695][more]
prdm141.727e-3544.19PR domain 14 [Source:Xenbase;Acc:XB-GENE-954695][more]
prdm142.120e-3544.19PR domain 14 [Source:Xenbase;Acc:XB-GENE-954695][more]
b3gat33.260e-1848.42beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
b3gat33.576e-1848.42beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ndufv24.359e-3746.51NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
Ndufv22.650e-3154.35NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
Ndufs23.214e-2050.53NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
Ndufs23.502e-2050.53NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
Ndufv21.731e-1552.63NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q2YA24|NUOD_NITMU1.487e-3778.48NADH-quinone oxidoreductase subunit D OS=Nitrososp... [more]
sp|Q21YC4|NUOD_RHOFT2.180e-3678.48NADH-quinone oxidoreductase subunit D OS=Rhodofera... [more]
sp|P19234|NDUV2_RAT2.262e-3646.15NADH dehydrogenase [ubiquinone] flavoprotein 2, mi... [more]
sp|Q9D6J6|NDUV2_MOUSE3.049e-3646.51NADH dehydrogenase [ubiquinone] flavoprotein 2, mi... [more]
sp|P04394|NDUV2_BOVIN3.195e-3645.74NADH dehydrogenase [ubiquinone] flavoprotein 2, mi... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1F4K9G24.084e-8282.07NADH dehydrogenase OS=Burkholderiales bacterium RI... [more]
A0A5C7STG56.971e-8280.00NADH-quinone oxidoreductase subunit NuoE OS=Rhodof... [more]
A0A3E1RFX31.380e-8080.56NADH-quinone oxidoreductase subunit NuoE OS=Rhodof... [more]
A0A515EQI32.114e-8080.69NADH-quinone oxidoreductase subunit E OS=Rhodofera... [more]
A0A1V4CBR74.076e-8080.56NADH dehydrogenase OS=Hydrogenophaga sp. H7 OX=188... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ndufv24.687e-3240.31NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
ndufs21.385e-1849.47NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000009790.12.074e-3341.09pep scaffold:Pmarinus_7.0:GL478625:8185:18459:-1 g... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO459692.432e-3745.65Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO393772.974e-1949.37Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO254266.043e-1846.84Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ndufv22.265e-3240.46NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
ndufv22.984e-3240.46NADH:ubiquinone oxidoreductase core subunit V2 [So... [more]
ndufs23.925e-1747.37NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of NADH-quinone oxidoreductase subunit NuoE vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000068585.16.272e-3139.07SMESG000068585.1[more]
SMESG000024322.13.399e-2149.47SMESG000024322.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30033427 ID=SMED30033427|Name=NADH-quinone oxidoreductase subunit NuoE|organism=Schmidtea mediterranea sexual|type=transcript|length=768bp
ATGGAAGAGCTGATCCAATCGAATCGCATCATTAAACAATGTGTGGATTG
GTTGCGTCAAAACCCAGGGCCCGTGATCACCGATAACCATAAAGTGGCGC
CACCTGATCGCGCTTCGATGCACGGCGAAATGGAGGGGCTGATTCACCAC
TTCAAATTGTTCAGTGAAGGTTTTCATGTGCCGCCCGGAGAAGCTTATGC
GGCGGTTGAGCATCCCAAGGGTGAGCACGATGGATATCGTTTTTGGAGAG
ATAGACCGATGAGCGAGTGCAAAATAAAAGATAGATTCGCCAAAGAAGTG
GCTAAATATCCCGAGAATCAAGCACAGTCAGCCGTGATGGCGTGTTTGGC
CATTGTTCAGCAAGAGTGCGGTTATGTGAGCGCTGAAAATGAGCAACGCA
TCGCCGACTTTTTAGGTATGCCAGCCATGGCTGTACACGAAGTGACGAGT
TTTTATAACATGTACAACCAAAAACCGGTTGGCAAATATAAGCTTAATGT
GTGCACGAATCTGCCGTGTCAACTGCGTGCTGGGCAATCAACGCTGGCTT
ATTTAGAGCAAAAGTTGGGCGTGAAAATGGGTGAAACAACCAAAGATGGG
TTGTTCACTTTGCAGCAAAGTGAATGTTTGGGTGCTTGTGCCGATTCACC
CGTGATGCTGGTTAATGACCGCTCAATGTGCAGTTTTATGACGCAAGAAA
AAATTGATTCGCTATTGAGCGAGTTGAAAGAGTTAGAAAAAACCAATCAT
GCGGAGGCGGTTAAATGA
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protein sequence of SMED30033427-orf-1

>SMED30033427-orf-1 ID=SMED30033427-orf-1|Name=SMED30033427-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=256bp
MEELIQSNRIIKQCVDWLRQNPGPVITDNHKVAPPDRASMHGEMEGLIHH
FKLFSEGFHVPPGEAYAAVEHPKGEHDGYRFWRDRPMSECKIKDRFAKEV
AKYPENQAQSAVMACLAIVQQECGYVSAENEQRIADFLGMPAMAVHEVTS
FYNMYNQKPVGKYKLNVCTNLPCQLRAGQSTLAYLEQKLGVKMGETTKDG
LFTLQQSECLGACADSPVMLVNDRSMCSFMTQEKIDSLLSELKELEKTNH
AEAVK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0050136NADH dehydrogenase (quinone) activity
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:0051287NAD binding
GO:0048038quinone binding
GO:0016491oxidoreductase activity
GO:0046872metal ion binding
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR001135NADH_Q_OxRdtase_suD
IPR029014NiFe-Hase_large
Vocabulary: biological process
TermDefinition
GO:0055114oxidation-reduction process