CLIP-associating protein 1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30033412 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of CLIP-associating protein 1 vs. Ensembl Human
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 280.796 bits (717), Expect = 3.882e-76 Identity = 231/771 (29.96%), Postives = 371/771 (48.12%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKEL--------------------------LSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNF---------------TGRTRVNSAKSENPSANSSTEYLYSKQQSNF-GWRAAKPKT-------ATARIDTSDPRG--RIQKVSQSQPSTRDPSP------------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L LS K S ++ +T S+ S+ +G T +SA + P + +S E + ++ + G + + +T AT T D RG R + VSQSQP +R SP S K I S G S N Q P + +++R E VA+ L + R + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLESRHMREDMEYIGLDSGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1059 HSP 2 Score: 167.548 bits (423), Expect = 5.750e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1220 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1460
BLAST of CLIP-associating protein 1 vs. Ensembl Human
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 278.485 bits (711), Expect = 2.101e-75 Identity = 230/772 (29.79%), Postives = 367/772 (47.54%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKEL--------------------------LSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNF---------------TGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQK--VSQSQPS---------TRDPSP------------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L LS K S ++ +T S+ S+ +G T +SA + P + +S + +K + R +AT T D RGR + VSQSQ S +R SP S K I S G S N Q P + +++R E VA+ L + R + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLDGTTTKAEGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1060 HSP 2 Score: 167.933 bits (424), Expect = 4.731e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1221 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1461
BLAST of CLIP-associating protein 1 vs. Ensembl Human
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 273.863 bits (699), Expect = 5.734e-74 Identity = 230/773 (29.75%), Postives = 367/773 (47.48%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKEL--------------------------LSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNF---------------TGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQK--VSQSQPS---------TRDPSP------------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L LS K S ++ +T S+ S+ +G T +SA + P + +S + +K + R +AT T D RGR + VSQSQ S +R SP S K I S G S N Q P + +++R E VA+ L + R + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLDGTTTKAEGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1061 HSP 2 Score: 167.548 bits (423), Expect = 4.940e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1222 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1462
BLAST of CLIP-associating protein 1 vs. Ensembl Human
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 271.166 bits (692), Expect = 3.525e-73 Identity = 230/773 (29.75%), Postives = 369/773 (47.74%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKEL--------------------------LSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNF---------------TGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRG--RIQKVSQSQPS---------TRDPSP------------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L LS K S ++ +T S+ S+ +G T +SA + P + +S + +++QS+ +AT T D RG R + VSQSQ S +R SP S K I S G S N Q P + +++R E VA+ L + R + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSS--------GSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1053 HSP 2 Score: 167.933 bits (424), Expect = 4.550e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1214 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1454
BLAST of CLIP-associating protein 1 vs. Ensembl Human
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 264.233 bits (674), Expect = 2.861e-71 Identity = 233/796 (29.27%), Postives = 370/796 (46.48%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKEL--------------------------LSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNF---------------TGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQK--VSQSQPS---------TRDPSP------------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL---------KKSRR--NSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQ------------------------TVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L LS K S ++ +T S+ S+ +G T +SA + P + +S + +++QS+ +AT T D RGR + VSQSQ S +R SP S K I S G S N Q P + +++R E VA+ L K RR + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + T V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 72 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSS--------GSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKIADSEAECEDKEGNLFPSEVSCTRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 857 HSP 2 Score: 167.933 bits (424), Expect = 3.628e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1018 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1258
BLAST of CLIP-associating protein 1 vs. Ensembl Celegans
Match: cls-2 (pep chromosome:WBcel235:III:9055052:9058849:1 gene:WBGene00000549.1 transcript:R107.6b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cls-2) HSP 1 Score: 160.614 bits (405), Expect = 1.734e-39 Identity = 170/696 (24.43%), Postives = 303/696 (43.53%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLH--ADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLD--LEIKNC----VSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS---ADVFKVPITNAVKTTVKSVTSKPSNFTGR-----------TRVNSAKSENPSANSSTEYLYSK-QQSNFGWRAAKPKT-ATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVA-----EGLKKSRRNSHDHY------QSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDL-RKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPT 2186
+EISS + +E L L +DW R++ L+ +R ++ +D + + L + + +C V DLRSQ++REA IT FL K + E+ + S V+ K+M+T G V +IV + +I + ++ RQ C+ LL+++ E+WN K I E IK I DAD +TR R+AF + +KL S+D +KQK L+ + I+S F+ ++ +++ + S F + TR+ ++ S P+ T SK S G + A+P A +S+ R R V SQP +R+ SP + T + A + +N S + SSL ++A + Q A E L++ RN D + T + S++ + ++ EV+ +S + N+++ G+ ++E +L E K+L + N + E+ ++ L + +FV +H L DWL + KL + E +SK +I ++ ++ ++ + C+ V D + + K R+ LLEY+ +L N ++ + + W A+ ++ L ++ LF LN + FS L ++D A +L ++ Q V + S+ R T+ T
Sbjct: 31 MEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHG----EDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCA-LLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKMLRASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRAR-GSVPTSQPGSRNGSPP-RRPSATEAFPAEMQRVKSNL---GSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRNDDDEFLLPKRPTPQKATPQKSALDTSRV---EEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIKSLGAVLNRLLGESTNQIV---LESISSFVKTHHPRLSDWLKLGLGKLFAKKGAEMTLNSKKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWAYKVLQSH-GHDQHVPQQDAVSEEACVRATISTT 709 HSP 2 Score: 63.5438 bits (153), Expect = 1.094e-9 Identity = 53/225 (23.56%), Postives = 104/225 (46.22%), Query Frame = 3
Query: 2922 NDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKA-AEECSRVLTSTMP--RKVCLKMLI--DVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWS--LLKLNNSQARLLEVYIKKGGS 3575
D ++ L + M E + T W+++F LL + + + +E D A LRVL ++ SQA R + T++ I KVL+A + + + A++C + L + +P + V + LI + + + + LKM+ +L + + + V++L + + S VRK +V C+V + +G L L++ + L++VY+ + S
Sbjct: 800 GDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVA--------LRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLILNEYLQEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMS 1016
BLAST of CLIP-associating protein 1 vs. Ensembl Celegans
Match: cls-2 (pep chromosome:WBcel235:III:9055052:9058882:1 gene:WBGene00000549.1 transcript:R107.6b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cls-2) HSP 1 Score: 160.614 bits (405), Expect = 1.734e-39 Identity = 170/696 (24.43%), Postives = 303/696 (43.53%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLH--ADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLD--LEIKNC----VSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS---ADVFKVPITNAVKTTVKSVTSKPSNFTGR-----------TRVNSAKSENPSANSSTEYLYSK-QQSNFGWRAAKPKT-ATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVA-----EGLKKSRRNSHDHY------QSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDL-RKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPT 2186
+EISS + +E L L +DW R++ L+ +R ++ +D + + L + + +C V DLRSQ++REA IT FL K + E+ + S V+ K+M+T G V +IV + +I + ++ RQ C+ LL+++ E+WN K I E IK I DAD +TR R+AF + +KL S+D +KQK L+ + I+S F+ ++ +++ + S F + TR+ ++ S P+ T SK S G + A+P A +S+ R R V SQP +R+ SP + T + A + +N S + SSL ++A + Q A E L++ RN D + T + S++ + ++ EV+ +S + N+++ G+ ++E +L E K+L + N + E+ ++ L + +FV +H L DWL + KL + E +SK +I ++ ++ ++ + C+ V D + + K R+ LLEY+ +L N ++ + + W A+ ++ L ++ LF LN + FS L ++D A +L ++ Q V + S+ R T+ T
Sbjct: 31 MEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHG----EDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCA-LLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKMLRASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRAR-GSVPTSQPGSRNGSPP-RRPSATEAFPAEMQRVKSNL---GSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRNDDDEFLLPKRPTPQKATPQKSALDTSRV---EEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIKSLGAVLNRLLGESTNQIV---LESISSFVKTHHPRLSDWLKLGLGKLFAKKGAEMTLNSKKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWAYKVLQSH-GHDQHVPQQDAVSEEACVRATISTT 709 HSP 2 Score: 63.5438 bits (153), Expect = 1.094e-9 Identity = 53/225 (23.56%), Postives = 104/225 (46.22%), Query Frame = 3
Query: 2922 NDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKA-AEECSRVLTSTMP--RKVCLKMLI--DVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWS--LLKLNNSQARLLEVYIKKGGS 3575
D ++ L + M E + T W+++F LL + + + +E D A LRVL ++ SQA R + T++ I KVL+A + + + A++C + L + +P + V + LI + + + + LKM+ +L + + + V++L + + S VRK +V C+V + +G L L++ + L++VY+ + S
Sbjct: 800 GDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVA--------LRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLILNEYLQEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMS 1016
BLAST of CLIP-associating protein 1 vs. Ensembl Celegans
Match: cls-2 (pep chromosome:WBcel235:III:9055052:9058843:1 gene:WBGene00000549.1 transcript:R107.6a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cls-2) HSP 1 Score: 160.229 bits (404), Expect = 2.063e-39 Identity = 170/696 (24.43%), Postives = 303/696 (43.53%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLH--ADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLD--LEIKNC----VSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS---ADVFKVPITNAVKTTVKSVTSKPSNFTGR-----------TRVNSAKSENPSANSSTEYLYSK-QQSNFGWRAAKPKT-ATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVA-----EGLKKSRRNSHDHY------QSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDL-RKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPT 2186
+EISS + +E L L +DW R++ L+ +R ++ +D + + L + + +C V DLRSQ++REA IT FL K + E+ + S V+ K+M+T G V +IV + +I + ++ RQ C+ LL+++ E+WN K I E IK I DAD +TR R+AF + +KL S+D +KQK L+ + I+S F+ ++ +++ + S F + TR+ ++ S P+ T SK S G + A+P A +S+ R R V SQP +R+ SP + T + A + +N S + SSL ++A + Q A E L++ RN D + T + S++ + ++ EV+ +S + N+++ G+ ++E +L E K+L + N + E+ ++ L + +FV +H L DWL + KL + E +SK +I ++ ++ ++ + C+ V D + + K R+ LLEY+ +L N ++ + + W A+ ++ L ++ LF LN + FS L ++D A +L ++ Q V + S+ R T+ T
Sbjct: 31 MEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHG----EDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCA-LLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKMLRASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRAR-GSVPTSQPGSRNGSPP-RRPSATEAFPAEMQRVKSNL---GSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRNDDDEFLLPKRPTPQKATPQKSALDTSRV---EEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIKSLGAVLNRLLGESTNQIV---LESISSFVKTHHPRLSDWLKLGLGKLFAKKGAEMTLNSKKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWAYKVLQSH-GHDQHVPQQDAVSEEACVRATISTT 709 HSP 2 Score: 64.3142 bits (155), Expect = 7.530e-10 Identity = 55/223 (24.66%), Postives = 103/223 (46.19%), Query Frame = 3
Query: 2922 NDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKA-AEECSRVLTSTMP--RKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWS--LLKLNNSQARLLEVYIKKGGS 3575
D ++ L + M E + T W+++F LL + + + +E D A LRVL ++ SQA R + T++ I KVL+A + + + A++C + L + +P + V + LI E + L LKM+ +L + + + V++L + + S VRK +V C+V + +G L L++ + L++VY+ + S
Sbjct: 800 GDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVA--------LRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLILNEEKAQEPKASL-VLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMS 1013
BLAST of CLIP-associating protein 1 vs. Ensembl Celegans
Match: cls-2 (pep chromosome:WBcel235:III:9055052:9058882:1 gene:WBGene00000549.1 transcript:R107.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cls-2) HSP 1 Score: 160.229 bits (404), Expect = 2.063e-39 Identity = 170/696 (24.43%), Postives = 303/696 (43.53%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLH--ADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLD--LEIKNC----VSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS---ADVFKVPITNAVKTTVKSVTSKPSNFTGR-----------TRVNSAKSENPSANSSTEYLYSK-QQSNFGWRAAKPKT-ATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVA-----EGLKKSRRNSHDHY------QSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDL-RKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPT 2186
+EISS + +E L L +DW R++ L+ +R ++ +D + + L + + +C V DLRSQ++REA IT FL K + E+ + S V+ K+M+T G V +IV + +I + ++ RQ C+ LL+++ E+WN K I E IK I DAD +TR R+AF + +KL S+D +KQK L+ + I+S F+ ++ +++ + S F + TR+ ++ S P+ T SK S G + A+P A +S+ R R V SQP +R+ SP + T + A + +N S + SSL ++A + Q A E L++ RN D + T + S++ + ++ EV+ +S + N+++ G+ ++E +L E K+L + N + E+ ++ L + +FV +H L DWL + KL + E +SK +I ++ ++ ++ + C+ V D + + K R+ LLEY+ +L N ++ + + W A+ ++ L ++ LF LN + FS L ++D A +L ++ Q V + S+ R T+ T
Sbjct: 31 MEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHG----EDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCA-LLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKMLRASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRAR-GSVPTSQPGSRNGSPP-RRPSATEAFPAEMQRVKSNL---GSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRNDDDEFLLPKRPTPQKATPQKSALDTSRV---EEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIKSLGAVLNRLLGESTNQIV---LESISSFVKTHHPRLSDWLKLGLGKLFAKKGAEMTLNSKKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWAYKVLQSH-GHDQHVPQQDAVSEEACVRATISTT 709 HSP 2 Score: 64.3142 bits (155), Expect = 7.530e-10 Identity = 55/223 (24.66%), Postives = 103/223 (46.19%), Query Frame = 3
Query: 2922 NDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKA-AEECSRVLTSTMP--RKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWS--LLKLNNSQARLLEVYIKKGGS 3575
D ++ L + M E + T W+++F LL + + + +E D A LRVL ++ SQA R + T++ I KVL+A + + + A++C + L + +P + V + LI E + L LKM+ +L + + + V++L + + S VRK +V C+V + +G L L++ + L++VY+ + S
Sbjct: 800 GDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVA--------LRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLILNEEKAQEPKASL-VLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMS 1013
BLAST of CLIP-associating protein 1 vs. Ensembl Celegans
Match: cls-3 (pep chromosome:WBcel235:III:9186556:9191127:-1 gene:WBGene00013847.1 transcript:ZC84.3.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cls-3) HSP 1 Score: 131.724 bits (330), Expect = 1.357e-30 Identity = 144/627 (22.97%), Postives = 265/627 (42.26%), Query Frame = 3
Query: 270 ADDWQHRVDNLRILRGII----KANRFPT--DDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----ADVFKVPITNAVKTTVKS----------------VTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSD-PRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNN--FQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCIL-QLSQPSLLDTNNPDLGPMLGNILVWTAETK-STDLRKISSNIVIKLFDLNASQFSRLL 2054
++DW R L+ +R ++ K PT +Q + +L +K DLRSQV+REA IT +F+ + + E I+ M+ V+ KIM+TS ++IV + ++ + ++ + RQ + LL+++ W+ + ++ I E IK I+DAD +TRA R AF + + + L LD +KQK L+ GD S ++ +PI + + K+ + K + F G +R+ S A T K SNF K +A+I + P R + S + +RD SP+ ++ + + KY N F K P+T + ++ LK +HD ++V+ S + +++K G+ K + + SL P+E K + + N + + ++ L + FV + L +WL + KL +A E + ++K +I LN++++ + + C+ + D + K R+ LLEY+ +L + ++P N +L + +L W ++ + S L + +F +N + FS L+
Sbjct: 52 SEDWNKRQTQLKTVRSLVIHGEKVVDRPTMIAHLVQLLGCFELAVK----DLRSQVLREAAITCSFIVSKYGIETHSIGEDILVPAMSQVAVSTKIMATSASTLTEFIVEYVQTRQVFTILSSFSTSKDKSQRRQLAA-LLEIVISKWSDRIKKQIMRQICELIKSAINDADSETRAAGRRAFAKLDEMHSEEADALYLELDHSKQKMLRG------GDAASSWASVNSEKGSIPIRSKLSAGSKAHMNISAKFLAQRSASAIDPKATKFAGPSRLVRPTSTKTMARQDTSPAGCKY-SNFISMFFKTLLLSAKIPYPNRPGSRTRTSSITSTDSRDTSPTRRNSPLPPETQKARVKYGNGSFFAKLGMPDTTDDDEF--LLPIRIRSPLKTPTIEAHDK--------------------VSQVLKECCSSSVSEKKEGIKKLLPIVADTSLNPIEIKNIGNCLNRLLSDASNTMV---LEIYSIFVRTHSSRLSEWLRLALAKLFARKAAETLPNTKKQIGHTLNVILECFNAHHQLVTVCELMCDPIHLMVPKARVVLLEYLTSLLDEYTEPG-ASINAKELKTAIRKMLTWASDPRLSILLTPHVEKAICSMFCVNVADFSALI 640 HSP 2 Score: 56.225 bits (134), Expect = 1.831e-7 Identity = 51/244 (20.90%), Postives = 117/244 (47.95%), Query Frame = 3
Query: 2871 LPPEDM-----MSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDP-EKSVIKAAEECSRVLTSTMPRKVCLKMLIDVIS-DGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWS--LLKLNNSQARLLEVYIKKGGS 3575
LPP+ + + ++L+++ + ++ +E+++ + + M + W++ + LL L E + + ENN + LR+L ++ +QA + + T++ + KVL+A + + + A E+C R L + +P + + +++ + +++ LKM+ +L + E + V+++ + S VRK V C+V + +GE + KL + L++VY+ + S
Sbjct: 743 LPPDTLEKIQNVQDLLQKMRS-SENADEQESAISSIYMMICDGGFGVWEQCYAKLLLNLFEILSKSRS--ENN------KKMCLRILGKMCTAQAAKLFDSTEMAVCKVLDAAVNTNDATTALAVEDCLRTLATHLPLSNIINIAKVILNQEPIDDERASLVLKMVTRLFEELPAEELNNIVDDITPTIIKAYQSTSSTVRKTVVYCLVAMVNRVGEQRMTPHFTKLPKAMTNLIQVYVNRAIS 977
BLAST of CLIP-associating protein 1 vs. Ensembl Fly
Match: chb (gene:FBgn0021760 transcript:FBtr0089460) HSP 1 Score: 158.303 bits (399), Expect = 1.665e-38 Identity = 122/400 (30.50%), Postives = 191/400 (47.75%), Query Frame = 3
Query: 276 DWQHRVDNLRILRGIIKANRFPTDDFLQ-NIKFLDLEIKNCV-SDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRT-------RVNSAKSENPSANSSTEY-LYSKQQSNFGW-------------------------RAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCK-----SGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKK 1355
DW+ RVD L+ +R ++ + F+ +K L L + + +LRSQV+REACIT+A++SK ++NKLD F I+E L+NL+ N K+++++ +ALKYI+ T++ ++L + T++ SKS +R EL+ L+ E W K LE++++ + + +KK I DAD R SR A+ F FP+L +++ +LD Q+AL++E + + TV + P T V++A ++ A +Y LYS+Q+ G P T + T PRGR VSQSQP +R SPS K G Y GA T KKAS S+ ++ T+ GL K
Sbjct: 333 DWEKRVDALKKIRALLILSYHTQPQFVAVQLKELSLSFVDILKEELRSQVIREACITIAYMSKTLRNKLDAFCWSILEHLINLIQNSAKVIASASTIALKYIIKYTHAPKLLKIYTDTLNQSKSKDIRSTLCELMVLLFEEWQTKALERNATVLRDTLKKSIGDADCDARRHSRYAYWAFRRHFPELADQIYGTLDIAAQRALERE----REGGGGGGTGTGTGTAPETRRTVSRIGRTPGTLQKPTPSMRSISAVDTAAAQR--AKVRAQYTLYSRQRKPLGPNNSNQASMTGAAASGSLPRPRLNSNSGGTPATTPGSV-TPRPRGR-AGVSQSQPGSRSTSPSTKLRDQYGGIGNYYRGA-----TGAIPKKASGIPRSTASSRETSPTRSGGGLMK 719 HSP 2 Score: 89.7373 bits (221), Expect = 1.816e-17 Identity = 101/445 (22.70%), Postives = 187/445 (42.02%), Query Frame = 3
Query: 960 TTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYIT----YSNGASDYKYTNNFQKKASPNTYSSL--RYKDAFET---------------QVAEGLKKSRRNSHDHYQSDDNTSETSSVISD----------------------------QLPSFNEVVVLLN---SKTWNDRKRGLNKAEKYITEA-SLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPD-----LGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQ 2120
TT SVT +P GR V+ ++ + S + ST K + +G + AT I P+ + + +S S+R+ SP+ G + YS GA + T P+ + L + ++A T + G + R +SDD SE SSV S+ Q F+++ ++ S W++RK GL +Y+ + L + K ++D+F MF++ T V FL + + + + LH+WL+ L+ +L + + S +I K L ++ + + T + + ++D T PT K R+ +L ++ L+ ++ P + + A+ KS +LR + + ++ L++LN Q + LL LP +QD A S +++++ Q
Sbjct: 642 TTPGSVTPRPR---GRAGVSQSQPGSRSTSPST-----KLRDQYGGIGNYYRGATGAI----PK-KASGIPRSTASSRETSPTRSGGGLMKRSMYSTGAGSRR-TPERNNPVRPSAAARLLAQSREAEHTLGVGDDGQPDYVSGDYMRSGGMRMGRKLMGRDESDDIDSEASSVCSERSFDSSYTRGNKSNYSLSGSHTRLDWSTQRAPFDDIETIIQFCASTHWSERKDGLISLTQYLADGKELTQQQLKCVLDMFRKMFMDTHTKVYSLFLDTVTELILVHANELHEWLFILLTRLFNKLGTDLLNSMHSKIWKTLQVVHEYFPTQLQLKELFRIISDSTQTPTTKTRIAILRFLT---DLANTYCKSSDFPSDQSQACERTVLKLAQLAADQKSMELRSQARSCLVALYNLNTPQMTLLLADLPKVYQDSARSCIHSHMRRQ 1069 HSP 3 Score: 61.2326 bits (147), Expect = 7.386e-9 Identity = 50/194 (25.77%), Postives = 108/194 (55.67%), Query Frame = 3
Query: 3000 DEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPR--FLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGT-ENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW--SLLKLNNSQARLLEVYIKK 3566
++HF++++ +LL N ++ E+ +++ L VL ++ +S R ++ + +L +LK+++ ++ ++++ R+ S +P + + ++ VI+ G LC A+K+L+++ ++ E +A ++ + L+ + +S VRK +V C+V+L+ V+GE L LN S+ RLL VYI+K
Sbjct: 1289 NKHFRSIMRMLL-----NILEAEH----TDVVIAGLHVLSKIMRSNKMRHNWMHFLELILLKIIQCYQHSKEALRDIDSMIPRIAPS-LPLDLSINIVNPVIATGEFPTNLC--AIKILLEVTEHHGSEITDAHLDIVFPNLARSADDTQSMVRKAAVFCIVKLYFVLGEEKVKPKLSVLNPSKVRLLNVYIEK 1470
BLAST of CLIP-associating protein 1 vs. Ensembl Fly
Match: chb (gene:FBgn0021760 transcript:FBtr0089461) HSP 1 Score: 158.303 bits (399), Expect = 1.665e-38 Identity = 122/400 (30.50%), Postives = 191/400 (47.75%), Query Frame = 3
Query: 276 DWQHRVDNLRILRGIIKANRFPTDDFLQ-NIKFLDLEIKNCV-SDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRT-------RVNSAKSENPSANSSTEY-LYSKQQSNFGW-------------------------RAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCK-----SGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKK 1355
DW+ RVD L+ +R ++ + F+ +K L L + + +LRSQV+REACIT+A++SK ++NKLD F I+E L+NL+ N K+++++ +ALKYI+ T++ ++L + T++ SKS +R EL+ L+ E W K LE++++ + + +KK I DAD R SR A+ F FP+L +++ +LD Q+AL++E + + TV + P T V++A ++ A +Y LYS+Q+ G P T + T PRGR VSQSQP +R SPS K G Y GA T KKAS S+ ++ T+ GL K
Sbjct: 333 DWEKRVDALKKIRALLILSYHTQPQFVAVQLKELSLSFVDILKEELRSQVIREACITIAYMSKTLRNKLDAFCWSILEHLINLIQNSAKVIASASTIALKYIIKYTHAPKLLKIYTDTLNQSKSKDIRSTLCELMVLLFEEWQTKALERNATVLRDTLKKSIGDADCDARRHSRYAYWAFRRHFPELADQIYGTLDIAAQRALERE----REGGGGGGTGTGTGTAPETRRTVSRIGRTPGTLQKPTPSMRSISAVDTAAAQR--AKVRAQYTLYSRQRKPLGPNNSNQASMTGAAASGSLPRPRLNSNSGGTPATTPGSV-TPRPRGR-AGVSQSQPGSRSTSPSTKLRDQYGGIGNYYRGA-----TGAIPKKASGIPRSTASSRETSPTRSGGGLMK 719 HSP 2 Score: 89.7373 bits (221), Expect = 1.816e-17 Identity = 101/445 (22.70%), Postives = 187/445 (42.02%), Query Frame = 3
Query: 960 TTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYIT----YSNGASDYKYTNNFQKKASPNTYSSL--RYKDAFET---------------QVAEGLKKSRRNSHDHYQSDDNTSETSSVISD----------------------------QLPSFNEVVVLLN---SKTWNDRKRGLNKAEKYITEA-SLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPD-----LGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQ 2120
TT SVT +P GR V+ ++ + S + ST K + +G + AT I P+ + + +S S+R+ SP+ G + YS GA + T P+ + L + ++A T + G + R +SDD SE SSV S+ Q F+++ ++ S W++RK GL +Y+ + L + K ++D+F MF++ T V FL + + + + LH+WL+ L+ +L + + S +I K L ++ + + T + + ++D T PT K R+ +L ++ L+ ++ P + + A+ KS +LR + + ++ L++LN Q + LL LP +QD A S +++++ Q
Sbjct: 642 TTPGSVTPRPR---GRAGVSQSQPGSRSTSPST-----KLRDQYGGIGNYYRGATGAI----PK-KASGIPRSTASSRETSPTRSGGGLMKRSMYSTGAGSRR-TPERNNPVRPSAAARLLAQSREAEHTLGVGDDGQPDYVSGDYMRSGGMRMGRKLMGRDESDDIDSEASSVCSERSFDSSYTRGNKSNYSLSGSHTRLDWSTQRAPFDDIETIIQFCASTHWSERKDGLISLTQYLADGKELTQQQLKCVLDMFRKMFMDTHTKVYSLFLDTVTELILVHANELHEWLFILLTRLFNKLGTDLLNSMHSKIWKTLQVVHEYFPTQLQLKELFRIISDSTQTPTTKTRIAILRFLT---DLANTYCKSSDFPSDQSQACERTVLKLAQLAADQKSMELRSQARSCLVALYNLNTPQMTLLLADLPKVYQDSARSCIHSHMRRQ 1069 HSP 3 Score: 61.2326 bits (147), Expect = 7.386e-9 Identity = 50/194 (25.77%), Postives = 108/194 (55.67%), Query Frame = 3
Query: 3000 DEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPR--FLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGT-ENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW--SLLKLNNSQARLLEVYIKK 3566
++HF++++ +LL N ++ E+ +++ L VL ++ +S R ++ + +L +LK+++ ++ ++++ R+ S +P + + ++ VI+ G LC A+K+L+++ ++ E +A ++ + L+ + +S VRK +V C+V+L+ V+GE L LN S+ RLL VYI+K
Sbjct: 1289 NKHFRSIMRMLL-----NILEAEH----TDVVIAGLHVLSKIMRSNKMRHNWMHFLELILLKIIQCYQHSKEALRDIDSMIPRIAPS-LPLDLSINIVNPVIATGEFPTNLC--AIKILLEVTEHHGSEITDAHLDIVFPNLARSADDTQSMVRKAAVFCIVKLYFVLGEEKVKPKLSVLNPSKVRLLNVYIEK 1470
BLAST of CLIP-associating protein 1 vs. Ensembl Fly
Match: chb (gene:FBgn0021760 transcript:FBtr0089462) HSP 1 Score: 158.303 bits (399), Expect = 1.665e-38 Identity = 122/400 (30.50%), Postives = 191/400 (47.75%), Query Frame = 3
Query: 276 DWQHRVDNLRILRGIIKANRFPTDDFLQ-NIKFLDLEIKNCV-SDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRT-------RVNSAKSENPSANSSTEY-LYSKQQSNFGW-------------------------RAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCK-----SGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKK 1355
DW+ RVD L+ +R ++ + F+ +K L L + + +LRSQV+REACIT+A++SK ++NKLD F I+E L+NL+ N K+++++ +ALKYI+ T++ ++L + T++ SKS +R EL+ L+ E W K LE++++ + + +KK I DAD R SR A+ F FP+L +++ +LD Q+AL++E + + TV + P T V++A ++ A +Y LYS+Q+ G P T + T PRGR VSQSQP +R SPS K G Y GA T KKAS S+ ++ T+ GL K
Sbjct: 333 DWEKRVDALKKIRALLILSYHTQPQFVAVQLKELSLSFVDILKEELRSQVIREACITIAYMSKTLRNKLDAFCWSILEHLINLIQNSAKVIASASTIALKYIIKYTHAPKLLKIYTDTLNQSKSKDIRSTLCELMVLLFEEWQTKALERNATVLRDTLKKSIGDADCDARRHSRYAYWAFRRHFPELADQIYGTLDIAAQRALERE----REGGGGGGTGTGTGTAPETRRTVSRIGRTPGTLQKPTPSMRSISAVDTAAAQR--AKVRAQYTLYSRQRKPLGPNNSNQASMTGAAASGSLPRPRLNSNSGGTPATTPGSV-TPRPRGR-AGVSQSQPGSRSTSPSTKLRDQYGGIGNYYRGA-----TGAIPKKASGIPRSTASSRETSPTRSGGGLMK 719 HSP 2 Score: 89.7373 bits (221), Expect = 1.816e-17 Identity = 101/445 (22.70%), Postives = 187/445 (42.02%), Query Frame = 3
Query: 960 TTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYIT----YSNGASDYKYTNNFQKKASPNTYSSL--RYKDAFET---------------QVAEGLKKSRRNSHDHYQSDDNTSETSSVISD----------------------------QLPSFNEVVVLLN---SKTWNDRKRGLNKAEKYITEA-SLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPD-----LGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQ 2120
TT SVT +P GR V+ ++ + S + ST K + +G + AT I P+ + + +S S+R+ SP+ G + YS GA + T P+ + L + ++A T + G + R +SDD SE SSV S+ Q F+++ ++ S W++RK GL +Y+ + L + K ++D+F MF++ T V FL + + + + LH+WL+ L+ +L + + S +I K L ++ + + T + + ++D T PT K R+ +L ++ L+ ++ P + + A+ KS +LR + + ++ L++LN Q + LL LP +QD A S +++++ Q
Sbjct: 642 TTPGSVTPRPR---GRAGVSQSQPGSRSTSPST-----KLRDQYGGIGNYYRGATGAI----PK-KASGIPRSTASSRETSPTRSGGGLMKRSMYSTGAGSRR-TPERNNPVRPSAAARLLAQSREAEHTLGVGDDGQPDYVSGDYMRSGGMRMGRKLMGRDESDDIDSEASSVCSERSFDSSYTRGNKSNYSLSGSHTRLDWSTQRAPFDDIETIIQFCASTHWSERKDGLISLTQYLADGKELTQQQLKCVLDMFRKMFMDTHTKVYSLFLDTVTELILVHANELHEWLFILLTRLFNKLGTDLLNSMHSKIWKTLQVVHEYFPTQLQLKELFRIISDSTQTPTTKTRIAILRFLT---DLANTYCKSSDFPSDQSQACERTVLKLAQLAADQKSMELRSQARSCLVALYNLNTPQMTLLLADLPKVYQDSARSCIHSHMRRQ 1069 HSP 3 Score: 61.2326 bits (147), Expect = 7.386e-9 Identity = 50/194 (25.77%), Postives = 108/194 (55.67%), Query Frame = 3
Query: 3000 DEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPR--FLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGT-ENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW--SLLKLNNSQARLLEVYIKK 3566
++HF++++ +LL N ++ E+ +++ L VL ++ +S R ++ + +L +LK+++ ++ ++++ R+ S +P + + ++ VI+ G LC A+K+L+++ ++ E +A ++ + L+ + +S VRK +V C+V+L+ V+GE L LN S+ RLL VYI+K
Sbjct: 1289 NKHFRSIMRMLL-----NILEAEH----TDVVIAGLHVLSKIMRSNKMRHNWMHFLELILLKIIQCYQHSKEALRDIDSMIPRIAPS-LPLDLSINIVNPVIATGEFPTNLC--AIKILLEVTEHHGSEITDAHLDIVFPNLARSADDTQSMVRKAAVFCIVKLYFVLGEEKVKPKLSVLNPSKVRLLNVYIEK 1470
BLAST of CLIP-associating protein 1 vs. Ensembl Zebrafish
Match: clasp1a (cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]) HSP 1 Score: 174.096 bits (440), Expect = 3.282e-43 Identity = 126/385 (32.73%), Postives = 196/385 (50.91%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKT----------TVKSVTSKP----------------------------SNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFG----WRAAKPKTATARIDTSDPRG--RIQKVSQSQPSTRDPSPSCKSGY 1223
++I S KEL +SL I L D DW+HRV L+ +R ++ A + F+Q ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N K+M+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKGI DAD + R+ +R+ + F+G F + E L Q+L+ T QKALQ L S S + +P ++ + +VK+V P + + ++R+++A S PS S+ L ++ G R + +A +D RG R + VSQSQP +R SP G+
Sbjct: 309 VQIYSSKELEDSLNKIREILSDDKQDWEHRVTALKKMRSLLMAGATEHEGFIQQLRLLEGAFKMSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNSAKVMATSGVAAIRLILRHTHFPRLIP-IITSNCTSKSVAVRRRCYEFLDLLLQEWQTHTLERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHFSREAEHLFQALESTYQKALQSHLKS-------SDSIVSLPQSDRSSSSSQESLNRPLSVKTVIGGPVTRSKVIGSRVSSSSGSLQRSRSDIDVNAASSAKSRMSTATS--PSPFSAAAALPPGSYASLGRVRTRRQSSGSAVSANSTVTDSRGRSRAKVVSQSQPGSRSSSPGKLLGH 683 HSP 2 Score: 168.318 bits (425), Expect = 1.903e-41 Identity = 95/230 (41.30%), Postives = 147/230 (63.91%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
D+++++LKELSNHN+R EERK L L+K+ RE++ WDEHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L ++ + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1256 DLVADLLKELSNHNERVEERKGALIELLKITREDSLAVWDEHFKTILLLLLETLGDKD---------HTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTA-DYPINLAAIKMQTKVVERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRA 1475 HSP 3 Score: 141.354 bits (355), Expect = 3.386e-33 Identity = 97/329 (29.48%), Postives = 169/329 (51.37%), Query Frame = 3
Query: 1176 SQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNT-SETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
S+ S+RD SP+ G+ + + + AS N L E VA+ L+K R Y+SDD+ S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + + V FL L FV + + L DWL+ L+ +LL + + S + ++QK L++ +++ F + +F+ D+T P +K+++ +L+Y++ + + P N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 744 SRESSRDTSPA--RGFTPLDR----FGLIHQARISASVNAMRVLNTGTEVEAAVADALRKPLRR---RYESDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPGDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1062
BLAST of CLIP-associating protein 1 vs. Ensembl Zebrafish
Match: clasp2 (cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:404604]) HSP 1 Score: 171.785 bits (434), Expect = 1.313e-42 Identity = 133/408 (32.60%), Postives = 204/408 (50.00%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKP----SNFTGRTRVNSAKSENPS------------ANSSTEYLYSKQQSNFG----------------WRAAKPKTATARIDTS--DPRGRIQK--VSQSQPSTRDPSPS---CKSGYITYSNGA 1244
K+ GAV EEDF + F P ++I S ++L ++L I L D DW HR + L+ +R ++ A D F Q+++ LD K DLRSQVVREACITVA+LS + NK D+ E I+ L NL+ N K+M+TSG A++ I+ +T+ R++P + + TSKS ++R+ C E L L+ + W LE+ ++ + E+IKKGI DAD + R ++R+A+ FP E L SL+ + Q+ LQ L S S V +P ++ ++ + ++P S GR S S +P+ A + + +S Q G R + + + + +S D RGR + SQSQP +R SP + T S GA
Sbjct: 53 KEGAGAVDEEDFIKAFTDVPTVQIYSTRDLEDNLNKIREVLSDDKHDWDHRANALKKIRSLLVAGATDYDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSTLLGNKFDHGAEGIVPVLFNLIPNCAKVMATSGTAAIRIIIRHTHVPRLIP-LIASNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHAAVLVESIKKGIRDADAEARVEARKAYWGLRAHFPGEAESLYNSLESSYQRTLQSCLKS-------SGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPAGSKSSGSPASLQRSRSDVDVNAAAGAKARHSGQAGGAGRVTTGLTPGSYASLGRLRTKQTLSTASSVGSSQVDSRGRTRSKMASQSQPGSRSGSPGRVLASTALSTLSTGA 452 HSP 2 Score: 166.007 bits (419), Expect = 9.256e-41 Identity = 97/230 (42.17%), Postives = 144/230 (62.61%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
++++E+LKELSNH++R EERKA L L+++ RE WDEHFKT+L LLLET+GD E IRA +LRVL+E+ Q RF Y +LTI+K LEAHKDP K V++AAEE + +L +++ C+K+L +I + + L A+KML K+I +E + + + L ++ ES VRK V C+V ++ VIGE + L +L+ S+ +LL +YIK+
Sbjct: 1013 EVVAELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGDGE---------HVIRALALRVLKEILNRQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEEAASMLATSISPDQCIKVLCPIIQSA-DYPINLAAIKMLTKVIDRLPKEGLIQMLPEIVPGLIQGYDNSESSVRKACVFCLVAIYAVIGEDLKPHLSQLSGSKLKLLNLYIKRA 1232 HSP 3 Score: 145.976 bits (367), Expect = 1.428e-34 Identity = 122/456 (26.75%), Postives = 203/456 (44.52%), Query Frame = 3
Query: 960 TTVKSVTSKPSNFTGRTRVNSAKSENPSANSST--EYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPS----CKSGYI---TYSNGAS---------DYKYTNNFQKKASPN---TYSSLRYKDAF-------------------------------ETQVAEGLKKSRRNSHD---HYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCI-LQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
+T SV S + GRTR A P + S + L S S T R+ + R ++ +SQ +RD SP+ + I + S G S D +F AS + + +L DAF E +A+ LKK R +D Y DD S+ SS S++ +P++ +V +LN S W++RK GL + + +L +E K L +IF MF + + V FL L F+ + + L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P +K+++ +L+Y++ + LQ+ ++T L + I+ WT E KS+D+RK + +++I LF LN +F+ LL LP TFQD AT +L +L
Sbjct: 403 STASSVGSSQVDSRGRTRSKMASQSQPGSRSGSPGRVLASTALSTL-------STGAQRVSAAPGSHRRSRIPRSQGCSRDSSPTRLSVARGSRIPRPSVSQGCSREASRESSRDTSPVRSFTPLASRHYSRSTGALHAPDAFGAAGSGLGMSQSSRLSSSVSAMRVLNTGSDVEEALADALKKPARRRYDTYGMYSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASANWSERKEGLMGLQALLKNHRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFIAVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEPQDFVNTGETRLA--VSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLGALPKTFQDGATKLLQNHL 849
BLAST of CLIP-associating protein 1 vs. Ensembl Zebrafish
Match: clasp2 (cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:404604]) HSP 1 Score: 171.4 bits (433), Expect = 2.546e-42 Identity = 133/408 (32.60%), Postives = 204/408 (50.00%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKP----SNFTGRTRVNSAKSENPS------------ANSSTEYLYSKQQSNFG----------------WRAAKPKTATARIDTS--DPRGRIQK--VSQSQPSTRDPSPS---CKSGYITYSNGA 1244
K+ GAV EEDF + F P ++I S ++L ++L I L D DW HR + L+ +R ++ A D F Q+++ LD K DLRSQVVREACITVA+LS + NK D+ E I+ L NL+ N K+M+TSG A++ I+ +T+ R++P + + TSKS ++R+ C E L L+ + W LE+ ++ + E+IKKGI DAD + R ++R+A+ FP E L SL+ + Q+ LQ L S S V +P ++ ++ + ++P S GR S S +P+ A + + +S Q G R + + + + +S D RGR + SQSQP +R SP + T S GA
Sbjct: 292 KEGAGAVDEEDFIKAFTDVPTVQIYSTRDLEDNLNKIREVLSDDKHDWDHRANALKKIRSLLVAGATDYDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSTLLGNKFDHGAEGIVPVLFNLIPNCAKVMATSGTAAIRIIIRHTHVPRLIP-LIASNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHAAVLVESIKKGIRDADAEARVEARKAYWGLRAHFPGEAESLYNSLESSYQRTLQSCLKS-------SGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPAGSKSSGSPASLQRSRSDVDVNAAAGAKARHSGQAGGAGRVTTGLTPGSYASLGRLRTKQTLSTASSVGSSQVDSRGRTRSKMASQSQPGSRSGSPGRVLASTALSTLSTGA 691 HSP 2 Score: 165.236 bits (417), Expect = 1.648e-40 Identity = 97/230 (42.17%), Postives = 144/230 (62.61%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
++++E+LKELSNH++R EERKA L L+++ RE WDEHFKT+L LLLET+GD E IRA +LRVL+E+ Q RF Y +LTI+K LEAHKDP K V++AAEE + +L +++ C+K+L +I + + L A+KML K+I +E + + + L ++ ES VRK V C+V ++ VIGE + L +L+ S+ +LL +YIK+
Sbjct: 1239 EVVAELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGDGE---------HVIRALALRVLKEILNRQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEEAASMLATSISPDQCIKVLCPIIQSA-DYPINLAAIKMLTKVIDRLPKEGLIQMLPEIVPGLIQGYDNSESSVRKACVFCLVAIYAVIGEDLKPHLSQLSGSKLKLLNLYIKRA 1458 HSP 3 Score: 140.198 bits (352), Expect = 9.539e-33 Identity = 81/270 (30.00%), Postives = 146/270 (54.07%), Query Frame = 3
Query: 1353 KSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCI-LQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
+ R +++ Y DD S+ SS S++ +P++ +V +LN S W++RK GL + + +L +E K L +IF MF + + V FL L F+ + + L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P +K+++ +L+Y++ + LQ+ ++T L + I+ WT E KS+D+RK + +++I LF LN +F+ LL LP TFQD AT +L +L
Sbjct: 808 RRRYDTYGMYSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASANWSERKEGLMGLQALLKNHRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFIAVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEPQDFVNTGETRLA--VSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLGALPKTFQDGATKLLQNHL 1075
BLAST of CLIP-associating protein 1 vs. Ensembl Zebrafish
Match: clasp1a (cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]) HSP 1 Score: 171.014 bits (432), Expect = 2.863e-42 Identity = 96/232 (41.38%), Postives = 143/232 (61.64%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLS 896
++I S KEL +SL I L D DW+HRV L+ +R ++ A + F+Q ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N K+M+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKGI DAD + R+ +R+ + F+G F + E L Q+L+ T QKALQ L S
Sbjct: 311 VQIYSSKELEDSLNKIREILSDDKQDWEHRVTALKKMRSLLMAGATEHEGFIQQLRLLEGAFKMSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNSAKVMATSGVAAIRLILRHTHFPRLIP-IITSNCTSKSVAVRRRCYEFLDLLLQEWQTHTLERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHFSREAEHLFQALESTYQKALQSHLKS 541 HSP 2 Score: 168.318 bits (425), Expect = 2.321e-41 Identity = 95/230 (41.30%), Postives = 147/230 (63.91%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
D+++++LKELSNHN+R EERK L L+K+ RE++ WDEHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L ++ + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1299 DLVADLLKELSNHNERVEERKGALIELLKITREDSLAVWDEHFKTILLLLLETLGDKD---------HTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTA-DYPINLAAIKMQTKVVERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRA 1518 HSP 3 Score: 136.732 bits (343), Expect = 1.147e-31 Identity = 97/330 (29.39%), Postives = 169/330 (51.21%), Query Frame = 3
Query: 1176 SQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNT-SETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
S+ S+RD SP+ G+ + + + AS N L E VA+ L+K R Y+SDD+ S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + + V FL L FV + + L DWL+ L+ +LL + + S + ++QK L++ +++ F + +F+ D+T P +K+++ +L+Y++ + + P N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 752 SRESSRDTSPA--RGFTPLDR----FGLIHQARISASVNAMRVLNTGTEVEAAVADALRKPLRR---RYESDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPGDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1071
BLAST of CLIP-associating protein 1 vs. Ensembl Zebrafish
Match: clasp2 (cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:404604]) HSP 1 Score: 167.548 bits (423), Expect = 3.239e-41 Identity = 111/307 (36.16%), Postives = 172/307 (56.03%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKP----SNFTGRTRVNSAKSENPSA 1046
K+ GAV EEDF + F P ++I S ++L ++L I L D DW HR + L+ +R ++ A D F Q+++ LD K DLRSQVVREACITVA+LS + NK D+ E I+ L NL+ N K+M+TSG A++ I+ +T+ R++P + + TSKS ++R+ C E L L+ + W LE+ ++ + E+IKKGI DAD + R ++R+A+ FP E L SL+ + Q+ LQ L S S V +P ++ ++ + ++P S GR S S +P++
Sbjct: 60 KEGAGAVDEEDFIKAFTDVPTVQIYSTRDLEDNLNKIREVLSDDKHDWDHRANALKKIRSLLVAGATDYDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSTLLGNKFDHGAEGIVPVLFNLIPNCAKVMATSGTAAIRIIIRHTHVPRLIP-LIASNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHAAVLVESIKKGIRDADAEARVEARKAYWGLRAHFPGEAESLYNSLESSYQRTLQSCLKS-------SGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPAGSKSSGSPAS 358 HSP 2 Score: 166.007 bits (419), Expect = 8.352e-41 Identity = 97/230 (42.17%), Postives = 144/230 (62.61%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
++++E+LKELSNH++R EERKA L L+++ RE WDEHFKT+L LLLET+GD E IRA +LRVL+E+ Q RF Y +LTI+K LEAHKDP K V++AAEE + +L +++ C+K+L +I + + L A+KML K+I +E + + + L ++ ES VRK V C+V ++ VIGE + L +L+ S+ +LL +YIK+
Sbjct: 1051 EVVAELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGDGE---------HVIRALALRVLKEILNRQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEEAASMLATSISPDQCIKVLCPIIQSA-DYPINLAAIKMLTKVIDRLPKEGLIQMLPEIVPGLIQGYDNSESSVRKACVFCLVAIYAVIGEDLKPHLSQLSGSKLKLLNLYIKRA 1270 HSP 3 Score: 133.265 bits (334), Expect = 9.780e-31 Identity = 87/302 (28.81%), Postives = 151/302 (50.00%), Query Frame = 3
Query: 1326 ETQVAEGLKKSRRNSHD---HYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT--------------------VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCI-LQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
E +A+ LKK R +D Y DD S+ SS S++ +P++ +V +LN S W++RK GL + + +L +E K L +IF MF + + V FL L F+ + + L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P +K+++ +L+Y++ + LQ+ ++T L + I+ WT E KS+D+RK + +++I LF LN +F+ LL LP TFQD AT +L +L
Sbjct: 588 EEALADALKKPARRRYDTYGMYSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASANWSERKEGLMGLQALLKNHRTLSRVELKRLCEIFTRMFADPHSKRDPRGFGTVESGISSASFKRVFSMFLETLVDFIAVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEPQDFVNTGETRLA--VSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLGALPKTFQDGATKLLQNHL 887
BLAST of CLIP-associating protein 1 vs. Ensembl Xenopus
Match: TOGARAM2 (TOG array regulator of axonemal microtubules 2 [Source:NCBI gene;Acc:100495375]) HSP 1 Score: 55.0694 bits (131), Expect = 1.139e-6 Identity = 45/221 (20.36%), Postives = 98/221 (44.34%), Query Frame = 3
Query: 213 ISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGI----SDADEQTRAQSREAFCWFNG--KFPKLGEKLLQSLD 857
I + + ++ +L++ DW+H+ L +R + + D + + + ++LRS+V R A T+ L K +K +D +E+I L++ + + + + +L +V N + + LP ++ + +++S+R+ ++ L + E + L + + + + + D + TR R FC G KF E+L+ S D
Sbjct: 480 IGPMSHPEQGMIEALRQLNSKDWEHKEKGLGSVRCLSACH---PDVLYSRLHDVSTAVTREANNLRSKVSRHAIRTLGDLFKHLKRAMDPEVEEISRVLLHKIGDTNEFIREESDKSLGSMVENASPSKALPALISGGISHRNSSVRKCTAKYLLSVIEQLGAERLLSGTRESTDVLLRTVVRLNQDGQQDTRFYGRRMFCLLMGNPKFESQMERLIPSHD 697
BLAST of CLIP-associating protein 1 vs. Ensembl Mouse
Match: Clasp1 (CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]) HSP 1 Score: 280.026 bits (715), Expect = 4.485e-76 Identity = 233/755 (30.86%), Postives = 376/755 (49.80%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPI------TNAVKTTVKSVTSKPSNFTG---RTR----VNSAKSEN-------------------PSANSSTEYLYSKQQSNFGWR--AAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSP---------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGLKKSRRNSHD---HYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L + D I S + P+ T + + +V++K + TG R+R VN+A S P + +S + +++QS+ A+ P + R R + VSQSQP +R SP S K I S G S N Q P + +++R E VA+ LKK R ++ Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKN--SDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSPAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTPSDSRGR-------SRAKVVSQSQPGSRSSSPGKLLGSGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1034 HSP 2 Score: 167.548 bits (423), Expect = 3.910e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1195 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1435
BLAST of CLIP-associating protein 1 vs. Ensembl Mouse
Match: Clasp1 (CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]) HSP 1 Score: 279.256 bits (713), Expect = 7.504e-76 Identity = 232/760 (30.53%), Postives = 375/760 (49.34%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPI------TNAVKTTVKSVTSKPSNFTG---RTR----VNSAKSEN-------------------PSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSP---------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L + D I S + P+ T + + +V++K + TG R+R VN+A S P + +S + +++QS+ + A+ D S R R + VSQSQP +R SP S K I S G S N Q P + +++R E VA+ L + R + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKN--SDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSPAFSSAAALPPGSYASLGRIRTRRQSS----GSTTNVASTPSD-SRGRSRAKVVSQSQPGSRSSSPGKLLGSGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRIPGSVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1041 HSP 2 Score: 167.548 bits (423), Expect = 3.549e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1202 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1442
BLAST of CLIP-associating protein 1 vs. Ensembl Mouse
Match: Clasp1 (CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]) HSP 1 Score: 274.633 bits (701), Expect = 2.288e-74 Identity = 232/761 (30.49%), Postives = 375/761 (49.28%), Query Frame = 3
Query: 144 KQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPI------TNAVKTTVKSVTSKPSNFTG---RTR----VNSAKSEN-------------------PSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSP---------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDA---FETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
K+ GAV EEDF + F+ P ++I S ++L ES+ I L D DW+ RV+ L+ +R ++ A D+F Q+++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NL+ N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R ++R+ + F+ F + E L +L+ + QKALQ L + D I S + P+ T + + +V++K + TG R+R VN+A S P + +S + +++QS+ + A+ D S R R + VSQSQP +R SP S K I S G S N Q P + +++R E VA+ L + R + Y DD S+ SSV S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 291 KEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIP-VITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKN--SDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSPAFSSAAALPPGSYASLGRIRTRRQSS----GSTTNVASTPSD-SRGRSRAKVVSQSQPGSRSSSPGKLLGSGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRIPGSVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1042 HSP 2 Score: 167.548 bits (423), Expect = 3.612e-41 Identity = 99/251 (39.44%), Postives = 158/251 (62.95%), Query Frame = 3
Query: 2826 LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW-SLLKLNNSQARLLEVYIKKG 3569
LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L +I + + L A+KM K+++ +ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1203 LKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD---------HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRA 1443
BLAST of CLIP-associating protein 1 vs. Ensembl Mouse
Match: Clasp2 (CLIP associating protein 2 [Source:MGI Symbol;Acc:MGI:1923749]) HSP 1 Score: 171.4 bits (433), Expect = 2.044e-42 Identity = 151/492 (30.69%), Postives = 224/492 (45.53%), Query Frame = 3
Query: 138 NKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKT----------TVKSVTSKPSNFTGRTRVNSAKSENPSANS------------------STEYLYSKQQSNFGWRAAKPKTATARIDTSD-------------------------------PRGRIQKVSQSQPSTRDPSPS---CKSGYITYSNGA-------------SDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKK--SRRNSHD 1376
+K+ GAV E+DF + F P ++I S +EL E+L I L D DW R + L+ +R ++ A D F Q+++ LD +K DLRSQVVREACITVA LS + NK D+ E I+ +L NLV N K+M+TSG A+++I+ +T+ R++P +T+ TSKS +R+ E L L+ + W LE+ ++ + E IKKGI DAD + R ++R+ + FP E L SL+P+ QK+LQ L S S V +P ++ + + K T+ PS GR V +K+ NP S + + G A P + + DTSD R R + VSQSQP +R SP + T S+GA S + ++ASP+ S R V++G + SR +S D
Sbjct: 63 SKEGGAGAVDEDDFIKAFTDVPSVQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAAQYDCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNLVPNSAKVMATSGCAAIRFIIRHTHVPRLIP-LITSNCTSKSVPVRRRSFEFLDLLLQEWQTHSLERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQTYLKS-------SGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVSVGGSKA-NPLPGSLQRSRSDIDVNAAAGAKAHHAAGQAVRSGRLGAGALNPGSYASLEDTSDKMDGTASDDGRVRAKLSTPLVAVGNAKTDSRGRSRTKMVSQSQPGSRSGSPGRVLTTTALSTVSSGAQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRESSRD 545 HSP 2 Score: 171.014 bits (432), Expect = 2.487e-42 Identity = 113/319 (35.42%), Postives = 178/319 (55.80%), Query Frame = 3
Query: 2637 SHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIA-------ELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
S P +S G + + P+ N++++ S P+ +S S P N SIS K + A L D+++E+LKELSNHN+R EERK L+ L+K+ +E + + WDEHFKT+L LLLET+GD E IRA +L+VL+E+ + Q RF Y +LT++K LEAHKDP K V+++AEE + VL +++ + C+K+L +I + + L A+KM K+I+ ++E++ + + L ++ ES VRK V C+V +H VIG+ + L +L S+ +LL +YIK+
Sbjct: 990 SGPGMSDPRAGGDAADGSQPALDNKASL--------LHSMPLHSSPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDLSLDHSDLVAELLKELSNHNERIEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGDKE---------PTIRALALKVLKEILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVIERVSKETLNMLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRA 1290 HSP 3 Score: 140.584 bits (353), Expect = 6.305e-33 Identity = 80/269 (29.74%), Postives = 147/269 (54.65%), Query Frame = 3
Query: 1353 KSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
+ R S+ + DD S+ SS S++ +P++ +V +LN S W++RK GL + + + +L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P++K+++ +L+Y++ + + P TN+ + + ++ WT E KS+D+RK + +++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 625 RRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPRDF-TNSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 892
BLAST of CLIP-associating protein 1 vs. Ensembl Mouse
Match: Clasp2 (CLIP associating protein 2 [Source:MGI Symbol;Acc:MGI:1923749]) HSP 1 Score: 171.4 bits (433), Expect = 2.158e-42 Identity = 151/492 (30.69%), Postives = 224/492 (45.53%), Query Frame = 3
Query: 138 NKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKT----------TVKSVTSKPSNFTGRTRVNSAKSENPSANS------------------STEYLYSKQQSNFGWRAAKPKTATARIDTSD-------------------------------PRGRIQKVSQSQPSTRDPSPS---CKSGYITYSNGA-------------SDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKK--SRRNSHD 1376
+K+ GAV E+DF + F P ++I S +EL E+L I L D DW R + L+ +R ++ A D F Q+++ LD +K DLRSQVVREACITVA LS + NK D+ E I+ +L NLV N K+M+TSG A+++I+ +T+ R++P +T+ TSKS +R+ E L L+ + W LE+ ++ + E IKKGI DAD + R ++R+ + FP E L SL+P+ QK+LQ L S S V +P ++ + + K T+ PS GR V +K+ NP S + + G A P + + DTSD R R + VSQSQP +R SP + T S+GA S + ++ASP+ S R V++G + SR +S D
Sbjct: 63 SKEGGAGAVDEDDFIKAFTDVPSVQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAAQYDCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNLVPNSAKVMATSGCAAIRFIIRHTHVPRLIP-LITSNCTSKSVPVRRRSFEFLDLLLQEWQTHSLERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQTYLKS-------SGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVSVGGSKA-NPLPGSLQRSRSDIDVNAAAGAKAHHAAGQAVRSGRLGAGALNPGSYASLEDTSDKMDGTASDDGRVRAKLSTPLVAVGNAKTDSRGRSRTKMVSQSQPGSRSGSPGRVLTTTALSTVSSGAQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRESSRD 545 HSP 2 Score: 171.014 bits (432), Expect = 2.582e-42 Identity = 113/319 (35.42%), Postives = 178/319 (55.80%), Query Frame = 3
Query: 2637 SHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIA-------ELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
S P +S G + + P+ N++++ S P+ +S S P N SIS K + A L D+++E+LKELSNHN+R EERK L+ L+K+ +E + + WDEHFKT+L LLLET+GD E IRA +L+VL+E+ + Q RF Y +LT++K LEAHKDP K V+++AEE + VL +++ + C+K+L +I + + L A+KM K+I+ ++E++ + + L ++ ES VRK V C+V +H VIG+ + L +L S+ +LL +YIK+
Sbjct: 970 SGPGMSDPRAGGDAADGSQPALDNKASL--------LHSMPLHSSPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDLSLDHSDLVAELLKELSNHNERIEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGDKE---------PTIRALALKVLKEILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVIERVSKETLNMLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRA 1270 HSP 3 Score: 135.961 bits (341), Expect = 1.444e-31 Identity = 80/270 (29.63%), Postives = 148/270 (54.81%), Query Frame = 3
Query: 1353 KSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLE-NQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
+ R S+ + DD S+ SS S++ +P++ +V +LN S W++RK GL + + + +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P++K+++ +L+Y++ + + P TN+ + + ++ WT E KS+D+RK + +++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 604 RRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKRVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPRDF-TNSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 872
BLAST of CLIP-associating protein 1 vs. UniProt/SwissProt
Match: sp|A1A5G0|CLAP1_XENTR (CLIP-associating protein 1 OS=Xenopus tropicalis OX=8364 GN=clasp1 PE=1 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 5.348e-77 Identity = 222/725 (30.62%), Postives = 354/725 (48.83%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPITNAVKTTVKSVTSKPSNFTGRT------RVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATA---RIDT---------------SDPRG--RIQKVSQSQPSTRDPSPS--CKSGYITYSNGASDYKYTNNFQKKAS-----------------------------PNTYSSLRYKDAFETQVAEGLKKSRRNSHD---HYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
++I S ++L ESL I L D DW+ R+ L+ +R ++ A D F ++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NLV N KIM+TSG VA++ I+ T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R +R+ + F+ F K E+L +L+ + QKALQ L + D I S + P++ A ++ S S+ S T ++ R S N + + ++ + F AA P + A RI T +D RG R + VSQSQP +R SP SGY ++G + +K++ P+ L E VA+ LKK R ++ Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L FV + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 314 VQIYSSRDLEESLNKIREILSDDKHDWEQRISALKKIRSLLLAGAAEYDTFFPQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTVFNLVPNSAKIMATSGVVAIRLIIRQTHVPRLIP-IITSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHVSVLAETIKKGIHDADSEARIVARKCYWGFHSHFSKEAEQLFHTLESSYQKALQSHLKN--SDSIVSLPQSDRSSSSSQESLNRPLS-AKRSPTGSTVSRASTATSKSTPGSLQRSRSDIDVNAATCAKSKATSGASAAPFSSVAALPPGSYASLGRIRTRRQSSGSTTSTASTPADTRGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGIASGPQRVPQMPSSEKRSKIPRSQGCSRETSPSRIGLDRFGISQPGRIPSAMRVLSSSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1033 HSP 2 Score: 167.933 bits (424), Expect = 1.802e-40 Identity = 110/306 (35.95%), Postives = 181/306 (59.15%), Query Frame = 3
Query: 2664 GGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKI-LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
GG+++ + N++++ N P ++ GP N A ++I S K LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE++ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L +I + + L A+KM K+I+ ++ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L + +LL +YIK+
Sbjct: 1143 GGTDMVEGGRMALDNKTSLLNTQPPRAFT-GP--RGREYNPYAYSDSINSYDKTALKEAVFDDDMDQLRDVPIDHSDLVADLLKELSNHNERVEERKGALCELLKITREDSLAVWEEHFKTILLLLLETLGDKD---------HAIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGGKMKLLNLYIKRA 1435
BLAST of CLIP-associating protein 1 vs. UniProt/SwissProt
Match: sp|A1A5K2|CLA1B_XENLA (CLIP-associating protein 1-B OS=Xenopus laevis OX=8355 GN=clasp1b PE=1 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 6.638e-74 Identity = 227/729 (31.14%), Postives = 351/729 (48.15%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPIT---NAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATA---RIDT---------------SDPRG--RIQKVSQSQPSTRDPS----------------------PSCKSGYITYSNGAS-----DYKYTNNF---QKKASPNTYSSLRYKDAFETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
++I S ++L ESL I L D DW+ R+ L+ +R ++ A D+F Q ++ LD K DLRSQVVREACIT+ LS + NK D+ E ++ ++ NLV N KIM+TSG V ++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ S +AE IKKGI DAD + R +R+ + F+G F K E+L +L+ + QKALQ L + D I S + P++ + +TV TSK S R S N +A S T+ + F AA P + A RI T +D RG R + VSQSQP +R S PS K I S G S + F Q P+ L E VA+ L + R + Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + + V FL L FV + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 314 VQIYSSRDLEESLNKIREILSDDKHDWEQRISALKKIRSLLLAGAAEYDNFFQQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAVMPTVFNLVPNSTKIMATSGVVTIRLIIRHTHVPRLIP-IITSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHVSVLAETIKKGIHDADSEARIVARKCYWGFHGHFSKEAEQLFHALESSYQKALQSHLKN--SDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTVSRATSK-STTGSLQRSRSDIDVNAAATSKTKAASGASTAPFSSVAALPPGSYASLGRIRTRRQSSGSTTSTASTPADTRGRSRAKVVSQSQPGSRSSSPGKLLGSSYGGIATGPQRVPQMPSEKRSKIPRSQGCSRETSPSRTVLDRFGISQPGRIPSAMRVLSSSTDLEAAVADALLLGDSRNKMKPVRRRYEPYGMYSDDDANSDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLVGLQNLLKSQRLLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1037 HSP 2 Score: 168.318 bits (425), Expect = 1.388e-40 Identity = 111/306 (36.27%), Postives = 181/306 (59.15%), Query Frame = 3
Query: 2664 GGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKI-LKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
GG+++ + N++++ N P ++ GP N A ++I S K LK + + ++ ++P + D+++++LKELSNHN+R EERK L L+K+ RE+ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L +I + + L A+KM K+I+ ++ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1147 GGTDMVEGGRMALDNKTSLLNTQPPRAFT-GP--RGREYNPYAYSDSINSYDKTALKEAVFDDDMDQLRDVPIDHSDLVADLLKELSNHNERVEERKGALCELLKITREDNLAVWEEHFKTILLLLLETLGDKD---------HAIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRA 1439
BLAST of CLIP-associating protein 1 vs. UniProt/SwissProt
Match: sp|Q4U0G1|CLA1A_XENLA (CLIP-associating protein 1-A OS=Xenopus laevis OX=8355 GN=clasp1-a PE=2 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 3.805e-72 Identity = 222/733 (30.29%), Postives = 353/733 (48.16%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPITNAVKTTVKSVTSKPSNFTGRT------RVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATA---RIDT---------------SDPRG--RIQKVSQSQPSTRDPSP-----------------------SCKSGYITYSNGASDYKYTNNF--------QKKASPNTYSSLRYKDAFETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQT-VVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
++I S ++L ESL I L D DW+ R+ L+ +R ++ A D+F Q ++ LD K DLRSQVVREACIT+ LS + NK D+ E I+ ++ NLV N KIM+TSG VA++ I+ +T+ R++P +T+ TSKS ++R+ C + L L+ + W LE+ S +AE IKKGI DAD + + +R+ + F+ F K E L +L+ + QKALQ L + D I S + P++ ++ S S+ S+ T ++ R S N +A S ++ + F AA P + A RI T +D RG R + VSQSQP +R SP S K I S G S + Q+ P+ L E VA+ L + R + Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ +L +E K L +IF MF + + V FL L FV + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 314 VQIYSSRDLEESLNKIREILSDDKHDWEQRITALKKIRSLLLAGAAEYDNFFQQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTVFNLVPNSAKIMATSGIVAIRLIIRHTHVPRLIP-IITSNCTSKSVAVRRRCYDFLDLLLQEWQTHSLERHVSVLAETIKKGIHDADSEAKIVARKCYWGFHSHFSKEAEHLFHTLESSYQKALQSHLKN--SDSIVSLPQSDRSSSSSQESLNRPLSTK-RSPTGSTVSRASSTTSKSTPGSLQRSRSDIDVNAAATSKSKAASGASTAPFISVAALPPGSYASLGRIRTRRQSSGSTTSTASTPADTRGRSRAKVVSQSQPGSRSNSPGKLLGSSYGGIATGPQRVPQMPSSEKRSRIPRSQGCSRETSPSRIGLDRFGISQQGRIPSAMRVLSSSTDLEAAVADALLLGDSRNKKKPVRRRYEPYGMYSDDDANSDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1041 HSP 2 Score: 166.777 bits (421), Expect = 4.431e-40 Identity = 96/230 (41.74%), Postives = 147/230 (63.91%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
D+++++LKELSNHN+R EERK L L+K+ RE+ W+EHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L +I + + L A+KM K+I+ ++ES+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1224 DLVADLLKELSNHNERVEERKGALCELLKITREDNLAVWEEHFKTILLLLLETLGDKD---------HAIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIIQTA-DYPINLAAIKMQAKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRA 1443
BLAST of CLIP-associating protein 1 vs. UniProt/SwissProt
Match: sp|Q8BRT1|CLAP2_MOUSE (CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.508e-41 Identity = 151/492 (30.69%), Postives = 224/492 (45.53%), Query Frame = 3
Query: 138 NKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKT----------TVKSVTSKPSNFTGRTRVNSAKSENPSANS------------------STEYLYSKQQSNFGWRAAKPKTATARIDTSD-------------------------------PRGRIQKVSQSQPSTRDPSPS---CKSGYITYSNGA-------------SDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKK--SRRNSHD 1376
+K+ GAV E+DF + F P ++I S +EL E+L I L D DW R + L+ +R ++ A D F Q+++ LD +K DLRSQVVREACITVA LS + NK D+ E I+ +L NLV N K+M+TSG A+++I+ +T+ R++P +T+ TSKS +R+ E L L+ + W LE+ ++ + E IKKGI DAD + R ++R+ + FP E L SL+P+ QK+LQ L S S V +P ++ + + K T+ PS GR V +K+ NP S + + G A P + + DTSD R R + VSQSQP +R SP + T S+GA S + ++ASP+ S R V++G + SR +S D
Sbjct: 63 SKEGGAGAVDEDDFIKAFTDVPSVQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAAQYDCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNLVPNSAKVMATSGCAAIRFIIRHTHVPRLIP-LITSNCTSKSVPVRRRSFEFLDLLLQEWQTHSLERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQTYLKS-------SGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVSVGGSKA-NPLPGSLQRSRSDIDVNAAAGAKAHHAAGQAVRSGRLGAGALNPGSYASLEDTSDKMDGTASDDGRVRAKLSTPLVAVGNAKTDSRGRSRTKMVSQSQPGSRSGSPGRVLTTTALSTVSSGAQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRESSRD 545 HSP 2 Score: 171.014 bits (432), Expect = 1.714e-41 Identity = 113/319 (35.42%), Postives = 178/319 (55.80%), Query Frame = 3
Query: 2637 SHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIA-------ELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
S P +S G + + P+ N++++ S P+ +S S P N SIS K + A L D+++E+LKELSNHN+R EERK L+ L+K+ +E + + WDEHFKT+L LLLET+GD E IRA +L+VL+E+ + Q RF Y +LT++K LEAHKDP K V+++AEE + VL +++ + C+K+L +I + + L A+KM K+I+ ++E++ + + L ++ ES VRK V C+V +H VIG+ + L +L S+ +LL +YIK+
Sbjct: 969 SGPGMSDPRAGGDAADGSQPALDNKASL--------LHSMPLHSSPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDLSLDHSDLVAELLKELSNHNERIEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGDKE---------PTIRALALKVLKEILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVIERVSKETLNMLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRA 1269 HSP 3 Score: 140.969 bits (354), Expect = 3.727e-32 Identity = 80/269 (29.74%), Postives = 147/269 (54.65%), Query Frame = 3
Query: 1353 KSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
+ R S+ + DD S+ SS S++ +P++ +V +LN S W++RK GL + + + +L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P++K+++ +L+Y++ + + P TN+ + + ++ WT E KS+D+RK + +++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 604 RRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRIELKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPRDF-TNSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 871
BLAST of CLIP-associating protein 1 vs. UniProt/SwissProt
Match: sp|O75122|CLAP2_HUMAN (CLIP-associating protein 2 OS=Homo sapiens OX=9606 GN=CLASP2 PE=1 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 1.933e-41 Identity = 95/230 (41.30%), Postives = 149/230 (64.78%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
D+++E+LKELSNHN+R EERK L+ L+K+ +E + + WDEHFKT+L LLLET+GD E IRA +L+VL+E+ + Q RF Y +LT++K LEAHKDP K V+++AEE + VL +++ + C+K+L +I + + L A+KM K+I+ ++E++ + + L ++ ES VRK V C+V +H VIG+ + L +L S+ +LL +YIK+
Sbjct: 1058 DLVAELLKELSNHNERVEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGDKE---------PTIRALALKVLREILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIKVLCPIIQTA-DYPINLAAIKMQTKVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRA 1277 HSP 2 Score: 168.703 bits (426), Expect = 1.013e-40 Identity = 115/310 (37.10%), Postives = 171/310 (55.16%), Query Frame = 3
Query: 138 NKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKT----------TVKSVTSKPSNFTGRTRVNSAKS 1031
+K+ GAV E+DF + F P I+I S +EL E+L I L D DW R + L+ +R ++ A D F Q+++ LD +K DLRSQVVREACITVA LS + NK D+ E I+ +L NLV N K+M+TSG A+++I+ +T+ R++P +T+ TSKS +R+ E L L+ + W LE+ ++ + E IKKGI DAD + R ++R+ + FP E L SL+P+ QK+LQ L S S V +P ++ + + K T+ PS GR S+K+
Sbjct: 57 SKEGGAGAVDEDDFIKAFTDVPSIQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAAQYDCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNLVPNSAKVMATSGCAAIRFIIRHTHVPRLIP-LITSNCTSKSVPVRRRSFEFLDLLLQEWQTHSLERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQTYLKS-------SGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVSAGSSKA 358 HSP 3 Score: 140.198 bits (352), Expect = 6.628e-32 Identity = 85/282 (30.14%), Postives = 153/282 (54.26%), Query Frame = 3
Query: 1326 ETQVAEGLKKSRRNSHDHY---QSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLE-NQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
E VA+ LKK R ++ Y DD S+ SS S++ +P++ +V +LN S W++RK GL + + + +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ +++ + F + +F D+T P++K+++ +L+Y++ + + P N+ + + ++ WT E KS+D+RK + +++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 599 EEAVADALKKPARRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKRVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPGDF-INSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 879
BLAST of CLIP-associating protein 1 vs. TrEMBL
Match: A0A4S2L4P5 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_009853 PE=4 SV=1) HSP 1 Score: 530.791 bits (1366), Expect = 2.386e-162 Identity = 381/1246 (30.58%), Postives = 627/1246 (50.32%), Query Frame = 3
Query: 147 QEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLH--ADDWQHRVDNLRILRGIIK--ANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSN---FTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRI---QKVSQSQPSTRDPSPSCKSGYITYS-------------------NGASDYKY---------------------TNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSR-----------------RNSHDHYQSDDNTSETSSVISDQ--------LPS------FNEVVVLLNSKTWNDRKRGLNKAEKYITEAS-LKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQ--KIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSIS---------------------KILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKK 3566
Q GAV E+ F +F I S KEL + + I + L A++W+ RVD L+ LR ++ AN+F ++F+ +K L+ ++ C+ DLRS VVREACITVA+LS+++ + D F E I+++L+ L+SN KIM++SG +A+++I+ NT+S R+LP +++++ + + + C E L++I W + LEK + +++++GI DAD++ R SR AF F KFP LLQ+LD K+K ++K+L+ I + + ++ V VT +P+ T N A+S P N + N R A+ + + ++ PRGR + VSQSQP++R+ SP+ + Y++Y NG +D + + ++ SP S + + TQ + ++ R NS +SDDN SETSS SD+ PS E++ L+ W+DRK GL + Y+ S L P + + L +IF+ MF ++Q V+ F+ L F+ Y+ L DWLY+L+I+L Q +E V S + IQ+ L ++ ++ + F CC+++ D P IK+++CLLEY+K ++ + P L++ + ++ + I+ W+ E KS ++R+++S +VIKL+DLN++ F+ + + LP +DRAT +L AY + T T + + ++PT +A + + T RTP ++ PE + I+ TE LQ+L++ Q T+ TPR+ P + YD+ +LS + + + NG S +SS + T SN+ N P S G I + V + AP +G K+ KPVIGYQTLRKI E+PPED+MSEIL+ELSNHN+R+E+RKA + +LIK+ R+ T +WDE+FK L +LLET+GD+ E R+ +L+VLQEL +++ F ++ L ++KVL+A +D EK+V +AAEEC++ + +P +C +L +I+D T+ Q+ LPA+KM +++NS + + ++ + L + NH++S +RK S+ CMV + IG+ IW L L+ S+ RLL++YI +
Sbjct: 37 QGAGAVDEDMFRASFVPPMSITAYSSKELLDIMGRIKDNLSVPAEEWEKRVDALKTLRVLVANGANQF--EEFIPQLKTLETQVDGCLRDLRSSVVREACITVAYLSQQLGTRFDRFAETILQTLIGLMSNSAKIMASSGVLAIRFILENTHSPRLLPILMSSMTCKSNVTRKCIC-EFLEVIFRTWPVNVLEKHLGLLQDSLRRGIYDADQEARGFSRRAFPLFAEKFPDQANSLLQNLDAQKRKLIEKDLIGIGLGGIGDDGSARN--RSNSQSAVNPVTKRPNKPILGTAAVGANGARSRPPVTN--------QNDINTVGRYARHGSV---MSSAGPRGRGTGRKNVSQSQPTSREVSPT-RLAYMSYGIPGDYNQQGPYNAAGYAGRNGLADARQMGGATSTMSPYGVGTGSRIPRSQGASREPSPTRSVSGYQQPVYNTQYSSFRQRGRPSISTMSDYGDSVDTFMTNSRHPMESDDNFSETSSQCSDRSARSGFRRQPSVRVTSNLKEILGQLSGAQWSDRKDGLINLQNYMRSGSPLNPDDIRRLTEIFSKMFADSQRQVVSLFMDTLQFFIKEYNPLLRDWLYTLLIRLFNRQGSEAVGSYQKAIQEALFVVRSHFPLNLQFTNCCRYIMDNAQAPNIKVKVCLLEYLKDLILMMSPDALNSPSQEVTSAIARIISWSGEPKSPEIRRMASRVVIKLYDLNSTSFAAISQGLPRAIKDRATEVLKAY-------QKTTTGTGISSL---MEPTPTAPAWKPQSVDQDGHLSHGAT-----------------------RTPNDPGRLSPETMNNMIRQTTEGLQSLTVG-------------------------------------MQAPTAG--TPRRVSTGSVPNTAHQYDS-----YLSYNPA--QAAATNGMSEISSGVL-RTMQPSNIPN---PSSMSPGIIPSPVSHSYAAPPVPLGDSPTSARFDNRPLGTMGFDQGDGPKLKKPVIGYQTLRKIREMPPEDIMSEILQELSNHNERYEQRKASMLKLIKLLRDGTICNWDEYFKPTLLILLETLGDD---------GCETRSLALKVLQELVRAKPELFHDFACLFVIKVLDACRDEEKTVTRAAEECAKSIAQHLPPDLCFSVLTPLIND-TKMQVNLPAVKMQEHVVRNSPPDLVTDVLDVIIPGLIVACNHEDSSMRKASIFCMVAIALKIGDAIWEHLNDLHVSKKRLLKLYIDR 1172
BLAST of CLIP-associating protein 1 vs. TrEMBL
Match: H2KQ22 (CLIP-associating protein 1 (Fragment) OS=Clonorchis sinensis OX=79923 GN=CLF_103052 PE=4 SV=1) HSP 1 Score: 482.256 bits (1240), Expect = 1.720e-145 Identity = 352/1182 (29.78%), Postives = 595/1182 (50.34%), Query Frame = 3
Query: 156 GAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLH--ADDWQHRVDNLRILRGIIK--ANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFK-GDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSS---TEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRI---QKVSQSQPSTRDPSPSCKSGYITYS-------------------NGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDH----YQSDDNTSETSSVISDQLPSFNEVVVLLNS-KTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTV----VIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQ--KIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIG---SISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKK 3566
GAV EE F +F I S KEL + + I + L A++W+ RVD L+ LR ++ AN+F ++F+ +K L+ ++ C+ DLRS VVREACITVA+LS+++ + D F E I+++L+ L+SN KIM++SG +A+++I+ NT+S R+LP +++++ + + + C E L++I W + LEK + +++++GI DAD++ R SR AF F KFP LLQ+LD K+K ++K+L+ G D + +++ V +KP T N A+S P N + T Y + S + ++ PRGR + VSQSQP++R+ SP+ + Y++Y NG +D + SP Y A +++ SR S YQ ++ SS PS + + +S T+ R +++ +E S + +R A S F +V V+ F+ L F+ Y+ L DWLY+L+I+L Q +E V S + IQ+ L ++ ++ + F+ CC+++ D P IK+++CLLEY+K ++ + P L++ + ++ + I+ W+ E KS ++R+++S +VIKL+DLN++ F+ + + LP +DRAT +L AY + T T + + ++PT +A + + S + RTP ++ PE + I+ TE LQ+L++ Q T+ TPR+ P + YD+ +LS + + + NG S +S + T SN+ NP S G I + V + AP +G + ++ +G + E+PPED+MSEIL+ELSNHN+R+E+RKA + +LIK+ R+ T +WDE+FK L +LLET+GD+ E R+ +L+VLQEL +++ F ++ L ++KVL+A +D EK+V +AAEEC++ + +P +C +L +I+D T+ Q+ LPA+KM +++NS + + ++ + L + NH++S +RK S+ CMV + IG+ IW L L+ S+ RLL++YI +
Sbjct: 2 GAVDEEMFRASFVPAMSITAYSSKELLDIMGRIKDNLSVSAEEWEKRVDALKTLRVLVANGANQF--EEFIPQLKTLETQVDGCLRDLRSSVVREACITVAYLSQQLGTRFDRFAETILQTLIGLMSNSAKIMASSGVLAIRFILENTHSPRLLPILMSSMTCKSNVTRKCIC-EFLEVIFRTWPVNVLEKHLGLLQDSLRRGIYDADQEARGFSRRAFPLFAEKFPDQANSLLQNLDAQKRKLIEKDLIGIGLGGVADDSSARNRSNSHSAVNPVTKRPNKPILGTAAVGANGARSRPPVTNQNDINTVGRYVRHGS--------------VVSSAGPRGRGNGRKNVSQSQPTSREVSPT-RLAYMSYGIPGDYNQQGPYNAAGYAGRNGLADARQMGGATMTMSP-------YGAAAGSRIPRSQGASREPSPTRSVSGYQQPVYNTQYSSFRQRGRPSISTMSDYGDSVDTFMTNSRHPMESDDNFSETSSQCSDRSA-----RSGFRRQPSVRVTSVVSLFMDTLQFFIKEYNPLLRDWLYTLLIRLFNRQGSEAVGSYQKAIQETLFVVRSHFPLNLQFINCCRYIMDNAQAPNIKVKVCLLEYLKDLILMMSPDALNSPSQEVTSAIARIISWSGEPKSPEIRRMASRVVIKLYDLNSTSFAAISQGLPRAIKDRATEVLKAY-------QKTTTGTGISSL---MEPTPTAPAW-KPQSIDQDGHLSHGAT----------------------RTPNDPGRLSPETMNNMIRQTTEGLQSLTVG-------------------------------------MQAPTAG--TPRRVSTGSVPNAAHQYDS-----YLSYDPA--QTAATNGMSEISGGVL-RTMQPSNIP---NPSSMSPGIIPSPVSHSYAAPPVPLGDSPTSARFDNRPLGTMGFDQGDEMPPEDIMSEILQELSNHNERYEQRKASMLKLIKLLRDGTICNWDEYFKPTLLILLETLGDD---------GCETRSLALKVLQELVRAKPELFHDFACLFVIKVLDACRDEEKTVTRAAEECAKSIAQHLPPDLCFSVLTPLIND-TKMQVNLPAVKMQEHVVRNSPPDLVTDVLDVIIPGLIVACNHEDSSMRKASIFCMVAIALKIGDAIWEHLNDLHVSKKRLLKLYIDR 1060
BLAST of CLIP-associating protein 1 vs. TrEMBL
Match: A0A4Z2DGD7 (CLIP-associating protein isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_001234 PE=4 SV=1) HSP 1 Score: 411.764 bits (1057), Expect = 1.213e-119 Identity = 269/837 (32.14%), Postives = 446/837 (53.29%), Query Frame = 3
Query: 1164 KVSQSQPSTRDPSP--SCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAE-------------GLKKSRRNSHDHYQSDDNTSETSSVISDQ----LPSFN------------EVVVLLNSKTWNDRKRGLNKAEKYITEA-SLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSN--VSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSV-HSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKK 3566
+V +SQ ++R+PSP S SGY S Y++ N FQ + + + Y+ + G S N+ Y SDDN SETSS S++ +P + E++ L + W+D+K GL + Y+ L P + ++L +IF+ MF ++Q+ V+ F+ L F+ Y+ L DWLY+L+I+LL Q++E + S + IQ+ L +L ++ F CC F+ D + P +++ CLLEY+K ++ + P + + ++ +G I+ W+AE KS D+R+++S +VIKLFDLNA+ FS LL+ LP QDRA +L Y + T T + + T NS+ K + + H ++ + + + S++++ S H ++ PE + ++ T+ LQ+LSL + +++ + ++ PG Q G +N + T+ P L P+N + Q + N + + G N S S Y +N++ P++T + + D P K+ KPVIGYQTL+KI E+PPED+MSEIL+ELSNHN+R+E+RK C+ +L+K+ R+ ++WDE+FK L +LLET+GD+ E RA +LRVLQEL +++ F ++ L ++KVLEA +D EKSV++AAEEC+ + ++P+++CL +L +I+D ++ + LPA+KM +++++NS+ E + VN L L I NH+ES +RK SV C+V + +G+ IWS L +LN + RLL++YI +
Sbjct: 273 RVPRSQGASREPSPTRSTASGYTMPS-----YQHNNTFQLSGA-SQIGQMNYRKQQRPSLGTLSDCADLGDGPLYGRHYSVGNNRGPYGSDDNFSETSSQCSERSGRSVPGYRRQPSVKVTSNLKEIIAQLQAVQWSDKKDGLTNLQNYLRSGYPLNPDDIRSLTEIFSKMFADSQSKVVSLFMDTLQFFIKEYNPLLRDWLYTLLIRLLYRQSHEALSSHQKAIQETLFVLRSHFPLNSQFNSCCHFIMDNAHTPNFRVKTCLLEYLKDLILMMSPDAIANPSNEVTNAIGKIISWSAEPKSADVRRMASRVVIKLFDLNATSFSTLLQSLPRGVQDRAHEVLKTY-------QKTATGGGLMNLTDTNHNHNSSWKSSSVDQDHIISSPPGSGRYASIGGPCSTYSAQRS----HDSASSGRVSPESMNRIMRETTDGLQSLSLGGGYSGMLTSVTSPTRRASADPGFTTSPLQYG--TNDYNAHITNGNPGV---LRTMQPSNFSNSQQAVSQPCIIPSNMNQTYASSEGVPNDPTSQSTYGLRTNKA--------------PLNTLINYDPTDGP--------KLKKPVIGYQTLKKIREMPPEDIMSEILQELSNHNERYEQRKTCMLKLMKLLRDGAISNWDEYFKPTLLILLETLGDD---------GHETRALALRVLQELVRAKPELFHDFAYLFVIKVLEACRDSEKSVVRAAEECANTVAQSLPQELCLNVLTPLIND-SQLHINLPAIKMQMQVVQNSSPELVHEFVNALIPGLVIACNHEESAIRKASVFCLVAIAMKLGDDIWSYLTELNAGKKRLLKLYIDR 1055 HSP 2 Score: 97.4413 bits (241), Expect = 2.107e-16 Identity = 74/243 (30.45%), Postives = 130/243 (53.50%), Query Frame = 3
Query: 540 MSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTR------VNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASD 1250
M+TSG VA+++I+ NT S R+LP ++ +S+ + + + C E L++I W LEK+ S + +A+++GISDAD++ R SR +F F KFP+ LQ+LD K+K ++K+L++ G ++ ++ T + ++ S+ SN T ++ V S + N S L S+ + N R + + + D+ + VSQSQP++R+ SPS + + TY +D
Sbjct: 1 MATSGVVAMRFILENTFSSRLLPILISALSSKSNITRKCIC-EFLEIIFRTWPTNILEKNLSVLQDALRRGISDADQEARQFSRRSFPLFVEKFPEQANLFLQNLDAQKRKLIEKDLIA-AGLPLEGIVSGEINTTASSRSQSGGAGSQ-SNLTYQSTKRPNRPVLGTSSLANNTNRSRPPLTSQNEYNTVGRYVRQGSIVSNYDSRSLHTGRKLVSQSQPTSREVSPSRLAYFTTYGATVND 240
BLAST of CLIP-associating protein 1 vs. TrEMBL
Match: A0A4Z2DG68 (CLIP-associating protein isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_001234 PE=4 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 3.002e-116 Identity = 272/851 (31.96%), Postives = 447/851 (52.53%), Query Frame = 3
Query: 1164 KVSQSQPSTRDPSP--SCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAE-------------GLKKSRRNSHDHYQSDDNTSETSSVISDQ----LPSFN------------EVVVLLNSKTWNDRKRGLNKAEKYITEA-SLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAY-----------LSSQQAVRSTETASDVGDCRVTVKP-TNSASKFNRS-NSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSN--VSSSLYPSTSNESNVDN--KYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKK 3566
+V +SQ ++R+PSP S SGY S Y++ N FQ + + + Y+ + G S N+ Y SDDN SETSS S++ +P + E++ L + W+D+K GL + Y+ L P + ++L +IF+ MF ++Q+ V+ F+ L F+ Y+ L DWLY+L+I+LL Q++E + S + IQ+ L +L ++ F CC F+ D + P +++ CLLEY+K ++ + P + + ++ +G I+ W+AE KS D+R+++S +VIKLFDLNA+ FS LL+ LP QDRA +L Y L+ ++ S G R P T S RS + H ++ + + + S++++ S H ++ PE + ++ T+ LQ+LSL + +++ + ++ PG Q G +N + T+ P L P+N + Q + N + + G N S S Y +N++ ++ Y+P + GP K+ KPVIGYQTL+KI E+PPED+MSEIL+ELSNHN+R+E+RK C+ +L+K+ R+ ++WDE+FK L +LLET+GD+ E RA +LRVLQEL +++ F ++ L ++KVLEA +D EKSV++AAEEC+ + ++P+++CL +L +I+D ++ + LPA+KM +++++NS+ E + VN L L I NH+ES +RK SV C+V + +G+ IWS L +LN + RLL++YI +
Sbjct: 441 RVPRSQGASREPSPTRSTASGYTMPS-----YQHNNTFQLSGA-SQIGQMNYRKQQRPSLGTLSDCADLGDGPLYGRHYSVGNNRGPYGSDDNFSETSSQCSERSGRSVPGYRRQPSVKVTSNLKEIIAQLQAVQWSDKKDGLTNLQNYLRSGYPLNPDDIRSLTEIFSKMFADSQSKVVSLFMDTLQFFIKEYNPLLRDWLYTLLIRLLYRQSHEALSSHQKAIQETLFVLRSHFPLNSQFNSCCHFIMDNAHTPNFRVKTCLLEYLKDLILMMSPDAIANPSNEVTNAIGKIISWSAEPKSADVRRMASRVVIKLFDLNATSFSTLLQSLPRGVQDRAHEVLKTYQKTATGGGLMNLTDTNHNHNSSWKSSSGPLRKYSLPVTTGRSSMTRSVDQDHIISSPPGSGRYASIGGPCSTYSAQRS----HDSASSGRVSPESMNRIMRETTDGLQSLSLGGGYSGMLTSVTSPTRRASADPGFTTSPLQYG--TNDYNAHITNGNPGV---LRTMQPSNFSNSQQAVSQPCIIPSNMNQTYASSEGVPNDPTSQSTYGLRTNKAPLNTLINYDP---TDGP--------------------KLKKPVIGYQTLKKIREMPPEDIMSEILQELSNHNERYEQRKTCMLKLMKLLRDGAISNWDEYFKPTLLILLETLGDD---------GHETRALALRVLQELVRAKPELFHDFAYLFVIKVLEACRDSEKSVVRAAEECANTVAQSLPQELCLNVLTPLIND-SQLHINLPAIKMQMQVVQNSSPELVHEFVNALIPGLVIACNHEESAIRKASVFCLVAIAMKLGDDIWSYLTELNAGKKRLLKLYIDR 1243 HSP 2 Score: 184.882 bits (468), Expect = 2.967e-43 Identity = 129/376 (34.31%), Postives = 214/376 (56.91%), Query Frame = 3
Query: 147 QEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHA--DDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTR------VNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASD 1250
Q GAV E+ F Q+F + I SS KEL + + I + L ++W+ RVD L+ LR I+ D+F+ ++K L+ I + DLRS VVREACITVAFLS+EI+++ D F E ++++++ L+SN K+M+TSG VA+++I+ NT S R+LP ++ +S+ + + + C E L++I W LEK+ S + +A+++GISDAD++ R SR +F F KFP+ LQ+LD K+K ++K+L++ G ++ ++ T + ++ S+ SN T ++ V S + N S L S+ + N R + + + D+ + VSQSQP++R+ SPS + + TY +D
Sbjct: 36 QGAGAVDEDVFRQSFIPSMSITASSAKELIDIMNRIKDTLSGNPEEWEKRVDALKTLRAIVANGALQYDEFIPSLKTLENCIDLSLRDLRSSVVREACITVAFLSQEIRSRFDRFAESVLQTIIALLSNSAKVMATSGVVAMRFILENTFSSRLLPILISALSSKSNITRKCIC-EFLEIIFRTWPTNILEKNLSVLQDALRRGISDADQEARQFSRRSFPLFVEKFPEQANLFLQNLDAQKRKLIEKDLIA-AGLPLEGIVSGEINTTASSRSQSGGAGSQ-SNLTYQSTKRPNRPVLGTSSLANNTNRSRPPLTSQNEYNTVGRYVRQGSIVSNYDSRSLHTGRKLVSQSQPTSREVSPSRLAYFTTYGATVND 408
BLAST of CLIP-associating protein 1 vs. TrEMBL
Match: A0A5K4EVE1 (Putative clasp2 protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 402.519 bits (1033), Expect = 5.313e-115 Identity = 273/840 (32.50%), Postives = 448/840 (53.33%), Query Frame = 3
Query: 1164 KVSQSQPSTRDPSP--SCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVA---------------EGLKKSRRNSHDHYQSDDNTSETSSVISDQ----LPSFN------------EVVVLLNSKTWNDRKRGLNKAEKYITEA-SLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSAS-KFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQN---SHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKK 3566
+V +SQ ++R+ SP S SGY S Y++ N+FQ + N + Y+ + + + G S N+ Y SDDN SETSS S++ +P + E++ L + W+DRK GL + Y+ L P + L +IF+ MF ++Q+ V+ F+ L F+ Y+ L DWLY+L+I+LL Q++E + S + IQ+ L +L ++ F CC F+ D + P +++ CLLEYMK ++ + P L+ + ++ +G I+ W+AE KS D+R+++S +VIKLFDLN++ FS LL+ LP QDRA +L Y +TA+ G +T NS S K + + H + + + + + Y S + +S + ++ PE + I+ T+ LQ+LS+ +L++ S T + S++P + T N+Y+ A N NT + + + N S P + + + S++ PS ++ +P S+ + T+ + G K+ KPVIGYQTL+KI E+PPED+MSEIL+ELSNHN+R+E+RK C+ +LIK+ R+ ++WDE+FK L +LLET+GD+ E RA +LRVLQEL +++ F ++ L ++KVLEA +D EKSV++AAE+C+ + +P+++CL +L +I+D ++ + LPA+KM +++I+NS+ E + +N L L I NH+ES +RK SV C+V + +G+ IWS L +LN + RLL++YI +
Sbjct: 445 RVPRSQGASRETSPTRSTASGYTMPS-----YQHNNSFQLTGT-NQIGQMNYRRQQQQRPSLGTLSDCADLGDGPLYGRHYSTGNNRGPYGSDDNFSETSSQCSERSGRSVPGYRRQSSSKVTSNLKEIISQLQAVQWSDRKDGLTNLQNYMRSGYPLNPDDIHCLTEIFSKMFADSQSKVVSLFMDTLQFFIKEYNPLLRDWLYTLLIRLLYRQSHEALSSHQKAIQETLFVLRSHFPLNTQFNSCCHFIMDNAHTPNFRVKTCLLEYMKDLILMMSPDLIANPSNEVINAVGKIISWSAEPKSADVRRMASRVVIKLFDLNSTSFSNLLQSLPRGVQDRAHEVLKTY---------QKTATGGGLINLTDTNHNSPSWKSSSVDQDHMIFSPPSSGRYGSISGPYYSSQRSHNSAG----SDSGRVSPESMNRIIRETTDGLQSLSMGASG---GGILTSVGITSPT----------RRVSADPSFTT------------NDYTYATN---GNTGVLRTVQPNNFPNSQP--TALQSPNIIPSNVNPSYASSQGTTASNDPTLQSTYGLRTNKALLNTLINYDPGDGPKLKKPVIGYQTLKKIREMPPEDIMSEILQELSNHNERYEQRKTCMLKLIKLLRDGVISNWDEYFKPTLLILLETLGDD---------GHETRALALRVLQELVRAKPELFHDFAYLFVIKVLEACRDSEKSVVRAAEDCANTVAQNLPQELCLNVLTPLIND-SQLHINLPAIKMQMQVIQNSSPELVHEFINALIPGLVIACNHEESAIRKASVFCLVAIAMKLGDDIWSYLTELNAGKKRLLKLYIDR 1225 HSP 2 Score: 189.504 bits (480), Expect = 9.807e-45 Identity = 132/373 (35.39%), Postives = 218/373 (58.45%), Query Frame = 3
Query: 147 QEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHA--DDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDE-IDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPR--GRIQKVSQSQPSTRDPSPSCKSGYITYSNGASD 1250
Q GAV E+ F Q+F + I SS KEL E + I + L ++W+ RVD L+ LR I+ D+F+ +K L+ I + DLRS VVREACITVAFLS+EI+N+ D F E ++++++ L+SN K+M+TSG VA+++I+ NT S R+LP ++++S+ + + + C E L++I W + LEK+ S + +A+++GISDAD++ R +R +F F KFP+ LQ+LD K+K ++K+L++ E I + D + + + ++T + + R + ++ N + N S L S+ + N R+ + + + D S PR GR + VSQSQP++R+ SPS + + Y S+
Sbjct: 36 QGAGAVDEDVFRQSFIPSMSITASSGKELTEIINRIKDALSGNPEEWEKRVDALKTLRAIVANGALQYDEFIPLLKTLENSIDLSLRDLRSSVVREACITVAFLSQEIRNRFDRFAESVLQTIIALLSNSAKVMATSGVVAMRFILENTCSSRLLPILISSLSSKSNVTRKCIC-EFLEIIFRTWPLNILEKNLSVLQDALRRGISDADQEARLFTRRSFPLFVAKFPEQANLFLQNLDSQKRKLIEKDLIAAGLSEGIGAGDTATTGSSRSQPGSQSNLTYQSTKRPNRPVLGTSSLAN-NTNRSRPPLTSQNEYNTVGRSYRQGSIASNYD-SRPRQIGR-KLVSQSQPTSREVSPSRLAYFTAYGTTTSN 404
BLAST of CLIP-associating protein 1 vs. Ensembl Cavefish
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 306.99 bits (785), Expect = 1.005e-84 Identity = 228/733 (31.11%), Postives = 362/733 (49.39%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSAD-----------------VFKVPITNAVKTTVKSVTSKPSNFTG---RTRVN-------SAKSENPSANSSTEY---------LYSKQQSNFGWRAAKPKT--------ATARIDTSDPRGRIQK--VSQSQPSTRDPSPSCKSGY--------------------ITYSNGAS-----------DYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDH---YQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
I+I S +EL +S+ I L D DW+HRV L+ +R ++ A + FLQ ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N KIM+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKG+ DAD + R+ +R+ + F+G F K E+L Q+L+ T QKALQ L S D I S K + N+ T K +TSK S+ G R+R + SAKS P+ ++ + Y+ + G+ + +T A + +D RGR + VSQSQP +R SP G+ I S G S + + + AS N L E VA+ L++ R ++ Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + PS N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 304 IQIYSSRELEDSMNKIREVLSDDKHDWEHRVAALKKVRSLLLAGATDHEGFLQQLRQLESAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKIMATSGIAAIRLIIRHTHYPRLIP-IMTSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHIAVLMETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQSHLKS--SDSIMSLPQSDRSSSSSQESLNRPLSAKAAVGNSSVTRTKVITSKVSSTPGSLQRSRSDVDVNAAASAKSRMPTVPAAAPFSSATALPPGSYASLDATPGYMEGRVRTRRQSSVNSAGGGVSVTDSRGRSRAKVVSQSQPGSRSSSPGKLGGHSYGRVPRATGSATPSEKRSKIPRSQGCSRETSPSRSGQDRFGLIHQARISASVNAMRILNTGMEVEAAVADALRRPMRRRYESPGMYSDDDANSDASSACSERSYSSRNGGVPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFITLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPSDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1032 HSP 2 Score: 164.851 bits (416), Expect = 1.900e-40 Identity = 103/283 (36.40%), Postives = 165/283 (58.30%), Query Frame = 3
Query: 2730 YNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI-WSLLKLNNSQARLLEVYIKKG 3569
Y+ D V RD + + G +KI+ P + + P + +++ ++LKELS H++R EER+A L L+K+ R+++ W+EHFKT+L LLLETMGD + IRA +LRVL+E+ +SQ RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L ++ + + L A+KM K+I+ ++S+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1223 YDKSALREAVFDDDVEQFRDGRRQDFGE-NKIMHP-------KSFSTGPTQNLELVGDLLKELSGHSERVEERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETMGDKD---------HTIRALALRVLKEILRSQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTA-DYPIDLAAIKMQTKVIERIPQDSLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKQHLGQLTGSKMKLLNLYIKRA 1487
BLAST of CLIP-associating protein 1 vs. Ensembl Cavefish
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 301.597 bits (771), Expect = 2.837e-83 Identity = 227/725 (31.31%), Postives = 361/725 (49.79%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSAD-----------------VFKVPITNAVKTTVKSVTSKPSNFTG---RTRVN-------SAKSENPSANSSTEY-----LYSKQQSNFG----WRAAKPKTATARIDTSDPRG--RIQKVSQSQPSTRDPSPSCKSGY--------------------ITYSNGAS-----------DYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDH---YQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
I+I S +EL +S+ I L D DW+HRV L+ +R ++ A + FLQ ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N KIM+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKG+ DAD + R+ +R+ + F+G F K E+L Q+L+ T QKALQ L S D I S K + N+ T + +TSK S+ G R+R + SAKS P+ ++ + L ++ G R + +A + +D RG R + VSQSQP +R SP G+ I S G S + + + AS N L E VA+ L++ R ++ Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + PS N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 273 IQIYSSRELEDSMNKIREVLSDDKHDWEHRVAALKKVRSLLLAGATDHEGFLQQLRQLESAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKIMATSGIAAIRLIIRHTHYPRLIP-IMTSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHIAVLMETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQSHLKS--SDSIMSLPQSDRSSSSSQESLNRPLSAKAAVGNSSVTRI--ITSKVSSTPGSLQRSRSDVDVNAAASAKSRMPTVPAAAPFSSATALPPGSYASLGRVRTRRQSSVNSAGGGVSVTDSRGRSRAKVVSQSQPGSRSSSPGKLGGHSYGRVPRATGSATPSEKRSKIPRSQGCSRETSPSRSGQDRFGLIHQARISASVNAMRILNTGMEVEAAVADALRRPMRRRYESPGMYSDDDANSDASSACSERSYSSRNGGVPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFITLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPSDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 991 HSP 2 Score: 162.155 bits (409), Expect = 1.240e-39 Identity = 93/230 (40.43%), Postives = 147/230 (63.91%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI-WSLLKLNNSQARLLEVYIKKG 3569
+++ ++LKELS H++R EER+A L L+K+ R+++ W+EHFKT+L LLLETMGD + IRA +LRVL+E+ +SQ RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L ++ + + L A+KM K+I+ ++S+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1165 ELVGDLLKELSGHSERVEERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETMGDKD---------HTIRALALRVLKEILRSQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTA-DYPIDLAAIKMQTKVIERIPQDSLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKQHLGQLTGSKMKLLNLYIKRA 1384
BLAST of CLIP-associating protein 1 vs. Ensembl Cavefish
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 298.13 bits (762), Expect = 5.946e-82 Identity = 229/733 (31.24%), Postives = 359/733 (48.98%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSAD-----------------VFKVPITNAVKTTVKSVTSKPSNFTG---RTRVN-------SAKSENPSANSSTEY-----LYSKQQSNFGW----RAAKPKTATARIDTSDPRGRIQK--VSQSQPSTRDPSPSCKSGY--------------------ITYSNGASD-----------YKYTNNFQKKASPNTYSSLRYKDAFETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
I+I S +EL +S+ I L D DW+HRV L+ +R ++ A + FLQ ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N KIM+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKG+ DAD + R+ +R+ + F+G F K E+L Q+L+ T QKALQ L S D I S K + N+ T K +TSK S+ G R+R + SAKS P+ ++ + L ++ G R + +A + +D RGR + VSQSQP +R SP G+ I S G S + + + AS N L E VA+ L + R S Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + PS N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 304 IQIYSSRELEDSMNKIREVLSDDKHDWEHRVAALKKVRSLLLAGATDHEGFLQQLRQLESAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKIMATSGIAAIRLIIRHTHYPRLIPI-MTSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHIAVLMETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQSHLKS--SDSIMSLPQSDRSSSSSQESLNRPLSAKAAVGNSSVTRTKVITSKVSSTPGSLQRSRSDVDVNAAASAKSRMPTVPAAAPFSSATALPPGSYASLGRVRTRRQSSVNSAGGGVSVTDSRGRSRAKVVSQSQPGSRSSSPGKLGGHSYGRVPRATGSATPSEKRSKIPRSQGCSRETSPSRSGQDRFGLIHQARISASVNAMRILNTGMEVEAAVADALLLGDSRNKRRPMRRRYESPGMYSDDDANSDASSACSERSYSSRNGGVPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFITLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPSDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1032 HSP 2 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 95/261 (36.40%), Postives = 152/261 (58.24%), Query Frame = 3
Query: 2730 YNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI 3506
Y+ D V RD + + G +KI+ P + + P + +++ ++LKELS H++R EER+A L L+K+ R+++ W+EHFKT+L LLLETMGD + IRA +LRVL+E+ +SQ RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L ++ + + L A+KM K+I+ ++S+ + ++ L ++ ES VRK SV C+V ++ VIGE +
Sbjct: 1183 YDKSALREAVFDDDVEQFRDGRRQDFGE-NKIMHP-------KSFSTGPTQNLELVGDLLKELSGHSERVEERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETMGDKD---------HTIRALALRVLKEILRSQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTA-DYPIDLAAIKMQTKVIERIPQDSLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDL 1425
BLAST of CLIP-associating protein 1 vs. Ensembl Cavefish
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 295.434 bits (755), Expect = 4.557e-81 Identity = 228/746 (30.56%), Postives = 361/746 (48.39%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSAD-----------------VFKVPITNAVKTTVKSVTSKPSNFTG---RTRVN-------SAKSENPSANSSTEY---------LYSKQQSNFGWRAAKPKT--------ATARIDTSDPRGRIQK--VSQSQPS---------------------------------TRDPSPSCKSGYITYSNGAS-----------DYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDH---YQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
I+I S +EL +S+ I L D DW+HRV L+ +R ++ A + FLQ ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N KIM+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKG+ DAD + R+ +R+ + F+G F K E+L Q+L+ T QKALQ L S D I S K + N+ T K +TSK S+ G R+R + SAKS P+ ++ + Y+ + G+ + +T A + +D RGR + VSQSQ S T +PS K I S G S + + + AS N L E VA+ L++ R ++ Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + PS N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 304 IQIYSSRELEDSMNKIREVLSDDKHDWEHRVAALKKVRSLLLAGATDHEGFLQQLRQLESAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKIMATSGIAAIRLIIRHTHYPRLIP-IMTSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHIAVLMETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQSHLKS--SDSIMSLPQSDRSSSSSQESLNRPLSAKAAVGNSSVTRTKVITSKVSSTPGSLQRSRSDVDVNAAASAKSRMPTVPAAAPFSSATALPPGSYASLDATPGYMEGRVRTRRQSSVNSAGGGVSVTDSRGRSRAKVVSQSQRSKSANPVGGKTYAGSRSSSPGKLGGHSYGRVPRATGSATPSEKRSKIPRSQGCSRETSPSRSGQDRFGLIHQARISASVNAMRILNTGMEVEAAVADALRRPMRRRYESPGMYSDDDANSDASSACSERSYSSRNGGVPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFITLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPSDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1045 HSP 2 Score: 154.836 bits (390), Expect = 2.144e-37 Identity = 95/261 (36.40%), Postives = 152/261 (58.24%), Query Frame = 3
Query: 2730 YNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI 3506
Y+ D V RD + + G +KI+ P + + P + +++ ++LKELS H++R EER+A L L+K+ R+++ W+EHFKT+L LLLETMGD + IRA +LRVL+E+ +SQ RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L ++ + + L A+KM K+I+ ++S+ + ++ L ++ ES VRK SV C+V ++ VIGE +
Sbjct: 1236 YDKSALREAVFDDDVEQFRDGRRQDFGE-NKIMHP-------KSFSTGPTQNLELVGDLLKELSGHSERVEERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETMGDKD---------HTIRALALRVLKEILRSQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTA-DYPIDLAAIKMQTKVIERIPQDSLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDL 1478
BLAST of CLIP-associating protein 1 vs. Ensembl Cavefish
Match: CLASP1 (cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]) HSP 1 Score: 295.049 bits (754), Expect = 5.332e-81 Identity = 228/746 (30.56%), Postives = 361/746 (48.39%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSAD-----------------VFKVPITNAVKTTVKSVTSKPSNFTG---RTRVN-------SAKSENPSANSSTEY---------LYSKQQSNFGWRAAKPKT--------ATARIDTSDPRGRIQK--VSQSQPS---------------------------------TRDPSPSCKSGYITYSNGAS-----------DYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDH---YQSDDNTSETSSVISDQ--------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
I+I S +EL +S+ I L D DW+HRV L+ +R ++ A + FLQ ++ L+ K DLRSQVVREACIT+ LS + NK D+ E I+ +L+NLV N KIM+TSG A++ I+ +T+ R++P +T+ TSKS ++R+ C E L L+ + W LE+ + + E IKKG+ DAD + R+ +R+ + F+G F K E+L Q+L+ T QKALQ L S D I S K + N+ T K +TSK S+ G R+R + SAKS P+ ++ + Y+ + G+ + +T A + +D RGR + VSQSQ S T +PS K I S G S + + + AS N L E VA+ L++ R ++ Y DD S+ SS S++ +P + +V +LN S W++RK GL + + ++ L +E K L +IF MF + V FL L F+ + D L DWL+ L+ +LL + + S + ++QK L++ D++ F + +F+ D+T P +K+++ +L+Y++ + + PS N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD AT +L+ +L
Sbjct: 304 IQIYSSRELEDSMNKIREVLSDDKHDWEHRVAALKKVRSLLLAGATDHEGFLQQLRQLESAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKIMATSGIAAIRLIIRHTHYPRLIP-IMTSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLERHIAVLMETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQSHLKS--SDSIMSLPQSDRSSSSSQESLNRPLSAKAAVGNSSVTRTKVITSKVSSTPGSLQRSRSDVDVNAAASAKSRMPTVPAAAPFSSATALPPGSYASLDATPGYMEGRVRTRRQSSVNSAGGGVSVTDSRGRSRAKVVSQSQRSKSANPVGGKTYAGSRSSSPGKLGGHSYGRVPRATGSATPSEKRSKIPRSQGCSRETSPSRSGQDRFGLIHQARISASVNAMRILNTGMEVEAAVADALRRPMRRRYESPGMYSDDDANSDASSACSERSYSSRNGGVPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFITLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPSDF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL 1045 HSP 2 Score: 164.851 bits (416), Expect = 2.084e-40 Identity = 103/283 (36.40%), Postives = 165/283 (58.30%), Query Frame = 3
Query: 2730 YNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI-WSLLKLNNSQARLLEVYIKKG 3569
Y+ D V RD + + G +KI+ P + + P + +++ ++LKELS H++R EER+A L L+K+ R+++ W+EHFKT+L LLLETMGD + IRA +LRVL+E+ +SQ RF Y +LTI+K LEAHKD K V++AAEE + L S++ + C+K+L ++ + + L A+KM K+I+ ++S+ + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1196 YDKSALREAVFDDDVEQFRDGRRQDFGE-NKIMHP-------KSFSTGPTQNLELVGDLLKELSGHSERVEERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETMGDKD---------HTIRALALRVLKEILRSQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTA-DYPIDLAAIKMQTKVIERIPQDSLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKQHLGQLTGSKMKLLNLYIKRA 1460
BLAST of CLIP-associating protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003792.1 (pep scaffold:Pmarinus_7.0:GL477033:101956:230147:1 gene:ENSPMAG00000003427.1 transcript:ENSPMAT00000003792.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 172.17 bits (435), Expect = 2.505e-43 Identity = 133/382 (34.82%), Postives = 196/382 (51.31%), Query Frame = 3
Query: 210 EISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKEL---------------LSFKGDEIDSADVFKVPI-------TNAVKTTVKSVTSKPSNFT-GRTR----VNSAKSEN-----PSANSSTEYLYSKQ--QSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGAS 1247
+I S ++L ESL + L D DW+ RV L+ LR ++ A D F Q+++ LD +K DLRSQVVREACIT++ L+ +KNK D+ E + +L+NLV+N KIM+TSG VA++ I+ NT++ R++P LT TSKS ++R+ C E L L+ W LEK + + IKKGI DAD R ++R+A+ G FP E L +L+P+ QKALQ +L S + ++ K P+ T V + KS+T P+ + R+R VN+A S PS++++ L S+ Q FG AA P + A + GR+ R PS S + +S AS
Sbjct: 323 QIFSTRDLEESLAKVREVLADDKHDWEQRVTALKKLRSLVIAGATEYDCFFQHLRLLDAALKLSAKDLRSQVVREACITLSHLALVLKNKFDHTAESTLPTLLNLVANSAKIMATSGVVAIRIIIRNTHAPRLIP-LLTNNCTSKSVAVRRRCFEFLDLMLHEWQQNTLEKHIGLLVDTIKKGIHDADSDARMEARKAYWGLRGNFPAEAEALFAALEPSYQKALQSQLRGSSSVGSLPRSDHSTSSSQESLNRPASAKRPLSSPSANATGRVSGSSKSLTGVPATASLTRSRSDIDVNAAASAKSRATPPSSSAAPPGLASRSAAQPRFGAAAALPPGSYASL------GRV----------RSRRPSAGSAHSAHSATAS 687 HSP 2 Score: 140.584 bits (353), Expect = 1.233e-33 Identity = 99/311 (31.83%), Postives = 165/311 (53.05%), Query Frame = 3
Query: 2655 IDNGGSNVSSSLYPSTSNESN-VDNKYNPEYYSSGPID-TSVHSNRDAP-QNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHND--RHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWS-LLKLNNSQARLLEVYIKKG 3569
+DN S++ ++L P + S+ + YNP +Y+ I SVH + ++ G +S+ M+S+IL+EL+ D R EER+ L L+K+ RE+ DE FK +L LL+T+ D A +R +LRVL+E+ +++ F Y +LTI++ LEAHKDP K V++AAEE + L +++ + CL++L ++ T L A+KML ++++ + + V + L ++ ES VRK SV C+V +H VIG+ + L +L S+ +LL +YIK+
Sbjct: 1261 LDNKTSSLLNTLAPRPAGSSSRLVRDYNPLHYADTLIAIGSVHEDEAGQLRHGAGDMSEQCA------------------MVSDILRELAADADGSRGEERRTALLELLKLAREDALGTRDESFKAVLVTLLDTLKD---------ADYTVRTLALRVLREIVRNRPDPFKNYAELTIIRSLEAHKDPHKEVVRAAEETAMALATSIQPEQCLQVLCPIVQTAT-YPTNLAAIKMLTRVVERISHGDLLPLVPAVIPGLLQGYDNTESSVRKASVFCLVAVHSVIGDDLKPHLAQLTGSKIKLLNLYIKRA 1543 HSP 3 Score: 123.25 bits (308), Expect = 2.107e-28 Identity = 117/439 (26.65%), Postives = 206/439 (46.92%), Query Frame = 3
Query: 939 PITNAVKTTVKSVTSKPSNFTGRTRV-----NSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARI--------DTSDPRGRIQKVSQSQPSTRDPSPS----CKSG-----YITYSNGASDYKYTNNFQKKASPN------TYSSLRYKDAFETQVAEGLKKSRRNSHDH---YQSDDNTSETSSVISDQ------------LPSFNEVVVLLN---SKTWNDRKRGLNKAEK-YITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCI-LQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYL 2111
P + + + S P++ GRTR +KS NP S K S P ++ + + TS P + ++ +SQ +R+ SPS +SG + S G S + + P+ ++S + E VA+ L K RR + Y DD S+ SS S++ L +V LLN S W +RK GL + + ++ +L +E K L +IF MF + + + F + L+ + D LHDWLY L+ +LL + + S + ++Q+ L++ D++ F + +F+ D+T P +K+++ +L+Y++ + LQ+ ++++ L + I+ WT+E KS+D+RK + ++I LF+LN +F+ LL LP TFQ+ AT +L+ +L
Sbjct: 673 PSAGSAHSAHSATASSPADSRGRTRTKISQSQRSKSANPGGAGSRSGSPGKMLS------VAPGSSLSGVVQRVPLPAATSSP-AKHSRIPRSQGCSRETSPSRLSLARSGSSRIPRPSVSQGCSRDNSRDTSPVRGFPSLDRFSLSHSGRLLGNDIEAAVADALNKPRRRYEPYGSMYSDDDANSDASSACSERSYGSRNGSTSLYLRQMEDVAELLNRCASANWTERKEGLIGLQALFKSQRTLSRVELKRLCEIFTRMFADPPSKEV--FSSQLFKV---HFDELHDWLYLLLTQLLKKMGADLLGSVQTKVQRCLDVTRDSFQFDQQFNILMRFIVDQTQTPNLKVKVAVLKYIESLALQMDPADFVNSSETRLA--VSRIITWTSEPKSSDVRKAAQAVLIALFELNTPEFTMLLGSLPKTFQEGATKLLHNHL 1097
BLAST of CLIP-associating protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008085.1 (pep scaffold:Pmarinus_7.0:GL476334:564674:633296:-1 gene:ENSPMAG00000007261.1 transcript:ENSPMAT00000008085.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 152.91 bits (385), Expect = 1.377e-37 Identity = 88/229 (38.43%), Postives = 133/229 (58.08%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKE 887
++I S ++L +SL I L D DW+ R+ L+ LR ++ A D F Q+++ LD K DLRSQVVREACIT+ L+ +++K D+ E II +L NLV N ++++TSG A++ I+ +T+ R++P +T TSKS ++R+ C E L L+ W LE+ + + E IKKGI DAD + R ++R A+ FP E L +L + QKAL E
Sbjct: 25 VQIYSSRDLEDSLNIIRGTLSDDKHDWEKRIAALKKLRSLVIAGAPEYDCFFQHLRLLDSAFKLSAKDLRSQVVREACITLGHLATVLRSKFDHAAEAIIPTLFNLVPNCARVIATSGVAAIRLIIRHTHVPRLIP-LITGNCTSKSVAVRRRCYEFLNLLLHEWQSHILERHVAVLVETIKKGIPDADAEARVEARRAYWGLYSHFPAEAEALHATLAFSYQKALLSE 252 HSP 2 Score: 100.138 bits (248), Expect = 2.091e-21 Identity = 67/226 (29.65%), Postives = 118/226 (52.21%), Query Frame = 3
Query: 1464 NSKTWNDRKRGLNKAEKYITEASLKPL---ERKALIDIFNSMFLE-NQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKST-DLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQA 2126
+S W +RK GL + AS +PL E + L D F MF + + V FL L FV + H LH WLY L+ +LL + S + ++Q+ L++ D + F + K + D++ T K++L + Y++ + + N+ + + ++ W+ E KS+ + RK++ ++I LF+LN ++F+ LL LP TFQ+ AT +L+++L + A
Sbjct: 606 SSADW-ERKDGLRGLRALL--ASRRPLSQAELRRLCDTFTRMFADPHGKQVFCVFLDTLVDFVAQCHSELHHWLYVLLTQLLSRACASLLGSVQAKVQRGLDITRDCFPFDQQFNIIMKCIVDQSQ--TAKMKLATMRYLEGLARRMDSEHF-ANSSETRHAVSRVITWSTEAKSSSETRKVAQAVLIALFELNTAEFTMLLGALPRTFQEGATRLLHSHLHALGA 825 HSP 3 Score: 79.7221 bits (195), Expect = 4.548e-15 Identity = 68/231 (29.44%), Postives = 123/231 (53.25%), Query Frame = 3
Query: 2889 MSEILKELSNH---NDRHEER-KACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLK-LNNSQARLLEVYIKK 3566
+ +IL+ELS+ +R ER +A L L ++ + TD LL L + + D + +R +L VL+E+A ++ F + ++ +++ LEAH+DP K V+ AAEE + L S +P + CL++L + T L A+KM K+ + + + + + ++ L ++ E+ VRK SV C+V ++ VIG+ + L L++S+ +LL +YIK+
Sbjct: 994 LPDILRELSSGAEGGERQGERMRAALQDLWRLAHDGWLTDSGS--TPLLLTLTDAVADPD---------HTVRMLALHVLREMALNRPESFASHVEVAVIRTLEAHRDPHKEVVHAAEEAAAALASALPPEPCLRLLWPFVQTATYPG-NLAAIKMQTKVXGIRSLDVLLSLLPDVVPGLVQGYDNAETSVRKASVFCLVAIYTVIGDELTPHLALLSSSKMKLLNLYIKR 1212
BLAST of CLIP-associating protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006778.1 (pep scaffold:Pmarinus_7.0:GL479472:848:23794:-1 gene:ENSPMAG00000006089.1 transcript:ENSPMAT00000006778.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 140.584 bits (353), Expect = 3.713e-35 Identity = 83/225 (36.89%), Postives = 138/225 (61.33%), Query Frame = 3
Query: 210 EISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKAL 878
++ S +EL ES+ + + L D DW+ RV L+ LRG++ A D F +++ L+ K DLRSQVVREACIT+ + S + N+ D+ E ++ +L NLV N K+M+TSG A++ I+ +T++ R++P +T+ +SKS ++R+ C E + L+ + W + LE+ + +++ IKKG+ DAD RA++R+A+ F FP + L +L+P QK L
Sbjct: 251 QVHSSRELEESISGVRDVLCDDKNDWEQRVAALKKLRGLLLAGAAEQDSFPGHLRLLEPAFKLSAKDLRSQVVREACITLGYFSTVLGNRFDHCAETLMPTLFNLVPNSAKVMATSGVAAIRLIIRHTHTARLIP-LITSNCSSKSVAVRRRCFEFMDLLLQVWQISSLERHVTVLSDTIKKGMHDADADARAEARKAYWGFRSHFPSESDALYAALEPKYQKLL 474
BLAST of CLIP-associating protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006783.1 (pep scaffold:Pmarinus_7.0:GL479472:848:23794:-1 gene:ENSPMAG00000006089.1 transcript:ENSPMAT00000006783.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 139.813 bits (351), Expect = 6.121e-35 Identity = 83/225 (36.89%), Postives = 138/225 (61.33%), Query Frame = 3
Query: 210 EISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKAL 878
++ S +EL ES+ + + L D DW+ RV L+ LRG++ A D F +++ L+ K DLRSQVVREACIT+ + S + N+ D+ E ++ +L NLV N K+M+TSG A++ I+ +T++ R++P +T+ +SKS ++R+ C E + L+ + W + LE+ + +++ IKKG+ DAD RA++R+A+ F FP + L +L+P QK L
Sbjct: 248 QVHSSRELEESISGVRDVLCDDKNDWEQRVAALKKLRGLLLAGAAEQDSFPGHLRLLEPAFKLSAKDLRSQVVREACITLGYFSTVLGNRFDHCAETLMPTLFNLVPNSAKVMATSGVAAIRLIIRHTHTARLIP-LITSNCSSKSVAVRRRCFEFMDLLLQVWQISSLERHVTVLSDTIKKGMHDADADARAEARKAYWGFRSHFPSESDALYAALEPKYQKLL 471
BLAST of CLIP-associating protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002178.1 (pep scaffold:Pmarinus_7.0:GL493696:28:2121:1 gene:ENSPMAG00000001982.1 transcript:ENSPMAT00000002178.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 95.5153 bits (236), Expect = 8.664e-23 Identity = 55/157 (35.03%), Postives = 93/157 (59.24%), Query Frame = 3
Query: 3108 RVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLK-LNNSQARLLEVYIKKGGS 3575
R+ E + Q F +Y +LTI+KVLEAH+DP K V +AAEE + VL +++P + CLK+L ++ + + L A+KM ++++ ++ + ++ L ++ ES VRK SV C+V +H IGE + L L+ S+ +LL +YI++ S
Sbjct: 1 RLCFEFLRRQPTCFRKYAELTIMKVLEAHRDPHKEVCRAAEETASVLAASLPAEQCLKVLCPIVQTA-DFPINLAAIKMQTRVMQRLPHTALTQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIHTAIGESLTPYLTHLSGSKMKLLNLYIQRAES 156
BLAST of CLIP-associating protein 1 vs. Ensembl Nematostella
Match: EDO44820 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUW5]) HSP 1 Score: 128.642 bits (322), Expect = 1.926e-30 Identity = 74/229 (32.31%), Postives = 133/229 (58.08%), Query Frame = 3
Query: 2889 MSEILKELSN-HNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIW--SLLKLNNSQARLLEVYIKK 3566
++ IL LS+ +DR +E++ L L++M RE P W F + L+ ++ D + IR+ ++RVL+++ ++Q F + T+ KVL+AHKDP+K V++ AEE + + ++ + C+++L +I+D +E + L ALKML K+++ + +IE + +L L +H ES VRK SV +V LH ++GE + L +L+ ++ +LL +YIK+
Sbjct: 396 LAPILSPLSDPSSDRMDEKRGSLVDLLRMIREEIPALWAA-FPKVFSALIRSIDD---------VQPSIRSLAIRVLKDMVRAQPHTFHDVIGTTVSKVLQAHKDPQKEVVRLAEEAAATIARSVAPEDCMRVLGPIIND-SEFPVSLAALKMLTKVVEGVDSVTIEEHLPDLIPGLVKCYDHVESSVRKASVFSLVALHAIVGEEVLLPHLAELSGTKMKLLNLYIKR 613 HSP 2 Score: 123.25 bits (308), Expect = 1.063e-28 Identity = 67/226 (29.65%), Postives = 131/226 (57.96%), Query Frame = 3
Query: 1446 EVVVLL-NSKTWNDRKRGLNKAEKYITEAS-LKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSS 2117
E+V L N+ + DR+ G++ ++ + + +E + D +F + V FL L F+ + L+DWL+ L+ +LL + + S + +I ++L+++ D++ + F + +F+TD+T P +K+++ +L+Y++ ++ L PS TN+ + + I+ WT E KS D+RK S+ +++ LF+LN +FS +L +LP +FQD AT +L+++L S
Sbjct: 5 EIVRLCHNNNSSTDRRDGISGLLAFLKSSRVMSDVELSKIKDCLTRLFCDPNNKVYSAFLDALCEFIVVHKVDLNDWLFVLLSRLLIKLGTDILGSMQSKIVRVLDVIRDSFPYDLQFSILTRFITDQTQTPNLKVKIAVLQYLQGLISLMDPSDF-TNSGETRLAVSRIISWTTEPKSADVRKESAAVIVALFELNTPEFSMMLSVLPKSFQDGATKLLHSHLKS 229
BLAST of CLIP-associating protein 1 vs. Ensembl Medaka
Match: CLASP1 (H(+)/Cl(-) exchange transporter 4 [Source:NCBI gene;Acc:101155751]) HSP 1 Score: 263.077 bits (671), Expect = 5.798e-71 Identity = 203/712 (28.51%), Postives = 345/712 (48.46%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKP---SNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSD--------------PRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKK--------ASPNTYSSLRYKDAFETQVAEGLKKSRRN---SHDHYQSDDNTSETSSVISD----------------QLPSFNEVVVLLNSKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASK 2201
I+I S +E+ E+L I + L D DW+ RV L+ LR ++ A D FLQ ++ ++ K DLRSQVVREACIT+ + S + + D+ E ++ +L+NLV N K+M+TSG A++ I+ +T+ R++P + ++ + + ++ + +++ + + E IKKGI DAD + R+ +R+ + F+ F + E+L Q+L+ + QKALQ L S GD + S +P ++ ++ + ++P N G T+ + + P+ SS L+ + +S+ AA A R+ P G + + + TR S S S +T S G S K + Q + AS N L E VA+ L++ R S Y DD S+ SS S+ Q+ EV+ S W++RK GL + + ++ L +E K L +IF MF + + V FL L FV + D L DWL+ L+ +LL + + S + ++QK L++ +++ F + +F+ D+T P +K+++ +L Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD T +L+ +L RS TA P+NSA++
Sbjct: 280 IQIYSNREVEEALTKIRDVLSDDKRDWELRVAALKKLRSLLLAGAAEFDGFLQQLRLMEAAFKLSAKDLRSQVVREACITLGYFSLVLGGRFDHAAEAVMPTLLNLVPNSAKVMATSGVAAIRLILRHTHFPRLIPIITSNCTSKAVAVRSCVSPSVFLSVIDSSSRRHV----AVLMETIKKGIHDADAEARSVARKCYWGFHAHFSREAEQLFQALESSYQKALQAHLRS--GDSLMS-----LPASDRSSSSSQESLNRPLSVKNSVGSTKAVPS-TRKPATASSPGSLH-RSRSDVDVNAAASANARTRMSAVSSAVPSSPFSSASALPPGSYASLGRVR--TRRTS-SGNSPSLTDSRGRSRGKVVSQSQHRLSHQARISASVNAMRILNTGTEVEAAVADALRRPARRRFESPGMYSDDDANSDASSACSERSYSSRNGGVTPHYMRQMEDVAEVLNHCASANWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVVLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPADF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNHL------RSASTA--------VAAPSNSATR 960 HSP 2 Score: 149.058 bits (375), Expect = 1.282e-35 Identity = 99/284 (34.86%), Postives = 153/284 (53.87%), Query Frame = 3
Query: 2730 YNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRH---EERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
YNP Y+ GP GS+ K G + R +++ ++LKELS EER+ L L+K+ RE+ WDEHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L ++ + + L A+KM + I+ ++E + + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1073 YNPGNYTDGP----------------GSLDKAALYEDGGEPRRDACPTEQLELVGQLLKELSQGQGGEKGPEERRGTLLELLKVAREDALMVWDEHFKTMLLLLLETLGDKD---------HTIRALALRVLKEILRNQPARFKNYAELTIMKALEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTA-DYPINLAAIKMQTRAIERISKEPLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRA 1330
BLAST of CLIP-associating protein 1 vs. Ensembl Medaka
Match: CLASP1 (H(+)/Cl(-) exchange transporter 4 [Source:NCBI gene;Acc:101155751]) HSP 1 Score: 254.603 bits (649), Expect = 3.800e-68 Identity = 221/808 (27.35%), Postives = 360/808 (44.55%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPI----------TNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNF-----------GWRAAKPKTATARIDT------SDPRGRIQK--VSQSQPSTRDPSP----SCKSGYI-----------TYSNGASDY--------------------------KYTNNFQKKASPNTYSSLRYKDAFETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISD----------------QLPSFNEVVVLLNSKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKI--------------------------------SSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASK 2201
I+I S +E+ E+L I + L D DW+ RV L+ LR ++ A D FLQ ++ ++ K DLRSQVVREACIT+ + S + + D+ E ++ +L+NLV N K+M+TSG A++ I+ +T+ R++P +T+ TSK+ ++R+ C E + L+ W LE+ + + E IKKGI DAD + R+ +R+ + F+ F + E+L Q+L+ + QKALQ L S GD + S + P+ + AV +T K T+ R+R + + SAN+ T G A+ + T R + +D RGR + VSQSQP +R SP + G I T ++ +S Y + ++ + AS N L E VA+ L + R S Y DD S+ SS S+ Q+ EV+ S W++RK GL + + ++ L +E K L +IF MF + + V FL L FV + D L DWL+ L+ +LL + + S + ++QK L++ +++ F + +F+ D+T P +K+++ +L Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD T +L+ +L RS TA P+NSA++
Sbjct: 308 IQIYSNREVEEALTKIRDVLSDDKRDWELRVAALKKLRSLLLAGAAEFDGFLQQLRLMEAAFKLSAKDLRSQVVREACITLGYFSLVLGGRFDHAAEAVMPTLLNLVPNSAKVMATSGVAAIRLILRHTHFPRLIP-IITSNCTSKAVAVRRRCFEFVDLLLHEWQASSLERHVAVLMETIKKGIHDADAEARSVARKCYWGFHAHFSREAEQLFQALESSYQKALQAHLRS--GDSLMSLPASDRSSSSSQESLNRPLSVKNSVGSSRSKAVPSTRKPATASSPGSLHRSRSDVDVNAAASANARTRMSAVSSAVPSSPFSSASALPPGSYASLGRVRTRRTSSGNSPSLTDSRGRSRGKVVSQSQPGSRSGSPGRLLTSTYGRIPRPTMGAPSPQTPTSISSSYSEKNRPRGHRSQGCSRDNSPTRSGADRLSHQARISASVNAMRILNTGTEVEAAVADALLLGDSRSKRRPARRRFESPGMYSDDDANSDASSACSERSYSSRNGGVTPHYMRQMEDVAEVLNHCASANWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVVLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPADF-VNSSETRLAVSRIITWTTEPKSSDVRKTLQSWAGEEPSGRAGTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNHL------RSASTAV------AMAAPSNSATR 1099 HSP 2 Score: 149.828 bits (377), Expect = 8.372e-36 Identity = 104/294 (35.37%), Postives = 161/294 (54.76%), Query Frame = 3
Query: 2730 YNPEYYSSGP--IDTSV------HSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRH---EERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
YNP Y+ GP +D + RDA + +KIL P + P E +++ ++LKELS EER+ L L+K+ RE+ WDEHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L ++ + + L A+KM + I+ ++E + + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1217 YNPGNYTDGPGSLDKAALYEDGGEPRRDARRQECVE-NKILNP-------KSFPACPTEQLELVGQLLKELSQGQGGEKGPEERRGTLLELLKVAREDALMVWDEHFKTMLLLLLETLGDKD---------HTIRALALRVLKEILRNQPARFKNYAELTIMKALEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQT-ADYPINLAAIKMQTRAIERISKEPLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRA 1492
BLAST of CLIP-associating protein 1 vs. Ensembl Medaka
Match: clasp2 (cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:101157230]) HSP 1 Score: 173.711 bits (439), Expect = 3.220e-43 Identity = 92/208 (44.23%), Postives = 133/208 (63.94%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI 3506
++++E+LKELSNHN+R EERKA L+ L+K+ RENT WDEHFKT+L LLLETMGD E IR +LRVL+E+ Q RF Y +LTI+K LEAHKDP K V++AAEE + +L ++ + C+K+L +I + + L A+KM K+++ RE + + + + L ++ ES VRK V C+V ++ VIGE +
Sbjct: 1025 ELVAELLKELSNHNERIEERKAALWELLKLIRENTLQVWDEHFKTILLLLLETMGDRE---------HVIRTLALRVLREILGKQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPEQCIKVLCPIIQSA-DYPINLAAIKMQTKVVERIPREGLISMLPEIVPGLVQGYDNSESSVRKACVFCLVAIYAVIGEDL 1222 HSP 2 Score: 148.673 bits (374), Expect = 1.377e-35 Identity = 86/232 (37.07%), Postives = 134/232 (57.76%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLS 896
++I S ++L +L I D DW R + L+ +R ++ A D F Q+++ LD K DLRSQVVREACITVA LS + NK D+ E I+ L NL+ N K+M+ SG A++ I+ +T+ R++P +T+ TSKS ++R+ C + L L+ + W LE+ ++ + E+IKKGI D D + R ++R+A+ FP + L SL+ + Q+ LQ L S
Sbjct: 72 VQIYSARDLEGNLNKIREICSDDKHDWDQRANALKKIRSLLVAGAAGYDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSSVLGNKFDHGAEAIVPVLFNLIPNCAKVMAMSGVSAIRIIIRHTHVPRLIP-LITSNCTSKSVAVRRRCYDFLDLLLQEWQTHSLERHTAVLVESIKKGIHDPDSEARVEARKAYWGLRNHFPAEADALYNSLETSYQRTLQSYLKS 302 HSP 3 Score: 133.65 bits (335), Expect = 6.736e-31 Identity = 87/309 (28.16%), Postives = 157/309 (50.81%), Query Frame = 3
Query: 1326 ETQVAEGLKKSRRNSHDHY---QSDDNTSETSSVISDQ---------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTV--------------------VIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCI-LQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAV 2129
E +A+ LKK R +++Y DD S+ SS S++ +P++ +V +LN S W++RK GL + + + +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++Q+ L++ +++ + F + +F D+T P +K+++ +L+Y++ + LQ+ P ++++ L + I+ WT E KS+D+RK + ++I LF LN +F+ LL LP TFQD AT +L +L + +V
Sbjct: 572 EEALADALKKPARRRYENYGMYSDDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRDSGRVYGTAESGISSASFKVFSMFLETLVDFILVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEAPDFVNSSETRLA--VSRIITWTTEPKSSDVRKAAQAVLIALFQLNTPEFTMLLAALPKTFQDGATKLLQNHLKNTGSV 878
BLAST of CLIP-associating protein 1 vs. Ensembl Medaka
Match: clasp2 (cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:101157230]) HSP 1 Score: 172.94 bits (437), Expect = 7.086e-43 Identity = 92/208 (44.23%), Postives = 133/208 (63.94%), Query Frame = 3
Query: 2883 DMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGI 3506
++++E+LKELSNHN+R EERKA L+ L+K+ RENT WDEHFKT+L LLLETMGD E IR +LRVL+E+ Q RF Y +LTI+K LEAHKDP K V++AAEE + +L ++ + C+K+L +I + + L A+KM K+++ RE + + + + L ++ ES VRK V C+V ++ VIGE +
Sbjct: 1223 ELVAELLKELSNHNERIEERKAALWELLKLIRENTLQVWDEHFKTILLLLLETMGDRE---------HVIRTLALRVLREILGKQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPEQCIKVLCPIIQSA-DYPINLAAIKMQTKVVERIPREGLISMLPEIVPGLVQGYDNSESSVRKACVFCLVAIYAVIGEDL 1420 HSP 2 Score: 154.066 bits (388), Expect = 4.221e-37 Identity = 119/383 (31.07%), Postives = 194/383 (50.65%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTV-----KSVTSKPSNFTGR-----------TRVNSAKSE-NPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTS-------------DPRG--RIQKVSQSQPSTRDPSPS---CKSGYITYSNGA 1244
++I S ++L +L I D DW R + L+ +R ++ A D F Q+++ LD K DLRSQVVREACITVA LS + NK D+ E I+ L NL+ N K+M+ SG A++ I+ +T+ R++P +T+ TSKS ++R+ C + L L+ + W LE+ ++ + E+IKKGI D D + R ++R+A+ FP + L SL+ + Q+ LQ L S S V +P ++ ++ + ++SK S GR T + ++S+ + +A + ++ + Q G + A+ ++ R+ T D RG R + VSQSQP +R SP + T S+GA
Sbjct: 309 VQIYSARDLEGNLNKIREICSDDKHDWDQRANALKKIRSLLVAGAAGYDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSSVLGNKFDHGAEAIVPVLFNLIPNCAKVMAMSGVSAIRIIIRHTHVPRLIP-LITSNCTSKSVAVRRRCYDFLDLLLQEWQTHSLERHTAVLVESIKKGIHDPDSEARVEARKAYWGLRNHFPAEADALYNSLETSYQRTLQSYLKS-------SGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPASSKGGVSLTSLQRSRSDVDVNAAAVSKQRHVGQARVAGQQPARSYSSLGRVRTKQLLTTASSVSSQVDSRGRSRAKMVSQSQPGSRSGSPGRVLTTTALSTMSSGA 683 HSP 3 Score: 140.584 bits (353), Expect = 5.195e-33 Identity = 83/284 (29.23%), Postives = 151/284 (53.17%), Query Frame = 3
Query: 1353 KSRRNSHDHYQSDDNTSETSSVISDQ---------LPSF----NEVVVLLN---SKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCI-LQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETAS 2150
+ R ++ Y DD S+ SS S++ +P++ +V +LN S W++RK GL + + + +L +E K L +IF MF + + V FL L F+ + D L DWL+ L+ +LL + + S + ++Q+ L++ +++ + F + +F D+T P +K+++ +L+Y++ + LQ+ P ++++ L + I+ WT E KS+D+RK + ++I LF LN +F+ LL LP TFQD AT +L +L + +V S
Sbjct: 802 RRRYENYGMYSDDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFILVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEAPDFVNSSETRLA--VSRIITWTTEPKSSDVRKAAQAVLIALFQLNTPEFTMLLAALPKTFQDGATKLLQNHLKNTGSVAQAPMGS 1083
BLAST of CLIP-associating protein 1 vs. Ensembl Medaka
Match: CLASP1 (H(+)/Cl(-) exchange transporter 4 [Source:NCBI gene;Acc:101155751]) HSP 1 Score: 165.236 bits (417), Expect = 1.851e-40 Identity = 120/376 (31.91%), Postives = 189/376 (50.27%), Query Frame = 3
Query: 207 IEISSIKELRESLLNINNKLHAD--DWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDS-----------ADVFKVPI----------TNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNF-----------GWRAAKPKTATARIDT------SDPRGRIQK--VSQSQPSTRDPSPS 1208
I+I S +E+ E+L I + L D DW+ RV L+ LR ++ A D FLQ ++ ++ K DLRSQVVREACIT+ + S + + D+ E ++ +L+NLV N K+M+TSG A++ I+ +T+ R++P +T+ TSK+ ++R+ C E + L+ W LE+ + + E IKKGI DAD + R+ +R+ + F+ F + E+L Q+L+ + QKALQ L S GD + S + P+ + AV +T K T+ R+R + + SAN+ T G A+ + T R + +D RGR + VSQSQP +R SP
Sbjct: 308 IQIYSNREVEEALTKIRDVLSDDKRDWELRVAALKKLRSLLLAGAAEFDGFLQQLRLMEAAFKLSAKDLRSQVVREACITLGYFSLVLGGRFDHAAEAVMPTLLNLVPNSAKVMATSGVAAIRLILRHTHFPRLIP-IITSNCTSKAVAVRRRCFEFVDLLLHEWQASSLERHVAVLMETIKKGIHDADAEARSVARKCYWGFHAHFSREAEQLFQALESSYQKALQAHLRS--GDSLMSLPASDRSSSSSQESLNRPLSVKNSVGSSRSKAVPSTRKPATASSPGSLHRSRSDVDVNAAASANARTRMSAVSSAVPSSPFSSASALPPGSYASLGRVRTRRTSSGNSPSLTDSRGRSRGKVVSQSQPGSRSGSPG 680 HSP 2 Score: 150.214 bits (378), Expect = 7.287e-36 Identity = 104/294 (35.37%), Postives = 161/294 (54.76%), Query Frame = 3
Query: 2730 YNPEYYSSGP--IDTSV------HSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPE--DMMSEILKELSNHNDRH---EERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLL-KLNNSQARLLEVYIKKG 3569
YNP Y+ GP +D + RDA + +KIL P + P E +++ ++LKELS EER+ L L+K+ RE+ WDEHFKT+L LLLET+GD + IRA +LRVL+E+ ++Q RF Y +LTI+K LEAHKD K V++AAEE + L ++ + C+K+L ++ + + L A+KM + I+ ++E + + ++ L ++ ES VRK SV C+V ++ VIGE + L +L S+ +LL +YIK+
Sbjct: 1279 YNPGNYTDGPGSLDKAALYEDGGEPRRDARRQECVE-NKILNP-------KSFPACPTEQLELVGQLLKELSQGQGGEKGPEERRGTLLELLKVAREDALMVWDEHFKTMLLLLLETLGDKD---------HTIRALALRVLKEILRNQPARFKNYAELTIMKALEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTA-DYPINLAAIKMQTRAIERISKEPLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRA 1554 HSP 3 Score: 136.346 bits (342), Expect = 1.263e-31 Identity = 118/448 (26.34%), Postives = 199/448 (44.42%), Query Frame = 3
Query: 1002 GRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQP--------STRDPSP------------SCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGL-----------KKSRRNSHDHYQSDDNTSETSSVISD----------------QLPSFNEVVVLLNSKTWNDRKRGLNKAEKYI-TEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASK 2201
GR + + +P +S YS++ G R+ + + R RI + S SQ S+RD SP S + ++ + SD + ++ + AS N L E VA+ L + R S Y DD S+ SS S+ Q+ EV+ S W++RK GL + + ++ L +E K L +IF MF + + V FL L FV + D L DWL+ L+ +LL + + S + ++QK L++ +++ F + +F+ D+T P +K+++ +L Y++ + + P+ N+ + + I+ WT E KS+D+RK + ++I LF+LN +F+ LL LP TFQD T +L+ +L RS TA P+NSA++
Sbjct: 688 GRIPRPTMGAPSPQTPTSISSSYSEKNRPRGHRSQGCSRDNSPTRSGAARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLVSRRHSRSTSALSSAECCSD-RLSHQARISASVNAMRILNTGTEVEAAVADALLLGDSRSKRRPARRRFESPGMYSDDDANSDASSACSERSYSSRNGGVTPHYMRQMEDVAEVLNHCASANWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVVLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPADF-VNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNHL------RSASTAV------AMAAPSNSATR 1121
BLAST of CLIP-associating protein 1 vs. Planmine SMEST
Match: SMESG000072426.1 (SMESG000072426.1) HSP 1 Score: 2184.84 bits (5660), Expect = 0.000e+0 Identity = 1127/1147 (98.26%), Postives = 1127/1147 (98.26%), Query Frame = 3
Query: 135 MNKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 3575
MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSA KPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHTKTTKVYNTKKTASNTTYSSHNSNMSSVSFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS
Sbjct: 1 MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSA--------------------KPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHTKTTKVYNTKKTASNTTYSSHNSNMSSVSFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 1127
BLAST of CLIP-associating protein 1 vs. Planmine SMEST
Match: SMESG000072426.1 (SMESG000072426.1) HSP 1 Score: 2172.51 bits (5628), Expect = 0.000e+0 Identity = 1095/1147 (95.47%), Postives = 1095/1147 (95.47%), Query Frame = 3
Query: 135 MNKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 3575
MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCR TPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS
Sbjct: 1 MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCR----------------------------------------------------TPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 1095
BLAST of CLIP-associating protein 1 vs. Planmine SMEST
Match: SMESG000072426.1 (SMESG000072426.1) HSP 1 Score: 2093.16 bits (5422), Expect = 0.000e+0 Identity = 1066/1147 (92.94%), Postives = 1066/1147 (92.94%), Query Frame = 3
Query: 135 MNKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 3575
MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSA KPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCR TPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNE SEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS
Sbjct: 1 MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSA--------------------KPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCR----------------------------------------------------TPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNE---------SEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 1066
BLAST of CLIP-associating protein 1 vs. Planmine SMEST
Match: SMESG000072426.1 (SMESG000072426.1) HSP 1 Score: 2066.58 bits (5353), Expect = 0.000e+0 Identity = 1055/1147 (91.98%), Postives = 1055/1147 (91.98%), Query Frame = 3
Query: 135 MNKKQEFGAVXXXXXXXXXXXXXXIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 3575
MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSA KPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCR TPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNI ELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS
Sbjct: 1 MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQHRVDNLRILRGIIKANRFPTDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLTTISTSKSTSLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSFKGDEIDSADVFKVPITNAVKTTVKSVTSKPSNFTGRTRVNSAKSENPSA--------------------KPKTATARIDTSDPRGRIQKVSQSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFETQVAEGLKKSRRNSHDHYQSDDNTSETSSVISDQLPSFNEVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCR----------------------------------------------------TPKQKIEPEKSSEFIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLNNYSPANNYSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSNESNVDNKYNPEYYSSGPIDTSVHSNRDAPQNNI--------------------ELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLKLNNSQARLLEVYIKKGGS 1055
BLAST of CLIP-associating protein 1 vs. Planmine SMEST
Match: SMESG000016277.1 (SMESG000016277.1) HSP 1 Score: 426.402 bits (1095), Expect = 1.797e-127 Identity = 364/1204 (30.23%), Postives = 612/1204 (50.83%), Query Frame = 3
Query: 210 EISSIKELRESLLNINNKL--HADDWQHRVDNLRILRGIIKANRFP-TDDFLQNIKFLDLEIKNCVSDLRSQVVREACITVAFLSKEIKNKLDYFLEQIIESLMNLVSNGVKIMSTSGKVALKYIVYNTNSVRILPFFLXXXXXXXXXXLRQFCSELLKLICENWNMKYLEKSSSNIAEAIKKGISDADEQTRAQSREAFCWFNGKFPKLGEKLLQSLDPTKQKALQKELLSF--KGDEIDSADVFKVPITNAVKTTVKSVTSKPSN---------------FTGRTRVNSAKSENPSANSSTEYLYSKQQSNFGWRAAKPKTATARIDTSDPRGRIQKVS-QSQPSTRDPSPSCKSGYITYSNGASDYKYTNNFQKKASPNTYSSLRYKDAFE-----------TQVAEGLKKSRRNSHD-----------HYQSDDNTSETSSVISDQL---------PSFN--EVVVLLNSKTWNDRKRGLNKAEKYITEASLKPLERKALIDIFNSMFLENQTVVIKRFLTVLYAFVDRYHDHLHDWLYSLIIKLLGLQANERVKSSKMEIQKILNLLIDNYGTIVMFMLCCKFVTDKTNEPTIKIRLCLLEYMKCILQLSQPSLLDTNNPDLGPMLGNILVWTAETKSTDLRKISSNIVIKLFDLNASQFSRLLKLLPNTFQDRATSILNAYLSSQQAVRSTETASDVGDCRVTVKPTNSASKFNRSNSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHKRTPKQKIEPEKSSE----------FIKINTEALQNLSLNCDNFDKTSVLSNSSNKSGTTPGSHWGSYQKGASSNPFYQTKTSQIPTPRQNLN----NYSPANN--YSYDNTNMQKFLSSQNSHPELSIDNGGSNVSSSLYPSTSN-ESNVDNKYN----PEYYSSG----PID--TSVHSNRDAPQNNIGSISKILKPVIGYQTLRKIAELPPEDMMSEILKELSNHNDRHEERKACLFRLIKMFRENTPTDWDEHFKTLLFLLLETMGDNEIDIENNNAKSEIRAQSLRVLQELAKSQAPRFLEYTQLTILKVLEAHKDPEKSVIKAAEECSRVLTSTMPRKVCLKMLIDVISDGTENQLCLPALKMLIKLIKNSNRESIEADVNNLCQALSIVVNHKESQVRKESVLCMVELHKVIGEGIWSLLK-LNNSQARLLEVYIKKGGS 3575
E+ + +EL+E + I + L +++DW+ RV L+ L+ + ++ F ++F+ ++ L + +++C+SDLRSQVVREAC+ VA+L+ +K + + + + SL++L+ N +IM+TSG L IV N +S ++L +++ SKS S R+F S+LL+ IC +W+ LEK N+ A++KG++DAD++ RA SR AF F FP+ K+L +D ++ L+KE LSF G + K TN TT+K TS N TG++R N + + ++ + S+ RAA +++ R S G K S ++ P + S S + IT +NG+ +T N ++YSS RYK + T +GL N D SDDN SETSS+ S ++ PS N E++ L+S W+++K GL + + L L+ K I++ N++F + ++ + FL + ++ + +L DWLY L++ L+ QA E + S + IQ+ LN + + + CC+ V D +K +L ++ + K ++ ++ ++++ + L P + I+ W E+K ++RKIS+ +++KL +L+ + LP + + I+N + +T++D GD +K SK RSNSFH K + + Y + ++ + K +++P S +I+ NTE LQ L++ + +D T N+ SY + N +T+ S P P N N N +N SY Q L + N +P I N + S P N + VDN P Y +SG P++ S S++ + N + + +G+Q L+KI+ LPP DM+ IL EL N R E+RKACL +L+ + REN +W+E FKT+L LL+T+ D + EIR SLRVLQEL K+ RF ++T LT+LK+L +HKD +K+V++AAEECS+V+ + + +C+K+L +V++D + ++ L ALKML++++KN + + + ++ L H+ES +RK S+ C+VE+++ IGE IW+ L+ L++S+ RLL +YI+K S
Sbjct: 43 EVGNSRELQEVIGEIISGLKGNSEDWEKRVKALKTLQSV--SSSFSNMEEFISYLRQLQVPLQSCLSDLRSQVVREACLAVAYLTHILKIRAEVLTDAFMPSLISLIPNSARIMATSGMTCLSIIVTNIHSAKVL-IHVSSAMNSKSNSTRRFASKLLETICSSWDPTVLEKQLPNLQNALEKGMADADQEARAISRSAFIGFVLNFPQEANKMLVLMDSGRRSLLEKE-LSFHPAGQVLAQFSNAKQRATNP-PTTLKLGTSSYGNRSVKKSSVSDSGDELITGKSRTNYSSLTRSKIKTQSDRGQNIMTSSVS-RAA--ESSNIRGSNSSLTGYTYKSSARTTPQSTRRSSSGTAPVITVNNGSV---HTKN-------DSYSSYRYKTSGSVSASLPRRKNLTSTGKGLYSGFENGVDPPNSGLLSRRRMDSSDDNGSETSSIESSEVSRSSLRAIKPSENTQEILRQLSSVHWSEKKDGLINFQNLLQSRKLNTLDLKKYIEVLNTLFNDTKSKIFPLFLICIQQLIENHKQYLFDWLYPLLLNLISKQAAETLASRQKPIQETLNTIRSQFPLEIQVRDCCRVVIDSYQNTGMKFKLSIMAFFKTVVIVAPSTVMEQSLASLTPTVNIIVEWIFESKWQEIRKISNALLLKLHNLHPQVMEAISNCLPPVTRQK---IMNLF----------KTSAD-GDLNSRLK---MRSKILRSNSFH---DKNTENPGSKALDHYGYYGHSVKPRDVYTNRNKSQLKPTSGSANSMTQEDIDNYIRRNTEDLQALAVAYERYDGT-----DGNR----------SYSRTRPYNSQLRTQLSDPPYPDGNANGNHINQGMVSNSAASYMINRFQSSLRNTN-YPPSGISNSSDMLQDSFSPHNRNLLAGVDNSLAYSCYPNYDASGYNYYPVNDAASTLSDQMLMKMNTSDVYLQSQCPMGFQMLQKISTLPPNDMIVTILAELCYLNQRTEQRKACLMKLMNLVRENAVENWNEVFKTILMRLLDTVKDTD---------PEIRTLSLRVLQELTKTMPQRFDDFTHLTVLKILHSHKDSDKTVVRAAEECSQVMARCLSQNLCMKVLSEVLNDN-DCRVNLGALKMLLEVLKNVPESLLLSSLESMVPGLIRTSEHEESHIRKASIFCLVEINRKIGETIWTYLQSLSSSKTRLLRLYIEKNNS 1182 The following BLAST results are available for this feature:
BLAST of CLIP-associating protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of CLIP-associating protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of CLIP-associating protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of CLIP-associating protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of CLIP-associating protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of CLIP-associating protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of CLIP-associating protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30033412 ID=SMED30033412|Name=CLIP-associating protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=4314bpback to top protein sequence of SMED30033412-orf-1 >SMED30033412-orf-1 ID=SMED30033412-orf-1|Name=SMED30033412-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1148bp MNKKQEFGAVTEEDFEQTFEQTPEIEISSIKELRESLLNINNKLHADDWQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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