40S ribosomal protein S29
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30033336 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12
Homology
BLAST of 40S ribosomal protein S29 vs. Ensembl Human
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 79.337 bits (194), Expect = 2.912e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Human
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 79.337 bits (194), Expect = 2.912e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Human
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 78.1814 bits (191), Expect = 1.057e-18 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Human
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 78.5666 bits (192), Expect = 1.222e-18 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Human
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 74.3294 bits (181), Expect = 1.883e-17 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 2 Query: 143 SHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 2 SHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 44
BLAST of 40S ribosomal protein S29 vs. Ensembl Celegans
Match: rps-29 (Ribosomal Protein, Small subunit [Source:UniProtKB/TrEMBL;Acc:P90983]) HSP 1 Score: 75.485 bits (184), Expect = 3.289e-18 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M N+W SHP+ +G GSR CRVC+ HGL+RKYGL++CRRCFRE A IG Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Fly
Match: RpS29 (gene:FBgn0261599 transcript:FBtr0082136) HSP 1 Score: 80.8777 bits (198), Expect = 2.934e-20 Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M A +W+SHP+ YGQGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Fly
Match: RpS29 (gene:FBgn0261599 transcript:FBtr0334681) HSP 1 Score: 80.8777 bits (198), Expect = 2.934e-20 Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M A +W+SHP+ YGQGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Zebrafish
Match: rps29 (ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]) HSP 1 Score: 80.4925 bits (197), Expect = 6.718e-20 Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ YGQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKYGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Xenopus
Match: rps29 (ribosomal protein S29 [Source:NCBI gene;Acc:549520]) HSP 1 Score: 79.337 bits (194), Expect = 2.639e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Mouse
Match: Rps29 (ribosomal protein S29 [Source:MGI Symbol;Acc:MGI:107681]) HSP 1 Score: 79.337 bits (194), Expect = 1.999e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. UniProt/SwissProt
Match: sp|Q6F473|RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella OX=51655 GN=RpS29 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.211e-21 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+W+SHP+ YGQGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIG 51
BLAST of 40S ribosomal protein S29 vs. UniProt/SwissProt
Match: sp|Q8WQI3|RS29_SPOFR (40S ribosomal protein S29 OS=Spodoptera frugiperda OX=7108 GN=RpS29 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.941e-21 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+W+SHP+ YGQGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIG 51
BLAST of 40S ribosomal protein S29 vs. UniProt/SwissProt
Match: sp|Q5UAL3|RS29_BOMMO (40S ribosomal protein S29 OS=Bombyx mori OX=7091 GN=RpS29 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.615e-21 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+W+SHP+ YGQGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIG 51
BLAST of 40S ribosomal protein S29 vs. UniProt/SwissProt
Match: sp|Q4LAY1|RS29_SCALT (40S ribosomal protein S29 OS=Scarabaeus laticollis OX=292456 GN=RpS29 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.574e-21 Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H N+W+SHP+ YGQGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIG 51
BLAST of 40S ribosomal protein S29 vs. UniProt/SwissProt
Match: sp|Q5MGJ4|RS29_LONON (40S ribosomal protein S29 OS=Lonomia obliqua OX=304329 GN=RpS29 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.246e-20 Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+W+SHP+ Y QGSR CR CSNRHGL+RKYGLN+CR+CFRE A IG Sbjct: 1 MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIG 51
BLAST of 40S ribosomal protein S29 vs. TrEMBL
Match: Q5BTL1 (Ribosomal protein S29 OS=Schistosoma japonicum OX=6182 GN=rps29 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.344e-21 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+WHSHPKNYGQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A +IG Sbjct: 1 MGHANIWHSHPKNYGQGSRCCRVCSNRHGLIRKYGLNMCRQCFRQYASVIG 51
BLAST of 40S ribosomal protein S29 vs. TrEMBL
Match: A0A4V3SF80 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_004799 PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.559e-21 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+WHSHPK+YGQGSR CRVCSNRHGL+RKYGLNMCR+CFR A +IG Sbjct: 1 MGHANIWHSHPKDYGQGSRHCRVCSNRHGLIRKYGLNMCRQCFRMYANVIG 51
BLAST of 40S ribosomal protein S29 vs. TrEMBL
Match: G7YKF2 (Small subunit ribosomal protein S29e OS=Clonorchis sinensis OX=79923 GN=CLF_110211 PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.559e-21 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+WHSHPK+YGQGSR CRVCSNRHGL+RKYGLNMCR+CFR A +IG Sbjct: 1 MGHANIWHSHPKDYGQGSRHCRVCSNRHGLIRKYGLNMCRQCFRMYANVIG 51
BLAST of 40S ribosomal protein S29 vs. TrEMBL
Match: A0A5J4NRT6 (Small subunit ribosomal protein S29e OS=Paragonimus westermani OX=34504 GN=DEA37_0003138 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.682e-20 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H N+WHSHPKNYGQGSR CRVCSNRHGL+RKYGLNMCR+CFR A +IG Sbjct: 1 MGHDNIWHSHPKNYGQGSRLCRVCSNRHGLIRKYGLNMCRQCFRMYANVIG 51
BLAST of 40S ribosomal protein S29 vs. TrEMBL
Match: A0A183WK39 (Uncharacterized protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS12492 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.756e-20 Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M HAN+WHSHPKNYGQGSR CRVC+NRHGL+RKYGL+MCR+CFR+ A +IG Sbjct: 1 MGHANIWHSHPKNYGQGSRCCRVCANRHGLIRKYGLHMCRQCFRQYASVIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Cavefish
Match: ENSAMXT00000021180.2 (pep primary_assembly:Astyanax_mexicanus-2.0:3:43360527:43362955:1 gene:ENSAMXG00000020569.2 transcript:ENSAMXT00000021180.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.9518 bits (193), Expect = 2.526e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Cavefish
Match: ENSAMXT00000053049.1 (pep primary_assembly:Astyanax_mexicanus-2.0:3:43359275:43362955:1 gene:ENSAMXG00000020569.2 transcript:ENSAMXT00000053049.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.8398 bits (133), Expect = 1.126e-10 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 2 Query: 152 KNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 +N +G + RVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 12 ENSEKGHLEDRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Yeast
Match: RPS29A (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29A has a paralog, RPS29B, that arose from the whole genome duplication [Source:SGD;Acc:S000004380]) HSP 1 Score: 80.8777 bits (198), Expect = 4.374e-21 Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H NVW SHP+ YG+GSRQCRVCS+ GL+RKYGLN+CR+CFRE A IG Sbjct: 1 MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Yeast
Match: RPS29B (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication [Source:SGD;Acc:S000002219]) HSP 1 Score: 78.1814 bits (191), Expect = 5.606e-20 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H NVW SHP+ +G+GSRQCRVCS+ GLVRKY LN+CR+CFRE A IG Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Nematostella
Match: EDO42174 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S249]) HSP 1 Score: 83.1889 bits (204), Expect = 1.999e-21 Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H+NVW SHP++YG GSR CRVCSN HGL+RKYGLN+CRRCFR+ A+ IG Sbjct: 1 MGHSNVWFSHPRSYGPGSRSCRVCSNHHGLIRKYGLNICRRCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Medaka
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 80.1073 bits (196), Expect = 1.147e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51
BLAST of 40S ribosomal protein S29 vs. Ensembl Medaka
Match: RPS29 (ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]) HSP 1 Score: 79.337 bits (194), Expect = 1.594e-19 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 119 MPHANVWHSHPKNYGQGSRQCRVCSNRHGLVRKYGLNMCRRCFRENAEMIG 271 M H ++ SHP+ +GQGSR CRVCSNRHGL+RKYGLNMCR+CFR+ A+ IG Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG 51 The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S29 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of 40S ribosomal protein S29 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of 40S ribosomal protein S29 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of 40S ribosomal protein S29 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of 40S ribosomal protein S29 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of 40S ribosomal protein S29 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of 40S ribosomal protein S29 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of 40S ribosomal protein S29 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of 40S ribosomal protein S29 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of 40S ribosomal protein S29 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of 40S ribosomal protein S29 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of 40S ribosomal protein S29 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of 40S ribosomal protein S29 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of 40S ribosomal protein S29 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 0
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30033336 ID=SMED30033336|Name=40S ribosomal protein S29|organism=Schmidtea mediterranea sexual|type=transcript|length=645bpback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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