Proteasome subunit beta

Overview
NameProteasome subunit beta
Smed IDSMED30033173
Length (bp)782
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Proteasome subunit beta (SMED30033173) t-SNE clustered cells

Violin plots show distribution of expression levels for Proteasome subunit beta (SMED30033173) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Proteasome subunit beta (SMED30033173) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Proteasome subunit beta (SMED30033173) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30033173

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
posterior sideSMED30033173h1SMcG0017241 dd_Smed_v4_1241_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior muscle cellSMED30033173h1SMcG0017241 dd_Smed_v4_1241_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB3 (proteasome 20S subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540])

HSP 1 Score: 279.256 bits (713), Expect = 5.061e-95
Identity = 126/205 (61.46%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC EQMYGMCE+LWE NMD   LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB3 (proteasome 20S subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540])

HSP 1 Score: 279.256 bits (713), Expect = 5.061e-95
Identity = 126/205 (61.46%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC EQMYGMCE+LWE NMD   LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB3 (proteasome 20S subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540])

HSP 1 Score: 199.904 bits (507), Expect = 1.083e-64
Identity = 90/145 (62.07%), Postives = 115/145 (79.31%), Query Frame = 3 
Query:   78 LSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYG 512
            +SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC EQMYG
Sbjct:    1 MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYG 145
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB3 (proteasome 20S subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540])

HSP 1 Score: 199.904 bits (507), Expect = 1.083e-64
Identity = 90/145 (62.07%), Postives = 115/145 (79.31%), Query Frame = 3 
Query:   78 LSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYG 512
            +SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC EQMYG
Sbjct:    1 MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYG 145
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB3 (proteasome 20S subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540])

HSP 1 Score: 133.65 bits (335), Expect = 2.904e-39
Identity = 61/99 (61.62%), Postives = 78/99 (78.79%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKR 365
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKR
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR 99
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-3 (Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237])

HSP 1 Score: 220.705 bits (561), Expect = 2.003e-72
Identity = 101/205 (49.27%), Postives = 139/205 (67.80%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SY G  V+AM G +CV IA+DLR G Q+ TI+TD  KV +   +++VG  G  +D  TV EK+ F+KNLYEL EN+ ++P+ LS M+SNL Y+ RFG +F EP++AG+D  T + +I  MD IGC     DF+  GT  E + G+CE  W ENM   +LFE  +Q++LS L+RD +SGWG  VY + KD+V +S +K RMD
Sbjct:    1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTITKDKVNVSTIKARMD 204
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-1 (Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:Q966I8])

HSP 1 Score: 50.0618 bits (118), Expect = 4.270e-7
Identity = 45/186 (24.19%), Postives = 77/186 (41.40%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEK 644
             G+ +IAM+    V + TD R        S   +K+T     + V   G A D   +A+   +  ++Y + ENK +     S +    LY  R        ++AG D   G         IG  +       SG+ +  + G  ++ W  N+  ++    + QA+  +  RD SSG  VR+ ++ K
Sbjct:   25 TGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR-EQLSASVLVAGWDEELGGQVYA--IPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVRLAVINK 207
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta3 (gene:FBgn0026380 transcript:FBtr0082010)

HSP 1 Score: 274.633 bits (701), Expect = 1.311e-93
Identity = 124/205 (60.49%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSIL+YNG  V+AM+GKDCVAIATD RFGIQ QTISTDF KV   G R+F+G  GL TD  TV ++L F+KNLYE  EN++M PK  S M+S+ LYE RFGP+F+EPV+AG+DP T E FI  MDLIGC    +DF+V+GTC EQ+YGMCETLW+ +++  QLFE I+Q+++++ DRD  SGWG  VY++EKD++T   +KTRMD
Sbjct:    1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKITERTLKTRMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta6 (gene:FBgn0002284 transcript:FBtr0075360)

HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-13
Identity = 49/210 (23.33%), Postives = 92/210 (43.81%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCET-LWEENMD----------SKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            NG +++A+ G D   IA D R        S   SK+ +   +  +G  G   D  ++   +  +   YE    + M  + ++ MLS  +Y +RF P++V  ++AGID   G+  +   D IG   E   +   GT    +  + +  +  +NM+           ++     S   +S+ +RD  +G  V + ++ KD + +  +  R D
Sbjct:   28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDN-EGKGVVYSYDPIG-HCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb3 (proteasome 20S subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682])

HSP 1 Score: 275.404 bits (703), Expect = 9.338e-94
Identity = 122/205 (59.51%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AM+GK+CVAIA+D RFGIQ Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++P+T   M+SNLLYE+RFGP+++EPVIAG+DP T E FI  +DLIGC M + DF+VSGTC+EQMYGMCE+LWE +M  + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb1 (proteasome 20S subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2])

HSP 1 Score: 69.3218 bits (168), Expect = 1.109e-13
Identity = 49/213 (23.00%), Postives = 100/213 (46.95%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCET-LWEENMDS--------KQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S  ++NG  V+A+ G+D   +A+D R        S D  K  +      +G  G   D  T+ + +  +  +Y+ + NK M    ++ MLS +LY +RF P++V  +I G+D   G   +   D +G   + + +   G+ +  +  + +  +  +NM++        ++  + +    +S+ +RD  +G  ++V +V K+ +    V  R D
Sbjct:   27 SPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSFDPVG-SYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEHVPLTQEKAVQLVKDVFISAAERDVYTGDALKVCIVSKEGIKEEIVPLRKD 237
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb9a (proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140])

HSP 1 Score: 50.8322 bits (120), Expect = 3.201e-7
Identity = 37/186 (19.89%), Postives = 83/186 (44.62%), Query Frame = 3 
Query:   90 GSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKD 647
            G+ +IA+     V I +D R       ++   +K++    +++    G A D  T+AE + +Q +++ +         + + ++ N+ Y+ +        ++AG D   G      +  +   +    F + G+ +  + G  +  +++NM  ++  E +  AL  ++ RD SSG    V  ++KD
Sbjct:   19 GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEIVNYQLDVHSIEVEDDPLVCSAATLVKNISYKYKE-ELSAHLIVAGWDKKGGGQVYATLSGL---LTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLAMGRDGSSGGVAYVVTIDKD 200
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb6 (proteasome 20S subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216])

HSP 1 Score: 49.6766 bits (117), Expect = 7.433e-7
Identity = 40/192 (20.83%), Postives = 84/192 (43.75%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDL---IGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQV 653
             G+ ++A++    V +  D R        +    K+T    R+F    G A D   +A+ +T+Q   + +  ++    +T + +  ++ Y  R      E ++AGI     +   GG      +G  +      V G+ +  +YG  ++ +   M  ++  +  + AL  +++RD SSG  VR+ ++ +  V
Sbjct:   31 TGTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADAVTYQLGFHSIELDEAPLVQTAASLFRDMCYRYR------EELMAGIIVAGWDRRRGGQVYTVPVGGMLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDGSSGGVVRLAVISEQGV 216
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb8a (proteasome 20S subunit beta 8A [Source:ZFIN;Acc:ZDB-GENE-990415-141])

HSP 1 Score: 48.521 bits (114), Expect = 2.777e-6
Identity = 42/187 (22.46%), Postives = 80/187 (42.78%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKD 647
            +G+  +A K +  V +A D R        S + +KV +    L     G A D       L  +  LY+L   +++     S +LSN++   R     +  +I G D      +   +D  G ++    F  +G      YG+ ++ + E+M  ++ +E   + +  +  RD  SG  V +Y +++D
Sbjct:   66 HGTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKQGPGLYY--VDDNGTRLSGRMF-STGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQED 249
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: psmb3 (proteasome subunit beta 3 [Source:NCBI gene;Acc:549257])

HSP 1 Score: 275.404 bits (703), Expect = 1.350e-93
Identity = 120/204 (58.82%), Postives = 164/204 (80.39%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            SI+SYNG A++AM+GKDCVAIA D RFG+Q Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++PKT   M++NLLYE+RFGP+++EPVIAG+DP T + FI  +DLIGC ME+ DF+VSGTC+EQMYGMCE+LWE +M+ + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    5 SIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 208
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: psmb3 (proteasome subunit beta 3 [Source:NCBI gene;Acc:549257])

HSP 1 Score: 258.455 bits (659), Expect = 3.862e-87
Identity = 113/190 (59.47%), Postives = 154/190 (81.05%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLV 638
            MSI+SYNG A++AM+GKDCVAIA D RFG+Q Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++PKT   M++NLLYE+RFGP+++EPVIAG+DP T + FI  +DLIGC ME+ DF+VSGTC+EQMYGMCE+LWE +M+ + LFE ISQA+L+++DRD  SG GV V+++
Sbjct:    1 MSIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVM 190
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: psmb3 (proteasome subunit beta 3 [Source:NCBI gene;Acc:549257])

HSP 1 Score: 258.455 bits (659), Expect = 3.862e-87
Identity = 113/190 (59.47%), Postives = 154/190 (81.05%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLV 638
            MSI+SYNG A++AM+GKDCVAIA D RFG+Q Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++PKT   M++NLLYE+RFGP+++EPVIAG+DP T + FI  +DLIGC ME+ DF+VSGTC+EQMYGMCE+LWE +M+ + LFE ISQA+L+++DRD  SG GV V+++
Sbjct:    1 MSIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVM 190
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: psmb3 (proteasome subunit beta 3 [Source:NCBI gene;Acc:549257])

HSP 1 Score: 197.593 bits (501), Expect = 7.027e-63
Identity = 90/169 (53.25%), Postives = 126/169 (74.56%), Query Frame = 3 
Query:  177 TDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
             DF     F S  F+ F  L+T     +++L F+ NLYEL E ++++PKT   M++NLLYE+RFGP+++EPVIAG+DP T + FI  +DLIGC ME+ DF+VSGTC+EQMYGMCE+LWE +M+ + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:   47 CDFHSCCDFHSCCFLTFFNLSTR----SQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 211
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: psmb3 (proteasome subunit beta 3 [Source:NCBI gene;Acc:549257])

HSP 1 Score: 178.333 bits (451), Expect = 1.583e-55
Identity = 82/154 (53.25%), Postives = 115/154 (74.68%), Query Frame = 3 
Query:  177 TDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLV 638
             DF     F S  F+ F  L+T     +++L F+ NLYEL E ++++PKT   M++NLLYE+RFGP+++EPVIAG+DP T + FI  +DLIGC ME+ DF+VSGTC+EQMYGMCE+LWE +M+ + LFE ISQA+L+++DRD  SG GV V+++
Sbjct:   47 CDFHSCCDFHSCCFLTFFNLSTR----SQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVM 196
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb3 (proteasome (prosome, macropain) subunit, beta type 3 [Source:MGI Symbol;Acc:MGI:1347014])

HSP 1 Score: 280.026 bits (715), Expect = 1.402e-95
Identity = 126/205 (61.46%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC+EQMYGMCE+LWE NMD + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb1 (proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884])

HSP 1 Score: 71.633 bits (174), Expect = 1.809e-14
Identity = 49/213 (23.00%), Postives = 99/213 (46.48%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCET-LWEENMDS--------KQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S  ++NG  V+A+ G+D   +A+D R        + D  K  +   +  +G  G   D  T+ + +  +  +Y+ + NK M    ++ MLS +LY +RF P++V  +I G+D   G+  +   D +G   + + F   G+ +  +  + +  +  +NM +         +    +    +S+ +RD  +G  +R+ +V K+ +    V  R D
Sbjct:   30 SPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFDPVG-SYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb1 (proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884])

HSP 1 Score: 63.929 bits (154), Expect = 7.713e-12
Identity = 43/170 (25.29%), Postives = 81/170 (47.65%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQAL 581
            S  ++NG  V+A+ G+D   +A+D R        + D  K  +   +  +G  G   D  T+ + +  +  +Y+ + NK M    ++ MLS +LY +RF P++V  +I G+D   G+  +   D +G   + + F   G+ +     M + L +  +       C+S+AL
Sbjct:   30 SPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFDPVG-SYQRDSFKAGGSAS----AMLQPLLDNQV------MCLSRAL 187
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb6 (proteasome (prosome, macropain) subunit, beta type 6 [Source:MGI Symbol;Acc:MGI:104880])

HSP 1 Score: 57.7658 bits (138), Expect = 1.674e-9
Identity = 47/195 (24.10%), Postives = 84/195 (43.08%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRF--GIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESF----IGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQV 653
             G+ ++A++    V +  D R   G  +    TD  K+T     +F    G A D   VA+ +T+Q   + +  N+     T + +   + Y  R        +IAG DP  G       +GGM      M    F + G+ +  +YG  +  + E M   +  +  + AL  +++RD SSG  +R+  +++  V
Sbjct:   32 TGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTD--KLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYRED-LMAGIIIAGWDPQEGGQVYSVPMGGM------MVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESGV 217
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb1 (proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884])

HSP 1 Score: 51.2174 bits (121), Expect = 7.318e-8
Identity = 33/142 (23.24%), Postives = 68/142 (47.89%), Query Frame = 3 
Query:  285 LYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCET-LWEENMDS--------KQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            +Y+ + NK M    ++ MLS +LY +RF P++V  +I G+D   G+  +   D +G   + + F   G+ +  +  + +  +  +NM +         +    +    +S+ +RD  +G  +R+ +V K+ +    V  R D
Sbjct:    1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFDPVGS-YQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 140
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P33672|PSB3_BOVIN (Proteasome subunit beta type-3 OS=Bos taurus OX=9913 GN=PSMB3 PE=1 SV=3)

HSP 1 Score: 281.567 bits (719), Expect = 2.851e-95
Identity = 127/205 (61.95%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTCTEQMYGMCE+LWE NMD + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|Q9R1P1|PSB3_MOUSE (Proteasome subunit beta type-3 OS=Mus musculus OX=10090 GN=Psmb3 PE=1 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 9.808e-95
Identity = 126/205 (61.46%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC+EQMYGMCE+LWE NMD + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P40112|PSB3_RAT (Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.289e-94
Identity = 125/205 (60.98%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MS++SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC+EQMYGMCE+LWE NMD + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P49720|PSB3_HUMAN (Proteasome subunit beta type-3 OS=Homo sapiens OX=9606 GN=PSMB3 PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 2.431e-94
Identity = 126/205 (61.46%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TVA++L F+ NLYEL E ++++P TL  M++NLLYEKRFGP++ EPVIAG+DP T + FI  +DLIGC M ++DF+VSGTC EQMYGMCE+LWE NMD   LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|O73817|PSB3_ONCMY (Proteasome subunit beta type-3 OS=Oncorhynchus mykiss OX=8022 GN=psmb3 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.153e-92
Identity = 123/205 (60.00%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AMKGK CVAIA D RFG+Q Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++PKT   M+SNLLYE+RFGP+++EPVIAG+DP T E FI  +DLIGC M + DF+VSGTC+EQMYGMCE+LWE +M+ + LFE ISQA+L+++DRD  SG GV V ++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVQVIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A0X3PIR7 (Proteasome subunit beta OS=Schistocephalus solidus OX=70667 GN=PSB3 PE=3 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.810e-111
Identity = 145/205 (70.73%), Postives = 180/205 (87.80%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MS+L YNGSA++ MKG+DCVAIATDLRFGI  QTIST+FSKV Q G RLFVGFPGLATD++TV ++L F+KN+YEL EN+ ++PKTL  MLSNLLYE+RFGP+FVEPV+ G+DP+T E F+GGMDLIG   E+ +F+V+GTCTEQ+YGMCETLWE+N+ S +LFECISQ +L++L+RDC +GWG RVYLVEKDQVTISD+K+RMD
Sbjct:    1 MSVLEYNGSAIVGMKGRDCVAIATDLRFGIPYQTISTEFSKVEQLGPRLFVGFPGLATDKETVFQRLQFRKNMYELRENRNVKPKTLMCMLSNLLYERRFGPYFVEPVVVGLDPITEEPFVGGMDLIGSATETEEFVVAGTCTEQLYGMCETLWEKNLTSNELFECISQCMLNALNRDCIAGWGTRVYLVEKDQVTISDIKSRMD 205
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A5K3EK69 (Proteasome subunit beta OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 1.804e-109
Identity = 143/205 (69.76%), Postives = 178/205 (86.83%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSILSYNGSA++ MKGKDCVAIATD+RFG+  QTIST++SKV QFG  LFVGFPGLATD++TV ++L F+KN+YEL EN+ ++PKTL  MLSNLLYE+RFGP+FVEPV+ GIDP +G  F+ GMDLIGC  ES +F+V G+CTEQ+YGMCETLWE++MD+  LFECISQ +L++++RDC SGWG RVYL+EKD+VTISD+K RMD
Sbjct:    1 MSILSYNGSAIVGMKGKDCVAIATDMRFGVPHQTISTNYSKVEQFGPHLFVGFPGLATDKETVFQRLRFRKNMYELRENRHIKPKTLLCMLSNLLYERRFGPYFVEPVVVGIDPASGAPFVSGMDLIGCPAESEEFVVGGSCTEQLYGMCETLWEKDMDAAALFECISQCILNAVNRDCISGWGARVYLIEKDKVTISDLKGRMD 205
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A183TDI4 (Proteasome subunit beta OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS14532 PE=3 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.841e-109
Identity = 144/204 (70.59%), Postives = 179/204 (87.75%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S+L YNGSA++ MKG+DCVAIATDLRFGI  QTIST+FSKV Q G RLFVGFPGLATD++TV ++L F+KN+YEL EN+ ++PKTL  MLSNLLYE+RFGP+FVEPV+ G+DP+T E F+GGMDLIG   E+ +F+V+GTCTEQ+YGMCETLWE+N+ S +LFECISQ +L++L+RDC +GWG RVYLVEKDQVTISD+K+RMD
Sbjct:   61 SVLEYNGSAIVGMKGRDCVAIATDLRFGIPYQTISTEFSKVEQLGPRLFVGFPGLATDKETVFQRLQFRKNMYELRENRNVKPKTLMCMLSNLLYERRFGPYFVEPVVVGLDPITEEPFVGGMDLIGSATETEEFVVAGTCTEQLYGMCETLWEKNLTSNELFECISQCMLNALNRDCIAGWGTRVYLVEKDQVTISDIKSRMD 264
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: G4LUJ6 (Proteasome subunit beta OS=Schistosoma mansoni OX=6183 GN=Smp_121430.2 PE=3 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 3.882e-109
Identity = 147/205 (71.71%), Postives = 176/205 (85.85%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSIL++NGSAVIAM GKDC AIA DLRFG+ LQTISTDF+KV   G RL+VGFPGLATD  TV ++L F+KN+YEL ENK ++P+T++ MLSNLLYE+RFGP+FVEPVIAGID  T + ++  MDLIGC  E+NDF+VSGTCTEQMYGMCETLWEENM+SK+LFECISQ +L++L+RD  SGWG RVYL+EKD VTISD+K RMD
Sbjct:    1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDNQTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAVSGWGARVYLLEKDAVTISDLKMRMD 205
[Close]
BLAST of Proteasome subunit beta vs. TrEMBL
Match: C7TYR0 (Proteasome subunit beta OS=Schistosoma japonicum OX=6182 GN=EWB00_004333 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.017e-108
Identity = 145/205 (70.73%), Postives = 175/205 (85.37%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSIL++NGSAVI M GKDC AIA DLRFG+ LQTISTDF+KV   G RL+VGFPGLATD  TV ++L F+KN+YEL EN+ ++P+T++ MLSNLLYE+RFGP+FVEPV+AGID  T + ++  MDLIGC  E+NDF+VSGTCTEQMYGMCETLWEENMDSK+LFECISQ +L++L+RD  SGWG RVYL+EKD VTISD+K RMD
Sbjct:    1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISGWGARVYLIEKDAVTISDLKMRMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb3 (proteasome 20S subunit beta 3 [Source:NCBI gene;Acc:103043876])

HSP 1 Score: 276.944 bits (707), Expect = 1.731e-94
Identity = 123/205 (60.00%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AM+GK+CVAIA+D RFGIQ Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++PKT   M+SNLLYE+RFGP+++EPVIAG+DP T E FI  +DLIGC M + DF+VSGTC+EQMYGMCE+LWE +M+   LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTSEPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAMLNAVDRDAVSGMGVIVHVIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb1 (proteasome 20S subunit beta 1 [Source:NCBI gene;Acc:103036260])

HSP 1 Score: 67.781 bits (164), Expect = 4.272e-13
Identity = 48/213 (22.54%), Postives = 98/213 (46.01%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCET-LWEENMDSKQLF--------ECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S  ++NG  V+A+ G+D   +A+D R        S D  K  +      +G  G   D  T+ + +  +  +Y+   NK M    ++ MLS +LY +RF P++V  +I G+D   G   +   D +G   + + +   G+ +  +  + +  +  +NM++ Q          + +    +S+ +RD  +G  +++ +V K+ +    +  R D
Sbjct:   30 SPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHANNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSFDPVG-SYQRDSYKAGGSASAMLQPLLDNQIGFKNMENVQQLPLTLEKAVQLVKDVFISAAERDVYTGDALKICIVTKEGIREEVLPLRKD 240
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb9a (proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140])

HSP 1 Score: 56.225 bits (134), Expect = 3.260e-9
Identity = 38/189 (20.11%), Postives = 85/189 (44.97%), Query Frame = 3 
Query:   81 SYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKD 647
            S   + +IA+  +  V I +D R       ++   +K++    +++    G A D  T+AE + +Q +++ +   +    ++ + ++ N+ Y+ +        ++AG D   G      +D +   +    F + G+ +  +YG  +  + + M  K   E +  AL  +++RD SSG       ++KD
Sbjct:   14 SVKATTIIAIAFEGGVVIGSDSRVSAGASVVNRVMNKLSPLHDKIYCALSGSAADAQTMAEIVNYQLDVHSIEVGEDPLVRSAATLVKNISYKYKE-ELSAHLIVAGWDRRAGGQVYVTLDGL---LARQPFAIGGSGSSYIYGFVDAEYRQGMTKKDCQEFVVNALALAMNRDGSSGGVAYFVTIDKD 198
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb9a (proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140])

HSP 1 Score: 55.8398 bits (133), Expect = 5.697e-9
Identity = 37/185 (20.00%), Postives = 84/185 (45.41%), Query Frame = 3 
Query:   93 SAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKD 647
            + +IA+  +  V I +D R       ++   +K++    +++    G A D  T+AE + +Q +++ +   +    ++ + ++ N+ Y+ +        ++AG D   G      +D +   +    F + G+ +  +YG  +  + + M  K   E +  AL  +++RD SSG       ++KD
Sbjct:   28 TTIIAIAFEGGVVIGSDSRVSAGASVVNRVMNKLSPLHDKIYCALSGSAADAQTMAEIVNYQLDVHSIEVGEDPLVRSAATLVKNISYKYK-EELSAHLIVAGWDRRAGGQVYVTLDGL---LARQPFAIGGSGSSYIYGFVDAEYRQGMTKKDCQEFVVNALALAMNRDGSSGGVAYFVTIDKD 208
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb9a (proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140])

HSP 1 Score: 55.0694 bits (131), Expect = 8.644e-9
Identity = 38/189 (20.11%), Postives = 86/189 (45.50%), Query Frame = 3 
Query:   81 SYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKD 647
            S + + +IA+  +  V I +D R       ++   +K++    +++    G A D  T+AE + +Q +++ +   +    ++ + ++ N+ Y+ +        ++AG D   G      +D +   +    F + G+ +  +YG  +  + + M  K   E +  AL  +++RD SSG       ++KD
Sbjct:   16 SSDRTTIIAIAFEGGVVIGSDSRVSAGASVVNRVMNKLSPLHDKIYCALSGSAADAQTMAEIVNYQLDVHSIEVGEDPLVRSAATLVKNISYKYKE-ELSAHLIVAGWDRRAGGQVYVTLDGL---LARQPFAIGGSGSSYIYGFVDAEYRQGMTKKDCQEFVVNALALAMNRDGSSGGVAYFVTIDKD 200
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Match: psmb3 (proteasome 20S subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682])

HSP 1 Score: 272.707 bits (696), Expect = 1.665e-93
Identity = 124/205 (60.49%), Postives = 160/205 (78.05%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AM GKDCVAIA DLRFG+Q Q +S  F KV     RL++G  GLATD  TV+E+L F+ NLYEL E + ++PKT   M+SNLLYE+RFGP+FV+PVIAG+DPVT   FI  +DLIGC M + DF+VSGTC+EQ+YGMCE+LWE NM++  LFE ISQA+L++ DRD  SG G+ V+++EKD+VT   ++TR+D
Sbjct:    1 MSIMSYNGGAVVAMAGKDCVAIACDLRFGVQAQMVSNTFEKVFPMNERLYIGLAGLATDVQTVSERLRFRVNLYELRECRPIKPKTFMSMVSNLLYERRFGPYFVDPVIAGLDPVTLAPFICSLDLIGCPMVTEDFVVSGTCSEQLYGMCESLWEPNMEADDLFETISQAMLNAADRDALSGSGILVHIIEKDKVTTRKLRTRLD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PUP3 (Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10 [Source:SGD;Acc:S000000896])

HSP 1 Score: 220.705 bits (561), Expect = 4.091e-73
Identity = 103/201 (51.24%), Postives = 143/201 (71.14%), Query Frame = 3 
Query:   81 SYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S NG  V+AM GKDCVAIA DLR G Q   +S  F K+  +G  +F+G  GLATD  T+ E   ++ NLY+L E + + P+T + ++S+ LYE+RFGP+FV PV+AGI+  +G+ FI G DLIGC  E+ DFIVSGT ++Q++GMCE+L+E N++ + LFE ISQALL++ DRD  SGWG  VY+++KD+V    +K R D
Sbjct:    6 SINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE7 (Beta 6 subunit of the 20S proteasome [Source:SGD;Acc:S000000137])

HSP 1 Score: 54.6842 bits (130), Expect = 1.923e-9
Identity = 35/125 (28.00%), Postives = 62/125 (49.60%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFS-KVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNEN-KKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGC 455
            NG  ++ + G+D   +A D R  I   +I++ +  KV   G  + +   G A D D + ++       Y  + N KK+   + +  + +LLY KRF P++V  +IAG+D   G+  +   D +G 
Sbjct:   27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSFDPVGS 149
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE6 (Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions to create a more active proteasomal isoform; GFP-fusion protein relocates from cytosol to the mitochondrial surface upon oxidative stress [Source:SGD;Acc:S000005398])

HSP 1 Score: 48.9062 bits (115), Expect = 2.140e-7
Identity = 30/114 (26.32%), Postives = 55/114 (48.25%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFG------PFFVEPVIAGIDP 410
             G+  + +KGK+CV +  + R  ++LQ      SKV++  S + + F GL  D   + EK   +   + L     +  + L+  ++ +  ++R+       PF V  +IAG DP
Sbjct:   29 RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGV--QQRYTQSGGVRPFGVSTLIAGFDP 140
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE2 (Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome [Source:SGD;Acc:S000006307])

HSP 1 Score: 48.9062 bits (115), Expect = 2.421e-7
Identity = 44/187 (23.53%), Postives = 84/187 (44.92%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKD 647
            +G+  +A + +  + +A D R        S    KV +    L     G A D       L  Q  L+EL E +++     S +LSNL+Y+ +     +  +I G     G + I  +D  G +++ + F V G+     YG+ ++ ++ ++  +       +++L++  RD  SG  V +Y V +D
Sbjct:   74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPT-IYYVDSDGTRLKGDIFCV-GSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTED 258
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE3 (Beta 1 subunit of the 20S proteasome; responsible for cleavage after acidic residues in peptides [Source:SGD;Acc:S000003538])

HSP 1 Score: 45.4394 bits (106), Expect = 1.988e-6
Identity = 42/186 (22.58%), Postives = 87/186 (46.77%), Query Frame = 3 
Query:   90 GSAVIAMKGKDCVAIATDLRF--GIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVT-GESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLV 638
            G++++A+  KD V +  D R   G  +    TD  K+T+   +++    G A D   +A+ + +   LY  ++      +T + +   L YE +        ++AG D    GE +      +G  +    + ++G+ +  +YG C+  + ENM  ++  + I  +L  ++  D SSG  +R+ ++
Sbjct:   19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTD--KLTRVHDKIWCCRSGSAADTQAIADIVQYHLELY-TSQYGTPSTETAASVFKELCYENK-DNLTAGIIVAGYDDKNKGEVY---TIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVL 197
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO42974 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7S085])

HSP 1 Score: 283.108 bits (723), Expect = 3.146e-97
Identity = 127/205 (61.95%), Postives = 160/205 (78.05%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+ YNG+A+IAM GK+CVAIA D R GIQ QT+S DF K+ Q G +LFVG PGLATD  T++ +L F+ NLYEL E + ++PKT   M+SNLLYE+RFGP+FVEPVIAG+DP T E FI  MDLIGC ME+ DF+VSGTC+EQMYGMCE+LW  +++   LFE ISQALL+++DRD  SGWG  V+++E D+VT   +K RMD
Sbjct:    1 MSIMEYNGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDVQTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPFISSMDLIGCPMETKDFVVSGTCSEQMYGMCESLWVPDLEPDDLFETISQALLNAVDRDAVSGWGAVVHVIEPDKVTTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO34642 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7SNR2])

HSP 1 Score: 68.5514 bits (166), Expect = 6.731e-14
Identity = 49/213 (23.00%), Postives = 93/213 (43.66%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMC---------ETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S  ++NG  V+A+ G+D   IA+D R     Q  + D  KV +      +G  G   D  T+ + ++ +  +YE +  K M    ++ MLS +LY +RF P++   ++AG+D   G+  +   D +G   E   +   G+ +  +  +          E +    +   +    +     S+ +RD  +G  V + +V  + V+      R D
Sbjct:   19 SPYAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDCLTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDS-EGKGCVFSFDPVG-SYEREVYRAGGSASALLQPLLDNQIGFKNQEGVPHTPLTRDKAVALVKDVFTSAAERDIYTGDAVIINVVSSEGVSEEAFPLRRD 229
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO42345 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7S1L2])

HSP 1 Score: 50.8322 bits (120), Expect = 7.072e-8
Identity = 39/180 (21.67%), Postives = 76/180 (42.22%), Query Frame = 3 
Query:  126 VAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESF----IGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQV 653
            V I  D R        +    K+T    R+F    G A D   +A+ + +  N + +   + +  KT +++   + Y  R        + AG D + G       +GGM +         F + G+ +  +YG C+  ++  M  ++ F  +  A+  ++ RD SSG  +R+  +++  V
Sbjct:    9 VVIGADSRTTTGSYVANRVTDKLTPVTERIFCCRSGSAADTQAIADIVKYHLNFHSIEMEEPVLVKTAANLFREMCYGYR-DQLSAGIICAGWDKLNGGQVYSIPLGGMCI------RQPFTIGGSGSTYIYGHCDATYKSGMSKEECFNFVKTAVALAMSRDGSSGGIIRMAGIDETGV 181
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb3 (proteasome 20S subunit beta 3 [Source:NCBI gene;Acc:101167100])

HSP 1 Score: 273.863 bits (699), Expect = 2.826e-93
Identity = 121/205 (59.02%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   69 MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MSI+SYNG AV+AM+GK+CVAIA D RFGIQ Q ++TDF K+   G RL++G  GLATD  TV+++L F+ NLYEL E ++++PKT   M+SNLLYE+RFGP+++EPVIAG+DP + E FI  +DLIGC M + DF+VSGTC+EQMYGMCE+LWE +++ + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:    1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 205
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb3 (proteasome 20S subunit beta 3 [Source:NCBI gene;Acc:101167100])

HSP 1 Score: 187.578 bits (475), Expect = 5.016e-59
Identity = 81/142 (57.04%), Postives = 115/142 (80.99%), Query Frame = 3 
Query:  258 AEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            +++L F+ NLYEL E ++++PKT   M+SNLLYE+RFGP+++EPVIAG+DP + E FI  +DLIGC M + DF+VSGTC+EQMYGMCE+LWE +++ + LFE ISQA+L+++DRD  SG GV V+++EKD++T   +K RMD
Sbjct:   82 SQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 223
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb1 (proteasome 20S subunit beta 1 [Source:NCBI gene;Acc:101158593])

HSP 1 Score: 70.8626 bits (172), Expect = 2.887e-14
Identity = 48/213 (22.54%), Postives = 100/213 (46.95%), Query Frame = 3 
Query:   72 SILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCET-LWEENMDS--------KQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            S  ++NG  V+A+ G+D   +A+D R        S D  K  +      +G  G   D  T+ + +  +  +Y+ + NK M    ++ MLS +LY +RF P++V  +I G+D   G+  +   D +G   + + +   G+ +  +  + +  +  +NM+          +  + +    +S+ +RD  +G  +R+ +V K+ +   ++  R D
Sbjct:   27 SPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-QGKGAVYSFDPVG-SYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVEHVPLTKDKAVQLVKDVFVSAAERDVYTGDALRICIVTKEGIEEQNIPLRKD 237
[Close]
BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb9 (LMP2 [Source:NCBI gene;Acc:100049434])

HSP 1 Score: 53.9138 bits (128), Expect = 2.196e-8
Identity = 38/187 (20.32%), Postives = 88/187 (47.06%), Query Frame = 3 
Query:   90 GSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQ 650
            G+ +IA++    V + +D R       ++   +K++    +++    G A D  T+AE + +Q +++ L  ++  + ++ + ++ N+ Y+ +        ++AG D   G         +G  +    F + G+ +  +YG  +  +   M  ++  + +   L  +++RD SSG GV  Y+V  D+
Sbjct:   17 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKE-ELSAHLIVAGWDRRDGGQVFA---TLGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSG-GV-AYIVTIDE 197
[Close]
BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000027891.1 (SMESG000027891.1)

HSP 1 Score: 399.053 bits (1024), Expect = 4.638e-143
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 3 
Query:  108 MKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            MKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD
Sbjct:    1 MKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 192
[Close]
BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000016299.1 (SMESG000016299.1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.371e-14
Identity = 49/210 (23.33%), Postives = 90/210 (42.86%), Query Frame = 3 
Query:   87 NGSAVIAMKGKDCVAIATDLRF--GIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEEN---------MDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDVKTRMD 683
            NG  V+ + G D   +A+D R         +S D+S + +  +   +   G   D  T+ + L  +  +Y+L  NK+M    LS  LSN LY +RF P +V  ++ G+D   G   +   D +G   E   +  SG+    +    +    +N         + ++   + +    +S+ +RD   G  + + ++ KD V     + R D
Sbjct:    9 NGGTVLGIAGDDYCLLASDTRLCEEASYNILSHDYSHLYKINNNSIIAATGFQGDTLTLMKTLKAKSQMYKLEHNKEMSTNALSQTLSNTLYSRRFFPLYVSNILGGLDE-NGRGALYSYDPVGS-FEREAYRASGSAGPILQPFLDNQISKNNQLGVEKKSISAEDAVKFVRDVFISAAERDIHCGDNLIINVITKDGVKEIKYELRKD 216
[Close]
BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000067118.1 (SMESG000067118.1)

HSP 1 Score: 47.3654 bits (111), Expect = 2.835e-6
Identity = 38/192 (19.79%), Postives = 85/192 (44.27%), Query Frame = 3 
Query:   90 GSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESF----IGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQV 653
            G+ ++A   +  V I  D R        +    K+TQ   +++    G + D   + + + +   L+    N+ +     +++  N+ Y+ R        ++AG D   G       +GGM      ++      SG+ +  + G+ + ++ ENM  ++  + ++ A+  ++ RD SSG  +R+ ++ K+ V
Sbjct:    2 GTTLVAAVFEGGVVIGADSRTSSGTYVSNRVSDKLTQVNEKIYCCRSGSSADTQALTDIVKYNLELHSTMYNRPVSVLHAANLFKNMCYDYR-DQLTAGIIVAGFDEDKGGQIYTVPLGGM------LKRQTVSCSGSGSTYILGLLDEIYRENMSEEECLKFVTVAVKHAIIRDGSSGGVIRLAVINKEGV 186
[Close]
BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000067118.1 (SMESG000067118.1)

HSP 1 Score: 46.9802 bits (110), Expect = 3.443e-6
Identity = 38/192 (19.79%), Postives = 85/192 (44.27%), Query Frame = 3 
Query:   90 GSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLFVGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRFGPFFVEPVIAGIDPVTGESF----IGGMDLIGCQMESNDFIVSGTCTEQMYGMCETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQV 653
            G+ ++A   +  V I  D R        +    K+TQ   +++    G + D   + + + +   L+    N+ +     +++  N+ Y+ R        ++AG D   G       +GGM      ++      SG+ +  + G+ + ++ ENM  ++  + ++ A+  ++ RD SSG  +R+ ++ K+ V
Sbjct:   11 GTTLVAAVFEGGVVIGADSRTSSGTYVSNRVSDKLTQVNEKIYCCRSGSSADTQALTDIVKYNLELHSTMYNRPVSVLHAANLFKNMCYDYR-DQLTAGIIVAGFDEDKGGQIYTVPLGGM------LKRQTVSCSGSGSTYILGLLDEIYRENMSEEECLKFVTVAVKHAIIRDGSSGGVIRLAVINKEGV 195
The following BLAST results are available for this feature:
BLAST of Proteasome subunit beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PSMB35.061e-9561.46proteasome 20S subunit beta 3 [Source:HGNC Symbol;... [more]
PSMB35.061e-9561.46proteasome 20S subunit beta 3 [Source:HGNC Symbol;... [more]
PSMB31.083e-6462.07proteasome 20S subunit beta 3 [Source:HGNC Symbol;... [more]
PSMB31.083e-6462.07proteasome 20S subunit beta 3 [Source:HGNC Symbol;... [more]
PSMB32.904e-3961.62proteasome 20S subunit beta 3 [Source:HGNC Symbol;... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
pbs-32.003e-7249.27Proteasome subunit beta type-3 [Source:UniProtKB/... [more]
pbs-14.270e-724.19Proteasome subunit beta [Source:UniProtKB/TrEMBL;... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Prosbeta31.311e-9360.49gene:FBgn0026380 transcript:FBtr0082010[more]
Prosbeta65.443e-1323.33gene:FBgn0002284 transcript:FBtr0075360[more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
psmb39.338e-9459.51proteasome 20S subunit beta 3 [Source:ZFIN;Acc:ZDB... [more]
psmb11.109e-1323.00proteasome 20S subunit beta 1 [Source:ZFIN;Acc:ZDB... [more]
psmb9a3.201e-719.89proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZD... [more]
psmb67.433e-720.83proteasome 20S subunit beta 6 [Source:ZFIN;Acc:ZDB... [more]
psmb8a2.777e-622.46proteasome 20S subunit beta 8A [Source:ZFIN;Acc:ZD... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
psmb31.350e-9358.82proteasome subunit beta 3 [Source:NCBI gene;Acc:54... [more]
psmb33.862e-8759.47proteasome subunit beta 3 [Source:NCBI gene;Acc:54... [more]
psmb33.862e-8759.47proteasome subunit beta 3 [Source:NCBI gene;Acc:54... [more]
psmb37.027e-6353.25proteasome subunit beta 3 [Source:NCBI gene;Acc:54... [more]
psmb31.583e-5553.25proteasome subunit beta 3 [Source:NCBI gene;Acc:54... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Psmb31.402e-9561.46proteasome (prosome, macropain) subunit, beta type... [more]
Psmb11.809e-1423.00proteasome (prosome, macropain) subunit, beta type... [more]
Psmb17.713e-1225.29proteasome (prosome, macropain) subunit, beta type... [more]
Psmb61.674e-924.10proteasome (prosome, macropain) subunit, beta type... [more]
Psmb17.318e-823.24proteasome (prosome, macropain) subunit, beta type... [more]
back to top
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P33672|PSB3_BOVIN2.851e-9561.95Proteasome subunit beta type-3 OS=Bos taurus OX=99... [more]
sp|Q9R1P1|PSB3_MOUSE9.808e-9561.46Proteasome subunit beta type-3 OS=Mus musculus OX=... [more]
sp|P40112|PSB3_RAT1.289e-9460.98Proteasome subunit beta type-3 OS=Rattus norvegicu... [more]
sp|P49720|PSB3_HUMAN2.431e-9461.46Proteasome subunit beta type-3 OS=Homo sapiens OX=... [more]
sp|O73817|PSB3_ONCMY1.153e-9260.00Proteasome subunit beta type-3 OS=Oncorhynchus myk... [more]
back to top
BLAST of Proteasome subunit beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0X3PIR74.810e-11170.73Proteasome subunit beta OS=Schistocephalus solidus... [more]
A0A5K3EK691.804e-10969.76Proteasome subunit beta OS=Mesocestoides corti OX=... [more]
A0A183TDI41.841e-10970.59Proteasome subunit beta OS=Schistocephalus solidus... [more]
G4LUJ63.882e-10971.71Proteasome subunit beta OS=Schistosoma mansoni OX=... [more]
C7TYR01.017e-10870.73Proteasome subunit beta OS=Schistosoma japonicum O... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
psmb31.731e-9460.00proteasome 20S subunit beta 3 [Source:NCBI gene;Ac... [more]
psmb14.272e-1322.54proteasome 20S subunit beta 1 [Source:NCBI gene;Ac... [more]
psmb9a3.260e-920.11proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZD... [more]
psmb9a5.697e-920.00proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZD... [more]
psmb9a8.644e-920.11proteasome 20S subunit beta 9a [Source:ZFIN;Acc:ZD... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
psmb31.665e-9360.49proteasome 20S subunit beta 3 [Source:ZFIN;Acc:ZDB... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
PUP34.091e-7351.24Beta 3 subunit of the 20S proteasome; involved in ... [more]
PRE71.923e-928.00Beta 6 subunit of the 20S proteasome [Source:SGD;A... [more]
PRE62.140e-726.32Alpha 4 subunit of the 20S proteasome; may replace... [more]
PRE22.421e-723.53Beta 5 subunit of the 20S proteasome; responsible ... [more]
PRE31.988e-622.58Beta 1 subunit of the 20S proteasome; responsible ... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO429743.146e-9761.95Proteasome subunit beta type [Source:UniProtKB/Tr... [more]
EDO346426.731e-1423.00Proteasome subunit beta type [Source:UniProtKB/Tr... [more]
EDO423457.072e-821.67Proteasome subunit beta type [Source:UniProtKB/Tr... [more]
back to top
BLAST of Proteasome subunit beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
psmb32.826e-9359.02proteasome 20S subunit beta 3 [Source:NCBI gene;Ac... [more]
psmb35.016e-5957.04proteasome 20S subunit beta 3 [Source:NCBI gene;Ac... [more]
psmb12.887e-1422.54proteasome 20S subunit beta 1 [Source:NCBI gene;Ac... [more]
psmb92.196e-820.32LMP2 [Source:NCBI gene;Acc:100049434][more]
back to top
BLAST of Proteasome subunit beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000027891.14.638e-143100.00SMESG000027891.1[more]
SMESG000016299.18.371e-1423.33SMESG000016299.1[more]
SMESG000067118.12.835e-619.79SMESG000067118.1[more]
SMESG000067118.13.443e-619.79SMESG000067118.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30033173 ID=SMED30033173|Name=Proteasome subunit beta|organism=Schmidtea mediterranea sexual|type=transcript|length=782bp
CGTTTAACTTTCCAAATTTTATATATTTTAAATTAATCTTAATAATATTT
TGTTGAATTAAATATATAATGAGTATATTATCTTATAATGGATCAGCTGT
AATTGCTATGAAAGGCAAAGATTGTGTTGCTATTGCAACTGATTTACGTT
TTGGCATCCAATTACAAACTATTTCTACAGATTTTAGCAAAGTTACTCAG
TTCGGTTCAAGACTTTTTGTTGGATTCCCTGGTCTTGCTACAGATCGTGA
TACTGTGGCTGAAAAGTTAACTTTCCAAAAAAATTTGTATGAGTTAAACG
AAAATAAGAAAATGCGTCCAAAGACTTTGTCTCACATGCTAAGCAATCTT
TTATATGAAAAAAGATTTGGTCCGTTTTTTGTTGAACCTGTCATCGCTGG
GATTGATCCAGTAACTGGGGAATCTTTCATAGGAGGTATGGATTTAATTG
GATGTCAGATGGAATCGAACGATTTTATCGTTAGCGGTACATGCACTGAA
CAAATGTACGGTATGTGTGAGACATTGTGGGAAGAAAATATGGACTCGAA
ACAATTGTTTGAGTGCATTAGCCAAGCTTTGTTAAGTTCGTTAGATCGCG
ATTGTTCTTCGGGATGGGGTGTTCGAGTTTATTTAGTTGAAAAGGATCAA
GTCACAATTTCTGATGTGAAAACAAGAATGGATTAATTTTGTATCAAATA
AATTTGTTGATATTGATTTTGGTTTTTTAAGCTTATTATAATTATGGATA
TTTCTGGTACTAAATAAATTATTATTCACGTT
back to top

protein sequence of SMED30033173-orf-1

>SMED30033173-orf-1 ID=SMED30033173-orf-1|Name=SMED30033173-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=206bp
MSILSYNGSAVIAMKGKDCVAIATDLRFGIQLQTISTDFSKVTQFGSRLF
VGFPGLATDRDTVAEKLTFQKNLYELNENKKMRPKTLSHMLSNLLYEKRF
GPFFVEPVIAGIDPVTGESFIGGMDLIGCQMESNDFIVSGTCTEQMYGMC
ETLWEENMDSKQLFECISQALLSSLDRDCSSGWGVRVYLVEKDQVTISDV
KTRMD*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000142posterior region of the whole animal
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR033811Proteasome_beta_3
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type
Vocabulary: biological process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006508proteolysis
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
Vocabulary: molecular function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0008233peptidase activity
GO:0016787hydrolase activity
Vocabulary: cellular component
TermDefinition
GO:0005839proteasome core complex
GO:0000502proteasome complex
GO:0005634nucleus
GO:0005737cytoplasm
GO:0019774proteasome core complex, beta-subunit complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3DG3DSA:3.60.20.10coord: 1..205
e-value: 6.8E-56
score: 191.1
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILYSSF56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 4..204
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 7..189
e-value: 3.2E-37
score: 127.9
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 2..205
IPR033811Proteasome beta 3 subunitPANTHERPTHR11599:SF62PROTEASOME SUBUNIT BETA TYPE-3coord: 2..205
IPR033811Proteasome beta 3 subunitCDDcd03759proteasome_beta_type_3coord: 6..201
e-value: 6.55865E-116
score: 326.122
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 12..59
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 8..190
score: 40.876