TNF receptor-associated factor 6
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30033001 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 69.3218 bits (168), Expect = 5.949e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 391 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 513
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 69.3218 bits (168), Expect = 5.949e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 391 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 513
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 68.9366 bits (167), Expect = 6.400e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 333 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 455
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 69.3218 bits (168), Expect = 6.933e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 416 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 538
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 69.3218 bits (168), Expect = 6.933e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 416 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 538
BLAST of TNF receptor-associated factor 6 vs. Ensembl Celegans
Match: trf-1 (TNF Receptor Associated Factor (TRAF) homolog; TRF-1 [Source:UniProtKB/TrEMBL;Acc:G5EG80]) HSP 1 Score: 55.8398 bits (133), Expect = 3.763e-8 Identity = 33/88 (37.50%), Postives = 44/88 (50.00%), Query Frame = 2 Query: 899 WKIKNFSQKIGER-------IYSKPFYSGRFGYKL----CL-GVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVID 1126 WKI Q+ E I+S PF S RFGYK+ CL G S K +Y + L++GEFD L WPF ++KI ++D Sbjct: 267 WKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLY-------VLLLKGEFDPTLEWPFHRAIKISLLD 347
BLAST of TNF receptor-associated factor 6 vs. Ensembl Celegans
Match: trf-2 (TNF Receptor Associated Factor (TRAF) homolog [Source:UniProtKB/TrEMBL;Acc:Q9N586]) HSP 1 Score: 51.6026 bits (122), Expect = 6.612e-7 Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 2 Query: 905 IKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD 1183 +K K IYS+PFYS +GYK+ + V + D L ++ V + LM+GE+D+ L WPF+ V ++ S++ TKTI ++ P+ Sbjct: 172 VKATKNKSHRSIYSQPFYSHGYGYKM-MAVAAPYG-DGLAFREYFSVFVCLMKGEWDDILEWPFRCDVTFSIL-SDDKKELLTKTIYVNEMPE 261
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf3 (TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]) HSP 1 Score: 81.2629 bits (199), Expect = 5.555e-16 Identity = 78/366 (21.31%), Postives = 159/366 (43.44%), Query Frame = 2 Query: 179 VKCPRENCQFKEEL-DLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKE-NLIKQSKIFSE-----KTNIESYKEIGEAIPAKFQQQIGG----VKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 V CP +C F L + H C K V+C F GC + + ++ E+ +H + H++++ N + ++ +L + + + + R R+ E+++ +N Q++Q+L +++ ++ ++++++E E ++ + E + ++ES + + ++ + G LE +HD+ ++ E+ + LE+ +G WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D G K + P + +PT E NI Sbjct: 204 VACP-NHCSFSSILRSELSSHQHDCPKAQVTCSFIRYGC-SYKGLNQEMREHESSFASEHLRMMAVR---------------------------NTTLEAKVEDVKSELMERYKVLPSLSSRLAEVERQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRAMREEVETLRGSVESMRSMVSSLDSSCVNSASGSHTLASLEQQLTRHDDLMSVHDVRLA-EMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTLMLMD--QGPARKHLGDAFKPDPSSSSFRRPTGEMNI 535
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 79.7221 bits (195), Expect = 1.619e-15 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 GI+ W+++NFS Q+ G+ I +S PFY+GR GYKLCL + + +C+ F++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT RN P +V F Sbjct: 375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 79.7221 bits (195), Expect = 1.619e-15 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 GI+ W+++NFS Q+ G+ I +S PFY+GR GYKLCL + + +C+ F++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT RN P +V F Sbjct: 375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 79.7221 bits (195), Expect = 1.619e-15 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 GI+ W+++NFS Q+ G+ I +S PFY+GR GYKLCL + + +C+ F++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT RN P +V F Sbjct: 375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf5 (Tnf receptor-associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-071120-3]) HSP 1 Score: 60.4622 bits (145), Expect = 8.439e-10 Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 2 Query: 887 GIFKWKIKNF--SQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNI---------------PINVIFV 1243 G WK++++ ++ G + S PFY+ R GYKL V + L D ++ + + +MRG+FD L WPF+ ++ + ++D + + T PD D + +PT++ N+ P N +FV Sbjct: 111 GKLIWKVRDYWHRKESGAALSSSPFYTSRSGYKL--SVRAYLGGDGSGRGSHMSLYITIMRGDFDSFLPWPFRQNITLTLLDQSGTRNHMSHTF----IPDVNSDSFHRPTSDANVATGFTRFISHCDLENPRNAVFV 242
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: egf (epidermal growth factor [Source:Xenbase;Acc:XB-GENE-951823]) HSP 1 Score: 73.1738 bits (178), Expect = 2.971e-13 Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIG----ER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRVV 1300 GIF W+I NF+ + ER I+S+ FY+G+ GYKLCL + +L +C +++L H M+GE+D L WP + ++++ ++D G + + P+ + +PT RN P +V F VKN+ L + C V Sbjct: 387 GIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPS---AQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPTVARN-PKGFGYVTFMHLQALKQRQYVKNDTLLVRCSVT 536
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 72.4034 bits (176), Expect = 5.549e-13 Identity = 99/435 (22.76%), Postives = 181/435 (41.61%), Query Frame = 2 Query: 38 FCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKE-ELDLIEHHIKTCD--------------------KQTVSCPFNAIGCE---------TNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKL--FNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKE-NELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 F +C + FC T+ C+ + ++L + + L CPR +C+ K DL +H KTC + V CP I C +E + +I H S H+ L+ E N L ++ SM +N+ +++ N++ F + QL N + +I+++ R + +++DL +E ++Q D + +N + +N + Q ++ ++ N S+ P + QI +HD+ +++ ++R S G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D G + + + P+ + KPT E NI Sbjct: 96 FKDNCCRREVLALQMFCRNETRGCKELITLGNLLIHLKSDCQFEEL--SCPRADCKEKVIRKDLSDHIEKTCKYRETPCKFCRNQVPLVEMQKHEDVDCPSVVISCPHMCSVKSLLRSEGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKV-SMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYE------SLQNRLSQLEVMAK--NAASWN------PGVLETQIN---------RHDQMLSVHDIRLADMDLRFQVLETASYN--GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMD--QGPSRRHLGDAFKPDPNSSSFKKPTGEMNI 498
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 71.633 bits (174), Expect = 8.932e-13 Identity = 86/361 (23.82%), Postives = 161/361 (44.60%), Query Frame = 2 Query: 173 LIVKCPRENCQFKEEL-DLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKL--FNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKE-NELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 +++ CP C K L + H+ C +C F GC T + + +I H S H+ L+ E N L ++ SM +N+ +++ N++ F + QL N + +I+++ R + +++DL +E ++Q D + +N + +N + Q ++ ++ N S+ P + QI +HD+ +++ ++R S G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D G + + + P+ + KPT E NI Sbjct: 195 VVISCP-HMCSVKSLLRSELNAHLLECVNAPSTCSFKRYGC-TFKGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKV-SMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYE------SLQNRLSQLEVMAK--NAASWN------PGVLETQIN---------RHDQMLSVHDIRLADMDLRFQVLETASYN--GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMD--QGPSRRHLGDAFKPDPNSSSFKKPTGEMNI 523
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: hspb6 (heat shock protein family B (small) member 6 [Source:Xenbase;Acc:XB-GENE-876273]) HSP 1 Score: 56.225 bits (134), Expect = 5.272e-8 Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSEN 1135 G+F WKI + + K + + YS FY+ ++GYK+CL + L D +V + +M+GE+D L WPFK+ V ++D N Sbjct: 230 GVFLWKISDLTNKSHDAVTGRAISLYSPAFYTAKYGYKVCLRI--YLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTFVLVDHNN 317
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: sytl2 (synaptotagmin like 2 [Source:Xenbase;Acc:XB-GENE-945155]) HSP 1 Score: 53.1434 bits (126), Expect = 5.928e-7 Identity = 36/120 (30.00%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDD--GWGKPTTERN 1219 G+ WKI ++S+K+ E +S PFY+ ++GYKL V++ L + + V + ++ GE+D L WPF V ++D + K + I + PD + + KPT RN Sbjct: 308 GVLIWKISDYSRKVQEAKVRGNFESFSPPFYTHKYGYKL--QVSAFLNGNGSGEGSYLSVYIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFNPDPNWKNFQKPTGSRN 425
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf6 (TNF receptor-associated factor 6 [Source:MGI Symbol;Acc:MGI:108072]) HSP 1 Score: 72.4034 bits (176), Expect = 4.382e-13 Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297 GI+ WKI NF + + I+S FY+GR GYKLC+ + +L +C +++L H M+GE+D +L WPF+ ++++ ++D + P+ + +PT RN P +V F +K++ L + C V Sbjct: 359 GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEALIRQNHEEVMDAKPELLAFQRPTIPRN-PKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 69.3218 bits (168), Expect = 3.701e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 390 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 512
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 69.3218 bits (168), Expect = 3.701e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 390 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 512
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 69.3218 bits (168), Expect = 4.165e-12 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243 G+ WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D + + K P+ + KPT E NI +FV Sbjct: 415 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 537
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf1 (TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]) HSP 1 Score: 61.6178 bits (148), Expect = 7.794e-10 Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV-IFVPFD---SPA---VKNNRLEIECRV 1297 G F WKI N +++ E + +S FY+ ++GYKLCL + L D + ++ + + +MRGE+D L WPF+N V ++D +N + + PD + +P +E N+ +F P SP VK++ + ++C V Sbjct: 260 GTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLY--LNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD-QNNREHAIDAFR----PDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIV 405
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|Q6IWL4|TRAF6_DANRE (TNF receptor-associated factor 6 OS=Danio rerio OX=7955 GN=traf6 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.222e-14 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 GI+ W+++NFS Q+ G+ I +S PFY+GR GYKLCL + + +C+ F++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT RN P +V F Sbjct: 375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|Q6DJN2|TRF6B_XENLA (TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.539e-14 Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 2 Query: 887 GIFKWKIKNFS--QKIGER-----IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297 G+F WKIK FS QK E I+S FY+G+ GYKLCL + +L +C +++L H M+GE+D L WP ++++ ++D G + + PD + +PTT+RN P +V F VKN+ L + C V Sbjct: 385 GVFIWKIKGFSGLQKTQEEEKPVVIHSPGFYTGKPGYKLCLRLHLQLPS---AQRCANYISLFVHTMQGEYDSLLPWPLHGTIRLSILDQSEGAIIQDQEEVMDTKPDLLAFQRPTTQRN-PKGFGYVTFMHLNTLKQRQYVKNDTLFVRCAV 533
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|Q28DL4|TRAF6_XENTR (TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.719e-12 Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIG----ER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRVV 1300 GIF W+I NF+ + ER I+S+ FY+G+ GYKLCL + +L +C +++L H M+GE+D L WP + ++++ ++D G + + P+ + +PT RN P +V F VKN+ L + C V Sbjct: 387 GIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPS---AQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPTVARN-PKGFGYVTFMHLQALKQRQYVKNDTLLVRCSVT 536
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|P70196|TRAF6_MOUSE (TNF receptor-associated factor 6 OS=Mus musculus OX=10090 GN=Traf6 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.065e-12 Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297 GI+ WKI NF + + I+S FY+GR GYKLC+ + +L +C +++L H M+GE+D +L WPF+ ++++ ++D + P+ + +PT RN P +V F +K++ L + C V Sbjct: 359 GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEALIRQNHEEVMDAKPELLAFQRPTIPRN-PKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|B5DF45|TRAF6_RAT (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.449e-12 Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297 GI+ WKI NF + + I+S FY+GR GYKLC+ + +L +C +++L H M+GE+D +L WPF+ ++++ ++D + P+ + +PT RN P +V F +K++ L + C V Sbjct: 359 GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRN-PKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: I1ZID8 (TNF receptor associated factor-2 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.720e-18 Identity = 43/122 (35.25%), Postives = 72/122 (59.02%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNC--QIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIK 361 ++NAC + C CRFCS CI Y+ +CPG T C + + ++I TD+ +N +I+++ VKCP E C+ EL IE H++ C ++ +CPF +GC +++ ++ +HL + H K Sbjct: 34 LVNACQSRCGCRFCSKCIMEYVSRGNLYCPGGTSECKEENLTICSNIHTDYRVNRKIAKMRVKCPEETCKVYCELVDIEEHLRLCTMKSQNCPFFVLGCNQPKMVIQDLTNHLQNGTFQHSK 155
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: F6S636 (TNF receptor-associated factor OS=Ornithorhynchus anatinus OX=9258 GN=TRAF6 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.326e-16 Identity = 99/455 (21.76%), Postives = 186/455 (40.88%), Query Frame = 2 Query: 11 ACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQF---YNINLQLTNQQEKILEMGRREKANTREI-----EDLKRENSQIKQQLDIIELKSTNQ--QQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297 A PC RFC CI + CP + I N + D I L+V+CP E C K EL +E H CD V CP I + N ++HD + S + L + + ++N L + E L +Q Y+++ G REK ++ +D + + Q L I + + Q +++ + +L + S + +++++E + + + +Q ++ + + + +L + +E+++ +GI+ WKI NF + + I+S FY+G+ GYKLC+ + +L +C +++L H M+GE+D +L WPF+ ++++ ++D + P+ + +PT RN P +V F +K++ L + C V Sbjct: 80 AVQTPCGHRFCKACIVKSIRDAGHKCPVDNE----ILLENQLFPDNFAKREILSLMVRCPNEGCLMKMELRQLEEHQSLCDYALVECPQCHISFQKN-ILHDHVVSECPRRQVSCVNCALSMAFEDK----EYHDQNCPLASVFCEYCSTVLIREQMPTHYDMDCPTAPIPCTFSSFGCREKMQRNQLARHLQDDTQAHMRMMAQALHSISITALTPVPQLDVLPFDPASLPRSSSGYDCHPEVQNFQETIQQLEGRLVRQDHQIRELIAKMETQSSHVVDLKRTIRTLEDKIAEMEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPN---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDTKPELLAFQRPTIHRN-PKGFGYVTFMHLQALRQRAFIKDDTLLVRCEV 521
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: T1E101 (TRAF-6 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.493e-16 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQ--IINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHL 334 M +AC + C C +C CI YL N+ +CPG C+ +N D+ + ++ RISR++VKCP C + EL ++ H+ C ++V CP IGCE ++ DE+ HL Sbjct: 38 MRDACESACGCHYCYTCIRIYLSQNHNYCPGDKTECKEDYLNLEGDVFRNIRLSTRISRIVVKCPNIRCNYTSELLRLKEHLDKCTPESVECPCVTIGCEEEPLLKDEMAKHL 150
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: A0A0E3TX44 (TNF receptor-associated factor OS=Megalobrama amblycephala OX=75352 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.431e-13 Identity = 51/162 (31.48%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 800 HDETKENELSGVS---SEIRXXXXXXXXXXXXGIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 H+ET++N+++ + S + + + LE+++ G++ W+++NFS Q+ G+ I +S PFY+GR GYKLCL + + +C+ +++L H M+GEFD L+WPF+ ++++ V+D G + + ++ PD + +PT +RN P +V F Sbjct: 343 HNETQKNQVTELRRKLSSLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLAVLDQVEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: A0A2L0A4C2 (TNF receptor-associated factor OS=Mylopharyngodon piceus OX=75356 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.496e-13 Identity = 51/162 (31.48%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 800 HDETKENELSGVS---SEIRXXXXXXXXXXXXGIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 H+ET++N+++ + S + + + LE+++ G++ W+++NFS Q+ G+ I +S PFY+GR GYKLCL + + +C+ +++L H M+GEFD L+WPF+ ++++ V+D G + + ++ PD + +PT +RN P +V F Sbjct: 343 HNETQKNQVTELRRKLSSLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLAVLDQVEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 77.0258 bits (188), Expect = 1.112e-14 Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 G++ W+++ FS I + ++S PFY+GR GYKLCL + + +C+ +++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT +RN P +V F Sbjct: 351 GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPN---APRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 473
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 77.0258 bits (188), Expect = 1.129e-14 Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 G++ W+++ FS I + ++S PFY+GR GYKLCL + + +C+ +++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT +RN P +V F Sbjct: 375 GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPN---APRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 77.0258 bits (188), Expect = 1.129e-14 Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249 G++ W+++ FS I + ++S PFY+GR GYKLCL + + +C+ +++L H M+GEFD L+WP + ++++ V+D G + + ++ PD + +PT +RN P +V F Sbjct: 375 GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPN---APRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: ENSAMXT00000035169.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:3354744:3362219:1 gene:ENSAMXG00000029095.1 transcript:ENSAMXT00000035169.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 63.5438 bits (153), Expect = 1.171e-11 Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 G WKI+++ ++ E + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D G K + P+ + +PT E NI Sbjct: 4 GTLIWKIRDYKRRKAEAVASKTLSLYSQPFYTGYFGYKMCARV--YLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMD--QGPARKHLGDAFKPDPNSSSFRRPTGEMNI 118
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf5 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:103031120]) HSP 1 Score: 66.6254 bits (161), Expect = 2.548e-11 Identity = 62/285 (21.75%), Postives = 124/285 (43.51%), Query Frame = 2 Query: 491 NLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQL----DIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQK--IGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV--------IFVPFDSPAVKNNRLEIECRV 1297 NL ++N + ++ + A R +E+ + S +K++L D++E T ++ ++ ++L +Q + +S +E A+ Q + + Q + E + +L S + G WK+ ++ +K G + S PFY+ GYKL V L + ++ + + LMRG+FD L WPF+ +V + V+D + + S PD + + +PT+E N + + P ++ V+++ L I+ +V Sbjct: 284 NLLVSNLKREVSKCDTTVSAMQRSVEEQRELVSSVKRELKDLRDVLEADLTKEELVSLRASLDSLREQVAM------TQSLREHLGALGQTCQSHTRLLDIHVQQLQCSEQRFQQLESTSYD--------------GKLIWKVHDYHRKKEAGTALNSPPFYTSHSGYKLSARVY--LGGEGTARGTHLSLYVMLMRGDFDSLLPWPFRQNVTLAVLDQSGNRNH----VSLSFTPDLASNNFRRPTSETNAALGFPRFITHADLEAPRNAAYVRDDTLFIKVKV 542
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 64.6994 bits (156), Expect = 1.895e-11 Identity = 38/136 (27.94%), Postives = 69/136 (50.74%), Query Frame = 2 Query: 887 GIFKWKIKNFSQK----IGER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI----PINVIFVPFDSPA 1261 G WKI++++++ + R +YS+PFY+ FGY++C + L D + ++ + +MRGE+D L WPF+ V + ++D + T K P + +PT++ NI P+ V V +S + Sbjct: 325 GKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMC--ARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLDQGAARRQLSDTFKPD--PASSSFRRPTSDMNIASGCPLFVSHVALESAS 456
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 60.077 bits (144), Expect = 4.130e-10 Identity = 35/133 (26.32%), Postives = 66/133 (49.62%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI----PINVIFVPFD 1252 G WKI++++++ E +YS+PFY+ FGYK+C + L D + ++ + +MRGE+D L WPF+ V + ++D G + + ++ P + +P + N+ P+ V V + Sbjct: 268 GKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMC--ARAYLNGDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLLD--QGAARRHLSDTFTPDPASGSFRRPDGDMNVASGCPLFVSHVALE 396
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 59.3066 bits (142), Expect = 1.044e-9 Identity = 44/184 (23.91%), Postives = 80/184 (43.48%), Query Frame = 2 Query: 773 VKLEYHQWKHDETKENELSGVSSE-------IRXXXXXXXXXXXXGIFKWKIKNFSQKIG-----------------ERIYSKPFYSGRFGYKLCLG--------VTSELAKDYLVY---QCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERN 1219 V L+ HQ + K + G+ +E + ES +GIF W+++ FS+ + ++S FY+G GY+LCL V + A ++ Q ++ + +HL++G++D L WPFK ++I V+D + + +D P + +P+ RN Sbjct: 348 VVLQLHQIRELSAKTDNQQGLLAEATRLVRSLEARVAESESRLCAGIFTWRVERFSRLLPGGLASGFASDGMHPDAPAVMHSSGFYTGVPGYRLCLRLQVLSGREVPAGAASPSVLLAGRQPHLALFVHLLQGDYDHRLPWPFKGRIRISVVDQCERDSVHVTEMMDAD-PQLSAFQRPSVHRN 530
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO35237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM27]) HSP 1 Score: 73.1738 bits (178), Expect = 7.045e-14 Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSE---LAKD-YLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGF 1141 G F WKI F+++ E IYS PFY+ RFGYKLC + A+D YL ++F+ L MRGE+D L WPF+ ++ I +ID +NG Sbjct: 380 GTFLWKIDKFTERYAEAKSGNATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYL----SIFIAL--MRGEYDSILPWPFQETITITLIDQDNGM 469
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO49464 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG36]) HSP 1 Score: 69.707 bits (169), Expect = 9.449e-13 Identity = 83/359 (23.12%), Postives = 158/359 (44.01%), Query Frame = 2 Query: 227 IEHHIKTCDKQTVSCPF-NAIGCETNEVMHDEIN----DHLNVS---NYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQ-QLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTN-----IESYKEIGEAIPAKFQQQIGG-VKLEYHQWKHD-ETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSEN----GFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 +E H++TC+K V CP A G +E++H + N L S + H K E + + S+ + + E +++ + + + QQE++ E RE + +N + Q +L++IE Q++E+ ++++ +++ + + + IE+ G A P+ +GG + LE Q +++ + +++ +++ S + G + WKI ++++ E IYS PFY GR+GYK C V D + ++ + LMRGEFD L WPF+ V ++D + G T++ P + +PT+ NI Sbjct: 154 MEDHLQTCEKHPVVCPHCGAEGICRDELLHHQTNICEQAELPCSFAKHGCHFKGTREALETHFRDQASVHVNLLLTATQNEEKARSEM-AAKLSQMEKERAKQQEQMYEQ--------REALAVANQNLRTYQGKLNVIERSVAEQRRELAELKERIQLQEVEAAIREQDRRLGMIENEASRG-AAPSSGPGSMGGTMALERRQDRNEHQLALHDIQLAEHDLKLQMLEATSYD--GTYIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYPN--GDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLLDQDRVHDIGDTFRPD-------PTSSSFKRPTSNMNI 491
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO48773 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI91]) HSP 1 Score: 60.4622 bits (145), Expect = 6.203e-10 Identity = 34/121 (28.10%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 887 GIFKWKIKNFSQ-------KIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYK---TKTIKYSDCPDDDGWGKPTTERN 1219 G F WK+ NF Q + I+S PFY+ +GYK+CL + L ++F+ H+M+G++D L WPF + + ++D + + ++T+ P+ + +PT+ RN Sbjct: 332 GTFIWKLDNFRQCREGSIAGLTAAIHSPPFYTSMYGYKMCLRMNLNGVDGGLGEHVSLFI--HMMQGDWDGILEWPFIGRITLSILDQSDQIDSRRPISETLVAK--PNLLAFQRPTSPRN 448
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO40665 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6K0]) HSP 1 Score: 58.5362 bits (140), Expect = 2.465e-9 Identity = 38/123 (30.89%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 887 GIFKWKIKNFSQ--------KIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLH--LMRGEFDENLAWPFKNSVKIDVIDSENGFTYK-TKTIKYSDCPDDDGWGKPTTERNI 1222 G F WKI N++Q K E++ S PFY+G++GYKL +E + L ++L+ +M+G++D L WPF+ V +ID ++ FT + KT + + + D +G+P +++ Sbjct: 229 GKFLWKISNYTQLFQQSATKKEKEKLCSPPFYTGQYGYKL----RAEAFLNGLGQGKGTHLSLYVVIMKGDYDSVLPWPFQQRVDFILIDQDDDFTSRQNKTWRLTCDRNSDYFGRPNKAKSL 347
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO38873 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBN4]) HSP 1 Score: 54.6842 bits (130), Expect = 4.540e-8 Identity = 35/118 (29.66%), Postives = 54/118 (45.76%), Query Frame = 2 Query: 890 IFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 + WKI N + K E YS F++G GYK+C + L D + +V + +MRGEFD L WPF+ V + ++D +N + + P + +P E NI Sbjct: 334 VLLWKITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIY--LNGDGMGRNHHVSLFFVIMRGEFDALLRWPFRQKVTLMLLDQDN---VEHVIDAFRPDPSSSSFQRPRAEMNI 446
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:101161132]) HSP 1 Score: 72.0182 bits (175), Expect = 5.070e-13 Identity = 48/154 (31.17%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRVV 1300 GIF W++K FS Q+ G + +S FY+GR GYKLCL + + +C+ F++L H M+G FD L WPF+ ++++ ++D + + ++ PD + KP +RN P +V F VK++ L I C V Sbjct: 396 GIFIWRLKAFSTHLRSQEAGIPVVEHSPGFYTGRPGYKLCLRLHLQTPT---APRCSNFISLFVHTMQGVFDSQLTWPFQGTIRLAILDQGPEGQHHMEVMETK--PDLQAFQKPINQRN-PKGFGYVTFMHRSLLSQRAYVKDDTLLIRCEVT 543
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: ENSORLT00000020861.2 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101167626]) HSP 1 Score: 62.3882 bits (150), Expect = 4.549e-10 Identity = 98/448 (21.88%), Postives = 185/448 (41.29%), Query Frame = 2 Query: 74 NYKFCPGATKNCQI---------INYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENS----------QIKQQLD-----IIELKSTNQQQEMIKMEKENL--IKQSKIFSEKTNIESY-------KEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKI-------GERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV-IFVPFDSPAVKNNRLEIE 1288 N + CP T NC+ I ++I +P+ + C ++ ++ +D HIK C K C F+ +GC+T+ V ++I+DH +Y H+ LLL I ++ +ES++ + + ++ +Q+ + ++ L + + ++ ++GR A + + S ++ QL + EL Q+ E+ EN+ I ++ +E+Y ++ E + K +Q V L E K ++S + + GIF WKI +F++K ++S FY+ ++GYK+CL + L D ++ + +MRG D L WPF V + ++D N + I + PD + +P ++ NI +F P KN+ + E Sbjct: 153 NERECPERTLNCKYCKEPFLLKNIKAHDEICPKYPM------MCEGCAKKKIPREKYVD----HIKFCSKFKAPCRFHVVGCDTS-VEKEKIHDHERQCSYEHLNLLLHFIMGIKVSLESLQPQRL------------EVASQKLHELHQSLRDLELRMSQLGRSGTAPLQGVCAATLATSFTPLHSAMGAALELQLQSEKTKVAELSRRCQELELKVSTFENIVCILNRELERSCATMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMEGKMKDMSAATYD--------------GIFIWKISDFTKKRQDAMAGRAPAMFSPAFYTSKYGYKMCLRIY--LNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN-----REHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDE 556
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601]) HSP 1 Score: 62.003 bits (149), Expect = 5.299e-10 Identity = 37/119 (31.09%), Postives = 60/119 (50.42%), Query Frame = 2 Query: 887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222 G WKI+++ ++ + + YS+PFY+G FGYK+C V L D + ++ + +MRGE+D L WPFK V + ++D G + K + P + +P E NI Sbjct: 298 GTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMD--QGPSRKHLGDAFKPDPSSSSFRRPVAEMNI 412
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: ENSORLT00000001369.2 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:101170323]) HSP 1 Score: 56.9954 bits (136), Expect = 2.346e-8 Identity = 37/130 (28.46%), Postives = 63/130 (48.46%), Query Frame = 2 Query: 887 GIFKWKIKNF-----SQKIGER--IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDS 1255 G WKIK+F ++ G+ + S PF++GR GYK+ + + L D ++ + + LM G+FD L WPFK +V + V+D +++ + P + + +P E + V F F S Sbjct: 428 GRLIWKIKDFQKRREAEATGQHPCLSSVPFHTGRCGYKM--AMKAYLNGDGEGRGTHLSLYVVLMPGDFDALLPWPFKQTVSLSVLDQSGARNHQSFNFRPD--PTNTCFHQPAAESASNVAVGFPCFIS 553
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: unm_sa808 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101155367]) HSP 1 Score: 56.225 bits (134), Expect = 4.408e-8 Identity = 65/272 (23.90%), Postives = 114/272 (41.91%), Query Frame = 2 Query: 488 INLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQK----IGER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV-IFVPFDSPAVKNN 1273 + LQL +++ K+ E+GRR E++ EN ++ +T ME N +Q K+ +K EA+ K +Q V L+ E + E++ + + G+F W+I +F++K + R ++S FY+ ++GYK+CL + L D ++ + +MRG D L WPF V + ++D N + I + PD + +P +E NI +F P KN+ Sbjct: 349 LELQLHSEKTKVAELGRR--CTELEVKSGTFENVVCVLNREVERFTTT--------MEASN--RQHKLDQDKI---------EALSNKVRQLERTVGLKDLTVAEMEGRLREMAATTFD--------------GVFIWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIY--LNGDGTGRGTHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSN-----REHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNS 578
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000015050.1 (SMESG000015050.1) HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV 1300 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKLLLELINNLRNEMESMKNENIELRNEILELRGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRKLEKYLESEEESGIFKWKIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV Sbjct: 33 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKLLLELINNLRNEMESMKNENIELRNEILELRGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRKLEKYLESEEESGIFKWKIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV 465
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000014887.1 (SMESG000014887.1) HSP 1 Score: 320.087 bits (819), Expect = 5.172e-105 Identity = 197/444 (44.37%), Postives = 278/444 (62.61%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQ--IINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXX-XXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDL-------KRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGE-RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV 1300 MI ACN PC C FCS+CIEHYL+GN KFCPG TKNC+ +IN+ NDI DW I+IRIS +V CPR+NC+FKE L +IE+HI+TC KQ++ CPFN IGCE NEVM+DE+ HLN NY + KLL++LINNLRNEMES+K E I N+ FN+QF NI L+ TNQQEK+ EM R+E N +IEDL K EN +K+++ I ++S N+ ++ I+M I KF + I ++ ++ + K + K + +SEIR + + + G+ +WKI+N +++ E IYS+PFYS FGY + L V Y+ + + V+ HLM G+FD+ L WPF+++V +DVIDSENG ++T +YSDC + GWGKP++ RN I++ +P SP +KNN+L ++CR++ Sbjct: 33 MIKACNTPCGCIFCSECIEHYLNGNDKFCPGTTKNCRKKLINFVNDIKFDWSIDIRISETVVNCPRQNCEFKERLGMIENHIRTCYKQSILCPFNVIGCEINEVMNDEMKAHLNEDNYCNSKLLIDLINNLRNEMESLKKEIIELRNENIELKIDNRKFNKQFDNIWLRSTNQQEKMCEMERKESENREQIEDLIEEIVATKSENRSMKEEIKIA-VESINETRQHIEM-----------------------IQTKSKQKFDELIQNIEQQHEENKKLQVK---MERCTSEIR-IIQTKLGNDNLGLLEWKIENVTEQECETEIYSRPFYSEPFGYTMNLIV-------YIESEGEIGVSFHLMPGKFDDKLEWPFRHAVTLDVIDSENGNVCHSQTKRYSDCTNTAGWGKPSSNRNSRIHMTTLPITSPLIKNNQLLVKCRLL 441
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000000559.1 (SMESG000000559.1) HSP 1 Score: 320.857 bits (821), Expect = 2.104e-104 Identity = 214/486 (44.03%), Postives = 280/486 (57.61%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQ--IINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXX--------XXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIE----------------------------DLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEI--GEAIP-----AKFQQQIGGVKL--EYHQWKHDETKENELSGVSSEIRXXXXX--XXXXXXXGIFKWKIKNFSQ-KIGERIYSKPFYSGRFGYKLCLGV-TSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCP---DDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRV 1297 MI AC+APC CRFCSDCI+HYLDGN KFCPG T+ CQ +INYANDI DWP NIRIS ++V CPR+NC+F +EL +IE+H +TCDK+++SCPFNAIGC NE+ ++E+ HLN Y H KLL+ELINNLRNEMESMK EN E+RN N+ F QQ NI Q NQQ+K+ EM +E+ NT EIE LKRE SQ KQQ IEL+ TNQQQ+M +ME + + +I E + + E I +KF+QQI K E HQ + + +NE+ ++EIR ++ GI W+I SQ + + IYSKPFYSG GYK+CL V + LVY HLMRG+ D L WPFK +VK+D I+ +G Y ++++K D P GWG+P +RN PI A+KN++L ++CR+ Sbjct: 33 MIKACHAPCGCRFCSDCIQHYLDGNDKFCPGTTRYCQNRMINYANDIAIDWPFNIRISEIVVNCPRQNCEFNDELQMIENHTRTCDKRSISCPFNAIGCGMNEIRNEEMKSHLNEEIYCHSKLLIELINNLRNEMESMKRENTEMRNYNIELRNDIIELRNANEQFKQQIDNIERQFINQQQKMCEMEAKEQENTAEIEQLNEEMVVIKNANRALQDEMIELRNDNIQLKREISQSKQQNQNIELQLTNQQQKMCEMEAKEQENRGEINEEIAAVNNANRALQNEMIELRREISKFKQQIDAFKQISEQHQLQQNIKIQNEMEKCANEIRLIQTKFGNAEFINFGILDWQIDKLSQLERKKSIYSKPFYSGPGGYKMCLAVIIRDFGGAILVY-------FHLMRGDCDAGLEWPFKYAVKVDAINPADGNVYSSQSVKCPDSPAAAAAAGWGRPARDRNDPICYYITKL--SAIKNDKLLLKCRI 509
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000049688.1 (SMESG000049688.1) HSP 1 Score: 310.457 bits (794), Expect = 1.815e-100 Identity = 206/486 (42.39%), Postives = 284/486 (58.44%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQI--INYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKX-XXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIE---------------------DLKRENSQIKQQLDIIELKSTNQQQEMIKM---EKEN-------------LIKQSKIFSEK--TNIESYKEIG---EAIPAKFQQQIGGVK--LEYHQWKHDETKENELSGVSSEIRXXXXX--XXXXXXXGIFKWKIKNFS-QKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVK----NNRLEIECRV 1297 MI ACNAPC CRFCSDCI+ YL+ N KFCPG K CQ+ IN+ ++ D N+RIS +IVKCPR+NC+ K EL ++E H++TCDK+ +SCPFN+IGCE NE+ ++E+N HLN SNY H KL+++L NN RNEMES+KN + N+ Q NI Q TNQ +K+ EM ++ N EI+ +L+REN + KQQ+D I+ STNQQQ+M +M E+EN L +++ S + TN E+ +I E I QQQ +K E Q + ++ + E+ ++EIR+++ E +SGIF+W+I S Q+ IYSKPFYS FGYK+CL V DY ++V HL+RG+FD NL WPFK SVKID IDS NG + ++KYSDC D GW KP ++RN PI + DS ++K NN+L + C++ Sbjct: 26 MIKACNAPCGCRFCSDCIDQYLNQNDKFCPGEAKYCQVQKINFTRNVSEDHTANLRISEVIVKCPRQNCETKTELSMMEEHMRTCDKRPISCPFNSIGCEMNEIANEEMNAHLNESNYWHSKLIIDLFNNFRNEMESLKNGNMELRNEMTELKKKNRQSKHQIDNIEFQSTNQYQKMSEMEAKQLENAEEIKKINKEIVAVKKENESLREEMTELRRENREFKQQIDNIQSLSTNQQQKMGEMEAREQENAGEIELLNEEMVVLKNENRSMSSQMETNAEAINQIRMQIERIEINSQQQSDALKQNCEQLQLQANKNFQLEMEKCANEIRQIQSIFGDEDFMKSGIFEWEINKISEQRRNALIYSKPFYSVPFGYKMCLAV---FIWDY------IYVYFHLLRGDFDNNLEWPFKYSVKIDAIDSANGNIIHSSSVKYSDCSDVAGWRKPASDRNDPIRIYNYDCDSISIKSAAINNKLLLRCKI 502
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000049567.1 (SMESG000049567.1) HSP 1 Score: 309.686 bits (792), Expect = 2.339e-100 Identity = 206/484 (42.56%), Postives = 284/484 (58.68%), Query Frame = 2 Query: 2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQI--INYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXX-XXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIE---------------------DLKRENSQIKQQLDIIELKSTNQQQEMIKM---EKEN-----LIKQSKIFSE----------KTNIESYKEIG---EAIPAKFQQQIGGVK--LEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFS-QKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVK----NNRLEIECRV 1297 MI AC+ PC CRFCSDCIE YL+ KFCPG K CQ+ IN+ ++ D P NIRIS +IVKCP +NC+ K EL ++E HI+TCDK+ +SCPF +IGCE NE+ ++EIN HLN SNY H KL+++LINN RNEMES+KNEN+E + N+ QQ NI Q TNQ +K+ EM ++ N EI+ +L+REN + KQQ+D I+ STNQQQ+M +M E+EN L+ + + + +TN E+ +I E I QQQ +K E Q + ++ + E+ ++EIR+++ F+W+I S Q+ E IYSKPFYSG FGYK+CL V ++ ++ V +LMRG+FD NL WPFK V +DVIDS NG +K++KYSDCPD GW KP +RN PI + DS ++K NN+L + C++ Sbjct: 26 MIKACHTPCGCRFCSDCIEQYLNETDKFCPGEAKYCQVQKINFTRNVSEDHPTNIRISEVIVKCPTQNCETKTELSMMEEHIRTCDKRPISCPFISIGCEINEIANEEINAHLNESNYWHSKLIIDLINNFRNEMESLKNENMELRNEMTELKKKNRQSKQQIDNIEFQSTNQYQKMSEMEAKQLENAEEIKKINKEIVAVKKENESLREEMTELRRENREFKQQIDNIQSLSTNQQQKMGEMEAREQENAGEIELLNEEMVVLKNEYRSMSSQMETNAEAINQIRMQIERIEINSQQQSDALKQNFEQQQLQANKNFQLEMEKCANEIRQIQST--------FFEWEIDKISEQRRNELIYSKPFYSGPFGYKMCLAV-------FIWGDGDIGVYFYLMRGDFDNNLEWPFKYEVAVDVIDSANGNIIHSKSVKYSDCPDAAGWRKPARDRNDPIRIYNYDCDSISIKSAAINNKLLLNCKI 494 The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of TNF receptor-associated factor 6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of TNF receptor-associated factor 6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30033001 ID=SMED30033001|Name=TNF receptor-associated factor 6|organism=Schmidtea mediterranea sexual|type=transcript|length=1397bpback to top protein sequence of SMED30033001-orf-1 >SMED30033001-orf-1 ID=SMED30033001-orf-1|Name=SMED30033001-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=437bp MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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