TNF receptor-associated factor 6

Overview
NameTNF receptor-associated factor 6
Smed IDSMED30033001
Length (bp)1397
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of TNF receptor-associated factor 6 (SMED30033001) t-SNE clustered cells

Violin plots show distribution of expression levels for TNF receptor-associated factor 6 (SMED30033001) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of TNF receptor-associated factor 6 (SMED30033001) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for TNF receptor-associated factor 6 (SMED30033001) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30033001

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30033001h1SMcG0019566 SmedASXL_010436SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30033001h1SMcG0019566 SmedASXL_010436SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30033001h1SMcG0019566 SmedASXL_010437SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30033001h1SMcG0019566 SmedASXL_010437SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033])

HSP 1 Score: 69.3218 bits (168), Expect = 5.949e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  391 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 513          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033])

HSP 1 Score: 69.3218 bits (168), Expect = 5.949e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  391 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 513          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033])

HSP 1 Score: 68.9366 bits (167), Expect = 6.400e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  333 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 455          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033])

HSP 1 Score: 69.3218 bits (168), Expect = 6.933e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  416 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 538          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033])

HSP 1 Score: 69.3218 bits (168), Expect = 6.933e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  416 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 538          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Celegans
Match: trf-1 (TNF Receptor Associated Factor (TRAF) homolog; TRF-1 [Source:UniProtKB/TrEMBL;Acc:G5EG80])

HSP 1 Score: 55.8398 bits (133), Expect = 3.763e-8
Identity = 33/88 (37.50%), Postives = 44/88 (50.00%), Query Frame = 2
Query:  899 WKIKNFSQKIGER-------IYSKPFYSGRFGYKL----CL-GVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVID 1126
            WKI    Q+  E        I+S PF S RFGYK+    CL G  S   K   +Y       + L++GEFD  L WPF  ++KI ++D
Sbjct:  267 WKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLY-------VLLLKGEFDPTLEWPFHRAIKISLLD 347          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Celegans
Match: trf-2 (TNF Receptor Associated Factor (TRAF) homolog [Source:UniProtKB/TrEMBL;Acc:Q9N586])

HSP 1 Score: 51.6026 bits (122), Expect = 6.612e-7
Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 2
Query:  905 IKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD 1183
            +K    K    IYS+PFYS  +GYK+ + V +    D L ++    V + LM+GE+D+ L WPF+  V   ++ S++     TKTI  ++ P+
Sbjct:  172 VKATKNKSHRSIYSQPFYSHGYGYKM-MAVAAPYG-DGLAFREYFSVFVCLMKGEWDDILEWPFRCDVTFSIL-SDDKKELLTKTIYVNEMPE 261          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf3 (TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257])

HSP 1 Score: 81.2629 bits (199), Expect = 5.555e-16
Identity = 78/366 (21.31%), Postives = 159/366 (43.44%), Query Frame = 2
Query:  179 VKCPRENCQFKEEL-DLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKE-NLIKQSKIFSE-----KTNIESYKEIGEAIPAKFQQQIGG----VKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            V CP  +C F   L   +  H   C K  V+C F   GC + + ++ E+ +H +     H++++                              N     +  ++  +L  + + +  +  R     R+ E+++ +N Q++Q+L  +++  ++  ++++++E E   ++  +   E     + ++ES + +  ++ +       G      LE    +HD+        ++ E+    + LE+   +G   WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D   G   K     +   P    + +PT E NI
Sbjct:  204 VACP-NHCSFSSILRSELSSHQHDCPKAQVTCSFIRYGC-SYKGLNQEMREHESSFASEHLRMMAVR---------------------------NTTLEAKVEDVKSELMERYKVLPSLSSRLAEVERQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRAMREEVETLRGSVESMRSMVSSLDSSCVNSASGSHTLASLEQQLTRHDDLMSVHDVRLA-EMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTLMLMD--QGPARKHLGDAFKPDPSSSSFRRPTGEMNI 535          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561])

HSP 1 Score: 79.7221 bits (195), Expect = 1.619e-15
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            GI+ W+++NFS     Q+ G+ I  +S PFY+GR GYKLCL +  +        +C+ F++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT  RN P    +V F
Sbjct:  375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561])

HSP 1 Score: 79.7221 bits (195), Expect = 1.619e-15
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            GI+ W+++NFS     Q+ G+ I  +S PFY+GR GYKLCL +  +        +C+ F++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT  RN P    +V F
Sbjct:  375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561])

HSP 1 Score: 79.7221 bits (195), Expect = 1.619e-15
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            GI+ W+++NFS     Q+ G+ I  +S PFY+GR GYKLCL +  +        +C+ F++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT  RN P    +V F
Sbjct:  375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Match: traf5 (Tnf receptor-associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-071120-3])

HSP 1 Score: 60.4622 bits (145), Expect = 8.439e-10
Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 2
Query:  887 GIFKWKIKNF--SQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNI---------------PINVIFV 1243
            G   WK++++   ++ G  + S PFY+ R GYKL   V + L  D      ++ + + +MRG+FD  L WPF+ ++ + ++D      + + T      PD   D + +PT++ N+               P N +FV
Sbjct:  111 GKLIWKVRDYWHRKESGAALSSSPFYTSRSGYKL--SVRAYLGGDGSGRGSHMSLYITIMRGDFDSFLPWPFRQNITLTLLDQSGTRNHMSHTF----IPDVNSDSFHRPTSDANVATGFTRFISHCDLENPRNAVFV 242          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: egf (epidermal growth factor [Source:Xenbase;Acc:XB-GENE-951823])

HSP 1 Score: 73.1738 bits (178), Expect = 2.971e-13
Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIG----ER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRVV 1300
            GIF W+I NF+  +     ER   I+S+ FY+G+ GYKLCL +  +L       +C  +++L  H M+GE+D  L WP + ++++ ++D   G   + +       P+   + +PT  RN P    +V F           VKN+ L + C V 
Sbjct:  387 GIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPS---AQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPTVARN-PKGFGYVTFMHLQALKQRQYVKNDTLLVRCSVT 536          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093])

HSP 1 Score: 72.4034 bits (176), Expect = 5.549e-13
Identity = 99/435 (22.76%), Postives = 181/435 (41.61%), Query Frame = 2
Query:   38 FCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKE-ELDLIEHHIKTCD--------------------KQTVSCPFNAIGCE---------TNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKL--FNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKE-NELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            F  +C    +     FC   T+ C+ +    ++L     + +   L   CPR +C+ K    DL +H  KTC                      + V CP   I C           +E  + +I  H   S   H+ L+ E  N L  ++ SM       +N+ +++  N++  F  +      QL N + +I+++ R  +    +++DL +E   ++Q  D  +   +N +        +N + Q ++ ++  N  S+       P   + QI          +HD+    +++     ++R       S    G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D   G + +     +   P+   + KPT E NI
Sbjct:   96 FKDNCCRREVLALQMFCRNETRGCKELITLGNLLIHLKSDCQFEEL--SCPRADCKEKVIRKDLSDHIEKTCKYRETPCKFCRNQVPLVEMQKHEDVDCPSVVISCPHMCSVKSLLRSEGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKV-SMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYE------SLQNRLSQLEVMAK--NAASWN------PGVLETQIN---------RHDQMLSVHDIRLADMDLRFQVLETASYN--GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMD--QGPSRRHLGDAFKPDPNSSSFKKPTGEMNI 498          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093])

HSP 1 Score: 71.633 bits (174), Expect = 8.932e-13
Identity = 86/361 (23.82%), Postives = 161/361 (44.60%), Query Frame = 2
Query:  173 LIVKCPRENCQFKEEL-DLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKL--FNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKE-NELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            +++ CP   C  K  L   +  H+  C     +C F   GC T +  + +I  H   S   H+ L+ E  N L  ++ SM       +N+ +++  N++  F  +      QL N + +I+++ R  +    +++DL +E   ++Q  D  +   +N +        +N + Q ++ ++  N  S+       P   + QI          +HD+    +++     ++R       S    G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D   G + +     +   P+   + KPT E NI
Sbjct:  195 VVISCP-HMCSVKSLLRSELNAHLLECVNAPSTCSFKRYGC-TFKGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKV-SMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYE------SLQNRLSQLEVMAK--NAASWN------PGVLETQIN---------RHDQMLSVHDIRLADMDLRFQVLETASYN--GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMD--QGPSRRHLGDAFKPDPNSSSFKKPTGEMNI 523          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: hspb6 (heat shock protein family B (small) member 6 [Source:Xenbase;Acc:XB-GENE-876273])

HSP 1 Score: 56.225 bits (134), Expect = 5.272e-8
Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSEN 1135
            G+F WKI + + K  + +       YS  FY+ ++GYK+CL +   L  D      +V +   +M+GE+D  L WPFK+ V   ++D  N
Sbjct:  230 GVFLWKISDLTNKSHDAVTGRAISLYSPAFYTAKYGYKVCLRI--YLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTFVLVDHNN 317          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Match: sytl2 (synaptotagmin like 2 [Source:Xenbase;Acc:XB-GENE-945155])

HSP 1 Score: 53.1434 bits (126), Expect = 5.928e-7
Identity = 36/120 (30.00%), Postives = 60/120 (50.00%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDD--GWGKPTTERN 1219
            G+  WKI ++S+K+ E         +S PFY+ ++GYKL   V++ L  +       + V + ++ GE+D  L WPF   V   ++D  +    K + I  +  PD +   + KPT  RN
Sbjct:  308 GVLIWKISDYSRKVQEAKVRGNFESFSPPFYTHKYGYKL--QVSAFLNGNGSGEGSYLSVYIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFNPDPNWKNFQKPTGSRN 425          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf6 (TNF receptor-associated factor 6 [Source:MGI Symbol;Acc:MGI:108072])

HSP 1 Score: 72.4034 bits (176), Expect = 4.382e-13
Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297
            GI+ WKI NF   +  +       I+S  FY+GR GYKLC+ +  +L       +C  +++L  H M+GE+D +L WPF+ ++++ ++D       +         P+   + +PT  RN P    +V F           +K++ L + C V
Sbjct:  359 GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEALIRQNHEEVMDAKPELLAFQRPTIPRN-PKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041])

HSP 1 Score: 69.3218 bits (168), Expect = 3.701e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  390 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 512          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041])

HSP 1 Score: 69.3218 bits (168), Expect = 3.701e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  390 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 512          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041])

HSP 1 Score: 69.3218 bits (168), Expect = 4.165e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINV-IFV 1243
            G+  WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D  +   +     K    P+   + KPT E NI     +FV
Sbjct:  415 GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFV 537          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Match: Traf1 (TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836])

HSP 1 Score: 61.6178 bits (148), Expect = 7.794e-10
Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV-IFVPFD---SPA---VKNNRLEIECRV 1297
            G F WKI N +++  E +       +S  FY+ ++GYKLCL +   L  D    + ++ + + +MRGE+D  L WPF+N V   ++D +N   +     +    PD     + +P +E N+     +F P     SP    VK++ + ++C V
Sbjct:  260 GTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLY--LNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD-QNNREHAIDAFR----PDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIV 405          
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|Q6IWL4|TRAF6_DANRE (TNF receptor-associated factor 6 OS=Danio rerio OX=7955 GN=traf6 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.222e-14
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            GI+ W+++NFS     Q+ G+ I  +S PFY+GR GYKLCL +  +        +C+ F++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT  RN P    +V F
Sbjct:  375 GIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEG-QHHIEVMETK--PDLQAFQRPTVMRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|Q6DJN2|TRF6B_XENLA (TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.539e-14
Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 2
Query:  887 GIFKWKIKNFS--QKIGER-----IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297
            G+F WKIK FS  QK  E      I+S  FY+G+ GYKLCL +  +L       +C  +++L  H M+GE+D  L WP   ++++ ++D   G   + +       PD   + +PTT+RN P    +V F           VKN+ L + C V
Sbjct:  385 GVFIWKIKGFSGLQKTQEEEKPVVIHSPGFYTGKPGYKLCLRLHLQLPS---AQRCANYISLFVHTMQGEYDSLLPWPLHGTIRLSILDQSEGAIIQDQEEVMDTKPDLLAFQRPTTQRN-PKGFGYVTFMHLNTLKQRQYVKNDTLFVRCAV 533          
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|Q28DL4|TRAF6_XENTR (TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.719e-12
Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIG----ER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRVV 1300
            GIF W+I NF+  +     ER   I+S+ FY+G+ GYKLCL +  +L       +C  +++L  H M+GE+D  L WP + ++++ ++D   G   + +       P+   + +PT  RN P    +V F           VKN+ L + C V 
Sbjct:  387 GIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPS---AQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPTVARN-PKGFGYVTFMHLQALKQRQYVKNDTLLVRCSVT 536          
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|P70196|TRAF6_MOUSE (TNF receptor-associated factor 6 OS=Mus musculus OX=10090 GN=Traf6 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.065e-12
Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297
            GI+ WKI NF   +  +       I+S  FY+GR GYKLC+ +  +L       +C  +++L  H M+GE+D +L WPF+ ++++ ++D       +         P+   + +PT  RN P    +V F           +K++ L + C V
Sbjct:  359 GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEALIRQNHEEVMDAKPELLAFQRPTIPRN-PKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507          
BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Match: sp|B5DF45|TRAF6_RAT (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.449e-12
Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297
            GI+ WKI NF   +  +       I+S  FY+GR GYKLC+ +  +L       +C  +++L  H M+GE+D +L WPF+ ++++ ++D       +         P+   + +PT  RN P    +V F           +K++ L + C V
Sbjct:  359 GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRN-PKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507          
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: I1ZID8 (TNF receptor associated factor-2 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.720e-18
Identity = 43/122 (35.25%), Postives = 72/122 (59.02%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNC--QIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIK 361
            ++NAC + C CRFCS CI  Y+     +CPG T  C  + +   ++I TD+ +N +I+++ VKCP E C+   EL  IE H++ C  ++ +CPF  +GC   +++  ++ +HL    + H K
Sbjct:   34 LVNACQSRCGCRFCSKCIMEYVSRGNLYCPGGTSECKEENLTICSNIHTDYRVNRKIAKMRVKCPEETCKVYCELVDIEEHLRLCTMKSQNCPFFVLGCNQPKMVIQDLTNHLQNGTFQHSK 155          
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: F6S636 (TNF receptor-associated factor OS=Ornithorhynchus anatinus OX=9258 GN=TRAF6 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.326e-16
Identity = 99/455 (21.76%), Postives = 186/455 (40.88%), Query Frame = 2
Query:   11 ACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQF---YNINLQLTNQQEKILEMGRREKANTREI-----EDLKRENSQIKQQLDIIELKSTNQ--QQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRV 1297
            A   PC  RFC  CI   +      CP   +    I   N +  D      I  L+V+CP E C  K EL  +E H   CD   V CP   I  + N ++HD +         S +   L +    +       ++N  L +   E     L  +Q    Y+++             G REK    ++     +D +     + Q L  I + +     Q +++  +  +L + S  +     +++++E  + +  +  +Q   ++    + +   +   +L      +      +E+++ +GI+ WKI NF   +  +       I+S  FY+G+ GYKLC+ +  +L       +C  +++L  H M+GE+D +L WPF+ ++++ ++D       +         P+   + +PT  RN P    +V F           +K++ L + C V
Sbjct:   80 AVQTPCGHRFCKACIVKSIRDAGHKCPVDNE----ILLENQLFPDNFAKREILSLMVRCPNEGCLMKMELRQLEEHQSLCDYALVECPQCHISFQKN-ILHDHVVSECPRRQVSCVNCALSMAFEDK----EYHDQNCPLASVFCEYCSTVLIREQMPTHYDMDCPTAPIPCTFSSFGCREKMQRNQLARHLQDDTQAHMRMMAQALHSISITALTPVPQLDVLPFDPASLPRSSSGYDCHPEVQNFQETIQQLEGRLVRQDHQIRELIAKMETQSSHVVDLKRTIRTLEDKIAEMEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPN---AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDTKPELLAFQRPTIHRN-PKGFGYVTFMHLQALRQRAFIKDDTLLVRCEV 521          
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: T1E101 (TRAF-6 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.493e-16
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQ--IINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHL 334
            M +AC + C C +C  CI  YL  N+ +CPG    C+   +N   D+  +  ++ RISR++VKCP   C +  EL  ++ H+  C  ++V CP   IGCE   ++ DE+  HL
Sbjct:   38 MRDACESACGCHYCYTCIRIYLSQNHNYCPGDKTECKEDYLNLEGDVFRNIRLSTRISRIVVKCPNIRCNYTSELLRLKEHLDKCTPESVECPCVTIGCEEEPLLKDEMAKHL 150          
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: A0A0E3TX44 (TNF receptor-associated factor OS=Megalobrama amblycephala OX=75352 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.431e-13
Identity = 51/162 (31.48%), Postives = 96/162 (59.26%), Query Frame = 2
Query:  800 HDETKENELSGVS---SEIRXXXXXXXXXXXXGIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            H+ET++N+++ +    S + +  + LE+++  G++ W+++NFS     Q+ G+ I  +S PFY+GR GYKLCL +  +        +C+ +++L  H M+GEFD  L+WPF+ ++++ V+D   G  +  + ++    PD   + +PT +RN P    +V F
Sbjct:  343 HNETQKNQVTELRRKLSSLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLAVLDQVEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Match: A0A2L0A4C2 (TNF receptor-associated factor OS=Mylopharyngodon piceus OX=75356 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.496e-13
Identity = 51/162 (31.48%), Postives = 96/162 (59.26%), Query Frame = 2
Query:  800 HDETKENELSGVS---SEIRXXXXXXXXXXXXGIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            H+ET++N+++ +    S + +  + LE+++  G++ W+++NFS     Q+ G+ I  +S PFY+GR GYKLCL +  +        +C+ +++L  H M+GEFD  L+WPF+ ++++ V+D   G  +  + ++    PD   + +PT +RN P    +V F
Sbjct:  343 HNETQKNQVTELRRKLSSLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPS---APRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLAVLDQVEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325])

HSP 1 Score: 77.0258 bits (188), Expect = 1.112e-14
Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            G++ W+++ FS  I  +       ++S PFY+GR GYKLCL +  +        +C+ +++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT +RN P    +V F
Sbjct:  351 GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPN---APRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 473          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325])

HSP 1 Score: 77.0258 bits (188), Expect = 1.129e-14
Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            G++ W+++ FS  I  +       ++S PFY+GR GYKLCL +  +        +C+ +++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT +RN P    +V F
Sbjct:  375 GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPN---APRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325])

HSP 1 Score: 77.0258 bits (188), Expect = 1.129e-14
Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGER-------IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF 1249
            G++ W+++ FS  I  +       ++S PFY+GR GYKLCL +  +        +C+ +++L  H M+GEFD  L+WP + ++++ V+D   G  +  + ++    PD   + +PT +RN P    +V F
Sbjct:  375 GVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPN---APRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEG-QHHVEVMETK--PDLQAFQRPTVQRN-PKGFGYVTF 497          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: ENSAMXT00000035169.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:3354744:3362219:1 gene:ENSAMXG00000029095.1 transcript:ENSAMXT00000035169.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 63.5438 bits (153), Expect = 1.171e-11
Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            G   WKI+++ ++  E +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D   G   K     +   P+   + +PT E NI
Sbjct:    4 GTLIWKIRDYKRRKAEAVASKTLSLYSQPFYTGYFGYKMCARV--YLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMD--QGPARKHLGDAFKPDPNSSSFRRPTGEMNI 118          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Match: traf5 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:103031120])

HSP 1 Score: 66.6254 bits (161), Expect = 2.548e-11
Identity = 62/285 (21.75%), Postives = 124/285 (43.51%), Query Frame = 2
Query:  491 NLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQL----DIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQK--IGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV--------IFVPFDSPAVKNNRLEIECRV 1297
            NL ++N + ++ +      A  R +E+ +   S +K++L    D++E   T ++   ++   ++L +Q  +       +S +E   A+    Q     + +   Q +  E +  +L   S +              G   WK+ ++ +K   G  + S PFY+   GYKL   V   L  +      ++ + + LMRG+FD  L WPF+ +V + V+D      +    +  S  PD   + + +PT+E N  +          +  P ++  V+++ L I+ +V
Sbjct:  284 NLLVSNLKREVSKCDTTVSAMQRSVEEQRELVSSVKRELKDLRDVLEADLTKEELVSLRASLDSLREQVAM------TQSLREHLGALGQTCQSHTRLLDIHVQQLQCSEQRFQQLESTSYD--------------GKLIWKVHDYHRKKEAGTALNSPPFYTSHSGYKLSARVY--LGGEGTARGTHLSLYVMLMRGDFDSLLPWPFRQNVTLAVLDQSGNRNH----VSLSFTPDLASNNFRRPTSETNAALGFPRFITHADLEAPRNAAYVRDDTLFIKVKV 542          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 64.6994 bits (156), Expect = 1.895e-11
Identity = 38/136 (27.94%), Postives = 69/136 (50.74%), Query Frame = 2
Query:  887 GIFKWKIKNFSQK----IGER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI----PINVIFVPFDSPA 1261
            G   WKI++++++    +  R   +YS+PFY+  FGY++C    + L  D +    ++ +   +MRGE+D  L WPF+  V + ++D        + T K    P    + +PT++ NI    P+ V  V  +S +
Sbjct:  325 GKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMC--ARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLDQGAARRQLSDTFKPD--PASSSFRRPTSDMNIASGCPLFVSHVALESAS 456          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 60.077 bits (144), Expect = 4.130e-10
Identity = 35/133 (26.32%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI----PINVIFVPFD 1252
            G   WKI++++++  E        +YS+PFY+  FGYK+C    + L  D +    ++ +   +MRGE+D  L WPF+  V + ++D   G   +  +  ++  P    + +P  + N+    P+ V  V  +
Sbjct:  268 GKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMC--ARAYLNGDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLLD--QGAARRHLSDTFTPDPASGSFRRPDGDMNVASGCPLFVSHVALE 396          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561])

HSP 1 Score: 59.3066 bits (142), Expect = 1.044e-9
Identity = 44/184 (23.91%), Postives = 80/184 (43.48%), Query Frame = 2
Query:  773 VKLEYHQWKHDETKENELSGVSSE-------IRXXXXXXXXXXXXGIFKWKIKNFSQKIG-----------------ERIYSKPFYSGRFGYKLCLG--------VTSELAKDYLVY---QCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERN 1219
            V L+ HQ +    K +   G+ +E       +       ES   +GIF W+++ FS+ +                    ++S  FY+G  GY+LCL         V +  A   ++    Q ++ + +HL++G++D  L WPFK  ++I V+D     +     +  +D P    + +P+  RN
Sbjct:  348 VVLQLHQIRELSAKTDNQQGLLAEATRLVRSLEARVAESESRLCAGIFTWRVERFSRLLPGGLASGFASDGMHPDAPAVMHSSGFYTGVPGYRLCLRLQVLSGREVPAGAASPSVLLAGRQPHLALFVHLLQGDYDHRLPWPFKGRIRISVVDQCERDSVHVTEMMDAD-PQLSAFQRPSVHRN 530          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO35237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM27])

HSP 1 Score: 73.1738 bits (178), Expect = 7.045e-14
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSE---LAKD-YLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGF 1141
            G F WKI  F+++  E        IYS PFY+ RFGYKLC  +       A+D YL    ++F+ L  MRGE+D  L WPF+ ++ I +ID +NG 
Sbjct:  380 GTFLWKIDKFTERYAEAKSGNATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYL----SIFIAL--MRGEYDSILPWPFQETITITLIDQDNGM 469          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO49464 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG36])

HSP 1 Score: 69.707 bits (169), Expect = 9.449e-13
Identity = 83/359 (23.12%), Postives = 158/359 (44.01%), Query Frame = 2
Query:  227 IEHHIKTCDKQTVSCPF-NAIGCETNEVMHDEIN----DHLNVS---NYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQ-QLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTN-----IESYKEIGEAIPAKFQQQIGG-VKLEYHQWKHD-ETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSEN----GFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            +E H++TC+K  V CP   A G   +E++H + N      L  S   +  H K   E +     +  S+    +    +  E   +++   +   +  +   QQE++ E         RE   +  +N +  Q +L++IE     Q++E+ ++++   +++ +    + +     IE+    G A P+     +GG + LE  Q +++ +   +++     +++       S +  G + WKI  ++++  E        IYS PFY GR+GYK C  V      D +    ++ +   LMRGEFD  L WPF+  V   ++D +     G T++         P    + +PT+  NI
Sbjct:  154 MEDHLQTCEKHPVVCPHCGAEGICRDELLHHQTNICEQAELPCSFAKHGCHFKGTREALETHFRDQASVHVNLLLTATQNEEKARSEM-AAKLSQMEKERAKQQEQMYEQ--------REALAVANQNLRTYQGKLNVIERSVAEQRRELAELKERIQLQEVEAAIREQDRRLGMIENEASRG-AAPSSGPGSMGGTMALERRQDRNEHQLALHDIQLAEHDLKLQMLEATSYD--GTYIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYPN--GDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLLDQDRVHDIGDTFRPD-------PTSSSFKRPTSNMNI 491          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO48773 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI91])

HSP 1 Score: 60.4622 bits (145), Expect = 6.203e-10
Identity = 34/121 (28.10%), Postives = 61/121 (50.41%), Query Frame = 2
Query:  887 GIFKWKIKNFSQ-------KIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYK---TKTIKYSDCPDDDGWGKPTTERN 1219
            G F WK+ NF Q        +   I+S PFY+  +GYK+CL +        L    ++F+  H+M+G++D  L WPF   + + ++D  +    +   ++T+     P+   + +PT+ RN
Sbjct:  332 GTFIWKLDNFRQCREGSIAGLTAAIHSPPFYTSMYGYKMCLRMNLNGVDGGLGEHVSLFI--HMMQGDWDGILEWPFIGRITLSILDQSDQIDSRRPISETLVAK--PNLLAFQRPTSPRN 448          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO40665 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6K0])

HSP 1 Score: 58.5362 bits (140), Expect = 2.465e-9
Identity = 38/123 (30.89%), Postives = 67/123 (54.47%), Query Frame = 2
Query:  887 GIFKWKIKNFSQ--------KIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLH--LMRGEFDENLAWPFKNSVKIDVIDSENGFTYK-TKTIKYSDCPDDDGWGKPTTERNI 1222
            G F WKI N++Q        K  E++ S PFY+G++GYKL     +E   + L       ++L+  +M+G++D  L WPF+  V   +ID ++ FT +  KT + +   + D +G+P   +++
Sbjct:  229 GKFLWKISNYTQLFQQSATKKEKEKLCSPPFYTGQYGYKL----RAEAFLNGLGQGKGTHLSLYVVIMKGDYDSVLPWPFQQRVDFILIDQDDDFTSRQNKTWRLTCDRNSDYFGRPNKAKSL 347          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Match: EDO38873 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBN4])

HSP 1 Score: 54.6842 bits (130), Expect = 4.540e-8
Identity = 35/118 (29.66%), Postives = 54/118 (45.76%), Query Frame = 2
Query:  890 IFKWKIKNFSQKIGE-------RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            +  WKI N + K  E         YS  F++G  GYK+C  +   L  D +    +V +   +MRGEFD  L WPF+  V + ++D +N    +     +   P    + +P  E NI
Sbjct:  334 VLLWKITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIY--LNGDGMGRNHHVSLFFVIMRGEFDALLRWPFRQKVTLMLLDQDN---VEHVIDAFRPDPSSSSFQRPRAEMNI 446          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:101161132])

HSP 1 Score: 72.0182 bits (175), Expect = 5.070e-13
Identity = 48/154 (31.17%), Postives = 77/154 (50.00%), Query Frame = 2
Query:  887 GIFKWKIKNFS-----QKIGERI--YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL--HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPF-------DSPAVKNNRLEIECRVV 1300
            GIF W++K FS     Q+ G  +  +S  FY+GR GYKLCL +  +        +C+ F++L  H M+G FD  L WPF+ ++++ ++D      +  + ++    PD   + KP  +RN P    +V F           VK++ L I C V 
Sbjct:  396 GIFIWRLKAFSTHLRSQEAGIPVVEHSPGFYTGRPGYKLCLRLHLQTPT---APRCSNFISLFVHTMQGVFDSQLTWPFQGTIRLAILDQGPEGQHHMEVMETK--PDLQAFQKPINQRN-PKGFGYVTFMHRSLLSQRAYVKDDTLLIRCEVT 543          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: ENSORLT00000020861.2 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101167626])

HSP 1 Score: 62.3882 bits (150), Expect = 4.549e-10
Identity = 98/448 (21.88%), Postives = 185/448 (41.29%), Query Frame = 2
Query:   74 NYKFCPGATKNCQI---------INYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENS----------QIKQQLD-----IIELKSTNQQQEMIKMEKENL--IKQSKIFSEKTNIESY-------KEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKI-------GERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV-IFVPFDSPAVKNNRLEIE 1288
            N + CP  T NC+          I   ++I   +P+      +   C ++    ++ +D    HIK C K    C F+ +GC+T+ V  ++I+DH    +Y H+ LLL  I  ++  +ES++ + +            ++ +Q+ + ++  L + + ++ ++GR   A  + +       S           ++ QL      + EL    Q+ E+     EN+  I   ++      +E+Y       ++  E +  K +Q    V L        E K  ++S  + +              GIF WKI +F++K           ++S  FY+ ++GYK+CL +   L  D      ++ +   +MRG  D  L WPF   V + ++D  N      + I  +  PD     + +P ++ NI     +F P      KN+ +  E
Sbjct:  153 NERECPERTLNCKYCKEPFLLKNIKAHDEICPKYPM------MCEGCAKKKIPREKYVD----HIKFCSKFKAPCRFHVVGCDTS-VEKEKIHDHERQCSYEHLNLLLHFIMGIKVSLESLQPQRL------------EVASQKLHELHQSLRDLELRMSQLGRSGTAPLQGVCAATLATSFTPLHSAMGAALELQLQSEKTKVAELSRRCQELELKVSTFENIVCILNRELERSCATMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMEGKMKDMSAATYD--------------GIFIWKISDFTKKRQDAMAGRAPAMFSPAFYTSKYGYKMCLRIY--LNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN-----REHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDE 556          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601])

HSP 1 Score: 62.003 bits (149), Expect = 5.299e-10
Identity = 37/119 (31.09%), Postives = 60/119 (50.42%), Query Frame = 2
Query:  887 GIFKWKIKNFSQKIGERI-------YSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNI 1222
            G   WKI+++ ++  + +       YS+PFY+G FGYK+C  V   L  D +    ++ +   +MRGE+D  L WPFK  V + ++D   G + K     +   P    + +P  E NI
Sbjct:  298 GTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVY--LNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMD--QGPSRKHLGDAFKPDPSSSSFRRPVAEMNI 412          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: ENSORLT00000001369.2 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:101170323])

HSP 1 Score: 56.9954 bits (136), Expect = 2.346e-8
Identity = 37/130 (28.46%), Postives = 63/130 (48.46%), Query Frame = 2
Query:  887 GIFKWKIKNF-----SQKIGER--IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDS 1255
            G   WKIK+F     ++  G+   + S PF++GR GYK+   + + L  D      ++ + + LM G+FD  L WPFK +V + V+D      +++   +    P +  + +P  E    + V F  F S
Sbjct:  428 GRLIWKIKDFQKRREAEATGQHPCLSSVPFHTGRCGYKM--AMKAYLNGDGEGRGTHLSLYVVLMPGDFDALLPWPFKQTVSLSVLDQSGARNHQSFNFRPD--PTNTCFHQPAAESASNVAVGFPCFIS 553          
BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Match: unm_sa808 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101155367])

HSP 1 Score: 56.225 bits (134), Expect = 4.408e-8
Identity = 65/272 (23.90%), Postives = 114/272 (41.91%), Query Frame = 2
Query:  488 INLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQK----IGER---IYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPD--DDGWGKPTTERNIPINV-IFVPFDSPAVKNN 1273
            + LQL +++ K+ E+GRR      E++    EN       ++    +T        ME  N  +Q K+  +K          EA+  K +Q    V L+       E +  E++  + +              G+F W+I +F++K    +  R   ++S  FY+ ++GYK+CL +   L  D      ++ +   +MRG  D  L WPF   V + ++D  N      + I  +  PD     + +P +E NI     +F P      KN+
Sbjct:  349 LELQLHSEKTKVAELGRR--CTELEVKSGTFENVVCVLNREVERFTTT--------MEASN--RQHKLDQDKI---------EALSNKVRQLERTVGLKDLTVAEMEGRLREMAATTFD--------------GVFIWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIY--LNGDGTGRGTHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSN-----REHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNS 578          
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000015050.1 (SMESG000015050.1)

HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0
Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV 1300
            MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKLLLELINNLRNEMESMKNENIELRNEILELRGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRKLEKYLESEEESGIFKWKIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV
Sbjct:   33 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKLLLELINNLRNEMESMKNENIELRNEILELRGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRKLEKYLESEEESGIFKWKIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV 465          
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000014887.1 (SMESG000014887.1)

HSP 1 Score: 320.087 bits (819), Expect = 5.172e-105
Identity = 197/444 (44.37%), Postives = 278/444 (62.61%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQ--IINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXX-XXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDL-------KRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAKFQQQIGGVKLEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFSQKIGE-RIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRVV 1300
            MI ACN PC C FCS+CIEHYL+GN KFCPG TKNC+  +IN+ NDI  DW I+IRIS  +V CPR+NC+FKE L +IE+HI+TC KQ++ CPFN IGCE NEVM+DE+  HLN  NY + KLL++LINNLRNEMES+K E        I     N+ FN+QF NI L+ TNQQEK+ EM R+E  N  +IEDL       K EN  +K+++ I  ++S N+ ++ I+M                       I      KF + I  ++ ++ + K  + K   +   +SEIR + +     +  G+ +WKI+N +++  E  IYS+PFYS  FGY + L V       Y+  +  + V+ HLM G+FD+ L WPF+++V +DVIDSENG    ++T +YSDC +  GWGKP++ RN  I++  +P  SP +KNN+L ++CR++
Sbjct:   33 MIKACNTPCGCIFCSECIEHYLNGNDKFCPGTTKNCRKKLINFVNDIKFDWSIDIRISETVVNCPRQNCEFKERLGMIENHIRTCYKQSILCPFNVIGCEINEVMNDEMKAHLNEDNYCNSKLLIDLINNLRNEMESLKKEIIELRNENIELKIDNRKFNKQFDNIWLRSTNQQEKMCEMERKESENREQIEDLIEEIVATKSENRSMKEEIKIA-VESINETRQHIEM-----------------------IQTKSKQKFDELIQNIEQQHEENKKLQVK---MERCTSEIR-IIQTKLGNDNLGLLEWKIENVTEQECETEIYSRPFYSEPFGYTMNLIV-------YIESEGEIGVSFHLMPGKFDDKLEWPFRHAVTLDVIDSENGNVCHSQTKRYSDCTNTAGWGKPSSNRNSRIHMTTLPITSPLIKNNQLLVKCRLL 441          
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000000559.1 (SMESG000000559.1)

HSP 1 Score: 320.857 bits (821), Expect = 2.104e-104
Identity = 214/486 (44.03%), Postives = 280/486 (57.61%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQ--IINYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXXXXXXX--------XXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIE----------------------------DLKRENSQIKQQLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEI--GEAIP-----AKFQQQIGGVKL--EYHQWKHDETKENELSGVSSEIRXXXXX--XXXXXXXGIFKWKIKNFSQ-KIGERIYSKPFYSGRFGYKLCLGV-TSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCP---DDDGWGKPTTERNIPINVIFVPFDSPAVKNNRLEIECRV 1297
            MI AC+APC CRFCSDCI+HYLDGN KFCPG T+ CQ  +INYANDI  DWP NIRIS ++V CPR+NC+F +EL +IE+H +TCDK+++SCPFNAIGC  NE+ ++E+  HLN   Y H KLL+ELINNLRNEMESMK EN E+RN               N+ F QQ  NI  Q  NQQ+K+ EM  +E+ NT EIE                             LKRE SQ KQQ   IEL+ TNQQQ+M +ME +    + +I  E   + +       E I      +KF+QQI   K   E HQ + +   +NE+   ++EIR ++           GI  W+I   SQ +  + IYSKPFYSG  GYK+CL V   +     LVY        HLMRG+ D  L WPFK +VK+D I+  +G  Y ++++K  D P      GWG+P  +RN PI          A+KN++L ++CR+
Sbjct:   33 MIKACHAPCGCRFCSDCIQHYLDGNDKFCPGTTRYCQNRMINYANDIAIDWPFNIRISEIVVNCPRQNCEFNDELQMIENHTRTCDKRSISCPFNAIGCGMNEIRNEEMKSHLNEEIYCHSKLLIELINNLRNEMESMKRENTEMRNYNIELRNDIIELRNANEQFKQQIDNIERQFINQQQKMCEMEAKEQENTAEIEQLNEEMVVIKNANRALQDEMIELRNDNIQLKREISQSKQQNQNIELQLTNQQQKMCEMEAKEQENRGEINEEIAAVNNANRALQNEMIELRREISKFKQQIDAFKQISEQHQLQQNIKIQNEMEKCANEIRLIQTKFGNAEFINFGILDWQIDKLSQLERKKSIYSKPFYSGPGGYKMCLAVIIRDFGGAILVY-------FHLMRGDCDAGLEWPFKYAVKVDAINPADGNVYSSQSVKCPDSPAAAAAAGWGRPARDRNDPICYYITKL--SAIKNDKLLLKCRI 509          
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000049688.1 (SMESG000049688.1)

HSP 1 Score: 310.457 bits (794), Expect = 1.815e-100
Identity = 206/486 (42.39%), Postives = 284/486 (58.44%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQI--INYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKX-XXXXXXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIE---------------------DLKRENSQIKQQLDIIELKSTNQQQEMIKM---EKEN-------------LIKQSKIFSEK--TNIESYKEIG---EAIPAKFQQQIGGVK--LEYHQWKHDETKENELSGVSSEIRXXXXX--XXXXXXXGIFKWKIKNFS-QKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVK----NNRLEIECRV 1297
            MI ACNAPC CRFCSDCI+ YL+ N KFCPG  K CQ+  IN+  ++  D   N+RIS +IVKCPR+NC+ K EL ++E H++TCDK+ +SCPFN+IGCE NE+ ++E+N HLN SNY H KL+++L NN RNEMES+KN             + N+    Q  NI  Q TNQ +K+ EM  ++  N  EI+                     +L+REN + KQQ+D I+  STNQQQ+M +M   E+EN             L  +++  S +  TN E+  +I    E I    QQQ   +K   E  Q + ++  + E+   ++EIR+++     E   +SGIF+W+I   S Q+    IYSKPFYS  FGYK+CL V      DY      ++V  HL+RG+FD NL WPFK SVKID IDS NG    + ++KYSDC D  GW KP ++RN PI +     DS ++K    NN+L + C++
Sbjct:   26 MIKACNAPCGCRFCSDCIDQYLNQNDKFCPGEAKYCQVQKINFTRNVSEDHTANLRISEVIVKCPRQNCETKTELSMMEEHMRTCDKRPISCPFNSIGCEMNEIANEEMNAHLNESNYWHSKLIIDLFNNFRNEMESLKNGNMELRNEMTELKKKNRQSKHQIDNIEFQSTNQYQKMSEMEAKQLENAEEIKKINKEIVAVKKENESLREEMTELRRENREFKQQIDNIQSLSTNQQQKMGEMEAREQENAGEIELLNEEMVVLKNENRSMSSQMETNAEAINQIRMQIERIEINSQQQSDALKQNCEQLQLQANKNFQLEMEKCANEIRQIQSIFGDEDFMKSGIFEWEINKISEQRRNALIYSKPFYSVPFGYKMCLAV---FIWDY------IYVYFHLLRGDFDNNLEWPFKYSVKIDAIDSANGNIIHSSSVKYSDCSDVAGWRKPASDRNDPIRIYNYDCDSISIKSAAINNKLLLRCKI 502          
BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Match: SMESG000049567.1 (SMESG000049567.1)

HSP 1 Score: 309.686 bits (792), Expect = 2.339e-100
Identity = 206/484 (42.56%), Postives = 284/484 (58.68%), Query Frame = 2
Query:    2 MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQI--INYANDILTDWPINIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETNEVMHDEINDHLNVSNYSHIKXXXXXXXXXXXXXXSMKXXXXX-XXXXXXXXXGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIE---------------------DLKRENSQIKQQLDIIELKSTNQQQEMIKM---EKEN-----LIKQSKIFSE----------KTNIESYKEIG---EAIPAKFQQQIGGVK--LEYHQWKHDETKENELSGVSSEIRXXXXXXXXXXXXGIFKWKIKNFS-QKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNLHLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGKPTTERNIPINVIFVPFDSPAVK----NNRLEIECRV 1297
            MI AC+ PC CRFCSDCIE YL+   KFCPG  K CQ+  IN+  ++  D P NIRIS +IVKCP +NC+ K EL ++E HI+TCDK+ +SCPF +IGCE NE+ ++EIN HLN SNY H KL+++LINN RNEMES+KNEN+E         + N+   QQ  NI  Q TNQ +K+ EM  ++  N  EI+                     +L+REN + KQQ+D I+  STNQQQ+M +M   E+EN     L+ +  +  +          +TN E+  +I    E I    QQQ   +K   E  Q + ++  + E+   ++EIR+++           F+W+I   S Q+  E IYSKPFYSG FGYK+CL V       ++    ++ V  +LMRG+FD NL WPFK  V +DVIDS NG    +K++KYSDCPD  GW KP  +RN PI +     DS ++K    NN+L + C++
Sbjct:   26 MIKACHTPCGCRFCSDCIEQYLNETDKFCPGEAKYCQVQKINFTRNVSEDHPTNIRISEVIVKCPTQNCETKTELSMMEEHIRTCDKRPISCPFISIGCEINEIANEEINAHLNESNYWHSKLIIDLINNFRNEMESLKNENMELRNEMTELKKKNRQSKQQIDNIEFQSTNQYQKMSEMEAKQLENAEEIKKINKEIVAVKKENESLREEMTELRRENREFKQQIDNIQSLSTNQQQKMGEMEAREQENAGEIELLNEEMVVLKNEYRSMSSQMETNAEAINQIRMQIERIEINSQQQSDALKQNFEQQQLQANKNFQLEMEKCANEIRQIQST--------FFEWEIDKISEQRRNELIYSKPFYSGPFGYKMCLAV-------FIWGDGDIGVYFYLMRGDFDNNLEWPFKYEVAVDVIDSANGNIIHSKSVKYSDCPDAAGWRKPARDRNDPIRIYNYDCDSISIKSAAINNKLLLNCKI 494          
The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor 6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TRAF35.949e-1232.28TNF receptor associated factor 3 [Source:HGNC Symb... [more]
TRAF35.949e-1232.28TNF receptor associated factor 3 [Source:HGNC Symb... [more]
TRAF36.400e-1232.28TNF receptor associated factor 3 [Source:HGNC Symb... [more]
TRAF36.933e-1232.28TNF receptor associated factor 3 [Source:HGNC Symb... [more]
TRAF36.933e-1232.28TNF receptor associated factor 3 [Source:HGNC Symb... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
trf-13.763e-837.50TNF Receptor Associated Factor (TRAF) homolog; TRF... [more]
trf-26.612e-734.41TNF Receptor Associated Factor (TRAF) homolog [So... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
traf35.555e-1621.31TNF receptor-associated factor 3 [Source:ZFIN;Acc:... [more]
traf61.619e-1534.62TNF receptor-associated factor 6 [Source:NCBI gene... [more]
traf61.619e-1534.62TNF receptor-associated factor 6 [Source:NCBI gene... [more]
traf61.619e-1534.62TNF receptor-associated factor 6 [Source:NCBI gene... [more]
traf58.439e-1026.81Tnf receptor-associated factor 5 [Source:ZFIN;Acc:... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
egf2.971e-1330.52epidermal growth factor [Source:Xenbase;Acc:XB-GEN... [more]
ssh25.549e-1322.76slingshot protein phosphatase 2 [Source:Xenbase;Ac... [more]
ssh28.932e-1323.82slingshot protein phosphatase 2 [Source:Xenbase;Ac... [more]
hspb65.272e-833.33heat shock protein family B (small) member 6 [Sour... [more]
sytl25.928e-730.00synaptotagmin like 2 [Source:Xenbase;Acc:XB-GENE-9... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Traf64.382e-1328.10TNF receptor-associated factor 6 [Source:MGI Symbo... [more]
Traf33.701e-1232.28TNF receptor-associated factor 3 [Source:MGI Symbo... [more]
Traf33.701e-1232.28TNF receptor-associated factor 3 [Source:MGI Symbo... [more]
Traf34.165e-1232.28TNF receptor-associated factor 3 [Source:MGI Symbo... [more]
Traf17.794e-1028.76TNF receptor-associated factor 1 [Source:MGI Symbo... [more]
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BLAST of TNF receptor-associated factor 6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q6IWL4|TRAF6_DANRE1.222e-1434.62TNF receptor-associated factor 6 OS=Danio rerio OX... [more]
sp|Q6DJN2|TRF6B_XENLA2.539e-1433.33TNF receptor-associated factor 6-B OS=Xenopus laev... [more]
sp|Q28DL4|TRAF6_XENTR1.719e-1230.52TNF receptor-associated factor 6 OS=Xenopus tropic... [more]
sp|P70196|TRAF6_MOUSE3.065e-1228.10TNF receptor-associated factor 6 OS=Mus musculus O... [more]
sp|B5DF45|TRAF6_RAT5.449e-1228.10TNF receptor-associated factor 6 OS=Rattus norvegi... [more]
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BLAST of TNF receptor-associated factor 6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
I1ZID82.720e-1835.25TNF receptor associated factor-2 (Fragment) OS=Sch... [more]
F6S6361.326e-1621.76TNF receptor-associated factor OS=Ornithorhynchus ... [more]
T1E1011.493e-1636.28TRAF-6 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1[more]
A0A0E3TX441.431e-1331.48TNF receptor-associated factor OS=Megalobrama ambl... [more]
A0A2L0A4C21.496e-1331.48TNF receptor-associated factor OS=Mylopharyngodon ... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
traf61.112e-1430.77TNF receptor associated factor 6 [Source:NCBI gene... [more]
traf61.129e-1430.77TNF receptor associated factor 6 [Source:NCBI gene... [more]
traf61.129e-1430.77TNF receptor associated factor 6 [Source:NCBI gene... [more]
ENSAMXT00000035169.11.171e-1132.77pep primary_assembly:Astyanax_mexicanus-2.0:9:3354... [more]
traf52.548e-1121.75TNF receptor-associated factor 5 [Source:NCBI gene... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSPMAT00000000074.11.895e-1127.94pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-... [more]
ENSPMAT00000002130.14.130e-1026.32pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 g... [more]
traf61.044e-923.91TNF receptor-associated factor 6 [Source:NCBI gene... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO352377.045e-1441.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO494649.449e-1323.12Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO487736.203e-1028.10Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO406652.465e-930.89Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO388734.540e-829.66Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of TNF receptor-associated factor 6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
traf65.070e-1331.17TNF receptor associated factor 6 [Source:NCBI gene... [more]
ENSORLT00000020861.24.549e-1021.88TNF receptor-associated factor 2 [Source:NCBI gene... [more]
traf35.299e-1031.09TNF receptor associated factor 3 [Source:NCBI gene... [more]
ENSORLT00000001369.22.346e-828.46TNF receptor-associated factor 5 [Source:NCBI gene... [more]
unm_sa8084.408e-823.90TNF receptor-associated factor 2 [Source:NCBI gene... [more]
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BLAST of TNF receptor-associated factor 6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000015050.10.000e+0100.00SMESG000015050.1[more]
SMESG000014887.15.172e-10544.37SMESG000014887.1[more]
SMESG000000559.12.104e-10444.03SMESG000000559.1[more]
SMESG000049688.11.815e-10042.39SMESG000049688.1[more]
SMESG000049567.12.339e-10042.56SMESG000049567.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30033001 ID=SMED30033001|Name=TNF receptor-associated factor 6|organism=Schmidtea mediterranea sexual|type=transcript|length=1397bp
AATGATAAATGCTTGCAATGCTCCTTGTGAATGTCGTTTTTGTTCTGATT
GCATTGAGCATTACTTAGATGGAAATTATAAATTCTGTCCCGGAGCAACC
AAAAACTGTCAAATAATAAATTATGCAAATGATATCTTAACTGACTGGCC
AATCAACATTCGAATATCAAGACTTATTGTCAAATGTCCAAGGGAAAATT
GTCAATTTAAAGAGGAATTAGACTTGATAGAACATCACATAAAAACGTGT
GACAAGCAGACAGTCAGCTGTCCATTCAATGCAATTGGATGTGAAACGAA
TGAAGTGATGCATGACGAGATAAATGACCATCTCAATGTGAGCAATTATA
GTCATATCAAATTATTGCTTGAGCTGATCAATAATTTACGCAATGAAATG
GAATCAATGAAGAATGAAAATATCGAATTGAGAAATGAAATTCTCGAGCT
GAGAGGAAACAAGCTATTCAATCAACAATTTTATAATATAAATTTGCAAT
TAACAAATCAACAAGAGAAAATACTGGAAATGGGAAGGAGAGAAAAAGCA
AACACGAGAGAAATAGAAGATTTGAAAAGAGAAAATAGTCAAATCAAACA
ACAATTAGACATTATCGAGTTGAAATCAACAAACCAACAACAGGAAATGA
TAAAAATGGAAAAGGAAAACCTTATAAAACAATCGAAAATATTCTCCGAA
AAAACAAATATCGAATCTTACAAAGAAATCGGTGAGGCGATTCCAGCAAA
ATTCCAGCAGCAAATCGGTGGAGTGAAATTAGAATATCACCAATGGAAAC
ACGATGAGACTAAAGAAAACGAATTATCCGGCGTCAGCAGTGAAATTAGG
AAGTTGGAGAAATATTTGGAAAGTGAAGAAGAAAGCGGAATATTCAAATG
GAAAATTAAGAATTTTTCACAAAAGATTGGCGAAAGGATTTACAGTAAGC
CATTTTATTCTGGGCGATTTGGATACAAATTGTGTTTGGGGGTGACATCT
GAGTTGGCCAAGGATTATTTGGTCTATCAGTGTAATGTCTTTGTCAATTT
ACATTTGATGCGAGGAGAATTCGATGAGAATTTGGCTTGGCCATTCAAAA
ATTCCGTTAAAATTGATGTGATCGATAGTGAAAACGGTTTCACCTATAAG
ACTAAAACGATAAAATATTCGGATTGTCCCGATGATGACGGATGGGGAAA
ACCAACGACGGAGAGAAATATTCCGATCAATGTTATTTTTGTGCCATTCG
ATTCTCCAGCTGTCAAAAATAACCGATTGGAAATCGAATGCAGAGTTGTG
AAAAAATTATAAAAAAAAATGCAAAAAAAATATTTATAAATTGTTTTATT
TAAAATATGCAATAATGTGCGTTGTATATAATTAATAAATGCGCTTG
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protein sequence of SMED30033001-orf-1

>SMED30033001-orf-1 ID=SMED30033001-orf-1|Name=SMED30033001-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=437bp
MINACNAPCECRFCSDCIEHYLDGNYKFCPGATKNCQIINYANDILTDWP
INIRISRLIVKCPRENCQFKEELDLIEHHIKTCDKQTVSCPFNAIGCETN
EVMHDEINDHLNVSNYSHIKLLLELINNLRNEMESMKNENIELRNEILEL
RGNKLFNQQFYNINLQLTNQQEKILEMGRREKANTREIEDLKRENSQIKQ
QLDIIELKSTNQQQEMIKMEKENLIKQSKIFSEKTNIESYKEIGEAIPAK
FQQQIGGVKLEYHQWKHDETKENELSGVSSEIRKLEKYLESEEESGIFKW
KIKNFSQKIGERIYSKPFYSGRFGYKLCLGVTSELAKDYLVYQCNVFVNL
HLMRGEFDENLAWPFKNSVKIDVIDSENGFTYKTKTIKYSDCPDDDGWGK
PTTERNIPINVIFVPFDSPAVKNNRLEIECRVVKKL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0005164tumor necrosis factor receptor binding
GO:0005515protein binding
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
GO:0046872metal ion binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR043211TNF_rcpt-assoc_TRAF
IPR008974TRAF-like
IPR002083MATH/TRAF_dom
Vocabulary: biological process
TermDefinition
GO:0006955immune response
GO:0007165signal transduction
GO:0016567protein ubiquitination
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..153
NoneNo IPR availableCOILSCoilCoilcoord: 181..227
NoneNo IPR availablePANTHERPTHR10131:SF129TNF RECEPTOR-ASSOCIATED FACTOR 6coord: 77..411
NoneNo IPR availablePANTHERPTHR10131:SF129TNF RECEPTOR-ASSOCIATED FACTOR 6coord: 4..91
NoneNo IPR availableCDDcd16449RING-HCcoord: 8..30
e-value: 0.0081947
score: 32.0541
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 1..94
e-value: 4.2E-8
score: 35.2
IPR008974TRAF-likeGENE3DG3DSA:2.60.210.10coord: 261..435
e-value: 4.6E-28
score: 99.9
IPR008974TRAF-likeSUPERFAMILYSSF49599TRAF domain-likecoord: 295..432
IPR008974TRAF-likeSUPERFAMILYSSF49599TRAF domain-likecoord: 58..114
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 4..91
coord: 77..411
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 295..432
score: 11.263