DDE_Tnp_IS1595 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032980 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Zebrafish
Match: si:dkey-6f10.4 (si:dkey-6f10.4 [Source:ZFIN;Acc:ZDB-GENE-041210-340]) HSP 1 Score: 68.9366 bits (167), Expect = 1.374e-12 Identity = 54/193 (27.98%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 270 DARIEVIFQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSL----LRNPVIIGGPN--TIVEIDESLFT-RRKNHMGK-----KLPQQWIFGVISRDTGKSL--MLVVTDRN----APILP-----GTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAK 779 ++RI ++ ++ +S L I ++ + + + + N +R+VC+ +L R + +GG + V IDES F +RK + G+ + + W+FG++ + L + +V DR+ PI+ G+T SD AY + + Y H TVNHS +F+DP +TQ IER+W + K Sbjct: 99 NSRIPLVKWMEYIYRFSQGLHLRQIDLMDDGVAKTSTTLSRMNKLLRKVCIKALSNLKRRTGLRVGGKSRQKFVAIDESKFAHKRKFNRGRFCTTWQRRKGWVFGMMEVKGDRRLPVLKMVKDRSRTTLVPIITRHIRRGSTVYSDNWRAY--LNALQPLRYRHLTVNHSENFVDPQTGCHTQHIERAWLAIK 289
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Zebrafish
Match: si:dkey-6f10.4 (si:dkey-6f10.4 [Source:ZFIN;Acc:ZDB-GENE-041210-340]) HSP 1 Score: 68.9366 bits (167), Expect = 1.374e-12 Identity = 54/193 (27.98%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 270 DARIEVIFQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSL----LRNPVIIGGPN--TIVEIDESLFT-RRKNHMGK-----KLPQQWIFGVISRDTGKSL--MLVVTDRN----APILP-----GTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAK 779 ++RI ++ ++ +S L I ++ + + + + N +R+VC+ +L R + +GG + V IDES F +RK + G+ + + W+FG++ + L + +V DR+ PI+ G+T SD AY + + Y H TVNHS +F+DP +TQ IER+W + K Sbjct: 99 NSRIPLVKWMEYIYRFSQGLHLRQIDLMDDGVAKTSTTLSRMNKLLRKVCIKALSNLKRRTGLRVGGKSRQKFVAIDESKFAHKRKFNRGRFCTTWQRRKGWVFGMMEVKGDRRLPVLKMVKDRSRTTLVPIITRHIRRGSTVYSDNWRAY--LNALQPLRYRHLTVNHSENFVDPQTGCHTQHIERAWLAIK 289
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Zebrafish
Match: si:dkey-17m8.2 (si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]) HSP 1 Score: 68.1662 bits (165), Expect = 1.854e-12 Identity = 54/193 (27.98%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 270 DARIEVIFQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSL----LRNPVIIGGPN--TIVEIDESLFT-RRKNHMGK-----KLPQQWIFGV--ISRDTGKSLMLVVTDRN----APILP-----GTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAK 779 ++RI ++ ++ +S L I ++ + + + + N +R+VC+ +L R + +GG + V IDES F +RK + G+ + + W+FG+ + D ++ +V DR+ PI+ G+T SD AY + + Y H TVNHS +F+DP +TQ IER+W + K Sbjct: 80 NSRIPLVKWMEYIYRFSQGLHLRQIDLMDDGVAKTSTTLSRINKLLRKVCIKALSNLKRRTGLRVGGKSRQKFVAIDESKFAHKRKFNRGRFCTTWQRRKGWVFGMMEVKGDHRLPVLKMVKDRSRTTLVPIITRHIRRGSTVYSDNWRAY--LNALQPLRYRHLTVNHSENFVDPQTGCHTQHIERAWLAIK 270
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. TrEMBL
Match: A0A146LFY4 (Putative transposase-like protein HI_1328.1 OS=Lygus hesperus OX=30085 GN=HI_1328.1_3 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.032e-59 Identity = 101/203 (49.75%), Postives = 131/203 (64.53%), Query Frame = 3 Query: 297 EVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNAP---------ILPGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRLKMRHAD 878 +++LFIY+W+ E+ S+KFCE EL ++ + V+ W YM EVC NS+LR IGGPN VEIDESLF+RRKNH G++LPQQ IFG I R+T + ++ V DR + I+PGTT MSDQ SAY A+A + H TVNHSL+F+DP A+TQ IE W K NK T +LDSYLC ++WR +K R D Sbjct: 77 DIVLFIYAWADEMVSVKFCEKELSMNHNTVVGWCNYMHEVCANSILRIQSRIGGPNMTVEIDESLFSRRKNHTGRQLPQQRIFGGICRETKECFLVAVPDRTSATLMSVIKDRIMPGTTIMSDQWSAYG--ALARDPNFRHFTVNHSLNFVDPTTGAHTQSIESLWGKCKTRNKLQWGTRRSLLDSYLCEFMWRQTVKARQVD 277
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. TrEMBL
Match: A0A0A9YMJ9 (Putative transposase-like protein HI_1328.1 OS=Lygus hesperus OX=30085 GN=CM83_19026 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.767e-58 Identity = 100/203 (49.26%), Postives = 131/203 (64.53%), Query Frame = 3 Query: 297 EVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNAP---------ILPGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRLKMRHAD 878 +++LFIY+W+ E+ S+KFCE EL ++ + V++W YM EVC NS+LR IGGPN VEIDESLF+RRKNH G++LPQQ IFG I R+T + ++ V DR + I+PGTT MSDQ SAY A+A + H TVNHSL+F+D A+TQ IE W K NK T +LDSYLC ++WR +K R D Sbjct: 77 DIVLFIYAWANEMVSVKFCEKELSMNHNTVVDWCNYMHEVCANSILRIQSRIGGPNMTVEIDESLFSRRKNHTGRQLPQQRIFGGICRETKECFLVAVPDRTSATLMSVIKDRIMPGTTIMSDQWSAYG--ALARDPNFRHFTVNHSLNFVDLTTGAHTQSIESLWGKCKTRNKLQWGTRRSLLDSYLCEFMWRQTVKARQVD 277
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. TrEMBL
Match: A0A0L8G6F6 (DDE_Tnp_IS1595 domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22039385mg PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.365e-56 Identity = 96/206 (46.60%), Postives = 136/206 (66.02%), Query Frame = 3 Query: 291 FQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNA----PIL-----PGTTTMSDQ*SAYNGIAVAISMG-YSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRLKMRHAD 878 F + FIY W+ +L S+ FCE+EL++ S +++WN Y+REVC +L NP +IGGPN VEIDESLFT+RK+ G++ P+Q +FG I ++T + M V DR+A PI+ PGTT +S + S Y I I+ G + H TV +SL F+DP N+A+TQ ER WKSAKE NKR TH +LDSY+C ++WR ++++ D Sbjct: 74 FHKAAFFIYCWAHDLASVNFCEHELEMKASCIVDWNNYLREVCAAHILSNPKVIGGPNMTVEIDESLFTKRKSCAGRQPPRQLVFGGICKETKECFMFTVPDRSATTLLPIIENNIRPGTTIISAEWSTYENI---INSGRFQHLTVKNSLHFVDPTNTAHTQNSERLWKSAKEKNKRENGTHRALLDSYMCEFMWRQEIELKKLD 276
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. TrEMBL
Match: A0A1B6H5F2 (DDE_Tnp_IS1595 domain-containing protein (Fragment) OS=Homalodisca liturata OX=320908 GN=g.11270 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.823e-55 Identity = 95/199 (47.74%), Postives = 127/199 (63.82%), Query Frame = 3 Query: 291 FQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNA----PIL-----PGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRL 860 F V+LFIY WS +LTS+ FCE EL I+ + +++WN Y+REVC LL NP++IGGP VEIDES+F +RK ++G+ +QWIFG I +T + V DR+A PI+ PGT +SD+ +YNGI A S Y H TVNHS +FIDP A+ ++R W AK +R TH +LDSYLC ++WR RL Sbjct: 68 FDRVLLFIYCWSHKLTSVDFCERELKINHNTIVDWNNYLREVCAAKLLANPLVIGGPGLTVEIDESVFAKRKYNVGRVPKKQWIFGGICHETKDCFLFAVEDRSAASLMPIIVESIAPGTRIVSDKWRSYNGIRNANS-NYDHNTVNHSENFIDPGTGAHINTVKRMWGVAKSSFRRQYGTHSKLLDSYLCEFMWRKRL 265
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. TrEMBL
Match: A0A146M1Q1 (Putative transposase-like protein HI_1328.1 (Fragment) OS=Lygus hesperus OX=30085 GN=HI_1328.1_0 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.493e-52 Identity = 95/225 (42.22%), Postives = 141/225 (62.67%), Query Frame = 3 Query: 273 ARIEVIFQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLR-NPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNAPIL---------PGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRLKMRHADQCNNNVTLIIASY 917 R ++ F VI FIY W++ELTS+ FC +L ++ + V++WN Y+REVCV S+ R N IGG IVEIDESLF++RK+++G+ LPQQW+FG + R+TG+ ++ V +R A L PG+T MSD Y+ + + G++H VNH +F+DP ANTQ++ER W SAK NK+ T H LD+YL Y+WR+ + + D N + I+++ Sbjct: 56 GRSKLSFTTVIRFIYFWAEELTSVNFCHKQLGMAPNTVVDWNNYLREVCVFSVERKNSGKIGGAGKIVEIDESLFSKRKSNVGRVLPQQWVFGGLCRETGQRFLVKVPNRGAVTLLSEIKKNIEPGSTIMSDSWRGYSTQELE-NAGFAHFKVNHKYNFVDPETGANTQQVERMWGSAKWRNKKQRGTARHHLDTYLVEYMWRSGV-VASGDDAFNTILADISAF 278
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Nematostella
Match: EDO49358 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG49]) HSP 1 Score: 79.337 bits (194), Expect = 8.770e-17 Identity = 63/223 (28.25%), Postives = 101/223 (45.29%), Query Frame = 3 Query: 297 EVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVI-IGGPNTIVEIDESLFT-RRKNHMGKKLPQQWIFGVISR--DTGKSLMLVVTDRN----APIL-----PGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRLKMRHADQCN-NNVTLIIASYIR 923 ++++ IY WS E+ ++ L ++ V +R +C ++ PV GGPN + + DE++ + +RK G+ Q+W+FG ++ + VV R API+ PG+ SD AY I SH V H F+DP NTQ+IE +W K K L S+L +WR ++C +N+ L+I+ Y R Sbjct: 81 KLVVLIYFWSVEVLQVQ-ASTMLGMTPQMVGKVCRALRLLCSRDVVDRPVYPFGGPNHVCKCDETVISFKRKYGRGRISRQRWVFGQVTTAFQPCRGYYTVVNKRTREVLAPIIQEVLQPGSVFHSDDWGAYRNITAHAPNVSSHRVVVHKDYFVDPVTGVNTQEIESTWARVKRMVKSKKRIPTADLQSHLDEVMWRQ----WRGEKCPFDNMVLLISRYYR 298
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Nematostella
Match: EDO42124 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2D6]) HSP 1 Score: 65.855 bits (159), Expect = 3.212e-12 Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 273 ARIEVIFQEVILFIYSWSKEL---TSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVI-IGGPNTIVEIDESLFTRRKNHMGKKLP--QQWIFGVISR 560 RIE+ ++++ I+SW+K+L TS + C D+S+ AV + + +R++C L R PVI GGP + +IDES F + H + P + W+FGV+ R Sbjct: 130 PRIEL--SKIVIIIHSWAKKLKQKTSAEMC----DVSERAVGHISARIRDICAEDLRRRPVIPFGGPGVVCQIDESRFNHKPKHNRGRPPMRENWVFGVVHR 225
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Nematostella
Match: EDO44629 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVE9]) HSP 1 Score: 56.9954 bits (136), Expect = 3.966e-10 Identity = 41/128 (32.03%), Postives = 62/128 (48.44%), Query Frame = 3 Query: 441 PVI-IGGPNTIVEIDESLFTRRKNHMGKKLP--QQWIFGVISR--DTGKSLMLVVTDRNA----PI-----LPGTTTMSDQ*SAYNGIAVAISMGYSHE-TVNHSLDFIDPNNSANTQKIERSWKSAK 779 PVI GGP + +IDES F + + + P + W+FGV+S + +V R+A PI LPG+T SD +AY + + +++ V H +F+DP +TQ IE W K Sbjct: 1 PVIPFGGPGIVCQIDESRFNHKPKYNRGRPPMRENWVFGVLSTAYSPSRGYFQLVPRRDAETLLPIIQRALLPGSTVHSDDWAAYRRLQARLPNVVANQGVVVHRYNFVDPITGVHTQNIESLWSRLK 128
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Nematostella
Match: EDO33828 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR40]) HSP 1 Score: 56.225 bits (134), Expect = 6.135e-10 Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 3 Query: 441 PVI-IGGPNTIVEIDESLFTRRKNHMGKKLP--QQWIFGVISR--DTGKSLMLVVTDRNA---------PILPGTTTMSDQ*SAYNGIAVAI-SMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAK 779 PVI GGP + +IDES F + + + P + W+FGV+S + +V R+A +LPG+T SD +AY + + ++ + V H +F+DP +TQ IE W K Sbjct: 1 PVIPFGGPGIVCQIDESRFNHKPKYNRGRPPMRENWVFGVLSTAYSPSRGYFQLVPRRDAETLLTIIQRALLPGSTVHSDDWAAYRRLQARLPNIVANQGVVVHRYNFVDPITGVHTQNIESLWSRLK 128
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Nematostella
Match: EDO42125 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2D7]) HSP 1 Score: 54.299 bits (129), Expect = 3.755e-9 Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 366 DISKSAVINWNMYMREVCVNSLLRNPVI-IGGPNTIVEIDESLFTRRKNHMGKKLP--QQWIFGVISR 560 D+S+ AV + + +R++C L R PVI GGP + +IDES F + H + P + W+FGV+ R Sbjct: 3 DVSERAVGHISARIRDICAEDLRRRPVIPFGGPGVVCQIDESRFNHKPKHNRGRPPMRENWVFGVVHR 70
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Planmine SMEST
Match: SMESG000036215.1 (SMESG000036215.1) HSP 1 Score: 103.605 bits (257), Expect = 8.637e-27 Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 3 Query: 303 ILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDE 485 I+FIY WSKELTSI+FCE EL+I KS+VI+WN YMREVC N+L+ NP++IGGPNT VEIDE Sbjct: 28 IIFIYCWSKELTSIRFCETELEIFKSSVIDWNNYMREVCANTLINNPIVIGGPNTTVEIDE 88
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Planmine SMEST
Match: SMESG000054196.1 (SMESG000054196.1) HSP 1 Score: 86.2705 bits (212), Expect = 1.399e-19 Identity = 66/197 (33.50%), Postives = 90/197 (45.69%), Query Frame = 3 Query: 372 SKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDESLF-------------------------TRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNAPIL---------PGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEG-NKRHIETHCHMLDSYLCVYIWRNR 857 S V++W ++R+V + I G N V+IDESLF RR N+ G ++ WIFG++ DT + M V R+A L PGTT +SD AY I IS+G+ HE V H +FIDP ANTQ+IE W AK K T +L S+L +++R R Sbjct: 8 SSKTVVDWTNFIRDVMRKERIMRLKIEGVGNR-VQIDESLFRGKRKYNRGRLLLGDFDVENEADSGLRRSNY-GTRINGPWIFGMVEEDTNEMFMFYVEKRDAATLLPLIVEHVEPGTTIVSDGWRAYLNI---ISLGFFHEVVKHEENFIDPTTGANTQRIECGWGQAKLLIMKLKRGTTLGLLQSHLDEFVFRKR 199
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Planmine SMEST
Match: SMESG000074868.1 (SMESG000074868.1) HSP 1 Score: 83.5741 bits (205), Expect = 2.546e-17 Identity = 59/205 (28.78%), Postives = 106/205 (51.71%), Query Frame = 3 Query: 273 ARIEVIFQEVILFIYSWSKELTSIKFCENELDISKSAVINWNMYMREVCVNSLLRNPVIIGGPNTIVEIDESLFTRR-KNHMGKK-LPQQWIFGVI-SRDT-GKSLMLVVTDRNA----PIL-----PGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIW 848 A + + +++ +++S+E+ + F +NELD S++ +I + +R +C + +++G +IVE+DESLF + K H G+ L + W+ G++ +R T + M +V R+A PIL P + +D AY ++ + H+TVNH L F+D + +TQ IE W K K +L+ YL ++W Sbjct: 81 ASFNISLKNILVIFWTFSQEIQIVDF-KNELDCSENTIIKFYGALRRLCRDYYAGKRIVLGDTQSIVEVDESLFRHKPKYHRGRATLNEAWVVGIVDTRYTPARGYMQLVRSRSAESLLPILLKKIHPESIVRTDMWRAY----FNLNRLFEHQTVNHRLCFVDRSTGVHTQTIESYWSRQKYRLKCLRGIKLSVLNEYLATFMW 280
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Planmine SMEST
Match: SMESG000079181.1 (SMESG000079181.1) HSP 1 Score: 72.7886 bits (177), Expect = 5.557e-15 Identity = 47/161 (29.19%), Postives = 72/161 (44.72%), Query Frame = 3 Query: 405 MREVCVNSLLRNPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIFGVISRDTGKSLMLVVTDRNAPIL---------PGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAKEGNKRHIETHCHMLDSYLCVYIWRNRL 860 +REV +N ++IG +VEIDES RRK G + +QW+F + + ++ + RN L PG+ SD +AY + V +GY H VN +++DP + A T E + K N T S+L ++WR R Sbjct: 2 LREVMFEYFNQNTIMIGRLGILVEIDESQLVRRKYERGHLVREQWVFDGVEVENKIGFLVPIEKRNRETLQCMIRKFIRPGSIIHSDFWAAYGDLTV---LGYFHFKVNLEENYVDPISGATTNHQESRCQKVKMRNIMRYGTARTTFGSHLIEFLWRQRF 159
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Planmine SMEST
Match: SMESG000013793.1 (SMESG000013793.1) HSP 1 Score: 62.3882 bits (150), Expect = 3.103e-11 Identity = 41/138 (29.71%), Postives = 72/138 (52.17%), Query Frame = 3 Query: 396 NMYMREVCVNSLLRNPVIIGGPNTIVEIDESLFTRRKNHMGKKLPQQWIF-GVISRDTGKSLMLVVTDRNAPI---------LPGTTTMSDQ*SAYNGIAVAISMGYSHETVNHSLDFIDPNNSANTQKIERSWKSAK 779 N+ +++VC S+ R + IGGP +V++DES F +RK ++G ++ W+F GV K ++V R+A LPG+T ++D + I+ ++H NHS+ F++ N NT I+ ++ K Sbjct: 27 NILLKKVC-ESVSREDLRIGGPGVLVQLDESKFGKRKYNLGHRVEGTWVFAGVEKTPERKCFAVIVDKRDADTVNFLILKYALPGSTVVTDGWKGNDTFKNNIN--FTHHWANHSVTFVN-NEGFNTYTIDGTFNGMK 160 The following BLAST results are available for this feature:
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of DDE_Tnp_IS1595 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032980 ID=SMED30032980|Name=DDE_Tnp_IS1595 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1077bpback to top protein sequence of SMED30032980-orf-1 >SMED30032980-orf-1 ID=SMED30032980-orf-1|Name=SMED30032980-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=161bp MKQQLMYGTVVDEYSRSLAVQSKKLQRDDPCATRHIDARIEVIFQEVILFback to top Annotated Terms
The following terms have been associated with this transcript:
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