Signal recognition particle receptor subunit alpha

Overview
NameSignal recognition particle receptor subunit alpha
Smed IDSMED30032897
Length (bp)2777
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Signal recognition particle receptor subunit alpha (SMED30032897) t-SNE clustered cells

Violin plots show distribution of expression levels for Signal recognition particle receptor subunit alpha (SMED30032897) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Signal recognition particle receptor subunit alpha (SMED30032897) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Signal recognition particle receptor subunit alpha (SMED30032897) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30032897

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
parapharyngeal regionSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30032897h1SMcG0002591 dd_Smed_v4_1375_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032897h1SMcG0002591 Contig48672newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032897h1SMcG0002591 Contig48672uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
epidermisSMED30032897h1SMcG0002591 dd_Smed_v6_1375_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
secretory systemSMED30032897h1SMcG0002591 dd_Smed_v6_1375_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Human
Match: SRPRA (SRP receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:11307])

HSP 1 Score: 244.973 bits (624), Expect = 1.007e-69
Identity = 128/274 (46.72%), Postives = 179/274 (65.33%), Query Frame = 3 
Query:  804 DALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEG-QLADIXXXXXXXXXXXXXXXYQKEIKTESKPQKKSN---GMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
            + L+YS     NG  E  LS          E++N ++G   G QL D++  S  D         +   +  +KP        GMF MLK  VG     L+ E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R+ RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVEQLR H ++L+ +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:  229 EVLDYSTPTT-NGTPEAALS----------EDINLIRGTGSGGQLQDLDCSSSDD---------EGAAQNSTKPSATKGTLGGMFGMLKGLVGSKS--LSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF 480

HSP 2 Score: 199.134 bits (505), Expect = 1.386e-53
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  481 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 609

HSP 3 Score: 73.1738 bits (178), Expect = 1.299e-12
Identity = 50/161 (31.06%), Postives = 78/161 (48.45%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ                            V +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQ----------------------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSM 124
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Human
Match: SRPRA (SRP receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:11307])

HSP 1 Score: 244.588 bits (623), Expect = 2.395e-69
Identity = 109/193 (56.48%), Postives = 149/193 (77.20%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
             GMF MLK  VG     L+ E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R+ RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVEQLR H ++L+ +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:  318 GGMFGMLKGLVGSKS--LSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF 508

HSP 2 Score: 198.749 bits (504), Expect = 2.622e-53
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  509 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637

HSP 3 Score: 118.627 bits (296), Expect = 8.517e-27
Identity = 62/161 (38.51%), Postives = 99/161 (61.49%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ++   N + HE ++L+Y +DNQF+LV+VV +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Human
Match: SRP54 (signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301])

HSP 1 Score: 56.6102 bits (135), Expect = 1.664e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  116 KNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA----KAFKD------KVDVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 231
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Human
Match: SRP54 (signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301])

HSP 1 Score: 56.225 bits (134), Expect = 1.860e-7
Identity = 32/127 (25.20%), Postives = 61/127 (48.03%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q   F   +           +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  131 KNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 246
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Human
Match: SRP54 (signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301])

HSP 1 Score: 56.225 bits (134), Expect = 2.084e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA----KAFKD------KVDVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Celegans
Match: F38A1.8 (pep chromosome:WBcel235:IV:1232872:1239852:-1 gene:WBGene00009521.1 transcript:F38A1.8.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F38A1.8)

HSP 1 Score: 246.128 bits (627), Expect = 2.089e-70
Identity = 182/531 (34.27%), Postives = 278/531 (52.35%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNS-LIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKY-KNVLESQNFLWDFSDFISVVDSTFLTV----------KNNFMSKPKKEMISFQESYKAAKTLKSM--TNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAV 1592
            MI+LF+IF+KGG+ L W  Q G  N T+++N+ LIK  +++++ +         ++++ +DN+++++++V YQ+++ L+Y +K L  +   FR ++ +N+ E        S+     D TF  V            N + KPK    +FQES K+ KT+ S+  +    K+++       K   +  ES   +   +          DEE L  +     K  G   K G              E  S K KGK+ R W    +G  AD     K L+ +  KE   +  ++     +E + +  G L+G L  ++   D D  +  ++             K+S G FSM+K  VG     L+ E + P++E ++ +LI KNVASE A ++C  V  KL GK +    RV+ +++ ++ +S  +LL    R+D+LRDVIEAKR GRPYVI FCGVNGVGKSTNLAKI+FWL E   RV+IAA DTFR+GAVEQLR H + LN +H          V L+E+GYGKD A +
Sbjct:    1 MIELFSIFTKGGVCL-WNYQEGDYNFTEAINNELIKGTLMEERGNSGQKKVGNYTMKFQLDNEYNVIFLVIYQTIVNLNYAEKLLNLVVDSFRGEFSENLREETALTTPPSNIYGNFDETFHEVLSEAAKSARATENTVKKPK----TFQESAKSQKTIDSLIVSRPGQKNAEKSAKNAEKTPKKPVESAEESSATDYNSASPPGSPDEEVLRRRDQMFKKMSGNTKKKGPE------------EPTSPKPKGKQARVWA--LSGKPADV----KNLDRSDPKENDENAADEEKNRFVESMKEQIGTLKGDLKSLQESDDEDEDDNDQQVV-----------KQSGGWFSMIKGLVGEKK--LSAEDLNPLIEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNFSRVAQEVKTAVRESLVQLLTPKHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENKHRVLIAAGDTFRAGAVEQLRTHARYLNDLHKNS-------VLLHEQGYGKDPAGL 488

HSP 2 Score: 196.052 bits (497), Expect = 8.786e-53
Identity = 96/127 (75.59%), Postives = 111/127 (87.40%), Query Frame = 1 
Query: 2272 EKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDY-SGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            E+ FDVV++DT+GRMQDNEPLMR LAKLI VN+PDLVLFVGEALVG+EAVDQLVKFN+AL ++ S    PR I+GIVLTKFDTIDDKVGAA+SMTYI GQPI+FVG GQTY+DLR L+  AVV SL+
Sbjct:  498 EQDFDVVLVDTAGRMQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHASPGQKPRLIDGIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYSDLRNLNVGAVVHSLL 624
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Celegans
Match: F21D5.7 (Signal recognition particle 54 kDa protein [Source:UniProtKB/TrEMBL;Acc:G5EE80])

HSP 1 Score: 60.8474 bits (146), Expect = 3.090e-9
Identity = 33/126 (26.19%), Postives = 65/126 (51.59%), Query Frame = 1 
Query: 2272 EKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            ++ F+++++DTSGR +    L   + ++ N   PD V+FV +A +G     Q   F++ +           +  +++TK D+   K G A+S   +   P++F+GTG+   D     P++ V+ L+
Sbjct:  181 QEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTVD----------VASVIITKLDS-HAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Fly
Match: Gtp-bp (gene:FBgn0010391 transcript:FBtr0073480)

HSP 1 Score: 237.654 bits (605), Expect = 1.936e-67
Identity = 112/208 (53.85%), Postives = 148/208 (71.15%), Query Frame = 3 
Query:  993 QKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLG 1616
            + E + +SK  K+  G+ S  K  VG     L + Q  P LE ++ HLI+KNVASE+A +LC+ VA  L GK++G  + ++++++E+L +S  ++L+  RRID++RD +E+KR GRPY I FCGVNGVGKSTNLAKI FWLIE  F V+IAACDTFR+GAVEQLR H + LN +HP  +H G  MVQLYEKGYGKDAA +A  AI   
Sbjct:  282 EAEEQVQSKKGKRG-GLLSYFKGIVGAKTMSLADLQ--PALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFA 486

HSP 2 Score: 205.297 bits (521), Expect = 5.811e-56
Identity = 98/129 (75.97%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A +   DVV++DT+GRMQDNEPLMRSL+KLI VN PDLVLFVGEALVG+EAVDQLVKFN++L DYS +++P  I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTYADL+ ++  AVV SLMK
Sbjct:  486 AHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 614

HSP 3 Score: 84.3445 bits (207), Expect = 1.960e-16
Identity = 47/157 (29.94%), Postives = 87/157 (55.41%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHE-LVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWD--FSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNEN 503
            M+D   IF+KGG+VL W+      +    +NSLI+ ++L+++ ++  Y  E  +++Q+ +DN+ DLVY   +Q V++L+Y D FL  +   F++KY ++    ++ +D  +   +S  +            K  K M S+ ES K+ KT+ SM  ++
Sbjct:    1 MLDFVVIFTKGGVVL-WHSNASGNSFASCINSLIRGVILEERNTEAKYYEEDHLAVQFKLDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSAAEEASAK-----QVKAPKTMRSYNESQKSKKTVASMIQDD 151
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Fly
Match: Srp54k (gene:FBgn0010747 transcript:FBtr0077169)

HSP 1 Score: 58.151 bits (139), Expect = 2.569e-8
Identity = 38/127 (29.92%), Postives = 61/127 (48.03%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K + F+++++DTSGR +  E L   +  + N   PD ++FV +A +G     Q     KA +D         I  +++TK D    K G A+S       PI+F+GTG+   DL     +  V  L+
Sbjct:  180 KREGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQA----KAFKDKV------DIGSVIITKLDG-HAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Zebrafish
Match: srpra (SRP receptor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030219-11])

HSP 1 Score: 362.073 bits (928), Expect = 5.712e-113
Identity = 228/534 (42.70%), Postives = 316/534 (59.18%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGA--ENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQN---FLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLES-KLAKIAKTRGXXXXXXXXXXXPS-PTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEK-LTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQKKSN--GMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
            M+D F IFSKGG+VL W  Q     E+ T  VN+LI+S++LQ++   N + H  +SL+Y +DN+F+LV+VV +Q+ L L Y DKF+  + L FRD+YKN LE +    FL +  +F           + +  +K    M +F++S K+ KT+KSM  E     K ++    K K    E+    +  +        KA E   ES    +I + R K +   +   KP  P+ SP  +    K KGK NR W  +  G  +  L+YS     NGN       ++   T E   ++  +KG L G   D E+  D D   E EE       T+    K+S   GMF MLK  VG     LT+E M PVL+ +K HLI KNVA+E+A +LC+ VAKKL GK +G    V++ ++++L+DS  ++L   RR+D+LRDV+EA+ Q +P+VI+FCGVNGVGKSTNLAKIS+WLIE GF V+IAACDTFR+GAVEQLR H ++LN +HPPE+H G P VQL+EKGYGKDAA +A  AI+ 
Sbjct:    1 MLDFFAIFSKGGIVL-WCFQGAGVTESFTGPVNALIRSVILQERSGNNFFTHNTLSLKYKLDNEFELVFVVGFQANLMLKYVDKFIDDVQLHFRDRYKNELEQRGALKFLLNNYEFGDDFHRLLREAEESSKAKGPASMRTFEQSQKSKKTVKSMI-ETKDADKSKEQGGKKSKNAKKEAESGGDKAKAASQAPAKKAVENGSESLTQDEIERNRAKFISKQLGGGKPEKPSKSPKPQG---KPKGKVNRVW--DMGGKSSGELDYSG---TNGNNSNDAKSEDNDATAEPAIQVESMKGDLRG--VDYESSDDEDEEVEEEEKKVVVTNTKKTGAKRSGFGGMFGMLKGLVGSKN--LTQEDMEPVLDKMKDHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRDVLEARSQRKPFVITFCGVNGVGKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPEKHGGQPAVQLFEKGYGKDAAGIAMEAIAF 520

HSP 2 Score: 207.608 bits (527), Expect = 1.709e-56
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV+IDT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S SD PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY+DLR L+  AVV +LMK
Sbjct:  521 ARNQGFDVVLIDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSKSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYSDLRSLNARAVVSALMK 649
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Zebrafish
Match: srp54 (signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818])

HSP 1 Score: 56.225 bits (134), Expect = 1.576e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KSENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQA----KAFKDKV------DVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Zebrafish
Match: srp54 (signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818])

HSP 1 Score: 56.225 bits (134), Expect = 1.576e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KSENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQA----KAFKDKV------DVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Xenopus
Match: SRPRA (SRP receptor subunit alpha [Source:NCBI gene;Acc:100271764])

HSP 1 Score: 261.922 bits (668), Expect = 7.299e-76
Identity = 143/290 (49.31%), Postives = 190/290 (65.52%), Query Frame = 3 
Query:  741 SKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            ++K KGK+ R W   A+  +   L+YSK          + S +  + ++DL  L      ++G   D+E +S  +         ++E+ T    +    GMF MLK  VG     LT E M PVLE +K HLI KNVA+++A++LC  VAKKL GK +G  E V++ ++++L++S  ++L   RR+D+LRDV+EA+   RPYVI+FCGVNGVGKSTNLAKISFWLIE GF V+IAACDTFR+GAVEQLR H Q+LN  HPPE+H G  MVQLYEKGYGKDAA +A  AIS
Sbjct:  223 AQKEKGKQPRVWVPGASNNKE--LDYSKA-------APKGSSEVPIPIDDLATLQYSSESMQGNPPDLECDSSSEEE-------EEELPTIKAKKSSFGGMFGMLKGLVGAKS--LTMEDMEPVLEKMKDHLIAKNVAADIAVQLCESVAKKLEGKVMGTFETVTSSVKQALQESLVQILQPKRRVDILRDVMEAQHLRRPYVITFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTQRLNSRHPPEKHKGRTMVQLYEKGYGKDAAGIAMEAIS 494

HSP 2 Score: 206.068 bits (523), Expect = 6.523e-56
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFNKAL DYS +D PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  496 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNVPDLVLFVGEALVGNEAVDQLVKFNKALADYSMADKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYCDLRLLNAKAVVAALMK 624

HSP 3 Score: 119.013 bits (297), Expect = 4.599e-27
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFL------WDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q    + T  VN+LI+S++LQ++   N YNH+ ++L+Y +DNQF+LV+VV YQ +L L+Y DK +  +   FRDKY+N ++    L      ++F D  + +       + +  ++    M  F++S K+ KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGVPASFTGPVNALIRSVILQERGGNNYYNHDSLTLKYKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRDKYRNQIQHNGTLGLLNGSFEFQDDFNTI---LRAAEESSKARAPPAMKRFEQSLKSQKTVKSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Xenopus
Match: SRPRA (SRP receptor subunit alpha [Source:NCBI gene;Acc:100271764])

HSP 1 Score: 259.225 bits (661), Expect = 1.200e-75
Identity = 122/192 (63.54%), Postives = 149/192 (77.60%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
             GMF MLK  VG     LT E M PVLE +K HLI KNVA+++A++LC  VAKKL GK +G  E V++ ++++L++S  ++L   RR+D+LRDV+EA+   RPYVI+FCGVNGVGKSTNLAKISFWLIE GF V+IAACDTFR+GAVEQLR H Q+LN  HPPE+H G  MVQLYEKGYGKDAA +A  AIS
Sbjct:  228 GGMFGMLKGLVGAKS--LTMEDMEPVLEKMKDHLIAKNVAADIAVQLCESVAKKLEGKVMGTFETVTSSVKQALQESLVQILQPKRRVDILRDVMEAQHLRRPYVITFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTQRLNSRHPPEKHKGRTMVQLYEKGYGKDAAGIAMEAIS 417

HSP 2 Score: 206.453 bits (524), Expect = 1.100e-56
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFNKAL DYS +D PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  419 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNVPDLVLFVGEALVGNEAVDQLVKFNKALADYSMADKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYCDLRLLNAKAVVAALMK 547

HSP 3 Score: 117.857 bits (294), Expect = 7.044e-27
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFL------WDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q    + T  VN+LI+S++LQ++   N YNH+ ++L+Y +DNQF+LV+VV YQ +L L+Y DK +  +   FRDKY+N ++    L      ++F D  + +       + +  ++    M  F++S K+ KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGVPASFTGPVNALIRSVILQERGGNNYYNHDSLTLKYKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRDKYRNQIQHNGTLGLLNGSFEFQDDFNTI---LRAAEESSKARAPPAMKRFEQSLKSQKTVKSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Xenopus
Match: SRPRA (SRP receptor subunit alpha [Source:NCBI gene;Acc:100271764])

HSP 1 Score: 261.151 bits (666), Expect = 1.526e-75
Identity = 125/197 (63.45%), Postives = 153/197 (77.66%), Query Frame = 3 
Query: 1026 KKSN--GMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            KKS+  GMF MLK  VG     LT E M PVLE +K HLI KNVA+++A++LC  VAKKL GK +G  E V++ ++++L++S  ++L   RR+D+LRDV+EA+   RPYVI+FCGVNGVGKSTNLAKISFWLIE GF V+IAACDTFR+GAVEQLR H Q+LN  HPPE+H G  MVQLYEKGYGKDAA +A  AIS
Sbjct:  296 KKSSFGGMFGMLKGLVGAKS--LTMEDMEPVLEKMKDHLIAKNVAADIAVQLCESVAKKLEGKVMGTFETVTSSVKQALQESLVQILQPKRRVDILRDVMEAQHLRRPYVITFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTQRLNSRHPPEKHKGRTMVQLYEKGYGKDAAGIAMEAIS 490

HSP 2 Score: 206.453 bits (524), Expect = 4.652e-56
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFNKAL DYS +D PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  492 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNVPDLVLFVGEALVGNEAVDQLVKFNKALADYSMADKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYCDLRLLNAKAVVAALMK 620

HSP 3 Score: 118.627 bits (296), Expect = 6.356e-27
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFL------WDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q    + T  VN+LI+S++LQ++   N YNH+ ++L+Y +DNQF+LV+VV YQ +L L+Y DK +  +   FRDKY+N ++    L      ++F D  + +       + +  ++    M  F++S K+ KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGVPASFTGPVNALIRSVILQERGGNNYYNHDSLTLKYKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRDKYRNQIQHNGTLGLLNGSFEFQDDFNTI---LRAAEESSKARAPPAMKRFEQSLKSQKTVKSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Xenopus
Match: SRPRA (SRP receptor subunit alpha [Source:NCBI gene;Acc:100271764])

HSP 1 Score: 260.766 bits (665), Expect = 3.934e-75
Identity = 122/192 (63.54%), Postives = 149/192 (77.60%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
             GMF MLK  VG     LT E M PVLE +K HLI KNVA+++A++LC  VAKKL GK +G  E V++ ++++L++S  ++L   RR+D+LRDV+EA+   RPYVI+FCGVNGVGKSTNLAKISFWLIE GF V+IAACDTFR+GAVEQLR H Q+LN  HPPE+H G  MVQLYEKGYGKDAA +A  AIS
Sbjct:  329 GGMFGMLKGLVGAKS--LTMEDMEPVLEKMKDHLIAKNVAADIAVQLCESVAKKLEGKVMGTFETVTSSVKQALQESLVQILQPKRRVDILRDVMEAQHLRRPYVITFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTQRLNSRHPPEKHKGRTMVQLYEKGYGKDAAGIAMEAIS 518

HSP 2 Score: 206.068 bits (523), Expect = 9.811e-56
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFNKAL DYS +D PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  520 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNVPDLVLFVGEALVGNEAVDQLVKFNKALADYSMADKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYCDLRLLNAKAVVAALMK 648

HSP 3 Score: 119.013 bits (297), Expect = 5.875e-27
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFL------WDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q    + T  VN+LI+S++LQ++   N YNH+ ++L+Y +DNQF+LV+VV YQ +L L+Y DK +  +   FRDKY+N ++    L      ++F D  + +       + +  ++    M  F++S K+ KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGVPASFTGPVNALIRSVILQERGGNNYYNHDSLTLKYKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRDKYRNQIQHNGTLGLLNGSFEFQDDFNTI---LRAAEESSKARAPPAMKRFEQSLKSQKTVKSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Xenopus
Match: SRPRA (SRP receptor subunit alpha [Source:NCBI gene;Acc:100271764])

HSP 1 Score: 257.684 bits (657), Expect = 1.277e-74
Identity = 122/192 (63.54%), Postives = 149/192 (77.60%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
             GMF MLK  VG     LT E M PVLE +K HLI KNVA+++A++LC  VAKKL GK +G  E V++ ++++L++S  ++L   RR+D+LRDV+EA+   RPYVI+FCGVNGVGKSTNLAKISFWLIE GF V+IAACDTFR+GAVEQLR H Q+LN  HPPE+H G  MVQLYEKGYGKDAA +A  AIS
Sbjct:  276 GGMFGMLKGLVGAKS--LTMEDMEPVLEKMKDHLIAKNVAADIAVQLCESVAKKLEGKVMGTFETVTSSVKQALQESLVQILQPKRRVDILRDVMEAQHLRRPYVITFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTQRLNSRHPPEKHKGRTMVQLYEKGYGKDAAGIAMEAIS 465

HSP 2 Score: 206.838 bits (525), Expect = 2.277e-56
Identity = 101/129 (78.29%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFNKAL DYS +D PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  467 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNVPDLVLFVGEALVGNEAVDQLVKFNKALADYSMADKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYCDLRLLNAKAVVAALMK 595

HSP 3 Score: 117.087 bits (292), Expect = 1.567e-26
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFL------WDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q    + T  VN+LI+S++LQ++   N YNH+ ++L+Y +DNQF+LV+VV YQ +L L+Y DK +  +   FRDKY+N ++    L      ++F D  + +       + +  ++    M  F++S K+ KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGVPASFTGPVNALIRSVILQERGGNNYYNHDSLTLKYKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRDKYRNQIQHNGTLGLLNGSFEFQDDFNTI---LRAAEESSKARAPPAMKRFEQSLKSQKTVKSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Mouse
Match: Srpr (signal recognition particle receptor ('docking protein') [Source:MGI Symbol;Acc:MGI:1914648])

HSP 1 Score: 325.094 bits (832), Expect = 4.069e-99
Identity = 207/542 (38.19%), Postives = 310/542 (57.20%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM--TNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKEN-RKWTNEATGI-EADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLE-GQLADIXXXXXXXXXXXXXXXYQKEIKTE-SKPQKKSNGMFSMLKSWVGVHGG-VLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ++   N + HE ++L+Y +DNQF+LV+VV +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM  T       K + +K    K E ++  +        +   L+   E    SK   I + R + ++        S   S   ++ + K KGK+  R W  E  G    + L+YS     NG  E  LS          E++N ++G    GQL D++  S              E  T+ +KP      +  M     G+ G   L+ E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R+ RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVEQLR H ++L  +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKRGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKS---SKSTKSDTPKEKGKKAPRVW--ELGGCANKEVLDYSTP-TTNGTPEAALS----------EDINLIRGTGPGGQLQDLDCSSS-----------DDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF 506

HSP 2 Score: 199.519 bits (506), Expect = 1.083e-53
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  507 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 635
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Mouse
Match: Srpr (signal recognition particle receptor ('docking protein') [Source:MGI Symbol;Acc:MGI:1914648])

HSP 1 Score: 136.346 bits (342), Expect = 1.219e-36
Identity = 66/88 (75.00%), Postives = 77/88 (87.50%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDK 2529
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDK
Sbjct:   45 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDK 132

HSP 2 Score: 63.929 bits (154), Expect = 2.530e-11
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 3 
Query: 1482 LRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLG 1616
            LR H ++L  +HPPE+H G  MVQL+EKGYGKDAA +A  AI+  
Sbjct:    1 LRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFA 45
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Mouse
Match: Srp54c (signal recognition particle 54C [Source:MGI Symbol;Acc:MGI:3714359])

HSP 1 Score: 55.8398 bits (133), Expect = 1.886e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQA----KAFKD------KVDVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Mouse
Match: Srp54c (signal recognition particle 54C [Source:MGI Symbol;Acc:MGI:3714359])

HSP 1 Score: 55.8398 bits (133), Expect = 1.886e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQA----KAFKD------KVDVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Mouse
Match: Srp54b (signal recognition particle 54B [Source:MGI Symbol;Acc:MGI:3714357])

HSP 1 Score: 55.8398 bits (133), Expect = 1.935e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQA----KAFKD------KVDVASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. UniProt/SwissProt
Match: sp|Q9DBG7|SRPRA_MOUSE (Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.846e-98
Identity = 207/542 (38.19%), Postives = 310/542 (57.20%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM--TNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKEN-RKWTNEATGI-EADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLE-GQLADIXXXXXXXXXXXXXXXYQKEIKTE-SKPQKKSNGMFSMLKSWVGVHGG-VLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ++   N + HE ++L+Y +DNQF+LV+VV +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM  T       K + +K    K E ++  +        +   L+   E    SK   I + R + ++        S   S   ++ + K KGK+  R W  E  G    + L+YS     NG  E  LS          E++N ++G    GQL D++  S              E  T+ +KP      +  M     G+ G   L+ E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R+ RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVEQLR H ++L  +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKRGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKS---SKSTKSDTPKEKGKKAPRVW--ELGGCANKEVLDYSTP-TTNGTPEAALS----------EDINLIRGTGPGGQLQDLDCSSS-----------DDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF 506

HSP 2 Score: 199.519 bits (506), Expect = 7.576e-53
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  507 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 635
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. UniProt/SwissProt
Match: sp|Q3MHE8|SRPRA_BOVIN (Signal recognition particle receptor subunit alpha OS=Bos taurus OX=9913 GN=SRPRA PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 4.794e-69
Identity = 110/193 (56.99%), Postives = 148/193 (76.68%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
             GMF MLK  VG     LT E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R  RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVEQLR H ++L+ +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:  319 GGMFGMLKGLVGSKS--LTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF 509

HSP 2 Score: 198.749 bits (504), Expect = 1.607e-52
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  510 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 638

HSP 3 Score: 118.627 bits (296), Expect = 4.003e-26
Identity = 62/161 (38.51%), Postives = 99/161 (61.49%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ++   N + HE ++L+Y +DNQF+LV+VV +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. UniProt/SwissProt
Match: sp|P08240|SRPRA_HUMAN (Signal recognition particle receptor subunit alpha OS=Homo sapiens OX=9606 GN=SRPRA PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 1.150e-68
Identity = 109/193 (56.48%), Postives = 149/193 (77.20%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
             GMF MLK  VG     L+ E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R+ RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVEQLR H ++L+ +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:  318 GGMFGMLKGLVGSKS--LSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAF 508

HSP 2 Score: 198.749 bits (504), Expect = 1.259e-52
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  509 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637

HSP 3 Score: 118.627 bits (296), Expect = 4.090e-26
Identity = 62/161 (38.51%), Postives = 99/161 (61.49%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ++   N + HE ++L+Y +DNQF+LV+VV +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. UniProt/SwissProt
Match: sp|P06625|SRPRA_CANLF (Signal recognition particle receptor subunit alpha OS=Canis lupus familiaris OX=9615 GN=SRPRA PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 2.628e-67
Identity = 107/193 (55.44%), Postives = 147/193 (76.17%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
             GMF MLK  VG     L+ E M  VL+ ++ HLI KNVA+++A++LC  VA KL GK +G    V++ ++++L++S  ++L   RR+D+LRD+++A+R  RPYV++FCGVNGVGKSTNLAKISFWL+E GF V+IAACDTFR+GAVE +R H ++L+ +HPPE+H G  MVQL+EKGYGKDAA +A  AI+ 
Sbjct:  318 GGMFGMLKGLVGSKS--LSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIAF 508

HSP 2 Score: 198.364 bits (503), Expect = 1.896e-52
Identity = 96/129 (74.42%), Postives = 112/129 (86.82%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S +  PR I+GIVLTKFDTIDDKVGAAISMTYI  +PI+FVGTGQTY DLR L+ +AVV +LMK
Sbjct:  509 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637

HSP 3 Score: 118.627 bits (296), Expect = 4.090e-26
Identity = 62/161 (38.51%), Postives = 99/161 (61.49%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMS-----------KPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGGLVL W  Q  +++ T  VN+LI+S++LQ++   N + HE ++L+Y +DNQF+LV+VV +Q +L L+Y DK +  +   FRDKY+  ++ Q+ L       S+++ TF   +N+F+            +    M  F++S KA K ++SM
Sbjct:    1 MLDFFTIFSKGGLVL-WCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSAL-------SLLNGTF-DFQNDFLRLLREREESSKIRAPTTMKKFEDSEKAKKPVRSM 152
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. UniProt/SwissProt
Match: sp|Q9U5L1|SRPRA_DROME (Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster OX=7227 GN=Gtp-bp PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 1.941e-66
Identity = 112/208 (53.85%), Postives = 148/208 (71.15%), Query Frame = 3 
Query:  993 QKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLG 1616
            + E + +SK  K+  G+ S  K  VG     L + Q  P LE ++ HLI+KNVASE+A +LC+ VA  L GK++G  + ++++++E+L +S  ++L+  RRID++RD +E+KR GRPY I FCGVNGVGKSTNLAKI FWLIE  F V+IAACDTFR+GAVEQLR H + LN +HP  +H G  MVQLYEKGYGKDAA +A  AI   
Sbjct:  282 EAEEQVQSKKGKRG-GLLSYFKGIVGAKTMSLADLQ--PALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFA 486

HSP 2 Score: 205.297 bits (521), Expect = 5.825e-55
Identity = 98/129 (75.97%), Postives = 114/129 (88.37%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A +   DVV++DT+GRMQDNEPLMRSL+KLI VN PDLVLFVGEALVG+EAVDQLVKFN++L DYS +++P  I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTYADL+ ++  AVV SLMK
Sbjct:  486 AHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 614

HSP 3 Score: 84.3445 bits (207), Expect = 1.964e-15
Identity = 47/157 (29.94%), Postives = 87/157 (55.41%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHE-LVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWD--FSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNEN 503
            M+D   IF+KGG+VL W+      +    +NSLI+ ++L+++ ++  Y  E  +++Q+ +DN+ DLVY   +Q V++L+Y D FL  +   F++KY ++    ++ +D  +   +S  +            K  K M S+ ES K+ KT+ SM  ++
Sbjct:    1 MLDFVVIFTKGGVVL-WHSNASGNSFASCINSLIRGVILEERNTEAKYYEEDHLAVQFKLDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSAAEEASAK-----QVKAPKTMRSYNESQKSKKTVASMIQDD 151
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. TrEMBL
Match: A0A5K3EM39 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 2.042e-130
Identity = 239/540 (44.26%), Postives = 331/540 (61.30%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVK--NNFMSKPKKEMISFQESYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQ--------LSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQK-----KSNGMFSMLKSWV--GVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            M+D F I S+GG+VL WYI+N  E +  ++N+ +KS++L++ I    + HE  +L++ MDN+FDL+++  YQ VL+LSY DKFLT IALEFRDKYKN L  +N    F  F S  DS    V+  +   S+P K M +F +S K+ KT+ SM     K       K +         +  + +      K +N      L S  A++AK+R         K+  +P+DSP      KK  GK NR+WTNEATG EA AL+YS     NG  E +        +    +LT  + E L KL+G L+    D    S  ++ E+    ++++ ++ ++P       KS+G  S L   +     G VLT E +   LE L+ HL+ KNVA E+A  LC+GVA++LVG +LG  ERV  ++R +LE++C +LL  GRR+DVLRD +EA++  +PYVI FCGVNGVGKSTNLAKI+FWLIE+  +V+IAACDTFRSGAVEQLR HVQKLN+IHPPE+H G  MV+L+EKGYGKDAA++A  A+S
Sbjct:    1 MLDFFVILSRGGIVL-WYIKNTTECIKTTINTFLKSLILKENIGNAAFVHESFALKHLMDNEFDLLFIAGYQQVLQLSYVDKFLTMIALEFRDKYKNDLLEKNLYGYFEGFRSCFDSNLRAVEEESRRSSRPAKSMRTFADSEKSKKTIASMIVNKDKQGANSTDKPSVIHRSTPPPLSESNVDHSLQPKKVN------LLSPKARMAKSR-------KLKESSTPSDSPTCPKPGKK--GKVNRRWTNEATGAEAAALDYSAGATSNGVSESENQNGGDKVIGQGLRLTASEAESLAKLRGTLQEGF-DQLEVSSDENEEDEIPSFEEDGQSLTRPHAENGTTKSSGFLSGLIQNLKTTATGRVLTHEDIKKPLEQLRDHLVHKNVAYEIANRLCDGVAERLVGVQLGRFERVGPRVRAALEEACTRLLASGRRVDVLRDALEAQQSRKPYVIVFCGVNGVGKSTNLAKIAFWLIEKNLKVLIAACDTFRSGAVEQLRTHVQKLNFIHPPERHDGHTMVELFEKGYGKDAASIAMSAVS 523

HSP 2 Score: 209.149 bits (531), Expect = 1.292e-53
Identity = 98/129 (75.97%), Postives = 117/129 (90.70%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            AK++H DVV++DT+GRMQDNEPLMRSLAKLI VN+PDLVLFVGEALVG+EA+DQLVKFN++L D+S +  P TI+GIVLTKFDTIDDKVGAA+SM +I GQPI+FVGTGQTY+DLRQ S  +VVK+LMK
Sbjct:  525 AKDRHLDVVLVDTAGRMQDNEPLMRSLAKLIIVNEPDLVLFVGEALVGNEAIDQLVKFNQSLADFSSTAKPHTIDGIVLTKFDTIDDKVGAAVSMAHISGQPIVFVGTGQTYSDLRQFSVASVVKALMK 653
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. TrEMBL
Match: A0A0R3UGB6 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS6253 PE=4 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 2.906e-128
Identity = 236/547 (43.14%), Postives = 331/547 (60.51%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNN---------FMSKPKKEMISFQESYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQ--------LSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQK-----KSNGMFSMLKSWV--GVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            M+D F I S+GG+VL WYI+N  E +  ++N+ +KS++L++ I    + HE  +L++ MDN+FDL+++  YQ VL+LSY DKFLT IALEFRDKYKN L  +N    F  F S  DS    V+           ++ + ++ M +F +S K+ KT+ SM     K       K +         +  + +      K +N      L S  A++AK+R         K+  +P+DSP      KK  GK NR+WTNEATG EA AL+YS     NG  E +        +    +LT  + E L KL+G L+    D    S  ++ E+    ++++ ++ ++P       KS+G  S L   +     G VLT E +   LE L+ HL+ KNVA E+A  LC+GVA++LVG +LG  ERV  ++R +LE++C +LL  GRR+DVLRD +EA++  +PYVI FCGVNGVGKSTNLAKI+FWLIE+  +V+IAACDTFRSGAVEQLR HVQKLN+IHPPE+H G  MV+L+EKGYGKDAA++A  A+S
Sbjct:    1 MLDFFVILSRGGIVL-WYIKNTTECIKTTINTFLKSLILKENIGNAAFVHESFALKHLMDNEFDLLFIAGYQQVLQLSYVDKFLTMIALEFRDKYKNDLLEKNLYGYFEGFRSCFDSNLRAVEEESRRSSRPAKYLERNRRSMRTFADSEKSKKTIASMIVNKDKQGANSTDKPSVIHRSTPPPLSESNVDHSLQPKKVN------LLSPKARMAKSR-------KLKESSTPSDSPTCPKPGKK--GKVNRRWTNEATGAEAAALDYSAGATSNGVSESENQNGGDKVIGQGLRLTASEAESLAKLRGTLQEGF-DQLEVSSDENEEDEIPSFEEDGQSLTRPHAENGTTKSSGFLSGLIQNLKTTATGRVLTHEDIKKPLEQLRDHLVHKNVAYEIANRLCDGVAERLVGVQLGRFERVGPRVRAALEEACTRLLASGRRVDVLRDALEAQQSRKPYVIVFCGVNGVGKSTNLAKIAFWLIEKNLKVLIAACDTFRSGAVEQLRTHVQKLNFIHPPERHDGHTMVELFEKGYGKDAASIAMSAVS 530

HSP 2 Score: 209.149 bits (531), Expect = 1.579e-53
Identity = 98/129 (75.97%), Postives = 117/129 (90.70%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            AK++H DVV++DT+GRMQDNEPLMRSLAKLI VN+PDLVLFVGEALVG+EA+DQLVKFN++L D+S +  P TI+GIVLTKFDTIDDKVGAA+SM +I GQPI+FVGTGQTY+DLRQ S  +VVK+LMK
Sbjct:  532 AKDRHLDVVLVDTAGRMQDNEPLMRSLAKLIIVNEPDLVLFVGEALVGNEAIDQLVKFNQSLADFSSTAKPHTIDGIVLTKFDTIDDKVGAAVSMAHISGQPIVFVGTGQTYSDLRQFSVASVVKALMK 660
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. TrEMBL
Match: A0A4S2MIF7 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_001144 PE=4 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 1.029e-122
Identity = 222/540 (41.11%), Postives = 331/540 (61.30%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTF--LTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQ---LSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXX-XXXXXXYQKEIKTESKPQKKSNG---------MFSMLKSW--VGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            M+D F I +KGG+ L W   +  E    S+N+ +KS++L++   ++P+ H+  +++ +MDN+F+L+++ AYQ++L+L+Y DKFLT+IALEFRDKYKN L + N +  F +   +   T   + +++  + K  K M +F ES K+ KT+ SM         I   K +++     ++         +  ++L  + E+ L  K  K+A+   K   +   K+  SPT SP+ +   K++K  E+R+W N A+G EA AL++S  +    NK +    LS  E  T      L++L+G ++  L ++   SD +        +   E    + P  K NG         + S+LK     G +G +LT E + P LE L+  L+ KNVA E+A  +C+ VA++LVG  LG  ER+ T++R SLE+ C ++L+ GRR+DVLRD ++A+ QG+PY I FCGVNGVGKSTNLAKI+FWLIE+ FRV+IAACDTFRSGAVEQLR HV KLNYIHPPEQH G  MV+LYE+GYG+DAA++A  AI+
Sbjct:    1 MLDFFVILTKGGIRL-WCFPSTVEMFRVSINTFLKSLILKENAGQSPFVHDSRAIKMHMDNEFNLLFIAAYQNILQLTYVDKFLTSIALEFRDKYKNELRANNIMCKFDELAGLYTETLKRIELEDRALRKCAKPMRTFDESEKSKKTVASMI--------ISGPKKSERVAPEKKASKTESPKLSESHETLTDSAEDMLAQKRRKLAE---KLKASKKPKESTSPTSSPLQKPNGKRIK--ESRRWDNAASGEEAAALDFSGSIGAGENKGKADYILSKSEAAT------LSRLRGTMKNDLDEVHVSSDEEEEFVIEPAEVAYETAESAAPNSKENGDVKDNRGGLVSSLLKGLRLPGGNGRILTREDIAPSLEQLRDRLVAKNVAVEIAQRVCDSVAERLVGTPLGAFERIYTRVRTSLEEVCTRVLSSGRRVDVLRDALDARSQGKPYTIVFCGVNGVGKSTNLAKIAFWLIEKNFRVLIAACDTFRSGAVEQLRTHVHKLNYIHPPEQHGGQKMVELYEQGYGRDAASIARSAIN 520
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. TrEMBL
Match: A0A0R3WZL0 (SRP54 domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS6224 PE=4 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 6.898e-122
Identity = 235/573 (41.01%), Postives = 326/573 (56.89%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMSKPK--KEMISFQESYKAAKTLKSM--TNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYS-------KKLELNGNKEEQLSLQE-KLTVEDLEELNKLKGRLEGQLADIXXXX-----------XXXXXXXXXXXYQKEIKTES--------------------------KPQKKSNGMFSMLKSWVGVHGG-VLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            M+D F I ++GG+VL WY+++ +E +  ++N+ +KS++LQ+ +S   + HE ++++++MDN+FDL+Y+  YQ VL+LSY DKFLT IALEFRDKYKN L  +N    F DF  + DS    ++++ +   K  K M SF +S K+ KT+ SM    EN   +                            DK  N A  ESL+S    +    G              ++SP+     K++  K NR+WTNEA G EA AL+YS           L  +  + ++ Q  +LT  ++E L KL+G L     ++E  S           + +   +     + EIK  +                           P K    M  +L++      G VLT E +   LE L+ HL+ KNVA E+A  LC+GVA+ LVG +LG  ERV +++R +LE++C +LL  GRR+DVLRD +EA++ GRPYVI FCGVNGVGKSTNLAKI+FWLIE+ F+V+IAACDTFRSGAVEQLR HVQKLN+IHPPE H G  MV+LYEKGYGKDAA +A  AIS
Sbjct:    1 MLDFFVILTRGGIVL-WYMKSTSECIRTAINAFLKSLILQENLSNGVFAHESIAMKHFMDNEFDLLYIAGYQRVLQLSYVDKFLTVIALEFRDKYKNKLLEKNRFGYFDDFAPIFDSKLCEIESDSLKSIKSVKPMRSFADSAKSKKTIASMIINKENQHSTSAT-------------------------DKRANLA--ESLDSGEPILDSKIGI------------ASESPVSGKPGKRI--KVNRRWTNEAVGAEAAALDYSNGGGAVISSGTLAHDGTDLVASQGLQLTASEVENLTKLRGTLREGFDELEVSSDEEEYACSSEDEEEQESKASSRSRNEIKANNLLNFVSFSRIAFIHVFSYVICVTSILTPNKSFGFMSGLLQNLKSTATGRVLTSEDIRNPLEQLRDHLVQKNVAFEIANRLCDGVAESLVGVQLGRFERVGSRVRAALEEACTRLLASGRRVDVLRDALEAQQSGRPYVIVFCGVNGVGKSTNLAKIAFWLIEKNFKVLIAACDTFRSGAVEQLRTHVQKLNFIHPPEHHGGQTMVELYEKGYGKDAANIAMSAIS 531

HSP 2 Score: 200.675 bits (509), Expect = 1.430e-50
Identity = 96/129 (74.42%), Postives = 113/129 (87.60%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            AKEK  DVV++DT+GRMQDNEPLMR+LAKLI VN+PDLVLFVGEALVG+EA+DQLVKFN++L DY  +     I+GIVLTKFDTIDDKVGAA+SM +I GQPI+FVGTGQTY+DLRQ S  +VVK+LMK
Sbjct:  533 AKEKQRDVVLVDTAGRMQDNEPLMRALAKLIIVNEPDLVLFVGEALVGNEAIDQLVKFNQSLVDYGNAAKSHAIDGIVLTKFDTIDDKVGAAVSMAHISGQPIVFVGTGQTYSDLRQFSVPSVVKALMK 661
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. TrEMBL
Match: A0A4S2MBW8 (SRP54 domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_001144 PE=4 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 1.449e-121
Identity = 222/540 (41.11%), Postives = 331/540 (61.30%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTF--LTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQ---LSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXX-XXXXXXYQKEIKTESKPQKKSNG---------MFSMLKSW--VGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            M+D F I +KGG+ L W   +  E    S+N+ +KS++L++   ++P+ H+  +++ +MDN+F+L+++ AYQ++L+L+Y DKFLT+IALEFRDKYKN L + N +  F +   +   T   + +++  + K  K M +F ES K+ KT+ SM         I   K +++     ++         +  ++L  + E+ L  K  K+A+   K   +   K+  SPT SP+ +   K++K  E+R+W N A+G EA AL++S  +    NK +    LS  E  T      L++L+G ++  L ++   SD +        +   E    + P  K NG         + S+LK     G +G +LT E + P LE L+  L+ KNVA E+A  +C+ VA++LVG  LG  ER+ T++R SLE+ C ++L+ GRR+DVLRD ++A+ QG+PY I FCGVNGVGKSTNLAKI+FWLIE+ FRV+IAACDTFRSGAVEQLR HV KLNYIHPPEQH G  MV+LYE+GYG+DAA++A  AI+
Sbjct:    1 MLDFFVILTKGGIRL-WCFPSTVEMFRVSINTFLKSLILKENAGQSPFVHDSRAIKMHMDNEFNLLFIAAYQNILQLTYVDKFLTSIALEFRDKYKNELRANNIMCKFDELAGLYTETLKRIELEDRALRKCAKPMRTFDESEKSKKTVASMI--------ISGPKKSERVAPEKKASKTESPKLSESHETLTDSAEDMLAQKRRKLAE---KLKASKKPKESTSPTSSPLQKPNGKRIK--ESRRWDNAASGEEAAALDFSGSIGAGENKGKADYILSKSEAAT------LSRLRGTMKNDLDEVHVSSDEEEEFVIEPAEVAYETAESAAPNSKENGDVKDNRGGLVSSLLKGLRLPGGNGRILTREDIAPSLEQLRDRLVAKNVAVEIAQRVCDSVAERLVGTPLGAFERIYTRVRTSLEEVCTRVLSSGRRVDVLRDALDARSQGKPYTIVFCGVNGVGKSTNLAKIAFWLIEKNFRVLIAACDTFRSGAVEQLRTHVHKLNYIHPPEQHGGQKMVELYEQGYGRDAASIARSAIN 520

HSP 2 Score: 215.698 bits (548), Expect = 7.772e-56
Identity = 102/129 (79.07%), Postives = 119/129 (92.25%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+++H DVV++DT+GRMQDNEPLMR+LA LI++NQPDLVLFVGEALVG+EAVDQLVKFN++L D+S +D PRTI+GIVLTKFDTIDDKVGAAISM YI  QPI+FVGTGQTYADLRQLS  AVVK+LMK
Sbjct:  522 ARDRHLDVVLVDTAGRMQDNEPLMRALASLIHMNQPDLVLFVGEALVGNEAVDQLVKFNQSLADHSMADKPRTIDGIVLTKFDTIDDKVGAAISMAYISSQPIVFVGTGQTYADLRQLSVGAVVKALMK 650
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Cavefish
Match: srpra (SRP receptor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030219-11])

HSP 1 Score: 256.529 bits (654), Expect = 1.516e-74
Identity = 118/199 (59.30%), Postives = 154/199 (77.39%), Query Frame = 3 
Query: 1017 KPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 1613
            + +K   GMF MLK  VG     LT+  M PVLE +K HLI KNVA+++A +LC+ VAKKL GK +G    V++ ++++L+DS  ++L   RR+D+LRDV+EA+ Q +P+VI+FCGVNGVGKSTNLAKIS+WLIE GF V+IAACDTFR+GAVEQLR H ++LN +HPPEQH G P+VQL+EKGYGKDAA +A  AI+ 
Sbjct:  258 RGRKGFGGMFGMLKGLVGSK--TLTQLDMEPVLEKMKDHLIAKNVAADIASQLCDSVAKKLEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRDVLEARAQRKPFVITFCGVNGVGKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPEQHGGRPVVQLFEKGYGKDAAGIAMEAIAF 454

HSP 2 Score: 208.764 bits (530), Expect = 1.990e-57
Identity = 100/129 (77.52%), Postives = 115/129 (89.15%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S SDHPR ++GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY+DLR L+  AVV +LMK
Sbjct:  455 ARNQSFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFNQALADHSMSDHPRLLDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYSDLRSLNARAVVNALMK 583

HSP 3 Score: 97.0561 bits (240), Expect = 2.378e-20
Identity = 43/96 (44.79%), Postives = 66/96 (68.75%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNG--AENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDK 323
            M+D F+IFSKGGLVL W  Q    + +    VN+LI+S++LQ++   + + H  +SL+Y +DN+F+LV+VV +Q  L L+Y DKF+  + L FRD+
Sbjct:    1 MLDFFSIFSKGGLVL-WCFQGAGVSGSFAGPVNALIRSVILQERTGNSSFTHNALSLKYKLDNEFELVFVVGFQKFLTLTYVDKFIDDVQLHFRDR 95
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Cavefish
Match: srp54 (signal recognition particle 54 [Source:NCBI gene;Acc:103042553])

HSP 1 Score: 56.6102 bits (135), Expect = 1.004e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KSENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQA----KAFKDKV------DVASVIITKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Sea Lamprey
Match: srpra (SRP receptor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030219-11])

HSP 1 Score: 240.736 bits (613), Expect = 4.756e-69
Identity = 112/190 (58.95%), Postives = 143/190 (75.26%), Query Frame = 3 
Query: 1035 NGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYA 1604
             G+F MLK  VG     LT E + PVLE +K HLI KNVA+E++L+LC  VA KL GK  G  + V++ ++++L+DS  K+L   R +D+LRDVIEAK++ +PYVI+FCGVNGVGKSTNLAK  FWLIE  F V++AACDTFR+GAVEQLR H + L+ +HPPE H G PMVQL+E+GYGKDAA +A  A
Sbjct:  314 GGVFGMLKGLVGSKS--LTREDLEPVLEKMKDHLIAKNVAAEISLQLCESVANKLEGKVQGTFKTVTSTVKQALQDSLLKILQPKRHVDILRDVIEAKKKKQPYVITFCGVNGVGKSTNLAKTCFWLIENEFSVLVAACDTFRAGAVEQLRTHTRHLSALHPPENHGGRPMVQLFERGYGKDAAGIAMEA 501

HSP 2 Score: 192.2 bits (487), Expect = 5.329e-52
Identity = 95/129 (73.64%), Postives = 110/129 (85.27%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A  +  DVV++DT+GRMQ+N PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D S  + PR I+GIVLTKFDTIDDKVGAA+SMTYI GQPI+FVGTGQTY DLR+L  E+VV +LMK
Sbjct:  505 ATSQGVDVVLVDTAGRMQNNTPLMVALAKLIAVNIPDLVLFVGEALVGNEAVDQLVKFNRALADNSHMEKPRLIDGIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGTGQTYCDLRRLDVESVVHALMK 633

HSP 3 Score: 117.087 bits (292), Expect = 2.633e-27
Identity = 68/159 (42.77%), Postives = 103/159 (64.78%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFL------WDFS-DFISVVDSTFLTVKNNFMSKPKKE--MISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q      T+ VN+LI+S++LQ+K S N ++HE + L+Y +DN+F+LV+VV YQ +L L+Y DKF+  I  EFRDKY+N L+ +  L      ++FS DF  ++   + + + N  S+   E    +F E+ + +KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGVNGCFTEPVNALIRSVILQEKGSNNSFSHEALMLKYKLDNEFELVFVVGYQKILTLTYVDKFVDDIHKEFRDKYRNELQQKGVLGLINGSFEFSADFQRML---WPSRQYNDHSESGSESYCYTFWEATETSKTVKSM 155
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Sea Lamprey
Match: srp54 (signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818])

HSP 1 Score: 55.0694 bits (131), Expect = 5.355e-8
Identity = 32/127 (25.20%), Postives = 60/127 (47.24%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  E L   + ++ N   PD +++V +A +G     Q   F   +           +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KRENFEIIVVDTSGRHKQEESLFEEMLQVSNAVNPDNIVYVMDASIGQACEAQARAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLL 295

HSP 2 Score: 48.1358 bits (113), Expect = 8.261e-6
Identity = 19/57 (33.33%), Postives = 36/57 (63.16%), Query Frame = 3 
Query: 1332 QGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQK 1502
            +G+  +I F G+ G GK+T   K++++   +G++  +   DTFR+GA +QL+ +  K
Sbjct:   98 KGKHNIIMFVGLQGSGKTTTCTKLAYYYQRKGWKACLVCADTFRAGAFDQLKQNATK 154
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Yeast
Match: SRP101 (Signal recognition particle (SRP) receptor alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with the beta subunit, Srp102p [Source:SGD;Acc:S000002700])

HSP 1 Score: 140.584 bits (353), Expect = 4.133e-35
Identity = 79/180 (43.89%), Postives = 103/180 (57.22%), Query Frame = 3 
Query: 1083 VLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGR-------PYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGL---------PMVQLYEKGYG 1574
             + E  +  VLE L   LITKNVA E A  L   V+  LVG +      V    RESL  +  ++L  G  +D+LR+ I++KR  +       PYV S  GVNGVGKSTNL+K++FWL++  F+V+I ACDTFRSGAVEQLRVHV+ L  +       G            V+L+E GYG
Sbjct:  305 TINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLRE-IQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAGYG 483

HSP 2 Score: 100.523 bits (249), Expect = 2.879e-22
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            +++++FD+V++DT+GR  ++  LM  L    +  +PD ++ VGEALVG ++V Q   FN A          R ++  +++K DT+ + +G  ++M Y  G PI+FVG GQTY DLR LS +  V +LM
Sbjct:  499 SRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVGEALVGTDSVQQAKNFNDAF------GKGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 620
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Yeast
Match: SRP54 (Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain [Source:SGD;Acc:S000006292])

HSP 1 Score: 71.633 bits (174), Expect = 2.227e-13
Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK*FLSLHDVSTDFFTVQTL 2706
            K++ FD++++DTSGR    E L + + ++ NV +P+  + V +A +G  A  Q    +KA ++ S          I+LTK D    + G AIS       PI+F+GTG+   DL + SP++ +  L    L + D+ + F  +QT+
Sbjct:  188 KKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ----SKAFKESS------DFGAIILTKMDG-HARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKL----LGIGDIESLFEQLQTV 318

HSP 2 Score: 49.6766 bits (117), Expect = 1.674e-6
Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 3 
Query: 1347 VISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLR 1487
            +I F G+ G GK+T+  K++ +  ++GF+V +   DTFR+GA +QL+
Sbjct:  111 IIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLK 157
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Nematostella
Match: EDO46043 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR36])

HSP 1 Score: 246.899 bits (629), Expect = 5.002e-71
Identity = 133/294 (45.24%), Postives = 185/294 (62.93%), Query Frame = 3 
Query:  759 KENRKWTNEATGIEADALNYS----KKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKP----QKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLG 1616
            KE RKW     G E + L++S       + NG  +E          EDL ++  + G ++G +  +E ESD +     E        TE +P    Q  +  +FS  K   G     L +EQ+ PVLE +K HL +KNVA++++ +LC+ VA KL GK +G    +++ ++ SLE+S  ++L+  RR+D+LRD +E KR+G+PYV++FCGVNGVGKSTNLAK+ FWL+E  FRVMIAACDTFR+GAVEQLR HV+ LN +HPP   +G P V LYEKGYGKDAA++A  AI+  
Sbjct:  222 KEARKWAMSGDGKEVETLDFSGTNGSDHQANGKDDE----------EDLIKMKPMIGSMKGNVKPLEYESDSEVELADEM-------TEPQPGQPSQNTNQSVFSFFKGLAGQS--TLAKEQISPVLEKMKEHLTSKNVAADISEKLCDSVATKLEGKVIGTFSGIASTVKSSLEESLIQILSPKRRVDILRDAMENKRKGKPYVVTFCGVNGVGKSTNLAKVCFWLLENNFRVMIAACDTFRAGAVEQLRTHVRHLNALHPPAHANGPPSVLLYEKGYGKDAASIAMDAINFA 496

HSP 2 Score: 197.978 bits (502), Expect = 9.078e-54
Identity = 93/129 (72.09%), Postives = 113/129 (87.60%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+E+  DVV++DT+GRMQDNEPLMR+L+KLI +N PDLVLFVGEALVG+EAVDQL KFN+AL D+S  D PR I+GI+LTKFDTIDD+VGAAISMTY  GQPI+FVGTGQTY DL+ L+ +AVV +L+K
Sbjct:  496 AREQRVDVVLVDTAGRMQDNEPLMRALSKLIKLNDPDLVLFVGEALVGNEAVDQLKKFNQALADHSSQDRPRLIDGILLTKFDTIDDQVGAAISMTYTTGQPIVFVGTGQTYKDLKSLNVKAVVHALLK 624

HSP 3 Score: 125.946 bits (315), Expect = 6.130e-30
Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLES---QNFLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+DLFTIFSKGG+VL W  Q   ++ T  VN LIK ++LQ++   N + H+ ++L+Y +DN+F+LV+VVA+Q +L+LSY DK L  I LEFRDKYK+ L     +NF  +FSD  + +      +       PKK M +F+ES K+ KT+ SM
Sbjct:    1 MLDLFTIFSKGGIVL-WCFQESYQSFTLPVNELIKGVILQERGGSNAFTHDSLTLKYKLDNEFELVFVVAFQKILQLSYIDKLLNDIQLEFRDKYKDELNQGIIRNF--EFSDEFNRILKDAENISKIEAKIPKK-MRTFEESKKSQKTVASM 149
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Nematostella
Match: EDO49574 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGP5])

HSP 1 Score: 63.1586 bits (152), Expect = 2.717e-10
Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            KE++F+++++DTSGR +  E L   + ++ N   PD ++FV +A +G     Q   F + +           +  +++TK D    K G A+S       PI+F+GTG+   D  Q      +  L+
Sbjct:  180 KEENFEIIIVDTSGRHKQEESLFEEMLQVSNAVSPDNIIFVMDATIGQACESQSRAFKEKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTRPFISKLL 295

HSP 2 Score: 48.521 bits (114), Expect = 9.687e-6
Identity = 20/57 (35.09%), Postives = 37/57 (64.91%), Query Frame = 3 
Query: 1332 QGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQK 1502
            +G+  VI F G+ G GK+T  +K++++   +G++  +   DTFR+GA +QL+ +  K
Sbjct:   98 KGKKNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATK 154
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Medaka
Match: srpra (SRP receptor subunit alpha [Source:NCBI gene;Acc:101163921])

HSP 1 Score: 335.88 bits (860), Expect = 2.553e-103
Identity = 220/541 (40.67%), Postives = 308/541 (56.93%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGA--ENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVL----------ESQNFLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQE---SYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKL---KGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            M+D FTIFSKGG+VL W  Q     E+ T  VN+LI+S++LQ++   N + HE  SL+Y +DN+F+L++VV +Q++L L+Y DKF+  + L FRD+YKN L           S  F  DF   +   + T  T    +M        +FQE   S K  K++      +    +  K   + KK          E       K++   ++     ++  I K R    +  I K    PT+ P      +K +GK  R W N  T  +   L+YS K   NG+          +  +DL+  N L   +  ++G L  ++ ES  +   E     +   K  SK      GMF MLK  VG     L++E M PVLE +K HLI KNVA+E+A +LC+ VAKKL GK +G    V++ ++++L+DS  ++L   RR+D+LRDV+EA+ Q RP+VI+FCGVNGVGKSTNLAKIS+WLIE GF V+IAACDTFR+GAVEQLR H ++LN +HPPE+H G P+VQLYEKGYGKDAA +A  AI+
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGAGVKESFTGPVNALIRSVILQERSGSNSFTHERQSLKYKLDNEFELIFVVGFQNILTLTYVDKFIDDVQLRFRDRYKNELVQKGALMLLNNSFEFEDDFQRILREAEETSRTRSTTYMR-------AFQESEKSKKTVKSMIETKGGDKGKEQGGKKSKSSKKEPPAPEPAKVEKPSPPAQKAVQNGNQGLTPEEI--IQKKR----EEFIRKHTAGPTEKPSKSPKPQKPRGKTKRVWDNGGTNTKE--LDYSAK---NGD-------SPGVNDKDLDAHNDLGIQQSSMKGDLLPVDYESSEEEEVEEVVVNEAS-KPSSKKGGGFGGMFGMLKGLVGSKS--LSQEDMEPVLEKMKEHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNALHPPEKHGGQPVVQLYEKGYGKDAAGIAMEAIA 512

HSP 2 Score: 201.445 bits (511), Expect = 1.745e-54
Identity = 99/129 (76.74%), Postives = 113/129 (87.60%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S S+ PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+  AVV +LMK
Sbjct:  514 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVKFNQALADHSMSEKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRSLNARAVVGALMK 642
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Medaka
Match: srpra (SRP receptor subunit alpha [Source:NCBI gene;Acc:101163921])

HSP 1 Score: 249.21 bits (635), Expect = 5.155e-72
Identity = 115/186 (61.83%), Postives = 148/186 (79.57%), Query Frame = 3 
Query: 1053 LKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAIS 1610
            LK  VG     L++E M PVLE +K HLI KNVA+E+A +LC+ VAKKL GK +G    V++ ++++L+DS  ++L   RR+D+LRDV+EA+ Q RP+VI+FCGVNGVGKSTNLAKIS+WLIE GF V+IAACDTFR+GAVEQLR H ++LN +HPPE+H G P+VQLYEKGYGKDAA +A  AI+
Sbjct:  249 LKGLVGSKS--LSQEDMEPVLEKMKEHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNALHPPEKHGGQPVVQLYEKGYGKDAAGIAMEAIA 432

HSP 2 Score: 201.83 bits (512), Expect = 3.271e-55
Identity = 99/129 (76.74%), Postives = 113/129 (87.60%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            A+ + FDVV++DT+GRMQDN PLM +LAKLI VN PDLVLFVGEALVG+EAVDQLVKFN+AL D+S S+ PR I+GIVLTKFDTIDDKVGAAISMTYI GQPI+FVGTGQTY DLR L+  AVV +LMK
Sbjct:  434 ARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVKFNQALADHSMSEKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRSLNARAVVGALMK 562

HSP 3 Score: 80.8777 bits (198), Expect = 2.574e-15
Identity = 55/162 (33.95%), Postives = 76/162 (46.91%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGA--ENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLW----------DFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSM 491
            M+D FTIFSKGG+VL W  Q     E+ T  VN+LI+S++LQ                            V +Q++L L+Y DKF+  + L FRD+YKN L  +  L           DF   +   + T  T    +M        +FQES K+ KT+KSM
Sbjct:    1 MLDFFTIFSKGGIVL-WCFQGAGVKESFTGPVNALIRSVILQ----------------------------VGFQNILTLTYVDKFIDDVQLRFRDRYKNELVQKGALMLLNNSFEFEDDFQRILREAEETSRTRSTTYMR-------AFQESEKSKKTVKSM 126
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Medaka
Match: SRP54 (signal recognition particle 54 [Source:NCBI gene;Acc:101163779])

HSP 1 Score: 56.225 bits (134), Expect = 1.249e-7
Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K ++F+++++DTSGR +  + L   + ++ N  QPD +++V +A +G     Q     KA +D         +  +++TK D    K G A+S       PI+F+GTG+   D      +  +  L+
Sbjct:  180 KAENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQA----KAFKDKV------DVASVIVTKLDG-HAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
[Close]
BLAST of Signal recognition particle receptor subunit alpha vs. Planmine SMEST
Match: SMESG000012673.1 (SMESG000012673.1)

HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0
Identity = 522/525 (99.43%), Postives = 523/525 (99.62%), Query Frame = 3 
Query:   42 MIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKSLNKADEESLESKLAKIAKTRGXXXXXXXXXXXPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEGQLADIXXXXXXXXXXXXXXXYQKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLG 1616
            MIDLFTIFSKGGLVLVWYIQNGA+NVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNENIKHSKIEKSKITKKKVEINESIVVNEIVEVKDDKSLNKADEESLESKLAKIAKTRGKKMKNGISKKKPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEGQLADIEAESDFDSSEE EEDYQKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISL 
Sbjct:    1 MIDLFTIFSKGGLVLVWYIQNGADNVTKSVNSLIKSIVLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAIALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISFQESYKAAKTLKSMTNENIKHSKIEKSKITKKKVEINESIVVNEIVEVKDDKSLNKADEESLESKLAKIAKTRGKKMKNGISKKKPSPTDSPIIETISKKVKGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEELNKLKGRLEGQLADIEAESDFDSSEEDEEDYQKEIKTESKPQKKSNGMFSMLKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLVGKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVISFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQKLNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLA 525

HSP 2 Score: 270.011 bits (689), Expect = 6.513e-79
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 
Query: 2266 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 2652
            AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK
Sbjct:  525 AKEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLMK 653
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BLAST of Signal recognition particle receptor subunit alpha vs. Planmine SMEST
Match: SMESG000030377.1 (SMESG000030377.1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.525e-7
Identity = 31/127 (24.41%), Postives = 62/127 (48.82%), Query Frame = 1 
Query: 2269 KEKHFDVVMIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFNKALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTGQTYADLRQLSPEAVVKSLM 2649
            K  +F+++++DTSGR +  + L   + ++ N  +PD +++V +A +G     Q   F + +           +  +++TK D    K G A+S       PI+F+ TG+   D+     +  V+ L+
Sbjct:  180 KNDNFEIIIVDTSGRHKQEDSLFEEMLQVANTIKPDNIVYVMDASIGQACESQARAFKECVD----------VASVIITKLDG-HAKGGGALSAVAATQSPIIFICTGEHIEDIEPFKVQPFVQKLL 295
The following BLAST results are available for this feature:
BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SRPRA1.007e-6946.72SRP receptor subunit alpha [Source:HGNC Symbol;Acc... [more]
SRPRA2.395e-6956.48SRP receptor subunit alpha [Source:HGNC Symbol;Acc... [more]
SRP541.664e-726.77signal recognition particle 54 [Source:HGNC Symbol... [more]
SRP541.860e-725.20signal recognition particle 54 [Source:HGNC Symbol... [more]
SRP542.084e-726.77signal recognition particle 54 [Source:HGNC Symbol... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
F38A1.82.089e-7034.27pep chromosome:WBcel235:IV:1232872:1239852:-1 gene... [more]
F21D5.73.090e-926.19Signal recognition particle 54 kDa protein [Sourc... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Gtp-bp1.936e-6753.85gene:FBgn0010391 transcript:FBtr0073480[more]
Srp54k2.569e-829.92gene:FBgn0010747 transcript:FBtr0077169[more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
srpra5.712e-11342.70SRP receptor subunit alpha [Source:ZFIN;Acc:ZDB-GE... [more]
srp541.576e-726.77signal recognition particle 54 [Source:ZFIN;Acc:ZD... [more]
srp541.576e-726.77signal recognition particle 54 [Source:ZFIN;Acc:ZD... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SRPRA7.299e-7649.31SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
SRPRA1.200e-7563.54SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
SRPRA1.526e-7563.45SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
SRPRA3.934e-7563.54SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
SRPRA1.277e-7463.54SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Srpr4.069e-9938.19signal recognition particle receptor ('docking pro... [more]
Srpr1.219e-3675.00signal recognition particle receptor ('docking pro... [more]
Srp54c1.886e-726.77signal recognition particle 54C [Source:MGI Symbol... [more]
Srp54c1.886e-726.77signal recognition particle 54C [Source:MGI Symbol... [more]
Srp54b1.935e-726.77signal recognition particle 54B [Source:MGI Symbol... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9DBG7|SRPRA_MOUSE2.846e-9838.19Signal recognition particle receptor subunit alpha... [more]
sp|Q3MHE8|SRPRA_BOVIN4.794e-6956.99Signal recognition particle receptor subunit alpha... [more]
sp|P08240|SRPRA_HUMAN1.150e-6856.48Signal recognition particle receptor subunit alpha... [more]
sp|P06625|SRPRA_CANLF2.628e-6755.44Signal recognition particle receptor subunit alpha... [more]
sp|Q9U5L1|SRPRA_DROME1.941e-6653.85Signal recognition particle receptor subunit alpha... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5K3EM392.042e-13044.26Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A0R3UGB62.906e-12843.14Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A4S2MIF71.029e-12241.11Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A0R3WZL06.898e-12241.01SRP54 domain-containing protein OS=Hydatigena taen... [more]
A0A4S2MBW81.449e-12141.11SRP54 domain-containing protein OS=Opisthorchis fe... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
srpra1.516e-7459.30SRP receptor subunit alpha [Source:ZFIN;Acc:ZDB-GE... [more]
srp541.004e-726.77signal recognition particle 54 [Source:NCBI gene;A... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
srpra4.756e-6958.95SRP receptor subunit alpha [Source:ZFIN;Acc:ZDB-GE... [more]
srp545.355e-825.20signal recognition particle 54 [Source:ZFIN;Acc:ZD... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
SRP1014.133e-3543.89Signal recognition particle (SRP) receptor alpha s... [more]
SRP542.227e-1331.51Signal recognition particle (SRP) subunit (homolog... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO460435.002e-7145.24Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO495742.717e-1027.56Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
srpra2.553e-10340.67SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
srpra5.155e-7261.83SRP receptor subunit alpha [Source:NCBI gene;Acc:1... [more]
SRP541.249e-726.77signal recognition particle 54 [Source:NCBI gene;A... [more]
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BLAST of Signal recognition particle receptor subunit alpha vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000012673.16.513e-7999.43SMESG000012673.1[more]
SMESG000030377.12.525e-724.41SMESG000030377.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032897 ID=SMED30032897|Name=Signal recognition particle receptor subunit alpha|organism=Schmidtea mediterranea sexual|type=transcript|length=2777bp
GTCTTTTTATAATTTATTTAGTGGTGGCTCAAATTATTAAAATGATTGAT
TTGTTTACTATTTTTTCTAAAGGTGGATTAGTTTTGGTATGGTATATTCA
AAATGGTGCTGAAAATGTTACAAAGTCAGTTAATTCTTTAATTAAATCAA
TTGTTTTACAAGATAAAATTAGTAAAAATCCATATAATCATGAATTAGTG
TCATTACAGTATTATATGGATAATCAATTTGATCTAGTATATGTAGTGGC
ATATCAAAGTGTTTTAGAGTTGAGTTATACTGATAAATTTTTAACTGCTA
TAGCTTTGGAGTTTAGAGATAAGTACAAAAATGTGCTGGAATCTCAAAAT
TTTCTTTGGGATTTTTCTGATTTCATTTCAGTAGTTGATTCTACATTTTT
AACAGTAAAAAACAATTTTATGTCTAAGCCAAAAAAGGAAATGATATCTT
TTCAAGAATCATATAAAGCGGCTAAAACTTTAAAATCCATGACAAATGAA
AACATCAAACATTCCAAAATTGAAAAGTCTAAAATAACCAAGAAAAAAGT
GGAAATTAATGAGAGCATTGTTGTCAATGAAATTGTGGAAGTTAAAGATG
ACAAGAGTTTGAATAAAGCTGATGAAGAATCACTTGAAAGCAAATTAGCT
AAAATTGCTAAAACAAGAGGGAAAAAAATGAAGAATGGAATTTCCAAGAA
AAAGCCTAGTCCAACAGATTCCCCTATTATTGAAACTATTTCAAAAAAGG
TCAAAGGAAAAGAAAATAGAAAATGGACTAATGAAGCGACTGGTATTGAA
GCTGACGCTTTGAATTACAGTAAAAAACTAGAATTAAACGGCAATAAAGA
AGAACAATTATCTTTACAAGAAAAGCTTACTGTTGAAGATTTAGAAGAAC
TTAATAAATTAAAAGGCCGATTAGAAGGTCAATTGGCTGATATTGAAGCT
GAATCTGATTTTGATAGCAGTGAAGAGGGTGAAGAAGATTATCAAAAAGA
GATTAAAACGGAATCAAAGCCTCAAAAAAAGTCCAATGGCATGTTCAGTA
TGCTGAAATCATGGGTTGGAGTGCATGGGGGTGTGTTAACTGAAGAACAA
ATGTGCCCGGTATTGGAAAATTTGAAAACCCATTTAATAACCAAAAATGT
TGCCAGCGAAGTCGCACTTGAATTATGCAATGGAGTTGCTAAGAAACTGG
TTGGTAAAGAATTAGGAGTTCTTGAAAGAGTTTCAACAAAACTTCGAGAA
AGTTTGGAGGACTCGTGTCGAAAGTTATTGAATTGTGGCAGACGAATTGA
TGTGCTGCGAGATGTTATTGAAGCGAAACGACAAGGCAGGCCGTATGTCA
TTTCTTTCTGTGGTGTCAATGGTGTTGGGAAATCAACTAATCTGGCAAAA
ATAAGTTTCTGGCTAATTGAGCAAGGATTCCGAGTAATGATTGCTGCTTG
TGATACTTTCAGGTCGGGAGCTGTTGAACAGCTGCGTGTGCATGTTCAAA
AATTGAATTATATTCACCCACCGGAACAGCACCACGGACTACCAATGGTT
CAATTATATGAGAAAGGGTATGGCAAAGATGCCGCAGCCGTTGCGACATA
TGCTATCTCACTGGGTTGATAACAATTTCATTTATAATTACCATCCCTTT
TAGTTCACCTTGAAAATCGGGAATCAGCCACCTTAATTAATCACCTGACA
CGCCTGTGATTAATGCATACAAATCAGGTGCAAAATACATGCAAACCTTT
ATGGGATACACACATATACATATTTTATTAATATTTTACCTGTGCAATTG
AGATAAAATGCAATTCTATAATCTACATCTTATTGTAGGGACCTTTATGT
TGAGTAGAATGAACTAAAAATAGTTTTAAAAATTTGTAGTTTCCATATTT
AAAAGCCAAATTTTCGAGAATCAATAATTTAAAAGATAAAAATTCAAAAT
ACTTTGAAATTTATATAGCAAATCATTGGGAAAATAATTTTTTGAGTAAT
TTGATAAATTGGTTGTAAATATTGATTTGGATTTATAACGCGTCCCAAAA
TTTATAATATTCAACTGTGCCTTTAAAACAAACAAAGCATTGTAATATAA
ATTTTTTTAATAATTTTACGAAAACTTACAAAAATAAGATTAAATTCCTG
ACCAATCCGTTTTTGATTTGTTAATCAAAAAAATGTTTACTGATATCTTC
ATGGTGAGAAAAGGGAGGGATTATCATAAAATATTTGCAACTTTATGTGT
TAAATTCTGGTTTCAGCTAAAGAAAAACATTTCGATGTGGTAATGATAGA
CACTTCGGGTCGGATGCAGGATAATGAACCATTGATGCGATCTCTGGCCA
AGCTGATCAATGTTAATCAACCCGATCTCGTTTTATTCGTTGGTGAAGCT
CTTGTTGGACATGAAGCTGTAGATCAGTTGGTCAAGTTTAATAAGGCCCT
TCAGGATTATAGTGGCTCCGACCATCCACGAACCATTAATGGAATTGTTT
TGACTAAATTTGATACAATAGATGATAAAGTCGGCGCAGCGATATCTATG
ACCTATATTCTTGGCCAGCCAATCATGTTTGTCGGTACTGGGCAAACCTA
TGCTGATTTGCGGCAATTGTCACCGGAGGCTGTGGTCAAATCTTTAATGA
AATAGTTTCTGTCACTACATGACGTGTCTACCGATTTCTTTACTGTTCAG
ACCTTATTTACTGGCCATGTGTGATATTTTAATAAATGATTTCGAGTCTT
ATTAGTATTTTACTTTTTTTCTGTGTA
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protein sequence of SMED30032897-orf-1

>SMED30032897-orf-1 ID=SMED30032897-orf-1|Name=SMED30032897-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=539bp
LFIIYLVVAQIIKMIDLFTIFSKGGLVLVWYIQNGAENVTKSVNSLIKSI
VLQDKISKNPYNHELVSLQYYMDNQFDLVYVVAYQSVLELSYTDKFLTAI
ALEFRDKYKNVLESQNFLWDFSDFISVVDSTFLTVKNNFMSKPKKEMISF
QESYKAAKTLKSMTNENIKHSKIEKSKITKKKVEINESIVVNEIVEVKDD
KSLNKADEESLESKLAKIAKTRGKKMKNGISKKKPSPTDSPIIETISKKV
KGKENRKWTNEATGIEADALNYSKKLELNGNKEEQLSLQEKLTVEDLEEL
NKLKGRLEGQLADIEAESDFDSSEEGEEDYQKEIKTESKPQKKSNGMFSM
LKSWVGVHGGVLTEEQMCPVLENLKTHLITKNVASEVALELCNGVAKKLV
GKELGVLERVSTKLRESLEDSCRKLLNCGRRIDVLRDVIEAKRQGRPYVI
SFCGVNGVGKSTNLAKISFWLIEQGFRVMIAACDTFRSGAVEQLRVHVQK
LNYIHPPEQHHGLPMVQLYEKGYGKDAAAVATYAISLG*
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protein sequence of SMED30032897-orf-2

>SMED30032897-orf-2 ID=SMED30032897-orf-2|Name=SMED30032897-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=121bp
MIDTSGRMQDNEPLMRSLAKLINVNQPDLVLFVGEALVGHEAVDQLVKFN
KALQDYSGSDHPRTINGIVLTKFDTIDDKVGAAISMTYILGQPIMFVGTG
QTYADLRQLSPEAVVKSLMK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000099neuron
PLANA:0000484secretory system
PLANA:0002032epidermal cell
PLANA:0003117parapharyngeal cell
Vocabulary: INTERPRO
TermDefinition
IPR042101SRP54_N_sf
IPR036225SRP/SRP_N
IPR013822Signal_recog_particl_SRP54_hlx
IPR000897SRP54_GTPase_dom
IPR027417P-loop_NTPase
IPR007222Sig_recog_particle_rcpt_asu_N
IPR011012Longin-like_dom_sf
Vocabulary: biological process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
GO:0006886intracellular protein transport
GO:0006810transport
Vocabulary: molecular function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0005047signal recognition particle binding
Vocabulary: cellular component
TermDefinition
GO:0005785signal recognition particle receptor complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 431..537
e-value: 9.9E-34
score: 118.7
NoneNo IPR availableGENE3DG3DSA:3.30.450.60coord: 14..144
e-value: 2.1E-32
score: 113.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..343
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 14..536
NoneNo IPR availablePANTHERPTHR43134:SF1SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAcoord: 14..536
NoneNo IPR availableCDDcd17876SRalpha_Ccoord: 448..536
e-value: 1.31627E-45
score: 157.006
NoneNo IPR availableCDDcd14826SR_alpha_SRXcoord: 16..132
e-value: 3.63132E-34
score: 123.081
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 347..422
e-value: 0.0061
score: 22.1
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 359..410
e-value: 1.2E-5
score: 25.4
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 447..538
e-value: 1.8E-4
score: -76.0
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 448..506
e-value: 5.8E-16
score: 58.7
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3DG3DSA:1.20.120.140coord: 320..428
e-value: 2.2E-19
score: 71.5
IPR007222Signal recognition particle receptor, alpha subunit, N-terminalPFAMPF04086SRP-alpha_Ncoord: 42..319
e-value: 1.9E-34
score: 119.9
IPR011012Longin-like domain superfamilySUPERFAMILYSSF64356SNARE-likecoord: 14..124
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 429..502
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILYSSF47364Domain of the SRP/SRP receptor G-proteinscoord: 359..426