FMRFamide-activated amiloride-sensitive sodium channel
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032830 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. UniProt/SwissProt
Match: sp|Q25011|FANA_CORAP (FMRFamide-activated amiloride-sensitive sodium channel OS=Cornu aspersum OX=6535 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.290e-11 Identity = 105/515 (20.39%), Postives = 208/515 (40.39%), Query Frame = 3 Query: 288 LIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVK-DNYLKNFSLAKLLFTSDTITSYFETIGSFKAQMISHN-SSQIMYCLLLLKNSKIRVGHNNE-CGII-IKTVPNSQFLTC------QNIRIHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSLEVIKRLSCLDQLESLE-----PIKQIMSENK----------------CIRRCTYMTYECHLSTAHWALSNWKL----------------YWLMTMNDALNAL--ESNKHESINSA--KSIFQQYISQSETNLSKNVTNLIKTS--------DDLFLVINRQ 1655 +I + S S+ GL++I +++ K IW + +++ T+ L +YL++ + S M +P +++CN P S + + FN+ + ++ +++ F + F ++I +++E +G A+ +SHN +M+C N E C + T + + C Q +++H+ N ++L + DD T + + + G+R+++H P ++ G ++ PG + V A+ ++ P C + + + YT+ C +LI ++C C SS P ++ N TFC I D E+ + S D +S E P + E + C + C+ +Y +S ++W L ++L +++ T + L L S KH + N + I + S SE ++K ++LI+ + +DL +V RQ Sbjct: 42 IIAELGSESNAHGLAKIVTSRDTKRKVIWALLVIAGFTAATLQLSLLVRKYLQFQVVELSEIKDSMPVQYPSVSICNIEPI---------SLRTIRRMYFNNESQNLITWLRFIQKFRFEQDSFM-NSIRAFYENLGQ-DAKKLSHNLEDMLMHCRF-----------NRELCHVSNFSTFFDGNYFNCFTFNSGQRLQMHATGPENGLSLIFSVEKDDPLP--GTYGVYNFDNNILHSAGVRVVVHAPGSMPSPVDHGIDIPPGYSSSVGLKAILHTRLPYPYGNCTNDML------NGIKQYKYTFFACLQLCKQRLIIQRCGCKSSALP---EVPSYNATFCGVIK--DWQEINRNHSNEDHNQSEEDRAFIPTPYLACEEREQKNLNNDRTYELSCGCFQPCSETSYLKSVSLSYWPLEFYQLSAVERFFKQERQAGQNHFMKTAYEYLEKLAHPSQKHLARNDSHMDDILSKSYSLSEKEMAKEASDLIRQNMLRLNIYLEDLSVVEYRQ 521
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. TrEMBL
Match: A0A0R3SH18 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS4228 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 5.106e-51 Identity = 130/449 (28.95%), Postives = 228/449 (50.78%), Query Frame = 3 Query: 273 QKRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKN-FSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNEC----GIIIKTVPNSQFLTCQNIRIHSNYSTNAVA-LGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLP-FDIDENNVTFCSKI-NLSDSLEVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNA----LESNKHESINS--AKSIFQQYISQ 1577 Q+ S + FC +++RGL ++ F L+ IW IF++SM +L + L L ++L Y+ +++R + + FP +T+C+HYPF + A KLWQ +VLSP +FN +R + + L N + A+ + D+++ Y++ + +A+ + H+ + C+ + + I ++C G +K + Q+L C S+ + L LI+ M + E + D+F+QA GLR+++HEP T D G + EPGK ++ + VKW K+NTP PC+ + K + ++YT++ C K I +C CY P P F +E +C K+ D+ E ++RL+C++ ++ +KQ C +C Y TY+ +S W W+LYWL A+ E+N + SI ++Q+Y+S+ Sbjct: 16 QRLRSAFMLFCRCTTVRGLGKLWQGPKF-LRIIWAIFVVSMMSVLIISVLFLIIDFLNYDVGVHTRLLLDEPSPFPSLTICHHYPFSLQARKLWQEKKVLSPGQFNRYMRNLTWTSLLNNDVNAAEAITFYDSLSVYYQNLKPEEARALGHDHKIFLNCMRVASQTNII---EDDCRVLSGYKVKQFSHHQYLNCHTFEPESHLEALRTSFLSLIVSMGP-KESFGPDEQAFLPDIFEQAKGLRVVVHEPGTYPDLEKFGLHAEPGKLNEIGYEPVKWTKMNTPTRPCFH---TGPQYKDLDEVYNYTHEQCILLHQQKEIIDECGCYYVMNPRPSFPTEEK--PYCGKMWPRMDTEEFVRRLNCIEAKLNIS-VKQKYDGTVCQPQCEYYTYDSTISITKWRAHPWQLYWLRVQTQAVRLAKAFAENNTNASITESLGYKMWQRYLSE 453
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. TrEMBL
Match: A0A1I8G5D0 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Macrostomum lignano OX=282301 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.631e-50 Identity = 135/517 (26.11%), Postives = 260/517 (50.29%), Query Frame = 3 Query: 225 QIVKYQNNTTVHAKKLQKRESLIIK-FCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAE-VLSPLKFNSIIRQMVKDNYLK-NFSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQ-IMYCLLLLKNSKIRVGHNNECGIIIKTVPNSQFLTCQNIR-IHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKI-NTPKEPC---WSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSLEVIKRLSCLDQL-ESLEPIKQ---------IMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALE--SNKHESINSAKSIFQQYISQSETNL--------SKNVTNLIKTSDDL--FLVINRQSFMTLEKVE 1682 ++ + ++++ AK + + + I + FCS+SS+RG+ +I L+ +WL+F+L+M +LL S + Y EY+ + + + FP IT+C+HYPF A ++WQ + L+P FN +RQ+ + N LA L D + +Y++ + + H+ + +++C++ + N + VG +EC + + V + ++ C ++ ++ S A+ LI+++ S+ + E V DVF QA+GLR+LLHE + G ++EPGK ++ F V W + ++P + C W I + N + Y+Y CK + KL +C C S++P P + N + +C S+ + RL CL+++ E + Q + +++C +RCT +Y+ LS W S+++L+W++ +D+ L +N+ E + ++I + + T L + L +++D ++V+ R+SF TL++ E Sbjct: 1300 ELTRLNADSSLPAKPVPQPSANIRQLFCSSSSLRGVPKICRADTTFLRILWLVFVLAMFILLVYSSTRVLMNYREYDVSVQTSVIGNDPSDFPAITICSHYPFSPRAARMWQQCDGQLAPATFNRRLRQLTRQLLFSGNLRLANTLLFYDKVNTYYQNLDPNVTVSMGHSVDEFLLHCMIAIGNY-VMVGKASECQLTFQLVSHPKYFNCYTVKPTQADKSQAMSAVYLIVNLGSNSRQ-HPWEQAFVMDVFDQAYGLRLLLHEANLYPGIENAGVHIEPGKMVEIAFDTVLWKETQDSPMDRCHDGWRPAI-----EDLQNRYRYSYQACKEAHMNKLFIAKCQCLLSRFPRPAGLPSNQIPYCGDFRTSNISIIESRLRCLEEIGEHQSKMPQPAAAAAAAAVADDSQCRKRCTRYSYDQELSITRWRASSYQLHWMLHQSDSWKRLREVNNESEKRHLLRNILDYLGADNLTRLPVSYQQQERQQQATLTDSAEDTYAYVVVRRKSFDTLKREE 1809
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. TrEMBL
Match: A0A068XZW8 (FMRFamide activated amiloride sensitive sodium OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000526700 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.316e-50 Identity = 125/433 (28.87%), Postives = 218/433 (50.35%), Query Frame = 3 Query: 285 SLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKN-FSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNEC----GIIIKTVPNSQFLTCQNIRIHSNYSTNAVA-LGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKI--NLSDSLEVIKRLSCL-DQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESNKHESINSAKSI 1556 + + FC +++RGL ++ F L+ IW IF++SM +L + + L ++L Y+ +++R + + FP +T+C+HYPF M A KLWQ +VLSP +FN +R + N L N S A+ + D+++ Y++ + +A+ + H+ + C+ + + I ++C G +++ + Q+L C + L L++ M + + E + D+F+QA GLR+++HEP T D G + EPGK ++ + V+W K+NTP PC+ + K ++YT++ C K I + C CY P P + N +C ++ NL D + + RL+CL D+L+ +K+ C+ RC Y TY+ +S W W+LYWL A+ ++ NS K I Sbjct: 20 TAFVLFCRCTTVRGLGKLWQGPTF-LRIIWAIFVVSMMCVLLISVVLLILDFLAYDVGVHTRLLLDDPSPFPALTVCHHYPFSMQARKLWQEKKVLSPGQFNRYMRNLTWTNLLNNDVSAAEAITFYDSLSVYYQNLSPEEAKALGHDHRIFLNCMRVSSQTSI---FEDDCRLLKGYLVRQFSHHQYLNCHTFEPADQKEALETSFLSLMVSMGP-KESSDPDEQAFLPDIFEQAKGLRVVVHEPGTYPDLEKFGLHAEPGKLNEIGYEPVRWTKMNTPTRPCFHK---AEKYHDLEGVYNYTHEQCLLLYQQKEIIEDCGCYYVMNPRP-SLPTNEKPYCGRMWPNL-DIEKFVNRLACLRDKLDIA--VKRKYDGRVCLPRCEYYTYDSAISITKWRAHMWQLYWLRVQTQAVRLVQEFTQS--NSGKDI 438
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. TrEMBL
Match: U6JC63 (FMRFamide activated amiloride sensitive sodium OS=Echinococcus granulosus OX=6210 GN=EGR_03902 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.184e-49 Identity = 125/433 (28.87%), Postives = 218/433 (50.35%), Query Frame = 3 Query: 285 SLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKN-FSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNEC----GIIIKTVPNSQFLTCQNIRIHSNYSTNAVA-LGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKI--NLSDSLEVIKRLSCL-DQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESNKHESINSAKSI 1556 + + FC +++RGL ++ F L+ IW IF++SM +L + + L ++L Y+ +++R + + FP +T+C+HYPF M A KLWQ +VLSP +FN +R + N L N S A+ + D+++ Y++ + +A+ + H+ + C+ + + I ++C G +++ + Q+L C + L L++ M + + E + D+F+QA GLR+++HEP T D G + EPGK ++ + V+W K+NTP PC+ + K ++YT++ C K I + C CY P P + N +C ++ NL D + + RL+CL D+L+ +K+ C+ RC Y TY+ +S W W+LYWL A+ ++ NS K I Sbjct: 20 TAFVLFCRCTTVRGLGKLWQGPTF-LRIIWAIFVVSMMCVLLISVVLLILDFLAYDVGVHTRLLLDDPSPFPALTVCHHYPFSMRARKLWQEKKVLSPGQFNRYMRNLTWTNLLNNDVSAAEAITFYDSLSVYYQNLSPEEAKALGHDHRIFLNCMRVSSQTSI---FEDDCRLLKGYLVRQFSHHQYLNCHTFEPADQKEALETSFLSLMVSMGP-KESSDPDEQAFLPDIFEQAKGLRVVVHEPGTYPDLEKFGLHAEPGKLNEIGYEPVRWTKMNTPTRPCFYK---AEKYHDLEGVYNYTHEQCLLLYQQKEIIEDCGCYYVMNPRP-SLPTNEKPYCGRMWPNL-DIEKFVNRLACLRDKLDIA--VKRKYDGRVCLPRCEYYTYDSAISITKWRAHMWQLYWLRVQTQAVRLVQEFTQS--NSGKDI 438
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. TrEMBL
Match: A0A0R3WN07 (Uncharacterized protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS2132 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.970e-49 Identity = 130/452 (28.76%), Postives = 227/452 (50.22%), Query Frame = 3 Query: 285 SLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKN-FSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNEC----GIIIKTVPNSQFLTCQNIR-IHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKI--NLSDSLEVIKRLSCL-DQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNA----LESNKHESINS--AKSIFQQYISQSETNLS 1595 + + FC +++RGL ++ F L+ IW IF++SM +L + + L ++L Y+ +++R + + FP +T+C+HYPF M A KLWQ +VLSP +FN +R + N L N S A+ + D+++ Y++ + +A+ + H+ + C+ + + I ++C G ++ + Q+L C + + L LI+ M + + E + D+F+QA GLR+++HEP T D G + EPGK ++ + V+W K+NTP PC+ + K + ++YT++ C K I + C CY P P N +C ++ NL D + + RL CL D+L +K+ + C+ RC Y TY+ +S W W+LYWL A+ ++ N +I ++++Y+ SE NLS Sbjct: 20 TAFVLFCRCTTVRGLGKLWQGPTF-LRIIWAIFVVSMMCVLLISVVLLILDFLAYDVGVHTRLLLDDPSPFPALTVCHHYPFSMRARKLWQERKVLSPGRFNRYMRNLTWTNLLNNDVSAAEAITFYDSLSVYYQNLSPEEAKSLGHDHRIFLNCMRVSSQTSI---FEDDCRLLKGYRVRQFSHHQYLNCHTFEPVDQKEALETSFLSLIVSMGP-KESSDPDEQAFLPDIFEQAKGLRVVVHEPGTYPDLEKFGLHAEPGKLNEIGYQPVRWTKMNTPTRPCFHE---AEKYYDLDGIYNYTHEQCLLLYQQKEIIEDCGCYYVMNPRP-SFPTNEKPYCGRMWPNL-DIEKFVNRLECLRDKLNIA--VKRKYDGSVCLPRCEYYTYDSAISITKWRAQMWQLYWLRVQTQAVRLTQEFMQHNSSRNITESLGYRMWKRYL--SERNLS 457
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Planmine SMEST
Match: SMESG000004049.1 (SMESG000004049.1) HSP 1 Score: 1033.09 bits (2670), Expect = 0.000e+0 Identity = 558/560 (99.64%), Postives = 559/560 (99.82%), Query Frame = 3 Query: 162 MTKPEKIYVRNGIIAFHTKGKQIVKYQNNTTVHAKKLQKRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKNFSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNECGIIIKTVPNSQFLTCQNIRIHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSLEVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESNKHESINSAKSIFQQYISQSETNLSKNVTNLIKTSDDLFLVINRQSFMTLEKVEVFXXXXXXXXXXXXXXXXXXXXXXFTTIFEIAEFLITFFQGIQFRNIKNLRRS 1841 MTKPEKIYVRNGIIAFHTKGKQIVKYQNNTTVHAKKLQKRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFLLSMSVLLTVGSLSLTFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKNFSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGH+NECGIIIKTVPNSQFLTCQNIRIHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIKSKDKKFNNNFSYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSLEVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESN HESINSAKSIFQQYISQSETNLSKNVTNLIKTSDDLFLVINRQSFMTLEKVEVFSLTRSALLSRLGGLSSITLGITFTTIFEIAEFLITFFQGIQFRNIKNLRRS Sbjct: 1 MTKPEKIYVRNGIIAFHTKGKQIVKYQNNTTVHAKKLQKRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFLLSMSVLLTVGSLSLTFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKNFSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHHNECGIIIKTVPNSQFLTCQNIRIHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIKSKDKKFNNNFSYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSLEVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESNNHESINSAKSIFQQYISQSETNLSKNVTNLIKTSDDLFLVINRQSFMTLEKVEVFSLTRSALLSRLGGLSSITLGITFTTIFEIAEFLITFFQGIQFRNIKNLRRS 560
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Planmine SMEST
Match: SMESG000060702.1 (SMESG000060702.1) HSP 1 Score: 202.601 bits (514), Expect = 1.076e-56 Identity = 145/488 (29.71%), Postives = 252/488 (51.64%), Query Frame = 3 Query: 264 KKLQKRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKNFSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNEC----GIIIKTVPNSQFLTCQNIRIHS-NYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCW----SQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSL-EVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESN-KHESINSAKSIFQQYISQ---SETNLSKNVTNLIKTSDDL-FLVINRQSFMTLEKVE 1682 KKL K ES++ FC +IRG++++++ +F L+ +W +F+L M+++L + L +Y +Y+ ++ R+ + T FP IT+C+H+PF DA KLW S +VLSP FN +RQ ++ A + D+I Y++ + ++ + H + ++YCL + + ++ N+C +IK + + Q C + + S + LI+ + E + DVF+QA GLR ++HEP T+ D +G +VEPGK ++ F V +K++TPK PC S ++I ++ ++YT+ N E LI K C C YP P V +C K+ L E R++C+ + ++I E KC RC+Y TYE +S W W+L+WL ++A AL +N ES +AK+ ++ Y+ + S N++ + +L DD ++V+ ++S + E+ E Sbjct: 34 KKLVKDESILELFCRCMTIRGVNKMTSASSF-LRYLWSVFVLLMTIILVGATCLLILDYFKYDVTLHQRDLQKNST-FPAITICHHHPFSKDAYKLWDSKKVLSPSLFNLYMRQNALHYLNQDDKFANNFYYFDSIDIYYQNLLYNESIALGHKYTIVLYCL---RRNDYQIDFENDCQQFDSYVIKRLSHPQHFNCYTFEPRNISVSVSTRFFSLIVSLGRPEPDYANHEQAFLIDVFEQAKGLRAVVHEPGTIPDIEREGLHVEPGKLNEINFQPVLNLKLDTPKRPCIPDNESSKLI-----DLDSKYNYTFYEYINLEKQYLIVKHCKCMYILYPRPL-YPTKEVPYCGKLWPKIDLDEFTTRINCVSNYLKMSLTEEI--EKKCRPRCSYYTYEATVSITKWRAKQWQLHWLSLQSNAQKALNANISAESYQNAKNSWKSYLERRDLSNVNIADSRKSLNLDGDDFAYVVLKKKSSILKERSE 508
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Planmine SMEST
Match: SMESG000039581.1 (SMESG000039581.1) HSP 1 Score: 194.126 bits (492), Expect = 3.212e-53 Identity = 157/531 (29.57%), Postives = 267/531 (50.28%), Query Frame = 3 Query: 276 KRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKNFSL-AKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNECGII----IKTVPNSQFLTCQNIRIHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNC---YSSKYPLPFDIDENNVTFCSK-INLSDSLEVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESNKHESINSAKSI-FQQYISQSETNLSKNVTNLIKTSDD-----------LFLVINRQSFMTLEKVEVFXXXXXXXXXXXXXXXXXXXXXXFTTIFEIAEFLITFFQG 1805 K +++ I FCS +S++G+++I+ L+ +WL F+++MS +L V S L +++ Y+ IN T FP IT+C+H+PF M+A K W+ ++LSP FN +R + N + N + A+ + D I+ Y++ IG + +I H + C+LL N + + C + +K + + C + T LG+I+ M + T E + D F+QA GL++++HEP D G +VEPGK ++ + V+W NTP +PC++ +I K + ++YT D C + E K I +C+C Y+ + +P + +C + SD E+ R+ CL ++ K+ + KC +RCTYMTYE +S W + W L+W+ L++N IN+ +S F+Q++ N TNL +D ++V+ R+S ++ K E ++ L+SR+GGL S T+GIT + EI EFL ++Q Sbjct: 74 KTKNVFILFCSTTSMKGMNKITRGPK-PLRFLWLSFVMTMSTVLIVSSCLLVRDFMLYDVNINIEVRLASQTPFPSITICHHHPFSMEAYKYWRENKILSPSTFNRKMRNLTHSNLMGNRVMEAEGISNYDVISVYYQNIGYNDSMLIGHQKDIFLSCMLLRNNM---ISYEENCSKLEEYEVKMFSHHEHFNCYTFEAKVDKIT---TLGIIVSMGPPPDYSAT-EQAFIVDTFRQAQGLKVIVHEPGVPPDIDNGGVHVEPGKLNEISYRPVEWKLENTPTKPCFN-DIKKERYNDLERFYNYTQDMCLSSEEQKRIIDECHCIFIYNPRLQIP----TKKLPYCGNFLEDSDLSELNHRIECLTNIQEDVNFKKKLESEKCFQRCTYMTYETSISITKWRATEWHLHWIRLQLLTFRQLKNNPQ--INATESTYFKQWLKYW------NATNLTVIDEDRKERFLANDNFAYIVLRRESDNSVRKYERLVISPYVLVSRIGGLCSFTVGITASFFVEILEFLYLYYQS 583
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Planmine SMEST
Match: SMESG000043119.1 (SMESG000043119.1) HSP 1 Score: 184.882 bits (468), Expect = 4.434e-50 Identity = 140/500 (28.00%), Postives = 251/500 (50.20%), Query Frame = 3 Query: 246 NTTVHAKKLQKR---ESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIRQMVKDNYLKN-FSLAKLLFTSDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNECGII----IKTVPNSQFLTCQNIR-IHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKI----NLSDSLEVIKRLSCLDQLESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWL----MTMNDALNALESNKHESINSAKSIFQQYISQSETNLSKNVTN----LIKTSDDLFLVINRQSFMTLEKVE 1682 N+ H K ++K ++ I FCS SIRG+++I L+ +WL F+L MS +L S L +++ Y+ IN++ + +T FP +T+C+H+PF ++W+S + +SP FN +R + D L N A+ + D I+ Y++ + +A + HNSS + C+ LL+N +I N C + IK + + + C + S+N LG+I+ + KH + +E + D F+QA GL++++HE TL D G +VEPGK ++ + +W NTP +PC + + + N ++YT C + I QC+C P P +E ++ +C I NLS+ +K CL + + + +Q + KC RC YMT++ +S W + W LYWL ++ + L++N + ++ +++ I ++ +L K L+K + ++V+ R+S +++K E Sbjct: 43 NSISHGKIIKKDFQPKNFFILFCSTISIRGINKIIKGPR-PLRLLWLCFVLIMSAILITSSCLLVRDFMLYDVNINTKLEIDSMTPFPALTVCHHHPFSHRGYRMWKSGKAMSPSYFNRKMRNLTLDQLLLNDVESAETISYYDGISIYYQNLPYEQAIQMGHNSSIFLTCMYLLEN-QIYFAEN--CTKLEFYRIKLLSHHEHFNCYTFEPTQPHVSSNLDMLGIIVSLGPEPKHFD-MEQSFIIDTFRQAQGLKVIVHESGTLPDIDEAGLHVEPGKMNEIIYRPNQWQLTNTPAKPCIN-DTSRIAYVDLANTYNYTKHLCLKYAEQEDIMNQCHCMFIYNPRPMMPNE-SMPYCGSILKDFNLSNIYSYVK---CLSDVLNQKSKRQQWEKEKCFHRCNYMTFDSTISITKWRATEWHLYWLRQQITSLGEMKQFLKANPNRNVTESQAFKTWLIYGNKKDLRKTGLKANEFLLKDDNFAYIVLRRESKDSVKKYE 532
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Planmine SMEST
Match: SMESG000062815.1 (SMESG000062815.1) HSP 1 Score: 180.644 bits (457), Expect = 1.531e-48 Identity = 131/509 (25.74%), Postives = 248/509 (48.72%), Query Frame = 3 Query: 246 NTTVHAKKLQKRESLIIKFCSNSSIRGLSRISANQNFSLKSIWLIFXXXXXXXXXXXXXXXXFEYLEYNTLINSRENHEMITIFPGITLCNHYPFHMDANKLWQSAEVLSPLKFNSIIR--------QMVKDNYLK---NFSLAKLLFT-SDTITSYFETIGSFKAQMISHNSSQIMYCLLLLKNSKIRVGHNNECGIIIKTVPNSQFLTCQNIRIHSNYSTNAVALGLIIHMDDLSKHLNTLELGLVQDVFKQAHGLRILLHEPDTLADFSLDGFNVEPGKFTDVKFSAVKWIKINTPKEPCWSQEIIXXXXXXXXXXXXYTYDTCKNEEIGKLIYKQCNCYSSKYPLPFDIDENNVTFCSKINLSDSLEVIKRLSCLDQL--ESLEPIKQIMSENKCIRRCTYMTYECHLSTAHWALSNWKLYWLMTMNDALNALESNKHESIN--------SAKSIFQQYISQSETNLS-KNVTNLIKTSDDL-------FLVINRQSFMTLEKVE 1682 N+ + KK ++ +I KF +N+SIRG SRI ++ L+++W++F++S L V + +Y +Y+ I + + T FP +T CNH PF A +LW+ ++V+SP +FN + R MV+ +F+ L T +D ++ Y++ + + + + HN S I C+ H + +I+K + + + C + H Y++ LGLII + + G + D+F+QA+GLR+++HEP++ + +G +EPG+ ++ + IK++T ++PC ++ + +N F Y D C N E+ + I +C C YP + + +C + +++ R +C+ ++ E+ + + ++ KCI C+ + Y S W ++W+LYWL + DA + +IN + + + Q S+ ET + KN++ I S+ L F+V+ R++ T K E Sbjct: 2 NSVIGNKKNKQCFEVIRKFFANTSIRGFSRIVKSETTFLRTLWILFVVSTITFLIVSIFKVVIDYRQYSVNIQTYIQIDNATPFPALTFCNHQPFSERAYQLWEESKVMSPTQFNELFRSEALKQFKDMVRTKMTPKDSDFNHPLFLTTINDRLSVYYQNLPTTVSSELGHNISIIKNCVWSYGQHMAFDNHCQDDMLIVKNISHPSYFNCFTVEPHPKYASIFSRLGLIIWLGPDEQTNIKHRQGFLFDIFEQAYGLRVIIHEPNSYPNIESEGVQIEPGRLNELNYQPELNIKVDTERKPCINEP--DRIYRDLDNVFKYDIDLCFNMELQQRIITECKCIYGYYPR-YLHPSKELPYCGYLEPEKYHDLLFRKNCITKIFNEAPDIKSNLKADKKCIHSCSSIEYTTTTSVTKWRPTDWQLYWLKEVLDAWAQYYNLMARNINIPSNNMTTTDRIMLQNLTSRIETFFTRKNLSEFIPESEKLLFNERYTFVVVKRKANNTFIKEE 507 The following BLAST results are available for this feature:
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 1
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of FMRFamide-activated amiloride-sensitive sodium channel vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032830 ID=SMED30032830|Name=FMRFamide-activated amiloride-sensitive sodium channel|organism=Schmidtea mediterranea sexual|type=transcript|length=1939bpback to top protein sequence of SMED30032830-orf-1 >SMED30032830-orf-1 ID=SMED30032830-orf-1|Name=SMED30032830-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=561bp MTKPEKIYVRNGIIAFHTKGKQIVKYQNNTTVHAKKLQKRESLIIKFCSNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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