Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like

Overview
NameLipopolysaccharide-induced tumor necrosis factor-alpha factor-like
Smed IDSMED30032785
Length (bp)587
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like (SMED30032785) t-SNE clustered cells

Violin plots show distribution of expression levels for Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like (SMED30032785) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like (SMED30032785) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like (SMED30032785) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30032785

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
epidermisSMED30032785SMESG000064937.1 dd_Smed_v4_10754_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Category 4 cellSMED30032785SMESG000064937.1 dd_Smed_v4_10754_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 69.707 bits (169), Expect = 9.727e-15
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:  270 TTQIILEPHA-EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            T Q +   H     + PIQM CPSC  ++V+++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   75 TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 69.707 bits (169), Expect = 9.727e-15
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:  270 TTQIILEPHA-EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            T Q +   H     + PIQM CPSC  ++V+++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   75 TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 69.707 bits (169), Expect = 9.727e-15
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:  270 TTQIILEPHA-EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            T Q +   H     + PIQM CPSC  ++V+++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   75 TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 69.707 bits (169), Expect = 9.727e-15
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:  270 TTQIILEPHA-EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            T Q +   H     + PIQM CPSC  ++V+++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   75 TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 69.707 bits (169), Expect = 9.727e-15
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:  270 TTQIILEPHA-EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            T Q +   H     + PIQM CPSC  ++V+++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   75 TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: F36G3.3 (pep chromosome:WBcel235:X:9798839:9801038:1 gene:WBGene00009484.1 transcript:F36G3.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F36G3.3)

HSP 1 Score: 66.6254 bits (161), Expect = 4.748e-14
Identity = 48/143 (33.57%), Postives = 70/143 (48.95%), Query Frame = 3 
Query:  147 LMKPSAPPDYDTVVK----ESVTSPPPYSIH------------TPMSSSVMNGHNYGTTQII-LEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLL-SGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++ P+  PDY          S  + PPY  H            +P+ +++ +G    +T II LEPHA       ++ CP C+  +VTR +   G L+W+  + LF F C   C  L  C+  CKD IH CPNC A+IG + R
Sbjct:   12 IVPPAYNPDYAPTQPVYHPSSHVTAPPYHYHDNGGFENVVDVNSPVYTTLASGPMPTSTIIIRLEPHAT------KLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWC-CCFLPFCLRSCKDIIHTCPNCRAMIGVHRR 147
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y37D8A.8 (pep chromosome:WBcel235:III:12864948:12867591:1 gene:WBGene00012549.1 transcript:Y37D8A.8.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y37D8A.8)

HSP 1 Score: 55.0694 bits (131), Expect = 6.507e-10
Identity = 28/69 (40.58%), Postives = 35/69 (50.72%), Query Frame = 3 
Query:  315 PIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P Q  CP C+  VVT VE E G  +WL+  L  F       +  LC  D +D IH CPNC  ++ R  R
Sbjct:   63 PYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFF--LIYILCCIDIRDAIHHCPNCGMVLSRKKR 129
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: nmr-1 (NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1 [Source:UniProtKB/TrEMBL;Acc:G5EGQ9])

HSP 1 Score: 56.9954 bits (136), Expect = 1.633e-9
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 3 
Query:  291 PHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P  + ++ P+ + C  C+N+V + V  ETG  ++L   LF    L PC+ L   +    D +H CP C  I+GR+ R
Sbjct:  941 PDLDFKDKPLVLFCSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: nmr-1 (NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1 [Source:UniProtKB/TrEMBL;Acc:G5EGQ9])

HSP 1 Score: 56.9954 bits (136), Expect = 1.633e-9
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 3 
Query:  291 PHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P  + ++ P+ + C  C+N+V + V  ETG  ++L   LF    L PC+ L   +    D +H CP C  I+GR+ R
Sbjct:  941 PDLDFKDKPLVLFCSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.18 (pep chromosome:WBcel235:I:13512384:13514320:-1 gene:WBGene00013604.1 transcript:Y87G2A.18.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.18)

HSP 1 Score: 51.6026 bits (122), Expect = 1.207e-8
Identity = 26/80 (32.50%), Postives = 37/80 (46.25%), Query Frame = 3 
Query:  315 PIQMICPSCQNLVVTRVEEETGALSWLLSGLFCF-----------FCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PI+M CP CQN +V+ +E   G L W++  +  F           FC +P       +    D  H CP C   +GR+NR
Sbjct:   43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVP-----FFLDQLLDVNHSCPACKKFLGRFNR 117
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073031)

HSP 1 Score: 63.1586 bits (152), Expect = 8.612e-13
Identity = 42/127 (33.07%), Postives = 58/127 (45.67%), Query Frame = 3 
Query:  144 FLMKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++  PSAPP Y    +E+V    P   +TP+ +             I+     I      MICPSC   + T    E G +++L   L   F C + C ++  CI DC D  H CPNC A +GRY R
Sbjct:   13 YVPPPSAPPSY----QEAVGGVKPVGPYTPVVAPATT-----ANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073030)

HSP 1 Score: 63.1586 bits (152), Expect = 8.612e-13
Identity = 42/127 (33.07%), Postives = 58/127 (45.67%), Query Frame = 3 
Query:  144 FLMKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++  PSAPP Y    +E+V    P   +TP+ +             I+     I      MICPSC   + T    E G +++L   L   F C + C ++  CI DC D  H CPNC A +GRY R
Sbjct:   13 YVPPPSAPPSY----QEAVGGVKPVGPYTPVVAPATT-----ANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0344220)

HSP 1 Score: 63.1586 bits (152), Expect = 8.612e-13
Identity = 42/127 (33.07%), Postives = 58/127 (45.67%), Query Frame = 3 
Query:  144 FLMKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++  PSAPP Y    +E+V    P   +TP+ +             I+     I      MICPSC   + T    E G +++L   L   F C + C ++  CI DC D  H CPNC A +GRY R
Sbjct:   13 YVPPPSAPPSY----QEAVGGVKPVGPYTPVVAPATT-----ANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073032)

HSP 1 Score: 63.1586 bits (152), Expect = 8.612e-13
Identity = 42/127 (33.07%), Postives = 58/127 (45.67%), Query Frame = 3 
Query:  144 FLMKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++  PSAPP Y    +E+V    P   +TP+ +             I+     I      MICPSC   + T    E G +++L   L   F C + C ++  CI DC D  H CPNC A +GRY R
Sbjct:   13 YVPPPSAPPSY----QEAVGGVKPVGPYTPVVAPATT-----ANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG30269 (gene:FBgn0050269 transcript:FBtr0071867)

HSP 1 Score: 62.7734 bits (151), Expect = 1.657e-12
Identity = 42/126 (33.33%), Postives = 59/126 (46.83%), Query Frame = 3 
Query:  156 PSAPPDYD--TVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQ--IILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P APP YD  T      T P P     P S+S        TTQ  +++ P +     P+ + CP C N   TRV  +  + + L++ + C F L  C  L  CI  C +T H+C  CD  +G Y+R
Sbjct:   30 PPAPPSYDQATTTPAETTGPAP----VPASTS--------TTQHTVVVVPGSPYGPEPMDVQCPYCHNYARTRVSFKPNSRTHLIALILCLFQLYCCVCLPYCISSCMNTNHYCGMCDRYLGTYDR 143
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: litaf (lipopolysaccharide-induced TNF factor [Source:NCBI gene;Acc:431731])

HSP 1 Score: 76.2554 bits (186), Expect = 2.176e-17
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  150 MKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWL-LSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            MK S PP Y T  +E     PP +   P++S V+         + ++P       P+Q  CP C   V+TR+E  +G L WL  +GL  F C+  C ++  CI D KD  H CPNC +++G + R
Sbjct:   45 MKASGPPPYPT--QEYNQMYPPTAQGQPVTSPVV-----AVQTVYVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPLVWLSCAGLAVFGCIYGCCLIPFCIEDLKDVTHHCPNCSSVLGVHKR 162
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:ch211-202h22.8 (si:ch211-202h22.8 [Source:ZFIN;Acc:ZDB-GENE-090313-78])

HSP 1 Score: 64.6994 bits (156), Expect = 3.089e-13
Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 3 
Query:  273 TQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            TQ+++ P   + + P Q  CP CQ  ++T      G L+WL+ G      + PC ++  C+  CKD  H CPNC  ++  Y R
Sbjct:   55 TQVVMMP-PSLSDVPGQTKCPHCQQQIITETRYVNGLLTWLICGGLGILLIWPCCLIPFCVSACKDVEHRCPNCKHVVFLYKR 136
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:ch211-202h22.8 (si:ch211-202h22.8 [Source:ZFIN;Acc:ZDB-GENE-090313-78])

HSP 1 Score: 64.6994 bits (156), Expect = 3.089e-13
Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 3 
Query:  273 TQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            TQ+++ P   + + P Q  CP CQ  ++T      G L+WL+ G      + PC ++  C+  CKD  H CPNC  ++  Y R
Sbjct:   55 TQVVMMP-PSLSDVPGQTKCPHCQQQIITETRYVNGLLTWLICGGLGILLIWPCCLIPFCVSACKDVEHRCPNCKHVVFLYKR 136
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:ch211-202h22.7 (si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77])

HSP 1 Score: 61.2326 bits (147), Expect = 8.214e-12
Identity = 37/112 (33.04%), Postives = 53/112 (47.32%), Query Frame = 3 
Query:  213 PYSIHTP----MSSSVMNGHNYGT-----TQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P +++ P    MSSSV+            T ++L P + + E P QM CP CQ  VVT      G L W +      F + PC ++  C+  CKD  H CP C +++  Y R
Sbjct:   35 PMAVYNPQPAVMSSSVIQTVQTAAPPPAQTTVVLMP-SRLGECPGQMRCPHCQQQVVTETTYVNGLLVWGICIGLGIFGIWPCCLIPFCVDSCKDVQHRCPGCKSLVYVYKR 145
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:ch211-202h22.7 (si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77])

HSP 1 Score: 60.4622 bits (145), Expect = 1.104e-11
Identity = 34/113 (30.09%), Postives = 53/113 (46.90%), Query Frame = 3 
Query:  183 VVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +V+ ++T   P   + P +  +        T ++L P + + E P QM CP CQ  VVT      G L W +      F + PC ++  C+  CKD  H CP C +++  Y R
Sbjct:   15 LVQNNITYQQPPVTYQPQAGQLNKALKL--TTVVLMP-SRLGECPGQMRCPHCQQQVVTETTYVNGLLVWGICIGLGIFGIWPCCLIPFCVDSCKDVQHRCPGCKSLVYVYKR 124
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: aff2 (AF4/FMR2 family member 2 [Source:Xenbase;Acc:XB-GENE-952102])

HSP 1 Score: 82.4185 bits (202), Expect = 2.833e-19
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYS-IHTPMSSSVMNGHNYGTTQIILEPHAEIR-----------EYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+    E+    PPY  +H  M +  M+   Y    + ++P   ++           + P+QM C SC +++ TR+E  +GAL+WL  G  C   C+  C ++  CI   KD  H+CPNC A++G Y R
Sbjct:   57 PSAPPSYE----EATFHHPPYPPLHQGMDAKNMSNPPYIVQPVPMQPPVTVQTVYVQQAMTLYDRPVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSYKR 187
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: ENSXETT00000031517.1 (LITAF domain containing [Source:NCBI gene;Acc:100498168])

HSP 1 Score: 67.0106 bits (162), Expect = 8.199e-14
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 3 
Query:  297 AEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSG-LFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +  ++ P    CPSC+  ++T +    G L+WLL G LF F C + C ++  C+  CKD  H+CPNC+  + +Y R
Sbjct:   65 STFQDTPASTTCPSCRQNIITNIHYNIGLLTWLLFGILFIFGCWLGCCLIPFCVDSCKDVDHYCPNCNHHLYKYKR 140
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 67.0106 bits (162), Expect = 1.326e-13
Identity = 27/97 (27.84%), Postives = 52/97 (53.61%), Query Frame = 3 
Query:  234 MSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
             S+ V+N     +  +     +  ++ P+   CP+C   ++TR++   G  SW+L  +F FF C + C ++   +  CKD  H+CP+C+ ++ +Y R
Sbjct:   75 QSAPVVNAQPLQSAPVHTIVGSSFQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKR 171
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 67.0106 bits (162), Expect = 1.466e-13
Identity = 27/97 (27.84%), Postives = 52/97 (53.61%), Query Frame = 3 
Query:  234 MSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
             S+ V+N     +  +     +  ++ P+   CP+C   ++TR++   G  SW+L  +F FF C + C ++   +  CKD  H+CP+C+ ++ +Y R
Sbjct:   86 QSAPVVNAQPLQSAPVHTIVGSSFQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKR 182
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 67.0106 bits (162), Expect = 1.518e-13
Identity = 24/76 (31.58%), Postives = 45/76 (59.21%), Query Frame = 3 
Query:  297 AEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +  ++ P+   CP+C   ++TR++   G  SW+L  +F FF C + C ++   +  CKD  H+CP+C+ ++ +Y R
Sbjct:   96 SSFQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKR 171
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Litaf (LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512])

HSP 1 Score: 73.1738 bits (178), Expect = 4.465e-16
Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 3 
Query:  246 VMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            V N +      + ++      + P+QM CPSC  ++VT++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   68 VPNANAIAVQTVYVQQPVSFYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Litaf (LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512])

HSP 1 Score: 73.1738 bits (178), Expect = 4.465e-16
Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 3 
Query:  246 VMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            V N +      + ++      + P+QM CPSC  ++VT++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   68 VPNANAIAVQTVYVQQPVSFYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876])

HSP 1 Score: 59.6918 bits (143), Expect = 6.121e-11
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 3 
Query:  237 SSSVMNGHNYGTTQIILEPHAEIRE-YPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF--CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +++V+      TT  +L+   EI E  P+Q +CP CQ  + T++  E G ++++L G FC F  C + C ++   I D KD  H CP+C A I  Y R
Sbjct:   95 TATVLVPSGAATTVTVLQ--GEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVL-GFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKR 189
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876])

HSP 1 Score: 59.6918 bits (143), Expect = 8.380e-11
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 3 
Query:  237 SSSVMNGHNYGTTQIILEPHAEIRE-YPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF--CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +++V+      TT  +L+   EI E  P+Q +CP CQ  + T++  E G ++++L G FC F  C + C ++   I D KD  H CP+C A I  Y R
Sbjct:  112 TATVLVPSGAATTVTVLQ--GEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVL-GFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKR 206
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876])

HSP 1 Score: 59.6918 bits (143), Expect = 8.380e-11
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 3 
Query:  237 SSSVMNGHNYGTTQIILEPHAEIRE-YPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF--CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +++V+      TT  +L+   EI E  P+Q +CP CQ  + T++  E G ++++L G FC F  C + C ++   I D KD  H CP+C A I  Y R
Sbjct:  112 TATVLVPSGAATTVTVLQ--GEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVL-GFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKR 206
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q8QGW7|LITAF_CHICK (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Gallus gallus OX=9031 GN=LITAF PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.923e-21
Identity = 51/138 (36.96%), Postives = 69/138 (50.00%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTPM---SSSVMNGHNYG------------TTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWL-LSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+  V  +V  P PY +  P        MN   Y              T  + +P     + P+QM CPSC  ++VTR+  E+GAL+WL   GLF   C+  C ++  C+   KD  HFCPNC+A +G Y R
Sbjct:   10 PSAPPSYEETVGINVNYPHPYPVPQPGLRPDGKGMNPPQYSGQPMPTSTPVTVQTVYVQQPVVLFYDRPVQMSCPSCNQMIVTRLCYESGALTWLSCGGLFLLGCIAGCCLIPFCVDALKDVEHFCPNCNAHVGSYKR 147
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q6P828|LITAF_XENTR (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Xenopus tropicalis OX=8364 GN=litaf PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.546e-19
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYS-IHTPMSSSVMNGHNYGTTQIILEPHAEIR-----------EYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+    E+    PPY  +H  M +  M+   Y    + ++P   ++           + P+QM C SC +++ TR+E  +GAL+WL  G  C   C+  C ++  CI   KD  H+CPNC A++G Y R
Sbjct:   17 PSAPPSYE----EATFHHPPYPPLHQGMDAKNMSNPPYIVQPVPMQPPVTVQTVYVQQAMTLYDRPVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSYKR 147
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q6GMG8|LITAF_DANRE (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Danio rerio OX=7955 GN=litaf PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.642e-16
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  150 MKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWL-LSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            MK S PP Y T  +E     PP +   P++S V+         + ++P       P+Q  CP C   V+TR+E  +G L WL  +GL  F C+  C ++  CI D KD  H CPNC +++G + R
Sbjct:   45 MKASGPPPYPT--QEYNQMYPPTAQGQPVTSPVV-----AVQTVYVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPLVWLSCAGLAVFGCIYGCCLIPFCIEDLKDVTHHCPNCSSVLGVHKR 162
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q9JLJ0|LITAF_MOUSE (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Mus musculus OX=10090 GN=Litaf PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.124e-15
Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 3 
Query:  246 VMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            V N +      + ++      + P+QM CPSC  ++VT++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   68 VPNANAIAVQTVYVQQPVSFYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|P0C0T0|LITAF_RAT (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Rattus norvegicus OX=10116 GN=Litaf PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.433e-15
Identity = 32/93 (34.41%), Postives = 49/93 (52.69%), Query Frame = 3 
Query:  246 VMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            V N +      + ++      + PIQM CPSC  ++VT++    GAL+WL  G  C   C+  C  +  C+   +D  H+CPNC A++G Y R
Sbjct:   68 VPNANAIAVQTVYVQQPISFYDRPIQMCCPSCNKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKR 160
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: F1NNL3 (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Gallus gallus OX=9031 GN=LITAF PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.344e-19
Identity = 51/138 (36.96%), Postives = 69/138 (50.00%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTPM---SSSVMNGHNYG------------TTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWL-LSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+  V  +V  P PY +  P        MN   Y              T  + +P     + P+QM CPSC  ++VTR+  E+GAL+WL   GLF   C+  C ++  C+   KD  HFCPNC+A +G Y R
Sbjct:   10 PSAPPSYEETVGINVNYPHPYPVPQPGLRPDGKGMNPPQYSGQPMPTSTSVTVQTVYVQQPVVLFYDRPVQMSCPSCNQMIVTRLCYESGALTWLSCGGLFLLGCIAGCCLIPFCVDALKDVEHFCPNCNAHVGSYKR 147
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A2I0M4D1 (Lipopolysaccharide-induced TNF factor, transcript variant X1 OS=Columba livia OX=8932 GN=LITAF PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.856e-19
Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNG-----HNYGTTQIILEPHAEI-REYPIQMICPSCQNLVVTRVEEETGALSWL-LSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+     +V  P PY +  P       G     HN  T Q +      I  + P+QM CPSC  ++VTR+  ++GAL+WL   GLF   C+  C ++  CI   KD  H CPNC A++G Y R
Sbjct:   10 PSAPPSYEETTGINVNYPHPYPMPGPEQKPPYMGQPAPAHNPVTVQTVYVQQPVIFYDRPVQMRCPSCNQMIVTRLSYDSGALTWLSCGGLFLLGCVAGCCLIPFCIDALKDVDHTCPNCSALLGSYKR 138
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A2P4TB50 (LITAF domain-containing protein OS=Bambusicola thoracicus OX=9083 GN=CIB84_002657 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.220e-19
Identity = 52/138 (37.68%), Postives = 69/138 (50.00%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTPM---SSSVMNGHNYG------------TTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWL-LSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+  V  +V  P PY +  P        MN   Y              T  + +P     + P+QM CPSC  ++VTR+  E+GAL+WL   GLF   C+  C ++  CI   KD  HFCPNC+A +G Y R
Sbjct:   13 PSAPPSYEETVGINVNYPHPYPVPEPGLRPDGKGMNPPQYSGQPTPTSRPVTVQTVYVQQPVVLFYDRPVQMSCPSCNQMIVTRLCYESGALTWLSCGGLFLVGCIAGCCLIPFCIDALKDVEHFCPNCNAHVGSYKR 150
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A493T1T7 (Lipopolysaccharide induced TNF factor OS=Anas platyrhynchos platyrhynchos OX=8840 GN=LITAF PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.776e-18
Identity = 49/138 (35.51%), Postives = 68/138 (49.28%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTP-------------MSSSVMNGHNYGTTQIIL--EPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+     +V  P PY +  P              +   M  +N  T Q +   +P     + P+QM CPSC  ++VTR+  E+GAL+WL  G  C   C+  C ++  CI   KD  HFCPNC+  +G Y R
Sbjct:   10 PSAPPSYEETTGINVNYPHPYPVPDPGQKPDGKGMNPPPYTGQPMPTNNPVTVQTVYVQQPVVVFYDRPVQMCCPSCNQMIVTRLSYESGALTWLSCGGLCLLGCIAGCCLIPFCIDALKDVDHFCPNCNTHVGSYKR 147
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: R0KR32 (Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like protein (Fragment) OS=Anas platyrhynchos OX=8839 GN=Anapl_11446 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.776e-18
Identity = 49/138 (35.51%), Postives = 68/138 (49.28%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTP-------------MSSSVMNGHNYGTTQIIL--EPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PSAPP Y+     +V  P PY +  P              +   M  +N  T Q +   +P     + P+QM CPSC  ++VTR+  E+GAL+WL  G  C   C+  C ++  CI   KD  HFCPNC+  +G Y R
Sbjct:   10 PSAPPSYEETTGINVNYPHPYPVPDPGQKPDGKGMNPPPYTGQPMPTNNPVTVQTVYVQQPVVVFYDRPVQMCCPSCNQMIVTRLSYESGALTWLSCGGLCLLGCIAGCCLIPFCIDALKDVDHFCPNCNTHVGSYKR 147
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: litaf (lipopolysaccharide-induced TNF factor [Source:NCBI gene;Acc:431731])

HSP 1 Score: 69.3218 bits (168), Expect = 7.235e-15
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 3 
Query:  291 PHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLL-SGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P       P+Q+ CP+C   VVTR++  +G ++WL  +GLF F C+  C ++  C+   KD  H CPNC +++G + R
Sbjct:   74 PGMVFGHTPVQVHCPNCAQTVVTRLDYSSGTMTWLTCAGLFIFGCIYGCCLIPFCVDSLKDVTHHCPNCSSVLGVFKR 151
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: cdip1 (cell death inducing p53 target 1 [Source:NCBI gene;Acc:103033134])

HSP 1 Score: 61.6178 bits (148), Expect = 1.436e-11
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 3 
Query:  237 SSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF--CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +++V+      TT  +L+     +  P+Q +CP CQ  ++TR+  + G ++ L   LFCFF  C + C ++   I D KD  H CPNC   I  Y R
Sbjct:  116 TATVIAPPGAATTVTVLQ-GEMFQSAPVQTVCPHCQQAIITRISHDVGLMNTLFC-LFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKR 210
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000041239.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:195968:202131:-1 gene:ENSAMXG00000040302.1 transcript:ENSAMXT00000041239.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 56.6102 bits (135), Expect = 2.259e-10
Identity = 26/72 (36.11%), Postives = 43/72 (59.72%), Query Frame = 3 
Query:  309 EYPIQMICPSCQNLVVTRVEEETGALSWLL-SGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            + P+Q+ CP+C++  VT+V+   G L++L   GL CF   + C ++  C+   +D  H C NC A++G Y R
Sbjct:   52 DSPVQVTCPTCRHTAVTQVQYTPGLLTYLFCGGLLCF---LGCCLIPFCVDRLRDAKHVCSNCKAVLGVYKR 120
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000055021.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:2621322:2625285:1 gene:ENSAMXG00000041397.1 transcript:ENSAMXT00000055021.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.4546 bits (132), Expect = 2.365e-9
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 3 
Query:  300 EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
             + + P Q+ C  CQ+ V+T      GAL+W + G  C F + P  ++  C   CKD  H CPNC  II  Y R
Sbjct:  147 SLGDLPGQVRCGFCQHNVITVTRYFNGALTWCVFGGLCIFGIWPFCLIPFCCDACKDVEHTCPNCRNIISVYKR 220
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000036300.1 (lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Source:NCBI gene;Acc:111193504])

HSP 1 Score: 53.1434 bits (126), Expect = 5.878e-9
Identity = 33/86 (38.37%), Postives = 44/86 (51.16%), Query Frame = 3 
Query:  279 IILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSW-----LLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++++PH  + E P +M C  CQ  +VT  +  TG L+W     LL+ L   FCLIP      C   CKD  H CP C  I+  Y R
Sbjct:   53 VVVQPH--LGESPGRMKCMYCQQEIVTVTKPVTGILTWTIFGVLLACLIWPFCLIP-----FCCAPCKDVEHTCPYCHNILSVYKR 131
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO33373 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF9])

HSP 1 Score: 63.1586 bits (152), Expect = 1.663e-13
Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 3 
Query:  252 NGHNYGTTQIILEPHAEI------REYPIQMICPSCQNLVVTRVEEETGALSWLLS-GLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
             G  Y TT +I +P   +       E P+ M CP+C   +VT  +  TG L+WL   GL    C + C  +  C+   KD +H CPNC + +G + R
Sbjct:    6 QGQPYATTTVIQQPATVVVNPIGFYETPVSMNCPTCHATIVTATDYVTGTLTWLACFGLCIIGCDLGCCFIPFCVDSMKDVVHTCPNCRSQVGVFRR 102
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO42963 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S062])

HSP 1 Score: 62.7734 bits (151), Expect = 2.368e-13
Identity = 34/106 (32.08%), Postives = 49/106 (46.23%), Query Frame = 3 
Query:  207 PPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLS-GLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PP Y I+ P   + +         +++       E P  M+CP CQ  +VT      G  +WL+   +FCFF   PC  L   +  CKD +H CPNC   +G + R
Sbjct:    4 PPGYGINPPQQHTTVIQQQ---PTVVVTGGVSFGESPTSMVCPYCQATIVTATSYVPGTCAWLICLVIFCFF--WPCCFLPFVLDGCKDVVHSCPNCQRQVGVFTR 104
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO37753 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SES1])

HSP 1 Score: 60.8474 bits (146), Expect = 5.330e-13
Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 3 
Query:  324 MICPSCQNLVVTRVEEETGALSWLLSGLFCFFC-LIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            M+C  CQ  +VT      GAL+WLLSG  C     + C ++  C+  CKD IH CPNC A +G Y R
Sbjct:    1 MVCSFCQTHIVTATTYRYGALTWLLSGGICLLGGWLGCCLIPFCLDGCKDVIHTCPNCQAQLGVYRR 67
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO37779 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEW4])

HSP 1 Score: 52.373 bits (124), Expect = 9.540e-9
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 3 
Query:  285 LEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGL-FCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            LE   + R+  +   C SC N ++T V    G ++  +S L F   C+  C ++   I   +D IH CPNC   +G+Y R
Sbjct:   76 LEDRQDYRDESVYTFCGSCMNHMMTVVRFRIGRMTVAVSALVFMLGCVAGCCLVPFIIKGLRDVIHSCPNCQITLGKYRR 155
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: si:ch211-202h22.9 (si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143])

HSP 1 Score: 72.7886 bits (177), Expect = 7.145e-16
Identity = 30/85 (35.29%), Postives = 49/85 (57.65%), Query Frame = 3 
Query:  267 GTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            G   ++++PH    + P QM+CP CQN VVT+ E + G  +WL+ G+       PC ++  C+  CKD  H CP+C+ ++  + R
Sbjct:  105 GNRMVVVQPHPT--DCPGQMLCPHCQNTVVTKTEHKVGMQTWLIFGVLGIIGCWPCCLIPFCVNSCKDVQHSCPSCNNVLHVHRR 187
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000010755.2 (cell death-inducing p53-target protein 1 homolog [Source:NCBI gene;Acc:105354377])

HSP 1 Score: 63.5438 bits (153), Expect = 6.760e-13
Identity = 44/135 (32.59%), Postives = 66/135 (48.89%), Query Frame = 3 
Query:  165 PPDYDTVVKES------VTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPH------AEIREYPIQMICPSCQNLVVTRVEEETGALSW----LLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            PP Y+ + ++       V++PP Y+  +P +     G    T  ++ +P       + +RE P  ++CP CQ LV T+V+   G  +W     L+ LFC FCLIP AV       C+D  HFCP C   I  + R
Sbjct:    3 PPSYEEISQQPPALVIPVSNPPAYTPPSPSTPPPAYGDGQ-TVAVVSQPSPVPIIVSCLRESPGLVVCPHCQELVTTKVKHVAGKQAWGICMTLTLLFCGFCLIPFAV-----PHCQDVAHFCPGCKKKIYVFER 131
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000034967.1 (pep primary_assembly:ASM223467v1:8:13374012:13375390:1 gene:ENSORLG00000029819.1 transcript:ENSORLT00000034967.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 60.077 bits (144), Expect = 9.123e-12
Identity = 33/109 (30.28%), Postives = 54/109 (49.54%), Query Frame = 3 
Query:  195 SVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            +++ PPP          V++G N    Q + +  A +R+ P    C  CQ  V+TR   E GA++W+  G        PC +L  C+  CKD  H+CP+C+ ++  Y +
Sbjct:   15 NLSKPPP----------VLSG-NCPIWQHLTQVTAPLRDTPGVTFCVYCQKNVLTRTSFEIGAMAWVFCGGITLLGCWPCMLLPFCLDSCKDVKHYCPSCNNLLHFYRK 112
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: cdip1 (cell death inducing p53 target 1 [Source:NCBI gene;Acc:101173632])

HSP 1 Score: 61.6178 bits (148), Expect = 1.186e-11
Identity = 35/124 (28.23%), Postives = 57/124 (45.97%), Query Frame = 3 
Query:  156 PSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF--CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P  P  + + +   +   P + +H    ++ + G     T + +      +  P+Q +CP CQ  +VTR+  + G ++ L   LFCFF  C + C ++   I D KD  H CP C   I  Y R
Sbjct:   81 PLPPGHFASPIPGQMGPGPGHFVHMGGQTTTVLGPPGAATTVTVLQGEMFQTSPVQTVCPHCQQAIVTRISHDVGLMNTLFC-LFCFFVGCDLGCCLIPCLIDDLKDVTHTCPYCKGYIYTYKR 203
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000037533.1 (pep primary_assembly:ASM223467v1:1:23682164:23683902:-1 gene:ENSORLG00000026577.1 transcript:ENSORLT00000037533.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 58.9214 bits (141), Expect = 2.447e-11
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 3 
Query:  315 PIQMICPSCQNLVVTRVEEETGALSWLLSG--LFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P+Q+ CP C   V+++V+   G L++LL G   FC F ++ C ++  C+   KD  H CP+C  I+G Y R
Sbjct:   36 PVQIACPKCHRTVLSKVDHSAGLLTYLLCGGLFFCGF-VLGCCLIPFCVDRVKDAKHSCPSCKTILGVYKR 105
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000064937.1 (SMESG000064937.1)

HSP 1 Score: 258.84 bits (660), Expect = 1.258e-89
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 3 
Query:  150 MKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            MKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR
Sbjct:    1 MKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHAEIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 124
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000079265.1 (SMESG000079265.1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.285e-12
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 3 
Query:  315 PIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            P+ M+CP C + +VT V  + G L++LL+ + CF  C+  C ++   +   KD  H+CP C+A++G Y R
Sbjct:    2 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 71
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000020853.1 (SMESG000020853.1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.276e-12
Identity = 36/115 (31.30%), Postives = 58/115 (50.43%), Query Frame = 3 
Query:  201 TSPPPYSIHTP--MSSSVMNGH--NYGTTQIILEPHAEIREY---PIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFC-LIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            T+PPPY  + P   +     G     G  Q++ +   + + Y   P+  +CP CQ  +VT +  + G L+WLL G        + C ++  C+ DCKD IH CP+C+  +G + R
Sbjct:   13 TAPPPYPQNAPYPQAGQYQAGQPVQTGQPQVVYQTIIQNQVYGCLPVNTVCPHCQAQIVTGIRYDNGLLTWLLCGGLALLGCWLGCCLIPFCVDDCKDVIHVCPSCNMKVGEHRR 127
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000033033.1 (SMESG000033033.1)

HSP 1 Score: 59.3066 bits (142), Expect = 8.291e-12
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 3 
Query:  324 MICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            ++CP C   ++T V+ + G  +WL       FC + C ++  C+ +CKD  HFCP CD  +GRY R
Sbjct:   27 IVCPKCLEEILTVVKFKVGCQTWLFCFGIGIFCPLGCCLIPFCLRECKDAHHFCPKCDRYLGRYKR 92
[Close]
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000079265.1 (SMESG000079265.1)

HSP 1 Score: 55.8398 bits (133), Expect = 9.784e-11
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 3 
Query:  324 MICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNR 521
            M+CP C + +VT V  + G L++LL+ + CF  C+  C ++   +   KD  H+CP C+A++G Y R
Sbjct:    1 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 67
The following BLAST results are available for this feature:
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
LITAF9.727e-1537.21lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF9.727e-1537.21lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF9.727e-1537.21lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF9.727e-1537.21lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF9.727e-1537.21lipopolysaccharide induced TNF factor [Source:HGNC... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
F36G3.34.748e-1433.57pep chromosome:WBcel235:X:9798839:9801038:1 gene:W... [more]
Y37D8A.86.507e-1040.58pep chromosome:WBcel235:III:12864948:12867591:1 ge... [more]
nmr-11.633e-933.77NMDA class glutamate Receptor; NMDA-type ionotropi... [more]
nmr-11.633e-933.77NMDA class glutamate Receptor; NMDA-type ionotropi... [more]
Y87G2A.181.207e-832.50pep chromosome:WBcel235:I:13512384:13514320:-1 gen... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CG322808.612e-1333.07gene:FBgn0052280 transcript:FBtr0073031[more]
CG322808.612e-1333.07gene:FBgn0052280 transcript:FBtr0073030[more]
CG322808.612e-1333.07gene:FBgn0052280 transcript:FBtr0344220[more]
CG322808.612e-1333.07gene:FBgn0052280 transcript:FBtr0073032[more]
CG302691.657e-1233.33gene:FBgn0050269 transcript:FBtr0071867[more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
litaf2.176e-1735.20lipopolysaccharide-induced TNF factor [Source:NCBI... [more]
si:ch211-202h22.83.089e-1333.73si:ch211-202h22.8 [Source:ZFIN;Acc:ZDB-GENE-090313... [more]
si:ch211-202h22.83.089e-1333.73si:ch211-202h22.8 [Source:ZFIN;Acc:ZDB-GENE-090313... [more]
si:ch211-202h22.78.214e-1233.04si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313... [more]
si:ch211-202h22.71.104e-1130.09si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
aff22.833e-1934.07AF4/FMR2 family member 2 [Source:Xenbase;Acc:XB-GE... [more]
ENSXETT00000031517.18.199e-1436.84LITAF domain containing [Source:NCBI gene;Acc:1004... [more]
pfkfb41.326e-1327.846-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
pfkfb41.466e-1327.846-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
pfkfb41.518e-1331.586-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Litaf4.465e-1633.33LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1... [more]
Litaf4.465e-1633.33LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1... [more]
Cdip16.121e-1135.71cell death inducing Trp53 target 1 [Source:MGI Sym... [more]
Cdip18.380e-1135.71cell death inducing Trp53 target 1 [Source:MGI Sym... [more]
Cdip18.380e-1135.71cell death inducing Trp53 target 1 [Source:MGI Sym... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8QGW7|LITAF_CHICK1.923e-2136.96Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q6P828|LITAF_XENTR7.546e-1934.07Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q6GMG8|LITAF_DANRE1.642e-1635.20Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q9JLJ0|LITAF_MOUSE3.124e-1533.33Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|P0C0T0|LITAF_RAT3.433e-1534.41Lipopolysaccharide-induced tumor necrosis factor-a... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
F1NNL35.344e-1936.96Lipopolysaccharide-induced tumor necrosis factor-a... [more]
A0A2I0M4D16.856e-1938.76Lipopolysaccharide-induced TNF factor, transcript ... [more]
A0A2P4TB507.220e-1937.68LITAF domain-containing protein OS=Bambusicola tho... [more]
A0A493T1T73.776e-1835.51Lipopolysaccharide induced TNF factor OS=Anas plat... [more]
R0KR323.776e-1835.51Lipopolysaccharide-induced tumor necrosis factor-a... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
litaf7.235e-1537.18lipopolysaccharide-induced TNF factor [Source:NCBI... [more]
cdip11.436e-1134.02cell death inducing p53 target 1 [Source:NCBI gene... [more]
ENSAMXT00000041239.12.259e-1036.11pep primary_assembly:Astyanax_mexicanus-2.0:12:195... [more]
ENSAMXT00000055021.12.365e-937.84pep primary_assembly:Astyanax_mexicanus-2.0:12:262... [more]
ENSAMXT00000036300.15.878e-938.37lipopolysaccharide-induced tumor necrosis factor-a... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO333731.663e-1334.02Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO429632.368e-1332.08Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO377535.330e-1344.78Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO377799.540e-932.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:ch211-202h22.97.145e-1635.29si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131... [more]
ENSORLT00000010755.26.760e-1332.59cell death-inducing p53-target protein 1 homolog [... [more]
ENSORLT00000034967.19.123e-1230.28pep primary_assembly:ASM223467v1:8:13374012:133753... [more]
cdip11.186e-1128.23cell death inducing p53 target 1 [Source:NCBI gene... [more]
ENSORLT00000037533.12.447e-1138.03pep primary_assembly:ASM223467v1:1:23682164:236839... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000064937.11.258e-89100.00SMESG000064937.1[more]
SMESG000079265.13.285e-1237.14SMESG000079265.1[more]
SMESG000020853.16.276e-1231.30SMESG000020853.1[more]
SMESG000033033.18.291e-1237.88SMESG000033033.1[more]
SMESG000079265.19.784e-1137.31SMESG000079265.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032785 ID=SMED30032785|Name=Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like|organism=Schmidtea mediterranea sexual|type=transcript|length=587bp
AAAATATTTAAGCCCTGATTTAAATTATTTGAATTTTTTAATTTTTTTGA
TTAAAAATTTCTTTAAAGTAAATATAATAAAAAAGAAAATATTATAAAGT
TCAAATATCTTTGTAAAATTTAAATCTCATTCTAATACAGTCATTTTTGA
TGAAACCTTCAGCCCCACCTGATTATGACACTGTTGTTAAAGAGTCGGTT
ACTTCTCCTCCGCCTTATTCAATACACACACCAATGTCATCATCTGTAAT
GAATGGACATAATTATGGAACAACTCAAATAATATTAGAGCCTCATGCAG
AAATTCGTGAATATCCTATTCAAATGATCTGTCCATCGTGTCAAAATTTG
GTCGTTACAAGAGTTGAAGAAGAGACTGGAGCTTTGTCTTGGCTTTTAAG
TGGATTATTTTGTTTTTTCTGCCTTATTCCATGCGCTGTCTTGGCACTAT
GTATTGGAGACTGTAAAGACACAATTCACTTTTGCCCAAATTGTGATGCT
ATAATTGGTAGATATAACCGCTTATAATTTTGGTGATTATTTGTTACTTT
ATTTTTGAATTTTTAATAAAAAAATAACTGAAAGGAA
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protein sequence of SMED30032785-orf-1

>SMED30032785-orf-1 ID=SMED30032785-orf-1|Name=SMED30032785-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=126bp
MKPSAPPDYDTVVKESVTSPPPYSIHTPMSSSVMNGHNYGTTQIILEPHA
EIREYPIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFFCLIPCAVLAL
CIGDCKDTIHFCPNCDAIIGRYNRL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO:0005737cytoplasm
GO:0005765lysosomal membrane
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000018Category 4 cell
PLANA:0000034epidermis
Vocabulary: INTERPRO
TermDefinition
IPR037519LITAF_fam
IPR006629LITAF
Vocabulary: biological process
TermDefinition
GO:0001816cytokine production
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0019953sexual reproduction
Vocabulary: molecular function
TermDefinition
GO:0005125cytokine activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006629LPS-induced tumour necrosis factor alpha factorSMARTSM00714litafcoord: 56..124
e-value: 3.6E-26
score: 102.9
IPR006629LPS-induced tumour necrosis factor alpha factorPFAMPF10601zf-LITAF-likecoord: 55..122
e-value: 2.8E-22
score: 78.7
IPR006629LPS-induced tumour necrosis factor alpha factorPROSITEPS51837LITAFcoord: 41..124
score: 18.532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
IPR037519LITAF domain containing proteinPANTHERPTHR23292LIPOPOLYSACCHARIDE-INDUCED TRANSCRIPTION FACTOR REGULATING TUMOR NECROSIS FACTOR ALPHAcoord: 4..124