Ddb1 and cul4 associated factor 13

Overview
NameDdb1 and cul4 associated factor 13
Smed IDSMED30032733
Length (bp)1445
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Ddb1 and cul4 associated factor 13 (SMED30032733) t-SNE clustered cells

Violin plots show distribution of expression levels for Ddb1 and cul4 associated factor 13 (SMED30032733) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ddb1 and cul4 associated factor 13 (SMED30032733) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ddb1 and cul4 associated factor 13 (SMED30032733) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30032733

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30032733SMESG000049312.1 SmedASXL_008146SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30032733SMESG000049312.1 SmedASXL_008146SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Human
Match: DCAF13 (DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:HGNC:24535])

HSP 1 Score: 304.294 bits (778), Expect = 3.161e-98
Identity = 168/439 (38.27%), Postives = 251/439 (57.18%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN--CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK D+ ++ RN    LHPF   REY+RA+N +K+ER+ +KPF+ SL+G  D V  ++      +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   +  +  P+++   + V   +     +   A    + V ++    +N  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+   P +++I   R +P  I +   E RIMK+ + RKE N I +SKPG+V
Sbjct:    2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQW----KMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQ-VDIWDEQRTNPICSMTWGF-----DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Human
Match: DCAF13 (DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:HGNC:24535])

HSP 1 Score: 303.138 bits (775), Expect = 5.613e-96
Identity = 168/439 (38.27%), Postives = 251/439 (57.18%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN--CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK D+ ++ RN    LHPF   REY+RA+N +K+ER+ +KPF+ SL+G  D V  ++      +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   +  +  P+++   + V   +     +   A    + V ++    +N  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+   P +++I   R +P  I +   E RIMK+ + RKE N I +SKPG+V
Sbjct:  154 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQW----KMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQ-VDIWDEQRTNPICSMTWGF-----DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSV 582
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Human
Match: DCAF13 (DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:HGNC:24535])

HSP 1 Score: 303.138 bits (775), Expect = 5.613e-96
Identity = 168/439 (38.27%), Postives = 251/439 (57.18%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN--CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK D+ ++ RN    LHPF   REY+RA+N +K+ER+ +KPF+ SL+G  D V  ++      +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   +  +  P+++   + V   +     +   A    + V ++    +N  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+   P +++I   R +P  I +   E RIMK+ + RKE N I +SKPG+V
Sbjct:  154 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQW----KMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQ-VDIWDEQRTNPICSMTWGF-----DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSV 582
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Human
Match: DCAF13 (DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:HGNC:24535])

HSP 1 Score: 129.798 bits (325), Expect = 1.416e-34
Identity = 65/145 (44.83%), Postives = 89/145 (61.38%), Query Frame = 1 
Query:  646 ESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYIL 1080
            +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+
Sbjct:   60 DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIM 204
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Human
Match: DCAF13 (DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:HGNC:24535])

HSP 1 Score: 115.546 bits (288), Expect = 4.409e-29
Identity = 69/221 (31.22%), Postives = 113/221 (51.13%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN--CEVYTSFGQKEKESFHYVKFNPTETDIF 693
            KVK+L RNP +++RETK D+ ++ RN    LHPF   REY+RA+N +K+ER+ +KPF+ SL+G  D V  ++      +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   +  +  P+++   + V   +     +   A    + V ++    +N  C +   F     +S   VKFNP E   F
Sbjct:    2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQW----KMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQ-VDIWDEQRTNPICSMTWGF-----DSISSVKFNPIEVMFF 212
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Celegans
Match: ZK430.7 (pep chromosome:WBcel235:II:4422463:4424902:-1 gene:WBGene00022742.1 transcript:ZK430.7.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZK430.7)

HSP 1 Score: 270.396 bits (690), Expect = 1.512e-85
Identity = 148/426 (34.74%), Postives = 237/426 (55.63%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVS--HFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKE 1311
            K+KV+ RNP  + RET +  +KI RN      PF    EY RA+N +K+ER+ +KPF+ SL+G +D VQV++      S    G  DG+++ WN++S    +   AH G+++ +S  + +G NF+T G D  + +W    +        + TP +S  ++ +   +S  L      V   E + V+K          + G    ++ H  + NP E ++  G  S   I + D RQ     ++ +  + N +S+NP   + FT  S DY+LYTFD+RY + PV+ H G   +V DV YS  G+EFV+   D++IR+F   D  SR++Y  KRM  VL+V ++ D  ++LS S++ N+R+WKANAAEKLGP T REK +    ++LR+ Y  +P+VR+I   R +P  I T   E ++++  + R++
Sbjct:    2 KIKVISRNPNTYQRETTDKRNKIVRNFNTPADPFRSQVEYTRALNATKLERVFAKPFVASLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDISIDNNNGENFVTVGQDNQLKYWKIEGQ--------QKTPAHSIAMDGIVYGVS-HLSFSSDFVTCGEDISVWKPYRETPLRSYNLGT---DTIHTCRANPVEENVIVGARSDRSIYVLDTRQDVPLKKVTMKMRPNKISWNPMEAYNFTVASEDYSLYTFDMRYMEHPVQSHQGFTSAVLDVDYSPTGQEFVAAGYDRSIRLFKARDMTSRDVYYTKRMASVLSVLWSADSKFVLSGSNEMNIRVWKANAAEKLGPLTKREKQAFAYNEKLRDTYKNHPEVRRIAKHRNVPRHIFTAAKEHKLIRDARGRRD 415
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Celegans
Match: rack-1 (Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215])

HSP 1 Score: 48.521 bits (114), Expect = 5.487e-6
Identity = 29/86 (33.72%), Postives = 49/86 (56.98%), Query Frame = 1 
Query:  877 PVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEK 1134
            PV+  TGH   VSDV  S+ G+  +S   DKT+R+++ +  +S   + +     VL+V ++ D+  I+S S D +++LW   A  K
Sbjct:   61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK 145
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Celegans
Match: rack-1 (Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215])

HSP 1 Score: 48.521 bits (114), Expect = 5.487e-6
Identity = 29/86 (33.72%), Postives = 49/86 (56.98%), Query Frame = 1 
Query:  877 PVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEK 1134
            PV+  TGH   VSDV  S+ G+  +S   DKT+R+++ +  +S   + +     VL+V ++ D+  I+S S D +++LW   A  K
Sbjct:   61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK 145
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Celegans
Match: rack-1 (Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215])

HSP 1 Score: 48.521 bits (114), Expect = 5.487e-6
Identity = 29/86 (33.72%), Postives = 49/86 (56.98%), Query Frame = 1 
Query:  877 PVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEK 1134
            PV+  TGH   VSDV  S+ G+  +S   DKT+R+++ +  +S   + +     VL+V ++ D+  I+S S D +++LW   A  K
Sbjct:   61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK 145
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Fly
Match: CG7275 (gene:FBgn0036500 transcript:FBtr0075547)

HSP 1 Score: 285.034 bits (728), Expect = 3.765e-91
Identity = 159/450 (35.33%), Postives = 250/450 (55.56%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHF-DGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSK-----PGTVEKQAKFMK 1371
            KVK++ RNP +++RETK   HK+ RN   +LHP    REYVRA+N +K++R+ +KPF+ +L+G  D V          S  A G  DG ++ W++++ +   +F AHDG + G+++  +GG   T G DK I  W    K++     +   PVN+   +     +S    D   A     C  ++    ++      +G    ++ H + +NP ET I     S   I +YD R+++   ++ LT KSN +++NP   F FT  + D NLYTFD R  ++P+K+H  H  +V+DV YS  G+EFVS   DKTIRI+N   S SR+IY  KRM  V+ V ++ D+ Y+ S S + NVR+WKANA+EKLG   PRE+ +    + L++KY  +P +++I   R +P  +     + R +K+K+  KE N+  ++K     P   EK+   +K
Sbjct:    2 KVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVCNLSGHRDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQNGGRIFTVGDDKTIKVW----KAEAPEVGEDEVPVNTILSKFGLHGISHNRRDNKFATCGEVCA-IWDERHNDPLKTLKWGV---DTLHTISYNPVETSILACCASDRSIILYDQREAQPLRKVVLTMKSNKLAWNPMEAFNFTVANEDCNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTKRMQHVVCVAWSLDNRYVFSGSDEMNVRMWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIKRIARHRQVPRHVLNAQKKMRTVKEKEQVKEANVRKHTKKSKKVPYVSEKKKHVLK 443
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Fly
Match: Lis-1 (gene:FBgn0015754 transcript:FBtr0087241)

HSP 1 Score: 50.8322 bits (120), Expect = 1.971e-6
Identity = 42/165 (25.45%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:  643 KESFHYVKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLKL-THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANA 1125
            + S   V F+P    IF  + S+++   I I+D    E    LK  T     ++F+        +CSAD ++  +D +     +K   GH  +VS V++   G   +S   D+TI+++        + YT  R   V  VR   + +   + S+D  +R+W  N+
Sbjct:  108 RASITRVIFHP----IFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA-QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDQTIRVWLTNS 266
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Fly
Match: Lis-1 (gene:FBgn0015754 transcript:FBtr0304747)

HSP 1 Score: 50.8322 bits (120), Expect = 1.971e-6
Identity = 42/165 (25.45%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:  643 KESFHYVKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLKL-THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANA 1125
            + S   V F+P    IF  + S+++   I I+D    E    LK  T     ++F+        +CSAD ++  +D +     +K   GH  +VS V++   G   +S   D+TI+++        + YT  R   V  VR   + +   + S+D  +R+W  N+
Sbjct:  108 RASITRVIFHP----IFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA-QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDQTIRVWLTNS 266
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Fly
Match: Lis-1 (gene:FBgn0015754 transcript:FBtr0087240)

HSP 1 Score: 50.8322 bits (120), Expect = 1.971e-6
Identity = 42/165 (25.45%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:  643 KESFHYVKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLKL-THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANA 1125
            + S   V F+P    IF  + S+++   I I+D    E    LK  T     ++F+        +CSAD ++  +D +     +K   GH  +VS V++   G   +S   D+TI+++        + YT  R   V  VR   + +   + S+D  +R+W  N+
Sbjct:  108 RASITRVIFHP----IFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA-QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDQTIRVWLTNS 266
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Fly
Match: Lis-1 (gene:FBgn0015754 transcript:FBtr0087236)

HSP 1 Score: 50.8322 bits (120), Expect = 1.971e-6
Identity = 42/165 (25.45%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:  643 KESFHYVKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLKL-THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANA 1125
            + S   V F+P    IF  + S+++   I I+D    E    LK  T     ++F+        +CSAD ++  +D +     +K   GH  +VS V++   G   +S   D+TI+++        + YT  R   V  VR   + +   + S+D  +R+W  N+
Sbjct:  108 RASITRVIFHP----IFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA-QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDQTIRVWLTNS 266
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Zebrafish
Match: dcaf13 (ddb1 and cul4 associated factor 13 [Source:NCBI gene;Acc:393097])

HSP 1 Score: 307.76 bits (787), Expect = 9.139e-100
Identity = 173/455 (38.02%), Postives = 257/455 (56.48%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGT----SECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV----EKQAKFMKPV 1377
            KVKVL RNP D++RET  DI ++ RN   TLHPF   REY RA+N +K+ER+ +KPF+ SL+G  D +  IS    + S    G  DG ++ WN+         +AH+G + G+ S F G +F T G DK I  W+         +  +  P+N+   + V   +     D H   GT     + V ++    S+  +  S+G    +SF  V++NP ETD+     S   I +YD R+S    ++ +  +SN++ +NP   ++FT  + DYNLYT+D+R    PV +H  H  +V DV YS  GREFVS   DKT+RIF KD   SRE+Y  KRM  V+ V+++ D  +I+S S + N+RLWKANA+EKLG  + REK +    ++L +K+  +P VR+I   R +P  +     E + MK+ + RKE+N+  +SKPG+V    EK+   +K V
Sbjct:    2 KVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLDGHRDGISCISKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFCGTSFFTVGDDKTIKQWNMEAPG----YGVREEPINTILGKAVFTGI-----DHHQREGTFVTCGQTVDIWDEQRSSPVLSFSWGV---DSFSSVRYNPVETDLLASCASDRSIVLYDTRESAPLRKVIMQLRSNTLCWNPMEAYYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTGREFVSASFDKTVRIFPKDKGHSREVYHTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKANASEKLGVLSTREKTAANYNKKLIQKFQHHPQVRRIARHRHLPRDVLKQKRELKEMKEARRRKEQNVRKHSKPGSVPLLTEKEKHVVKVV 444
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Zebrafish
Match: pafah1b1a (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:NCBI gene;Acc:394246])

HSP 1 Score: 55.8398 bits (133), Expect = 5.530e-8
Identity = 36/106 (33.96%), Postives = 50/106 (47.17%), Query Frame = 1 
Query:  814 FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
               +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I SSS+D  VR+W     E
Sbjct:  164 LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Zebrafish
Match: pafah1b1a (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:NCBI gene;Acc:394246])

HSP 1 Score: 55.8398 bits (133), Expect = 5.530e-8
Identity = 36/106 (33.96%), Postives = 50/106 (47.17%), Query Frame = 1 
Query:  814 FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
               +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I SSS+D  VR+W     E
Sbjct:  164 LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Zebrafish
Match: pafah1b1b (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:NCBI gene;Acc:394247])

HSP 1 Score: 52.7582 bits (125), Expect = 5.003e-7
Identity = 45/161 (27.95%), Postives = 72/161 (44.72%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKT++++        + +T  R   V  VR   D T + S S+D  VR+W     E
Sbjct:  114 VIFHP----VFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLLASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Zebrafish
Match: pafah1b1b (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:NCBI gene;Acc:394247])

HSP 1 Score: 52.7582 bits (125), Expect = 5.003e-7
Identity = 45/161 (27.95%), Postives = 72/161 (44.72%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKT++++        + +T  R   V  VR   D T + S S+D  VR+W     E
Sbjct:  114 VIFHP----VFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLLASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Xenopus
Match: dcaf13 (DDB1 and CUL4 associated factor 13 [Source:NCBI gene;Acc:407967])

HSP 1 Score: 295.819 bits (756), Expect = 4.808e-95
Identity = 162/437 (37.07%), Postives = 246/437 (56.29%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVS-HFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVKVL RNP D++RETK D+ ++ RN    LHPF   REY RA+N +K+ER+ +KPFI SL+G  D V  I+    + S    G  DG ++ WN++        +AHDG + G+   F G +F T G DK +  W   +    E    K  P+ +   + V   +   ++D  I     + V ++    S      ++G    +S   +KFNP ET I     +   I +YD R+     ++ L  ++N++ +NP   F FT  + ++NLYT+D+RY   PVK+H  H  +V DV YS  G+EFVS   DK+IRIF      SRE+Y  KRM  V  VR++ D+ Y+L  S + N+R+WKANA+EKLG  +PRE+A+    Q+L+EK+  +P +++I   R +P  I +   E +IM++ + +K+ N   +SKPG+V
Sbjct:    2 KVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTSFFTVGDDKTVKQWSMESPGYGE----KVEPIRTILGKTVFTGIDHHMNDA-IFATCGQQVDIWDEQRSAPMRSYAWGV---DSISSIKFNPIETHILSSCGTDRSIVLYDKRKPTPLKKIILEMRTNTLCWNPMEAFIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKLGLLSPRERAAQNYNQKLKEKFHHHPQIKRIARHRHLPRSIYSQIKEQQIMREARRKKDVNRRKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Xenopus
Match: dcaf13 (DDB1 and CUL4 associated factor 13 [Source:NCBI gene;Acc:407967])

HSP 1 Score: 277.715 bits (709), Expect = 4.601e-87
Identity = 152/407 (37.35%), Postives = 227/407 (55.77%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVS-HFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKI 1257
            KVKVL RNP D++RETK D+ ++ RN    LHPF   REY RA+N +K+ER+ +KPFI SL+G  D V  I+    + S    G  DG ++ WN++        +AHDG + G+   F G +F T G DK +  W   +    E    K  P+ +   + V   +   ++D   A    + V ++    S      ++G    +S   +KFNP ET I     +   I +YD R+     ++ L  ++N++ +NP   F FT  + ++NLYT+D+RY   PVK+H  H  +V DV YS  G+EFVS   DK+IRIF      SRE+Y  KRM  V  VR++ D+ Y+L  S + N+R+WKANA+EKLG  +PRE+A+    Q+L+EK+  +P +++I   R +P  I
Sbjct:   93 KVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTSFFTVGDDKTVKQWSMESPGYGE----KVEPIRTILGKTVFTGIDHHMNDAIFATCGQQ-VDIWDEQRSAPMRSYAWGV---DSISSIKFNPIETHILSSCGTDRSIVLYDKRKPTPLKKIILEMRTNTLCWNPMEAFIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKLGLLSPRERAAQNYNQKLKEKFHHHPQIKRIARHRHLPRSI 491
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Xenopus
Match: pafah1b1 (platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:403097])

HSP 1 Score: 54.299 bits (129), Expect = 2.637e-7
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = 1 
Query:  814 FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
               +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I S S+D  VR+W     E
Sbjct:  168 LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 271
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Xenopus
Match: pafah1b1 (platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:403097])

HSP 1 Score: 54.299 bits (129), Expect = 2.755e-7
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = 1 
Query:  814 FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
               +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I S S+D  VR+W     E
Sbjct:  164 LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Xenopus
Match: pafah1b1 (platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:403097])

HSP 1 Score: 53.9138 bits (128), Expect = 2.850e-7
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = 1 
Query:  814 FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
               +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I S S+D  VR+W     E
Sbjct:  164 LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Mouse
Match: Dcaf13 (DDB1 and CUL4 associated factor 13 [Source:MGI Symbol;Acc:MGI:2684929])

HSP 1 Score: 303.908 bits (777), Expect = 3.448e-98
Identity = 170/438 (38.81%), Postives = 251/438 (57.31%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN-CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK DI ++ RN   TLHPF   REYVRA+N +K+ER+ +KPF+ SL+G  D V  ++    + +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   + ++  P+ +   + V   +     D   A    +  +  +   S  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+  +P V++I   R +P  I +   E R+MK+ + RKE N   +SKPG+V
Sbjct:    2 KVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTSFFTVGDDKTVKQW----KMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDEQRTSPVCSMNWGF-----DSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKKVILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Mouse
Match: Dcaf13 (DDB1 and CUL4 associated factor 13 [Source:MGI Symbol;Acc:MGI:2684929])

HSP 1 Score: 303.908 bits (777), Expect = 3.448e-98
Identity = 170/438 (38.81%), Postives = 251/438 (57.31%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN-CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK DI ++ RN   TLHPF   REYVRA+N +K+ER+ +KPF+ SL+G  D V  ++    + +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   + ++  P+ +   + V   +     D   A    +  +  +   S  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+  +P V++I   R +P  I +   E R+MK+ + RKE N   +SKPG+V
Sbjct:    2 KVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTSFFTVGDDKTVKQW----KMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDEQRTSPVCSMNWGF-----DSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKKVILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Mouse
Match: Katnb1 (katanin p80 (WD40-containing) subunit B 1 [Source:MGI Symbol;Acc:MGI:1921437])

HSP 1 Score: 57.3806 bits (137), Expect = 2.513e-8
Identity = 54/211 (25.59%), Postives = 96/211 (45.50%), Query Frame = 1 
Query:  514 NVPQSLSAQLHDQHIAVGTSEC-VLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPF--FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMR--------VLTVRYTYDDTYILSSSSDHNVRLW 1113
            NV   +  +   + +A G  +C V ++     NC +  +      ES   V+ N  E  I  G + S  I ++D+  +++   L + HK+N  S + F+P+  F  + S D N+  +D+R  K  V  + GH Q+V  + +S  G+   S   D T+++++          TA +MM         V  V +  ++  + S SSD  +R W
Sbjct:   22 NVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES---VRLNTPEELIVAG-SQSGSIRVWDLEAAKILRTL-MGHKANICSLD-FHPYGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD---------LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Mouse
Match: Pafah1b1 (platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 [Source:MGI Symbol;Acc:MGI:109520])

HSP 1 Score: 54.6842 bits (130), Expect = 1.519e-7
Identity = 47/161 (29.19%), Postives = 72/161 (44.72%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I S S+D  VR+W     E
Sbjct:  114 VIFHP----VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Mouse
Match: Pafah1b1 (platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 [Source:MGI Symbol;Acc:MGI:109520])

HSP 1 Score: 54.6842 bits (130), Expect = 1.519e-7
Identity = 47/161 (29.19%), Postives = 72/161 (44.72%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T I S S+D  VR+W     E
Sbjct:  114 VIFHP----VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. UniProt/SwissProt
Match: sp|Q5ZLK1|DCA13_CHICK (DDB1- and CUL4-associated factor 13 OS=Gallus gallus OX=9031 GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 1.132e-101
Identity = 170/438 (38.81%), Postives = 253/438 (57.76%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVS-NCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            +VKVL RNP D++RETK D+ ++ RN    LHPF   REYVRA+N +K+ER+ +KPF+ SL+G  D V  ++    + S    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K ++  + ++  P+++   + V   +     D   A    +  +  +   S  C +   F     +S   VKFNP ET +     S   I +YD+RQS    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R+  SPV +H  H  +V DV YS  G+EFVS   DK++RIF  D   SRE+Y  KRM  V+TV++T D  YIL  S + N+RLWKANA+EKLG   PREKA++   Q+L+EK+  +P +++I   R +P  I     E RIM++ + RKE N   +SKPG+V
Sbjct:    2 RVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLSSLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFCGTSFFTVGDDKTVKQW----KMESPGYGEEEEPIHTILGKTVYTGIDHHWKDAVFATCGQQVDIWDEQRTSPMCSLTWGF-----DSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKKVILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDSRYILCGSDEMNIRLWKANASEKLGVLAPREKAAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREARRRKELNRRKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. UniProt/SwissProt
Match: sp|Q5R4T8|DCA13_PONAB (DDB1- and CUL4-associated factor 13 OS=Pongo abelii OX=9601 GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 3.434e-98
Identity = 169/437 (38.67%), Postives = 252/437 (57.67%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK D+ ++ RN   TLHPF   REYVRA+N +K+ER+ +KPF+ SL+G  D V  ++    N +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   +  +  P+++   + V   +     +   A    + V ++    +N     ++G    +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+    +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+   P +++I   R +P  I +   E RIMK+ + RKE N I +SKPG+V
Sbjct:    2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQW----KMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQ-VDIWDEQRTNPVCSMTWGF---DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMSALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. UniProt/SwissProt
Match: sp|Q9NV06|DCA13_HUMAN (DDB1- and CUL4-associated factor 13 OS=Homo sapiens OX=9606 GN=DCAF13 PE=1 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 1.518e-97
Identity = 168/439 (38.27%), Postives = 251/439 (57.18%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN--CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK D+ ++ RN    LHPF   REY+RA+N +K+ER+ +KPF+ SL+G  D V  ++      +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   +  +  P+++   + V   +     +   A    + V ++    +N  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+   P +++I   R +P  I +   E RIMK+ + RKE N I +SKPG+V
Sbjct:    2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQW----KMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQ-VDIWDEQRTNPICSMTWGF-----DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. UniProt/SwissProt
Match: sp|Q803X4|DCA13_DANRE (DDB1- and CUL4-associated factor 13 OS=Danio rerio OX=7955 GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.551e-97
Identity = 172/455 (37.80%), Postives = 256/455 (56.26%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGT----SECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV----EKQAKFMKPV 1377
            KVKVL RNP D++RET  DI ++ RN   TLHPF   REY RA+N +K+ER+ +KPF+ SL+G  D +  I+    + S    G  DG ++ WN+         +AH+G + G+ S F G +F T G DK I  W+         +  +  P+N+   + V   +     D H   GT     + V ++    S+  +  S+G    +SF  V++NP E D+     S   I +YD R+S    ++ +  +SN++ +NP   ++FT  + DYNLYT+D+R    PV +H  H  +V DV YS  GREFVS   DKTIRIF KD   SRE+Y  KRM  V+ V+++ D  +I+S S + N+RLWKANA+EKLG  + REK +    ++L +K+  +P VR+I   R +P  +     E + MK+ + RKE+N+  +SKPG+V    EK+   +K V
Sbjct:    2 KVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLDGHRDVISCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFCGTSFFTVGDDKTIKQWNMEAPG----YGVREEPINTILGKAVFTGI-----DHHQREGTFVTCGQTVDIWDEQRSSPVLSFSWGV---DSFSSVRYNPVEPDLLASCASDRSIVLYDTRESAPLRKVIMQLRSNTLCWNPMEAYYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTGREFVSASFDKTIRIFPKDKGHSREVYHTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKANASEKLGVLSTREKTAANYNKKLIQKFQHHPQVRRIARHRHLPRDVLKQKRELKEMKEARRRKEQNVRKHSKPGSVPLLTEKEKHVVKVV 444
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. UniProt/SwissProt
Match: sp|Q6PAC3|DCA13_MOUSE (DDB1- and CUL4-associated factor 13 OS=Mus musculus OX=10090 GN=Dcaf13 PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 2.412e-97
Identity = 170/438 (38.81%), Postives = 251/438 (57.31%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSN-CEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVK+L RNP +++RETK DI ++ RN   TLHPF   REYVRA+N +K+ER+ +KPF+ SL+G  D V  ++    + +    G  DG ++ WN++    +   +AH+G + G+ + F G +F T G DK +  W    K D   + ++  P+ +   + V   +     D   A    +  +  +   S  C +   F     +S   VKFNP ET +     S   I +YD+RQ+    ++ L  ++N++ +NP   F FT  + DYNLYTFD+R   +PV +H  H  +V DV YS  G+EFVS   DK+IRIF  D S SRE+Y  KRM  V+ V++T D  YI+  S + N+RLWKANA+EKLG  T REKA+    Q+L+EK+  +P V++I   R +P  I +   E R+MK+ + RKE N   +SKPG+V
Sbjct:    2 KVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTSFFTVGDDKTVKQW----KMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDEQRTSPVCSMNWGF-----DSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKKVILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. TrEMBL
Match: W6V129 (DDB1-and CUL4-associated factor OS=Echinococcus granulosus OX=6210 GN=EGR_00562 PE=4 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.308e-116
Identity = 183/429 (42.66%), Postives = 259/429 (60.37%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFL-TCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYT-SFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNI 1320
            K+++L RNP D+LRET +DI K+ RN  +T HPFA +REYVRA+N +K+ RM +KPFI  L GT D + V+S +     LA FGT+DG+IQYW+I+      +  AH G + GV  +D    + +CG D  +  W   + +    W K   P+N+  +++ P SL          VG+ E   +Y S   +  V   ++G   +E+ H   FNP E ++   LT  N I + D R+     +LK+  K NS S+NP  P+ FT  S DYNLYT+D R+FK P +++ GH  +V  V YS  GREF S C D TIR++N + + S ++Y  +RM RVL VR+T D  ++LSSS+D NVRLWKA+A+EKLGP  PRE+ SL  A+ LREKY  +P+VR+I   R +P  I     E RI++ K+ RK RN+
Sbjct:    2 KIRMLSRNPADYLRETADDIFKMPRNHSVTEHPFAAEREYVRALNSAKLSRMMAKPFIGCLEGTTDTMTVMSLNTEKVGLAVFGTADGKIQYWDIAGRKLAYEAPAHAGEVRGVCQYDKSQLMYSCGLDGQLKQWRMDHSNIEAAWSK---PLNTVLLDSTPLSLDHHPSMDAFLVGSPESCFLYHSTRMDVPVREWTWG---REAIHQATFNPVEHNLVGILTKDNSIILADTREDSPLRKLKMNLKLNSFSWNPMEPYVFTAASEDYNLYTYDCRFFKHPKRVYMGHTNAVMAVDYSPSGREFASGCYDGTIRLWNVEQTSSVDVYHTRRMKRVLKVRFTLDGRFLLSSSTDQNVRLWKAHASEKLGPMKPRERESLATAEALREKYKEHPEVRRILRNRHVPKSIYVATKEHRIIRAKEKRKLRNV 424
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. TrEMBL
Match: A0A0V0J589 (WD_REPEATS_REGION domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR20763 PE=4 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 5.754e-115
Identity = 181/429 (42.19%), Postives = 260/429 (60.61%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFL-TCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYT-SFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNI 1320
            K+ +L RNP D+ RET +DI K+ RN   T HPFA +REY+RAMN +K+ R+ +KPF+  L GT D++ ++S +     LA FGT+DG+IQYW I++  +L +  AH G + GV  ++    + TCG D  +  W   +      W +   P+N+  +   P  L        I VGTSE  L+Y S   +  V+  ++G   +E+ H+  FNP E ++   LT  N I + D R+ +   ++K+  K NS S+NP  PF FT  S DYNLYTFD R+FK P ++  GH  +V DV YS  GREF S   D TIRI++ D + S ++Y  +RM RVL +++T D  ++LSSS+D NVRLWKA+A+EKLG   PREKAS   A+ LR K+  +P+VRKI   R +P  I    NE +I++ K+ RK+RN+
Sbjct:    2 KIHMLSRNPSDYRRETADDIFKMPRNYNTTEHPFAAEREYIRAMNSAKLSRLLAKPFLGCLEGTTDNMSIMSLNTEKVGLAVFGTADGKIQYWEIATRKRLYEAPAHAGEVRGVCQYEKSQMMYTCGLDSQLKQWKMDHNDIASSWKE---PLNTVLLNWTPLCLDHHPSADAILVGTSESCLIYHSTRMDVPVFEWTWG---REAVHHASFNPVEHNLVGILTKDNSIILADTREEQPLRKVKMNLKLNSFSWNPMEPFIFTAASEDYNLYTFDCRFFKHPRRVFIGHTNAVMDVDYSPSGREFASAGYDDTIRIWSTDTTSSVDVYHTRRMKRVLKIKFTLDGRFLLSSSTDQNVRLWKAHASEKLGALKPREKASYASAEALRAKFQEHPEVRKILRNRHVPKGILAATNEHKIIRAKERRKQRNV 424
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. TrEMBL
Match: A0A5J4N7M5 (WD repeat and SOF domain-containing protein 1 OS=Paragonimus westermani OX=34504 GN=DEA37_0014669 PE=4 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 3.676e-113
Identity = 181/429 (42.19%), Postives = 262/429 (61.07%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFL-TCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYT-SFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNI 1320
            KV++L RNP DF RETK+DI KI RN   + HPF+ +REYVRA+N +K++RM +KPF+ SL GT + +  IS +     +A FGT+DG+IQYW++S   +L + +AHD  I GVSH +  + + TC  D  +  W  ++      W     P+ S  ++  P  L        + +G +E  L+Y +   +  +   ++GQ   E  H  KFN  E ++ C L+  N + + D RQ E   ++K+  K NS+S+NP  PF FT  S DYN YTFD RYFK P +++ GH  +V DV YS  GREFV+   D TIR++  D S S ++Y  +RM RVL VR+T D  +++SSSSD N+R+WKA+A+EKLGP  PREKA+L  A+ LR K+  +P+V+KI  +R +P  +     E   ++ K+ RKERNI
Sbjct:    2 KVRMLSRNPSDFRRETKDDIFKIPRNYSASEHPFSAEREYVRALNSAKLQRMMAKPFLGSLEGTTERITCISLNSETLGIAVFGTADGKIQYWDVSLRKRLFENQAHDAEIRGVSHCNRSSLMYTCSLDGQLKQWRMNHDDIASAWS---APLTSVLMKWTPHCLDHHPSADELLIGGAESCLLYSAVRMDVPIREWTWGQ---EPVHCAKFNQVEQNVACVLSKDNSLMLIDCRQDEPIRKVKMDLKLNSLSWNPMEPFIFTVASEDYNAYTFDARYFKFPRRVYRGHVNAVLDVDYSPTGREFVTGSYDSTIRLWQVDSSESFDVYHGRRMKRVLAVRFTLDSKFVISSSSDQNIRIWKAHASEKLGPVQPREKAALNMAEALRNKFKEHPEVKKILKKRHVPKAVFAATREHASIRAKERRKERNI 424
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. TrEMBL
Match: A0A4S2LFL2 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_007566 PE=4 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 5.606e-113
Identity = 179/429 (41.72%), Postives = 263/429 (61.31%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFL-TCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYT-SFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNI 1320
            KV++L RNP DF RETK+DI KI RN   + HPFA +REY+RA+N +K++RM +KPF+ +L GT + +  +S +     LA FGT+DG+IQYW+I++   + + +AHD  I G+ H++   F+ TC  D  +  W  ++      W    TP+ +  +   P  L        + VG +E  L+Y +   +  +   S+GQ   E  H  KFN  E ++ C LT  N + + D RQ     ++K+  K NS  +NP  PF FT  S DYN+YT+D RYFK P +++ GH  +V D+ YS  GREFV+   D TIR+++ +D+ S ++Y ++RM RVL VR+T D  ++LSSSSD NVR+WKA+A+EKLGP  PREKAS+  A+ LREK+  +P+VRKI  +R +P  +     E   ++ K  RKERN+
Sbjct:    2 KVRMLSRNPADFRRETKDDIFKIPRNYDASEHPFAAEREYIRAVNAAKLQRMMAKPFLGALEGTTEQMVCLSLNSETLGLAVFGTADGKIQYWDIATRKLIFETRAHDCEIRGICHYNKSRFMYTCSLDGQLKQWRMNHDDIASAWS---TPLTTVLLRWTPHCLDHHPCADELLVGGTESCLLYNAARMDVPIREWSWGQ---EPIHCAKFNQVEFNVACTLTKDNSLMLIDCRQDRPIRKVKMDLKLNSFCWNPMEPFIFTAASEDYNVYTYDTRYFKFPRRVYRGHVNAVLDIDYSPTGREFVTGSYDSTIRLWHVNDAESFDVYHSRRMKRVLGVRFTLDTKFVLSSSSDQNVRVWKAHASEKLGPMQPREKASINLAEALREKFKDHPEVRKILKKRHVPKPVLAATREHTTIRAKWRRKERNM 424
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. TrEMBL
Match: A0A0R3U2N1 (WD_REPEATS_REGION domain-containing protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS744 PE=4 SV=2)

HSP 1 Score: 345.51 bits (885), Expect = 3.652e-111
Identity = 182/444 (40.99%), Postives = 263/444 (59.23%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFL-TCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYT-SFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIA---NSKPGTVEKQ 1356
            K+ +L R P D+LRET +DI K+ RN     HPFA +REY+RA+N +K+ RM +KPF+  L GT D + V+S +     LA FGT+DG+IQYW+ISS   + +  AH G + G+  ++    + TCG D  +  W   + +    W +   P+N+  +   P SL        I VG SE  L+Y+S   +  V   ++G   +E+ H   FNP E +I   LT  N I + D R  +   +LK+  K N+ S+NP  P+ FT  S DYNLY +D R+FK P +++ GH  +V  V YS  GREF S   D TIR+++ D + S ++Y  +RM RVL V++T D  ++LSSS+D NVRLWKA+A+EKLGP  PRE+ SL  A+ LR+K+  +P+VRKI   R +P  I     E RI++ K+ RK RN+I    + +P   EK+
Sbjct:    2 KIHMLSRKPSDYLRETADDIFKMPRNYSGNEHPFASEREYIRALNSAKLSRMMAKPFLGCLEGTTDSMTVMSLNTEKVGLAVFGTADGKIQYWDISSRKCVYETAAHAGEVRGICQYNKSQLMYTCGLDSQLKQWRMDHSAIETAWAE---PLNTTILNWTPLSLDHHPSMDAILVGASESCLLYQSTRMDVPVREWTWG---REAIHQASFNPVEHNIVGILTKDNSIVLTDTRVDQPLRKLKMNLKLNAFSWNPMEPYVFTAASEDYNLYAYDCRFFKHPKRVYIGHTNAVMAVDYSPSGREFASGSYDGTIRLWSADQTSSFDVYHTRRMKRVLQVKFTLDGHFLLSSSTDQNVRLWKAHASEKLGPMRPRERESLATAEALRDKFKEHPEVRKILKNRHVPKSIHAATKEHRIIRAKERRKLRNVIVFNHSKEPVVPEKE 439
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Cavefish
Match: dcaf13 (DDB1 and CUL4 associated factor 13 [Source:NCBI gene;Acc:103021812])

HSP 1 Score: 326.635 bits (836), Expect = 3.427e-107
Identity = 182/441 (41.27%), Postives = 259/441 (58.73%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-SHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGT----SECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVKVL RNP D++RET  DI ++ RN   TLHPF   REY RA+N +K+ER+ +KPF+ SL+G  D V  I+    + S    G  DG ++ WN+S    L   +AH+G + G+ S F G +F T G DK I  W          +  K  P+N+   + V   +     D H + GT     + V ++    S+     S+G    +SF  V++NP ET++     S   I +YD+R+S    ++ +  KSN++ +NP   ++FT  S DYNLYT+D+R   SPV++H  H  +V DV YS  G+EFVS   DKTIRIF KD   SRE+Y  KRM  V+ V+++ D+ YILS S + N+RLWKANA+EKLG  T REKA+L   Q+LR+K+  +P VR+I   R +P  I     E + +K+ Q RKE+N+  +SKPG+V
Sbjct:    2 KVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLDGHRDGVNCIAKHSKSLSTVLSGACDGEVKLWNLSKRECLRSVQAHEGFVRGICSRFCGSSFFTVGDDKTIKQWKMGPPG----YGLKEEPLNTILGKAVFTGI-----DHHQSEGTFATCGQTVDIWDELRSSPIRSFSWGV---DSFSCVRYNPVETELLASCASDRSIILYDMRESTPLKKVIMKLKSNTLCWNPMEAYYFTCSSEDYNLYTYDMRCLDSPVRVHMDHVSAVLDVDYSPTGKEFVSASFDKTIRIFPKDGGHSREVYHTKRMQHVICVKWSADNKYILSGSDEMNIRLWKANASEKLGVLTAREKAALHYNQKLRDKFQHHPQVRRIARHRHLPRGIFRQKRELKEIKEAQTRKEQNVRKHSKPGSV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Cavefish
Match: pafah1b1b (lissencephaly-1 homolog B [Source:NCBI gene;Acc:103047044])

HSP 1 Score: 55.8398 bits (133), Expect = 4.812e-8
Identity = 47/161 (29.19%), Postives = 73/161 (45.34%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D T + S S+D  VR+W A   E
Sbjct:  114 VIFHP----VFSVMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLLASCSNDQTVRVWVAATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Cavefish
Match: pafah1b1a (lissencephaly-1 homolog A-like [Source:NCBI gene;Acc:103030333])

HSP 1 Score: 52.373 bits (124), Expect = 6.355e-7
Identity = 44/161 (27.33%), Postives = 72/161 (44.72%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   +S   DKT++++        + +T  R   V  VR   D + I S S+D  VR+W     E
Sbjct:  114 VIFHP----VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCTKTFTGHREW-VRMVRPNQDGSLIASCSNDQTVRVWVVATKE 267
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Cavefish
Match: pafah1b1a (lissencephaly-1 homolog A-like [Source:NCBI gene;Acc:103030333])

HSP 1 Score: 52.373 bits (124), Expect = 6.981e-7
Identity = 44/161 (27.33%), Postives = 72/161 (44.72%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLKL-THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V+    G   +S   DKT++++        + +T  R   V  VR   D + I S S+D  VR+W     E
Sbjct:  118 VIFHP----VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCTKTFTGHREW-VRMVRPNQDGSLIASCSNDQTVRVWVVATKE 271
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Cavefish
Match: wdr59 (WD repeat domain 59 [Source:NCBI gene;Acc:103043604])

HSP 1 Score: 52.373 bits (124), Expect = 1.036e-6
Identity = 43/174 (24.71%), Postives = 83/174 (47.70%), Query Frame = 1 
Query:  613 EVYTSFGQKEKESFHYVKFNP--TETDIFCGLTSSNKINIYDIRQSEVSAQLKL---THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSP-VKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSS-DHNVRLW 1113
            E     G++ K     V++NP   E  +F   +S+ ++++Y  R     A   L   T   + + ++ F P +  T S D  +Y +D R  + P V +    G   S V ++ R +  ++   D  +RI+++    +   Y A  + ++  + +  D+ YIL++SS D++VR W
Sbjct:   28 EAPRKIGRQSKWDVGTVQWNPHRAEAHLFAA-SSNQRVDLYVWRDGCGEAHNSLQGHTRVISDLDWSWFEPEYLVTSSVDTYIYIWDTRDTRKPTVALSAVAG--ASQVKWNRRNQNCLASSHDGDVRIWDRRKPNTAVEYVAAHLSKIHGLDWHPDNEYILATSSQDNSVRFW 198
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Sea Lamprey
Match: pafah1b1b (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:NCBI gene;Acc:394247])

HSP 1 Score: 55.0694 bits (131), Expect = 1.336e-8
Identity = 51/189 (26.98%), Postives = 82/189 (43.39%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNK---INIYDIRQSEVSAQLKL-THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPD 1215
            V F+P    +F  + S+++   I ++D    +    LK  T     +SF+        +CSAD  +  +D + F+    MH GH  +VS V++   G   VS   DKT++++        + +T  R   V  VR   D + I S S+D  VR+W     E         KA L + + + E     PD
Sbjct:   53 VIFHP----VFSVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-LSGKMLASCSADMTVKLWDFQSFECLRTMH-GHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGSLIASCSNDQTVRVWVTATKEC--------KAELREHEHVVECVSWAPD 226
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Sea Lamprey
Match: taf5l (TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987])

HSP 1 Score: 50.0618 bits (118), Expect = 8.162e-7
Identity = 31/102 (30.39%), Postives = 51/102 (50.00%), Query Frame = 1 
Query:  817 FTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKAN 1122
              +CS D ++  +D R F +   ++ GH   V DV  S  G  F S   D+T R++  + +    +Y A  +  V  VR+  + +Y+ + S+D  VRLW A 
Sbjct:  358 LLSCSEDASVRFWDPRTFTN-TAVYQGHAYPVWDVDVSALGLYFCSGSHDRTARLWVPERAFPLRVY-AGHVSDVNVVRFHPNGSYVATGSADRTVRLWSAQ 457
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Sea Lamprey
Match: cstf1 (cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958])

HSP 1 Score: 49.2914 bits (116), Expect = 1.129e-6
Identity = 43/169 (25.44%), Postives = 75/169 (44.38%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSN---SMSFNPFYPFFFTTCSAD----YNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRM---MRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKL 1137
            + F+PTE  I    +    + ++D  +  V    K   ++     ++F+P   F            Y++ T +     +P   HT    +V+ V+Y+     +VSC  D TI+++  D   SR + T  R      V +V ++ +  Y+LSS  D  VRLW+ +A   L
Sbjct:  183 LAFHPTE-QILASGSRDYSLKLFDFSKPSVKRAYKSLQEAEVLRCLAFHPAGDFLLVGTRHPTLRMYDVTTCECYVSPNPADQHT---DAVTGVAYNPTANSYVSCSRDGTIKLW--DGVSSRCVATYDRAHGGAPVCSVVFSRNAKYVLSSGKDSMVRLWELSAGRAL 345
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Yeast
Match: SOF1 (Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene [Source:SGD;Acc:S000003934])

HSP 1 Score: 229.18 bits (583), Expect = 5.579e-70
Identity = 145/448 (32.37%), Postives = 232/448 (51.79%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLN-GTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGV-----------SHFDGGNF-LTCGYDKVINHW-----DFSNK--SDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYT--SFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERN 1317
            K+K + R+  D++        ++ RN    LHPF   REY +A+N +K+ERM +KPF+  L  G  D V  I+ +  + +  A G++DG I+YWN+S+  +   FKAH G+++G+                 NF L+C  DK +  W     D+SNK  SDN+    +   + +F  E+  Q + +   +   A G ++  L     V+  +  +  S+G    ++   +KFN  ETDI     S N I +YD+R +  + ++  T ++N++ +NP   F F T + D+N Y +D+R     + +   H  +V DV +S  G E V+   DK+IRI+  +   SREIY  KRM  V  V+Y+ D  YI+S S D NVRLW++ A E+   KT REK  L   ++L+E++   P++++I   R +P  IK       I      R+E N
Sbjct:    2 KIKTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQPRFHDKKPDLKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDSVTNEEGLIRTFDGESAFQGIDSHRENSTFATGGAKIHLW---DVNRLKPVSDLSWGA---DNITSLKFNQNETDILASTGSDNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWERSNVKTTREKNKLEYDEKLKERFRHMPEIKRISRHRHVPQVIKKAQEIKNIELSSIKRREAN 443
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Yeast
Match: PFS2 (Integral subunit of the pre-mRNA CPF complex; the cleavage and polyadenylation factor (CPF) complex plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex [Source:SGD;Acc:S000005261])

HSP 1 Score: 51.9878 bits (123), Expect = 1.335e-7
Identity = 56/256 (21.88%), Postives = 104/256 (40.62%), Query Frame = 1 
Query:  289 GTSDGRIQYWNIS-SDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEM-----WDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSE---CVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMS--FNPFYPFFFTTCSADYNLYTFDL-RYFKSPV-KMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIY 1017
            G +DG I+ W  + S +K  D    + I       +   F+TC  D ++  W+FSN     +     WD K                S   H +   + ++     V ++     NC    S   K K +    +F PT+ ++   ++      ++DIR S +   + +  +++ M+  ++P     FT    D +L  FDL +    P+  +   H + ++ +SY+  G  F +   D+TIR + +   I    Y
Sbjct:  153 GDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVK----------------SCDWHPEMGLIASASKDNLVKLWDPRSGNC---ISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYS-MKELMCVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFWTRARPIDPNAY 388
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Yeast
Match: TUP1 (General repressor of transcription; forms complex with Cyc8p, involved in the establishment of repressive chromatin structure through interactions with histones H3 and H4, appears to enhance expression of some genes [Source:SGD;Acc:S000000680])

HSP 1 Score: 51.6026 bits (122), Expect = 1.969e-7
Identity = 42/185 (22.70%), Postives = 79/185 (42.70%), Query Frame = 1 
Query:  634 QKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFD------LRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFN------KDDSISR-----EIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKL 1137
            Q  ++  + + + P+   +  G +    + I+D+R  + S  L +     +++ +P    +    S D  +  +D      +    S  +  TGH  SV  V ++  G+  VS  +D++++++N      K DS +      E+        VL+V  T +D YILS S D  V  W   +   L
Sbjct:  482 QGHEQDIYSLDYFPSGDKLVSG-SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 665
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Yeast
Match: LST8 (Protein required for the transport of Gap1p; required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat [Source:SGD;Acc:S000004951])

HSP 1 Score: 45.8246 bits (107), Expect = 7.777e-6
Identity = 33/145 (22.76%), Postives = 61/145 (42.07%), Query Frame = 1 
Query:  718 INIYDIRQSEVSAQLKLTHKSNSMSFNPFYPF-FFTTCSADYNLYTF------DLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAE 1131
            I I+D+ +++ + QL     ++  S +           +   N Y +      D  + K PV     H   ++ +  S+  +   +C  D T R+++ DD    E         V    ++ D  Y++++SSDH VRLW  +  E
Sbjct:  140 IRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDASHLK-PVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTRE 283
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Nematostella
Match: EDO42857 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0D5])

HSP 1 Score: 306.605 bits (784), Expect = 8.723e-100
Identity = 167/448 (37.28%), Postives = 252/448 (56.25%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISG--VSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPV 1377
            KVK+L RNP D +RE K+DIH+  RN   +LHPF   REY RA+N +K+ER+ +KPFI +L+G  D V  +S    + S+   G+ DG ++ WN+ +   L    AH G + G  V H  G +F++ G DK++  W  SN  D      K  P+ +   + +   +     D+  A    E V ++  G +      ++G    ++ H VKFNP ET I     S   I +YD+R S    +L +  +SN++++NP   + FT  + D NLYT+D+R     V +H  H  +V DV Y+  G+EFV+   DK+IRIF +D   SRE+Y  +RM RV  VR++ D  Y+LS S + N+R+WKA A++KLG   PRE+A+   + RLRE++  +P + +I+  R +P  I     E R++   + RKE N   +SKPGTV + A+  K V
Sbjct:    2 KVKILSRNPEDHIRELKSDIHRQQRNLDPSLHPFEAPREYTRALNATKLERVFAKPFIGALDGHTDGVNCLSRHPRSLSVLLSGSCDGEVKLWNLPTKDCLRTITAHKGFVRGLCVDH-TGQSFISVGDDKIVKQWSMSNALDGTT--TKLEPLQTILGKTMFHGIDHHWKDKTFAT-CGEQVDIWDEGRAEPVRSFTWGV---DTIHSVKFNPVETHILASTASDRSIVLYDMRGSTPLRKLVMEMRSNTIAWNPIEAYMFTAANEDSNLYTYDMRRLDQAVNVHMDHVSAVLDVDYAPTGQEFVTGSFDKSIRIFPRDKGHSREVYHTRRMQRVFCVRFSADSQYVLSGSDETNIRIWKAEASKKLGTLAPRERAAFTYSARLRERFKFHPQISRIRRHRHVPKAIFKAAKEKRVIMDSERRKEENRRLHSKPGTVPRVAERRKQV 442
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Nematostella
Match: EDO40174 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S816])

HSP 1 Score: 51.2174 bits (121), Expect = 4.061e-7
Identity = 44/168 (26.19%), Postives = 74/168 (44.05%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQ---LKLTHKSNSMSFNPFYP--FFFTTCSADYNLYTFDLRY----FKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKL 1137
             +F+P    I C  +  N   I D+R  + S+    L L    N +S   F        T S D N+  +D+       + P+ +  GH  SVS   ++  G   VS   D+T+ I++ D+S  ++         V   R++ D  ++LS S D  VRLW   +++ +
Sbjct:  109 CRFSPLHNRI-CSTSMDNTTKIVDVRTFDTSSNNVTLSLGGHINIVSTCCFSSDEHMLATGSWDKNIQLWDVATGVYRTQGPITLSKGHEGSVSSCHFTRDGISLVSSSYDETLVIWDVDNSC-QKFALKGHAGWVNDCRFSDDQNWVLSCSKDKTVRLWNIESSDDI 274
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Nematostella
Match: EDO35567 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SL22])

HSP 1 Score: 49.6766 bits (117), Expect = 1.395e-6
Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 1 
Query:  736 RQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFN 987
            R+S +  Q   T   N + +NP Y     +CS D ++  +D       VK HT HG +V DV +S  G + +SC  DK+ R+ +
Sbjct:   14 RKSRLKIQAH-TSGVNRLDWNPVYTNLLASCSMDNSVRVWDTYLNGICVKSHTFHGGAVKDVKWSPGGMQLLSCGYDKSSRLID 96
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Nematostella
Match: EDO39721 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9A5])

HSP 1 Score: 49.2914 bits (116), Expect = 1.657e-6
Identity = 32/113 (28.32%), Postives = 58/113 (51.33%), Query Frame = 1 
Query:  787 MSFNPFYPFFFTTCSADYNLYTFDLRY----FKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLW 1113
            ++ NP  P    + S D  L  ++L      +    K  TGH   VSDV  S+ G+  +S   DKT+R+++ +  ++   +       VL+V ++ D+  I+S + DH+++LW
Sbjct:   21 IATNPSNPDTILSSSRDKKLIVWELTRDDANYGFAKKSLTGHNHFVSDVVMSSDGQFALSGSWDKTLRLWDLNAGVTTRRFVG-HTKDVLSVAFSADNRQIVSGARDHHIKLW 132
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Nematostella
Match: EDO29288 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T426])

HSP 1 Score: 47.7506 bits (112), Expect = 3.184e-6
Identity = 33/100 (33.00%), Postives = 48/100 (48.00%), Query Frame = 1 
Query:  814 FFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLW 1113
            F  +CS D  +  + L  F + V  + GH   V DV +  RG  F S   D+T R+++ D      I+ A  +  V  V +  +  YI + SSD  VRLW
Sbjct:   35 FLLSCSEDKTIRLWSLFTFTTLVA-YRGHNYPVWDVQFCPRGHYFASTSHDRTARLWSTDHQQPLRIF-AGHVSDVNKVAFHPNCNYIATGSSDRTVRLW 132
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Medaka
Match: dcaf13 (DDB1 and CUL4 associated factor 13 [Source:NCBI gene;Acc:101160437])

HSP 1 Score: 320.857 bits (821), Expect = 5.558e-105
Identity = 174/437 (39.82%), Postives = 255/437 (58.35%), Query Frame = 1 
Query:   40 KVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISG-VSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTV 1347
            KVKVL RNP D++RETK DI ++ RN   TLHPF   REY RA+N +K+ER+ +KPF+ SL+G  D V  ++    + S    G+ DG ++ WN+S    +   +AH+G + G V  F G +F T G DK I  W    K +   + ++  P+++   + V   L     +   A    +  +  +   S    +T +G    +SF  V FNP ETD+     S   I +YD+R+S    ++ +T +SN++ +NP   ++FT  + DYNLYT+D+RY + P+ +H  H  +V DV YS  G+EFVS   DKTIRIF KD   SRE+Y  KRM  V+ ++++ D  YILS S + N+RLWKANAAEKLG   PRE+ +   +Q+L+EK+  +P +R+I   R +P  I     E R+MK  + RKE N+  +SKPG V
Sbjct:    2 KVKVLSRNPDDYVRETKLDIQRVPRNYDPTLHPFEVAREYTRALNATKLERVFAKPFLASLDGHRDGVNCLAKHTRSLSTLLSGSCDGEVKVWNLSKRECVRTLQAHEGFVRGMVVRFCGTSFFTIGDDKTIKQW----KMETPGYGEEEEPLHTILGKTVFTGLDHHQKEGVFATCGQQVDIWDEQRSSPIRSFT-WGV---DSFSSVSFNPVETDLLGSCASDRSIVLYDMRESAPLKKVIMTMRSNTLCWNPMEAYYFTCANEDYNLYTYDMRYLEKPLVVHMDHVSAVLDVDYSPTGQEFVSASFDKTIRIFPKDAGHSREVYHTKRMQHVICIKWSADSKYILSGSDEMNIRLWKANAAEKLGVLAPREREAANYSQKLKEKFQNHPQIRRIARHRHLPKSIYHQTKELRVMKDARRRKEMNVRKHSKPGAV 430
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Medaka
Match: katnb1 (katanin regulatory subunit B1 [Source:NCBI gene;Acc:101167102])

HSP 1 Score: 57.7658 bits (138), Expect = 1.950e-8
Identity = 51/190 (26.84%), Postives = 97/190 (51.05%), Query Frame = 1 
Query:  556 IAVGTSEC-VLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSN--SMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSS-SSDHNVRLW 1113
            +A G  +C V ++    +NC + +  G K   +   ++F+ +E  +  G + S  I ++D+  +++  Q  + HK++  S+ F+P Y  F  + S D N+  +D+R  K  V    GH  +V  +++S  G+   S   D T++++  D S  + I   K     + +   + + Y+L+S SSD +VRLW
Sbjct:   36 LATGGEDCRVNLWSLNKANC-IMSLTGHKT--AVECIQFSLSEEQVAAG-SQSGSIRVWDLEAAKI-LQTLMGHKASITSLGFHP-YGQFLASSSMDTNIKLWDVRR-KGYVFRFKGHTDAVRSLAFSPDGKWLASASDDCTVKLW--DLSQGKIITEFKSHSAAVNIVQFHPNEYLLASGSSDRSVRLW 216
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Medaka
Match: katnb1 (katanin regulatory subunit B1 [Source:NCBI gene;Acc:101167102])

HSP 1 Score: 57.7658 bits (138), Expect = 1.950e-8
Identity = 51/190 (26.84%), Postives = 97/190 (51.05%), Query Frame = 1 
Query:  556 IAVGTSEC-VLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSN--SMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSS-SSDHNVRLW 1113
            +A G  +C V ++    +NC + +  G K   +   ++F+ +E  +  G + S  I ++D+  +++  Q  + HK++  S+ F+P Y  F  + S D N+  +D+R  K  V    GH  +V  +++S  G+   S   D T++++  D S  + I   K     + +   + + Y+L+S SSD +VRLW
Sbjct:   36 LATGGEDCRVNLWSLNKANC-IMSLTGHKT--AVECIQFSLSEEQVAAG-SQSGSIRVWDLEAAKI-LQTLMGHKASITSLGFHP-YGQFLASSSMDTNIKLWDVRR-KGYVFRFKGHTDAVRSLAFSPDGKWLASASDDCTVKLW--DLSQGKIITEFKSHSAAVNIVQFHPNEYLLASGSSDRSVRLW 216
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Medaka
Match: PAFAH1B1 (lissencephaly-1 homolog A [Source:NCBI gene;Acc:101158788])

HSP 1 Score: 53.5286 bits (127), Expect = 2.529e-7
Identity = 49/186 (26.34%), Postives = 80/186 (43.01%), Query Frame = 1 
Query:  661 VKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLK-LTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPD 1215
            V F+P  + +    +    I ++D    +    LK  T     +SF+        +CSAD ++  +D + F+    MH GH  +VS V+    G   VS   DKTI+++        + +T  R   V  VR   D + + S S+D  VR+W  ++ E         KA L + + + E     PD
Sbjct:  114 VIFHPVFS-VMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDVSFDQTGKLL-ASCSADMSIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGSLLASCSNDQTVRVWVVSSKEC--------KAELREHEHVVECIAWAPD 287
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Medaka
Match: prpf4 (pre-mRNA processing factor 4 [Source:NCBI gene;Acc:101174721])

HSP 1 Score: 53.9138 bits (128), Expect = 2.724e-7
Identity = 74/321 (23.05%), Postives = 129/321 (40.19%), Query Frame = 1 
Query:   76 LRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKP---FIRSLNGTLDDVQVI--------STDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFL--TCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECV-LVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSE----VSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIF 984
            LR   N   +I  +  I+   F+ D + +   + S + ++ S P    IR+L G   +V  I        S D ++ +LA+   +DG ++ WN+ SD  ++D + H   +S V+    G FL  TC YD     WD   + +    +     V+          LS       +A G  +    V+      C V+     KE  S H   F+P    +  G +  N   ++++R  +    V A   L    +++ F P    F  T + D     +    + +P+K   GH   V  V  S  G+   +   D+T +++
Sbjct:  201 LRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGLCKLWSVPDCNLIRTLRGHNTNVGAIVFRPQSGVSLDQSDVNLASC-AADGTVKLWNMESDEPVADIEGHSDRVSRVAWHPSGRFLGTTC-YDNSWRLWDLEVQEEILHQEGHSKGVH---------DLSFHPDGSLVATGGLDSFGRVWDLRTGRCVVFLEGHLKEIYSLH---FSPNGHHLATG-SGDNTCKVWELRNRKCLYTVPAHQNLL---STVRFQPTDGHFLLTGAYDNTAKVWSHPGW-TPLKTLAGHEGKVMSVDVSPDGKLIATSSYDRTFKLW 502
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Planmine SMEST
Match: SMESG000049312.1 (SMESG000049312.1)

HSP 1 Score: 949.888 bits (2454), Expect = 0.000e+0
Identity = 453/454 (99.78%), Postives = 454/454 (100.00%), Query Frame = 1 
Query:   31 MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS 1392
            MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLK+THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS
Sbjct:    1 MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKMTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS 454
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Planmine SMEST
Match: SMESG000049312.1 (SMESG000049312.1)

HSP 1 Score: 858.596 bits (2217), Expect = 0.000e+0
Identity = 418/454 (92.07%), Postives = 419/454 (92.29%), Query Frame = 1 
Query:   31 MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS 1392
            MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGR                                   CGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLK+THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS
Sbjct:    1 MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGR-----------------------------------CGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKMTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS 419
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Planmine SMEST
Match: SMESG000049312.1 (SMESG000049312.1)

HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0
Identity = 407/408 (99.75%), Postives = 408/408 (100.00%), Query Frame = 1 
Query:  169 MNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS 1392
            MNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLK+THKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS
Sbjct:    1 MNVSKIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKMTHKSNSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQNRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVSDNQS 408
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Planmine SMEST
Match: SMESG000019085.1 (SMESG000019085.1)

HSP 1 Score: 61.6178 bits (148), Expect = 5.388e-10
Identity = 90/351 (25.64%), Postives = 143/351 (40.74%), Query Frame = 1 
Query:  211 IRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVS-HFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKI---------NIYDIRQSEVSAQLKLTHKSNSMSFNPFY--PFFFTTCSADYNLYTFDLR--YFKS--PVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLG-PKTPREKAS----LLDAQRLREKY 1200
            IR  +G  D V  +    +N  + + G  D   + WNIS+   L  ++ H+  I+    + +   FL+CG+D  +  WD           + P  +    I +  +  S    D  I VG+    LV    + +       GQK K         PT       +TS N+I          IYD+R   V+  + L   SN +S            T S D +L  +D+    ++S  PVK+  GH   VS   +S  G   +S   D  I I++    + +++     +  V  V+ + D+ +ILS S DH +RLW     EKL  P     KAS    + +  +  +KY
Sbjct:   25 IRVYHGHKDKVSSVHFCSSNNKIISSGF-DKTCKIWNISTGSILRTYEGHNSFINYCELNKNESKFLSCGWDSNVMIWDTETG-------QIPLTMKFGGIVSCSRFSST---DNLIVVGSDLDNLVTIVDIKS-------GQKIKSIKGLHNSTPTSCRF---ITSDNRILTTSMDRTCKIYDLRTDSVT--ITLEDHSNIVSSADISKNEHILVTGSWDKSLLVYDINSGTYRSSGPVKLIDGHEGCVSCCYFSKDGSLLISGGYDSNIVIWDMTKQV-KDLKLQGHIDWVEDVKISNDNNWILSCSKDHTIRLWNIEQTEKLSTPTLTNTKASRGVQIFECPKCGKKY 351
[Close]
BLAST of Ddb1 and cul4 associated factor 13 vs. Planmine SMEST
Match: SMESG000019085.1 (SMESG000019085.1)

HSP 1 Score: 61.2326 bits (147), Expect = 6.372e-10
Identity = 88/336 (26.19%), Postives = 137/336 (40.77%), Query Frame = 1 
Query:  211 IRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISSDLKLSDFKAHDGIISGVS-HFDGGNFLTCGYDKVINHWDFSNKSDNEMWDKKPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSFGQKEKESFHYVKFNPTETDIFCGLTSSNKI---------NIYDIRQSEVSAQLKLTHKSNSMSFNPFY--PFFFTTCSADYNLYTFDLR--YFKS--PVKMHTGHGQSVSDVSYSNRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYILSSSSDHNVRLWKANAAEKLG-PKTPREKAS 1167
            IR  +G  D V  +    +N  + + G  D   + WNIS+   L  ++ H+  I+    + +   FL+CG+D  +  WD           + P  +    I +  +  S    D  I VG+    LV    + +       GQK K         PT       +TS N+I          IYD+R   V+  + L   SN +S            T S D +L  +D+    ++S  PVK+  GH   VS   +S  G   +S   D  I I++    + +++     +  V  V+ + D+ +ILS S DH +RLW     EKL  P     KAS
Sbjct:   25 IRVYHGHKDKVSSVHFCSSNNKIISSGF-DKTCKIWNISTGSILRTYEGHNSFINYCELNKNESKFLSCGWDSNVMIWDTETG-------QIPLTMKFGGIVSCSRFSST---DNLIVVGSDLDNLVTIVDIKS-------GQKIKSIKGLHNSTPTSCRF---ITSDNRILTTSMDRTCKIYDLRTDSVT--ITLEDHSNIVSSADISKNEHILVTGSWDKSLLVYDINSGTYRSSGPVKLIDGHEGCVSCCYFSKDGSLLISGGYDSNIVIWDMTKQV-KDLKLQGHIDWVEDVKISNDNNWILSCSKDHTIRLWNIEQTEKLSTPTLTNTKAS 336
The following BLAST results are available for this feature:
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
DCAF133.161e-9838.27DDB1 and CUL4 associated factor 13 [Source:HGNC Sy... [more]
DCAF135.613e-9638.27DDB1 and CUL4 associated factor 13 [Source:HGNC Sy... [more]
DCAF135.613e-9638.27DDB1 and CUL4 associated factor 13 [Source:HGNC Sy... [more]
DCAF131.416e-3444.83DDB1 and CUL4 associated factor 13 [Source:HGNC Sy... [more]
DCAF134.409e-2931.22DDB1 and CUL4 associated factor 13 [Source:HGNC Sy... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ZK430.71.512e-8534.74pep chromosome:WBcel235:II:4422463:4424902:-1 gene... [more]
rack-15.487e-633.72Guanine nucleotide-binding protein subunit beta-2-... [more]
rack-15.487e-633.72Guanine nucleotide-binding protein subunit beta-2-... [more]
rack-15.487e-633.72Guanine nucleotide-binding protein subunit beta-2-... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CG72753.765e-9135.33gene:FBgn0036500 transcript:FBtr0075547[more]
Lis-11.971e-625.45gene:FBgn0015754 transcript:FBtr0087241[more]
Lis-11.971e-625.45gene:FBgn0015754 transcript:FBtr0304747[more]
Lis-11.971e-625.45gene:FBgn0015754 transcript:FBtr0087240[more]
Lis-11.971e-625.45gene:FBgn0015754 transcript:FBtr0087236[more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dcaf139.139e-10038.02ddb1 and cul4 associated factor 13 [Source:NCBI ge... [more]
pafah1b1a5.530e-833.96platelet-activating factor acetylhydrolase 1b, reg... [more]
pafah1b1a5.530e-833.96platelet-activating factor acetylhydrolase 1b, reg... [more]
pafah1b1b5.003e-727.95platelet-activating factor acetylhydrolase 1b, reg... [more]
pafah1b1b5.003e-727.95platelet-activating factor acetylhydrolase 1b, reg... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dcaf134.808e-9537.07DDB1 and CUL4 associated factor 13 [Source:NCBI ge... [more]
dcaf134.601e-8737.35DDB1 and CUL4 associated factor 13 [Source:NCBI ge... [more]
pafah1b12.637e-733.02platelet activating factor acetylhydrolase 1b regu... [more]
pafah1b12.755e-733.02platelet activating factor acetylhydrolase 1b regu... [more]
pafah1b12.850e-733.02platelet activating factor acetylhydrolase 1b regu... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Dcaf133.448e-9838.81DDB1 and CUL4 associated factor 13 [Source:MGI Sym... [more]
Dcaf133.448e-9838.81DDB1 and CUL4 associated factor 13 [Source:MGI Sym... [more]
Katnb12.513e-825.59katanin p80 (WD40-containing) subunit B 1 [Source:... [more]
Pafah1b11.519e-729.19platelet-activating factor acetylhydrolase, isofor... [more]
Pafah1b11.519e-729.19platelet-activating factor acetylhydrolase, isofor... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q5ZLK1|DCA13_CHICK1.132e-10138.81DDB1- and CUL4-associated factor 13 OS=Gallus gall... [more]
sp|Q5R4T8|DCA13_PONAB3.434e-9838.67DDB1- and CUL4-associated factor 13 OS=Pongo abeli... [more]
sp|Q9NV06|DCA13_HUMAN1.518e-9738.27DDB1- and CUL4-associated factor 13 OS=Homo sapien... [more]
sp|Q803X4|DCA13_DANRE1.551e-9737.80DDB1- and CUL4-associated factor 13 OS=Danio rerio... [more]
sp|Q6PAC3|DCA13_MOUSE2.412e-9738.81DDB1- and CUL4-associated factor 13 OS=Mus musculu... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
W6V1292.308e-11642.66DDB1-and CUL4-associated factor OS=Echinococcus gr... [more]
A0A0V0J5895.754e-11542.19WD_REPEATS_REGION domain-containing protein OS=Sch... [more]
A0A5J4N7M53.676e-11342.19WD repeat and SOF domain-containing protein 1 OS=P... [more]
A0A4S2LFL25.606e-11341.72Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A0R3U2N13.652e-11140.99WD_REPEATS_REGION domain-containing protein OS=Mes... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dcaf133.427e-10741.27DDB1 and CUL4 associated factor 13 [Source:NCBI ge... [more]
pafah1b1b4.812e-829.19lissencephaly-1 homolog B [Source:NCBI gene;Acc:10... [more]
pafah1b1a6.355e-727.33lissencephaly-1 homolog A-like [Source:NCBI gene;A... [more]
pafah1b1a6.981e-727.33lissencephaly-1 homolog A-like [Source:NCBI gene;A... [more]
wdr591.036e-624.71WD repeat domain 59 [Source:NCBI gene;Acc:10304360... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
pafah1b1b1.336e-826.98platelet-activating factor acetylhydrolase 1b, reg... [more]
taf5l8.162e-730.39TAF5-like RNA polymerase II, p300/CBP-associated f... [more]
cstf11.129e-625.44cleavage stimulation factor, 3' pre-RNA, subunit 1... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4
Match NameE-valueIdentityDescription
SOF15.579e-7032.37Protein required for biogenesis of 40S (small) rib... [more]
PFS21.335e-721.88Integral subunit of the pre-mRNA CPF complex; the ... [more]
TUP11.969e-722.70General repressor of transcription; forms complex ... [more]
LST87.777e-622.76Protein required for the transport of Gap1p; requi... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO428578.723e-10037.28Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO401744.061e-726.19Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO355671.395e-633.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO397211.657e-628.32Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO292883.184e-633.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dcaf135.558e-10539.82DDB1 and CUL4 associated factor 13 [Source:NCBI ge... [more]
katnb11.950e-826.84katanin regulatory subunit B1 [Source:NCBI gene;Ac... [more]
katnb11.950e-826.84katanin regulatory subunit B1 [Source:NCBI gene;Ac... [more]
PAFAH1B12.529e-726.34lissencephaly-1 homolog A [Source:NCBI gene;Acc:10... [more]
prpf42.724e-723.05pre-mRNA processing factor 4 [Source:NCBI gene;Acc... [more]
back to top
BLAST of Ddb1 and cul4 associated factor 13 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000049312.10.000e+099.78SMESG000049312.1[more]
SMESG000049312.10.000e+092.07SMESG000049312.1[more]
SMESG000049312.10.000e+099.75SMESG000049312.1[more]
SMESG000019085.15.388e-1025.64SMESG000019085.1[more]
SMESG000019085.16.372e-1026.19SMESG000019085.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032733 ID=SMED30032733|Name=Ddb1 and cul4 associated factor 13|organism=Schmidtea mediterranea sexual|type=transcript|length=1445bp
TTTTAATATTCACATTATTTTTTACAACCTATGTCTGATAAAGTTAAAGT
CTTAGTAAGAAATCCTTATGATTTTCTGAGGGAAACAAAAAATGACATTC
ATAAAATTGCTAGAAACCCAAAAATAACTCTTCATCCATTTGCCCATGAT
CGAGAATACGTTAGAGCAATGAATGTGTCTAAAATAGAGAGAATGAATAG
CAAACCTTTTATTAGATCACTTAATGGTACTCTGGATGATGTTCAAGTAA
TTAGCACTGATTGCGCAAATGCTTCTCTAGCAGCTTTTGGCACTTCAGAT
GGACGGATTCAATATTGGAATATTTCTTCAGATTTAAAACTTTCTGATTT
TAAAGCACATGACGGTATTATATCTGGTGTTTCACATTTTGATGGGGGCA
ATTTTTTAACATGTGGTTATGATAAAGTAATAAATCATTGGGATTTTTCT
AATAAATCCGACAATGAAATGTGGGATAAAAAACCGACTCCGGTGAATAG
TTTTCCCATTGAAAATGTTCCACAAAGTTTAAGTGCTCAGCTTCATGATC
AACACATTGCAGTCGGCACTAGTGAATGTGTTTTGGTTTACAAGTCAGGT
GTTTCGAATTGTGAGGTGTATACGTCTTTCGGTCAAAAGGAAAAGGAAAG
TTTTCATTATGTAAAATTCAATCCGACAGAAACGGATATTTTCTGTGGAT
TGACAAGTAGTAATAAAATCAATATATATGATATAAGACAATCAGAAGTT
TCAGCACAACTGAAATTGACACATAAAAGCAACAGTATGTCTTTCAATCC
CTTTTATCCGTTCTTTTTCACTACATGTTCTGCTGACTACAACCTGTACA
CGTTTGATTTGCGTTACTTTAAAAGTCCCGTTAAAATGCACACCGGCCAC
GGCCAATCCGTCAGTGATGTCAGCTATTCGAATCGCGGTCGGGAATTTGT
TTCCTGTTGTGTAGACAAAACGATTCGAATTTTCAATAAAGACGATTCGA
TTTCCCGGGAGATTTACACAGCGAAGCGAATGATGCGCGTTCTCACTGTG
AGATACACCTACGATGACACGTATATCCTTTCGTCTAGTTCCGATCACAA
TGTCCGACTGTGGAAGGCAAATGCTGCCGAGAAATTGGGACCGAAAACAC
CGAGAGAAAAAGCGAGCTTGTTAGACGCGCAGAGACTGAGAGAGAAATAT
GGCTGCAATCCCGATGTGAGAAAGATTCAAAACCGAAGAATCATTCCGCA
TAAGATTAAAACTCTGAATAACGAGAGTAGAATAATGAAACAGAAACAGA
ACCGAAAAGAACGCAATATAATAGCTAATTCCAAACCGGGAACGGTTGAA
AAGCAAGCGAAATTCATGAAGCCCGTTTCCGATAATCAATCATAAAATAA
ATAGTTAATTATTTGCAGTTTTTGATTCTTGAAATTTGATTGGCC
back to top

protein sequence of SMED30032733-orf-1

>SMED30032733-orf-1 ID=SMED30032733-orf-1|Name=SMED30032733-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=455bp
MSDKVKVLVRNPYDFLRETKNDIHKIARNPKITLHPFAHDREYVRAMNVS
KIERMNSKPFIRSLNGTLDDVQVISTDCANASLAAFGTSDGRIQYWNISS
DLKLSDFKAHDGIISGVSHFDGGNFLTCGYDKVINHWDFSNKSDNEMWDK
KPTPVNSFPIENVPQSLSAQLHDQHIAVGTSECVLVYKSGVSNCEVYTSF
GQKEKESFHYVKFNPTETDIFCGLTSSNKINIYDIRQSEVSAQLKLTHKS
NSMSFNPFYPFFFTTCSADYNLYTFDLRYFKSPVKMHTGHGQSVSDVSYS
NRGREFVSCCVDKTIRIFNKDDSISREIYTAKRMMRVLTVRYTYDDTYIL
SSSSDHNVRLWKANAAEKLGPKTPREKASLLDAQRLREKYGCNPDVRKIQ
NRRIIPHKIKTLNNESRIMKQKQNRKERNIIANSKPGTVEKQAKFMKPVS
DNQS*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO:0005634nucleus
GO:0005730nucleolus
GO:0005813centrosome
GO:0005829cytosol
GO:0030054cell junction
GO:0030529intracellular ribonucleoprotein complex
GO:0032040small-subunit processome
GO:0080008Cul4-RING E3 ubiquitin ligase complex
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR001680WD40_repeat
IPR007287Sof1
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
Vocabulary: biological process
TermDefinition
GO:0000462maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364rRNA processing
GO:0016567protein ubiquitination
GO:0042254ribosome biogenesis
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 409..429
NoneNo IPR availablePANTHERPTHR22851:SF0DDB1- AND CUL4-ASSOCIATED FACTOR 13coord: 4..449
NoneNo IPR availablePANTHERPTHR22851U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINcoord: 4..449
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 192..234
e-value: 290.0
score: 1.5
coord: 57..97
e-value: 23.0
score: 8.5
coord: 321..362
e-value: 0.78
score: 17.7
coord: 280..319
e-value: 6.1E-6
score: 35.7
coord: 237..276
e-value: 9.0
score: 11.0
coord: 100..138
e-value: 0.3
score: 20.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 339..362
e-value: 0.2
score: 12.6
coord: 283..319
e-value: 2.6E-4
score: 21.7
coord: 105..138
e-value: 0.031
score: 15.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 287..319
score: 8.971
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 337..371
score: 9.673
IPR007287Sof1-like proteinPFAMPF04158Sof1coord: 363..444
e-value: 3.8E-19
score: 68.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 151..388
e-value: 1.3E-26
score: 95.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 38..147
e-value: 2.9E-10
score: 41.8
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 64..371
score: 15.109
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 26..362