Rhodopsin

Overview
NameRhodopsin
Smed IDSMED30032702
Length (bp)1271
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Rhodopsin (SMED30032702) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Rhodopsin (SMED30032702) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30032702

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30032702h1SMcG0005690 dd_Smed_v4_12867_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30032702h1SMcG0005690 dd_Smed_v4_12867_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30032702h1SMcG0005690 dd_Smed_v6_12867_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
pigment cellSMED30032702h1SMcG0005690 dd_Smed_v6_12867_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Rhodopsin vs. Ensembl Human
Match: OPN4 (opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449])

HSP 1 Score: 157.532 bits (397), Expect = 1.297e-42
Identity = 111/347 (31.99%), Postives = 181/347 (52.16%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFN--NLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC-------QKKQSQT-----TQNLSTITRHV 1048
             V  P+   Y + G  IL +GL G + N  VI  F RS+ L TP+N+F+ +L  SDFL+     P    SS Y+ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  +  PL T    + +R+ + ++  W   +  S+PP  GW+ YV EGL  SCS+D    +   ++YTMLL    F L L  II CY+ IF  +R+  + ++       N  +L + +  + E K+  +   V L FVLSW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + + +PC        ++ S+      + + ST+T H 
Sbjct:   62 TVDVPDHAHYTL-GTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIRETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTP----YMSSVPAVIAKASAIHNPIIYAITHPKYR------VAIAQHLPCLGVLLGVSRRHSRPYPSYRSTHRSTLTSHT 397
[Close]
BLAST of Rhodopsin vs. Ensembl Human
Match: OPN4 (opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449])

HSP 1 Score: 149.443 bits (376), Expect = 1.310e-39
Identity = 111/358 (31.01%), Postives = 181/358 (50.56%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIR-----------SKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFN--NLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC-------QKKQSQT-----TQNLSTITRHV 1048
             V  P+   Y + G  IL +GL G + N  VI  F R           S+ L TP+N+F+ +L  SDFL+     P    SS Y+ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  +  PL T    + +R+ + ++  W   +  S+PP  GW+ YV EGL  SCS+D    +   ++YTMLL    F L L  II CY+ IF  +R+  + ++       N  +L + +  + E K+  +   V L FVLSW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + + +PC        ++ S+      + + ST+T H 
Sbjct:   62 TVDVPDHAHYTL-GTVILLVGLTGMLGNLTVIYTFCRAVLRGVTVMMQSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIRETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTP----YMSSVPAVIAKASAIHNPIIYAITHPKYR------VAIAQHLPCLGVLLGVSRRHSRPYPSYRSTHRSTLTSHT 408
[Close]
BLAST of Rhodopsin vs. Ensembl Human
Match: OPN4 (opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449])

HSP 1 Score: 149.443 bits (376), Expect = 1.733e-39
Identity = 110/354 (31.07%), Postives = 180/354 (50.85%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIR-----------SKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFN--NLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC-------QKKQSQT-----TQNLSTITRHV 1048
            P+   Y + G  IL +GL G + N  VI  F R           S+ L TP+N+F+ +L  SDFL+     P    SS Y+ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  +  PL T    + +R+ + ++  W   +  S+PP  GW+ YV EGL  SCS+D    +   ++YTMLL    F L L  II CY+ IF  +R+  + ++       N  +L + +  + E K+  +   V L FVLSW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + + +PC        ++ S+      + + ST+T H 
Sbjct:   66 PDHAHYTL-GTVILLVGLTGMLGNLTVIYTFCRAVLRGVTVMMQSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIRETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTP----YMSSVPAVIAKASAIHNPIIYAITHPKYR------VAIAQHLPCLGVLLGVSRRHSRPYPSYRSTHRSTLTSHT 408
[Close]
BLAST of Rhodopsin vs. Ensembl Human
Match: RRH (retinal pigment epithelium-derived rhodopsin homolog [Source:HGNC Symbol;Acc:HGNC:10450])

HSP 1 Score: 122.479 bits (306), Expect = 8.876e-31
Identity = 90/322 (27.95%), Postives = 153/322 (47.52%), Query Frame = 2 
Query:   53 HGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNN--LQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQS 1009
             GSV ++ E   ++I   Y++  G+   I N  V+ +FI+ K L TP+N  + +L  +D  + +IG+P    S  Y SW F  +GC VYA      GM SI +L V+AV+R+  +  P    + +T    I  ++  W  G+  ++ P++GW  Y  +    +C+ +         SYTM +I   F++ LT +  CY  +   ++          T+S N     +I  +K+   +I M       F+++W PY++V + A      +    + +  P  FAKS T  NP IY++   +F+R +      L    CQ  Q+
Sbjct:   16 DGSVFSQTE---HNIVATYLIMAGMISIISNIIVLGIFIKYKELRTPTNAIIINLAVTDIGVSSIGYPMSAASDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLP-DVGRRMTTNTYIGLILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRKNDRSFVSYTMTVIAINFIVPLTVMFYCYYHVTLSIKHHTTS---DCTESLNRDWSDQIDVTKMSVIMICM-------FLVAWSPYSIVCLWASFGDPKKIPPPMAIIAP-LFAKSSTFYNPCIYVVANKKFRRAM------LAMFKCQTHQT 316
[Close]
BLAST of Rhodopsin vs. Ensembl Human
Match: RHO (rhodopsin [Source:HGNC Symbol;Acc:HGNC:10012])

HSP 1 Score: 111.309 bits (277), Expect = 9.050e-27
Identity = 86/334 (25.75%), Postives = 157/334 (47.01%), Query Frame = 2 
Query:   77 EAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTM---LLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGS---VLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAV 1060
            E + + +   Y+  + + G   N   + V ++ K L TP N  + +L  +D  +   GF   + +S +  ++F  +GC +  F  ++ G  +++ L V+A+ER+  V  P+   +      +I  V   W + +  + PPL GW+RY+ EGLQ SC  D +    +  + +    + +  F + +  I  CY ++ F V++   + +          +     K E+++  M   + + F++ W PYA V       + T +GS    + + IPA+FAKS  I NPVIYI+   QF+       C+L  I C K      +  +T+++   S V
Sbjct:   33 EPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQ----------ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFY----IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRN------CMLTTICCGKNPLGDDEASATVSKTETSQV 345
[Close]
BLAST of Rhodopsin vs. Ensembl Celegans
Match: npr-2 (NeuroPeptide Receptor family [Source:UniProtKB/TrEMBL;Acc:A0A061AKJ8])

HSP 1 Score: 83.9593 bits (206), Expect = 1.886e-17
Identity = 82/362 (22.65%), Postives = 149/362 (41.16%), Query Frame = 2 
Query:   53 HGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYV--LEGLQISCSFDMFDTSWQSKSYTML-LIGTFLLILTAIIICYVKIFFKVRDQIK-EMRIVYTKS--------------------------FNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTIL---------ALCNVLTEKGSVLIVAIPAYFAKSFT-ICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTT 1018
            H  +  +P   V   + +  L I L G + N  V+ + ++ + L T  NIF+ +L  S+ L+C    P   +++ Y+ W F    C +       +   S F L  IA++R+N V  P +  + ++ + ++   +  W + V++ +P   GW   V  L GL      + +  +   K YT L LI  FL     +  CY  IF ++R +++ +++ +  +S                            N QR+     +R+   +   + L F  +W P+ +VT++         +     T      IV++ A+     T + NP +Y    P FK  L K L    + P      QT+
Sbjct:   16 HPDMTNEPTVLV--TFSLLYLHIFLLGILGNSAVLYLTMKHRQLQTVQNIFILNLCASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASIFVSTFSLSAIALDRYNLVVRPHK--QKLSSRSAMMIALLIWVISVVVCMP--YGWYMDVEKLNGLCGEYCSEHWPLAEVRKGYTFLVLITQFLFPFATMAFCYYNIFSRLRQRVETKLKKLSERSQLLENSTTCGTTNHIVSINAEAVQNGLENKQRLAVLAQQRRTTTILSCMVLLFAFTWLPHNVVTLMIEYDGFFFHSDETSATSTDHTYIVSMTAHLISMLTNVTNPFLYAWLNPMFKEMLIKTLRGGSKSPKPADIKQTS 371
[Close]
BLAST of Rhodopsin vs. Ensembl Celegans
Match: npr-2 (NeuroPeptide Receptor family [Source:UniProtKB/TrEMBL;Acc:A0A061AKJ8])

HSP 1 Score: 83.5741 bits (205), Expect = 2.696e-17
Identity = 82/362 (22.65%), Postives = 149/362 (41.16%), Query Frame = 2 
Query:   53 HGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYV--LEGLQISCSFDMFDTSWQSKSYTML-LIGTFLLILTAIIICYVKIFFKVRDQIK-EMRIVYTKS--------------------------FNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTIL---------ALCNVLTEKGSVLIVAIPAYFAKSFT-ICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTT 1018
            H  +  +P   V   + +  L I L G + N  V+ + ++ + L T  NIF+ +L  S+ L+C    P   +++ Y+ W F    C +       +   S F L  IA++R+N V  P +  + ++ + ++   +  W + V++ +P   GW   V  L GL      + +  +   K YT L LI  FL     +  CY  IF ++R +++ +++ +  +S                            N QR+     +R+   +   + L F  +W P+ +VT++         +     T      IV++ A+     T + NP +Y    P FK  L K L    + P      QT+
Sbjct:   41 HPDMTNEPTVLV--TFSLLYLHIFLLGILGNSAVLYLTMKHRQLQTVQNIFILNLCASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASIFVSTFSLSAIALDRYNLVVRPHK--QKLSSRSAMMIALLIWVISVVVCMP--YGWYMDVEKLNGLCGEYCSEHWPLAEVRKGYTFLVLITQFLFPFATMAFCYYNIFSRLRQRVETKLKKLSERSQLLENSTTCGTTNHIVSINAEAVQNGLENKQRLAVLAQQRRTTTILSCMVLLFAFTWLPHNVVTLMIEYDGFFFHSDETSATSTDHTYIVSMTAHLISMLTNVTNPFLYAWLNPMFKEMLIKTLRGGSKSPKPADIKQTS 396
[Close]
BLAST of Rhodopsin vs. Ensembl Celegans
Match: npr-2 (NeuroPeptide Receptor family [Source:UniProtKB/TrEMBL;Acc:A0A061AKJ8])

HSP 1 Score: 83.1889 bits (204), Expect = 3.541e-17
Identity = 82/362 (22.65%), Postives = 149/362 (41.16%), Query Frame = 2 
Query:   53 HGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYV--LEGLQISCSFDMFDTSWQSKSYTML-LIGTFLLILTAIIICYVKIFFKVRDQIK-EMRIVYTKS--------------------------FNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTIL---------ALCNVLTEKGSVLIVAIPAYFAKSFT-ICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTT 1018
            H  +  +P   V   + +  L I L G + N  V+ + ++ + L T  NIF+ +L  S+ L+C    P   +++ Y+ W F    C +       +   S F L  IA++R+N V  P +  + ++ + ++   +  W + V++ +P   GW   V  L GL      + +  +   K YT L LI  FL     +  CY  IF ++R +++ +++ +  +S                            N QR+     +R+   +   + L F  +W P+ +VT++         +     T      IV++ A+     T + NP +Y    P FK  L K L    + P      QT+
Sbjct:   59 HPDMTNEPTVLV--TFSLLYLHIFLLGILGNSAVLYLTMKHRQLQTVQNIFILNLCASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASIFVSTFSLSAIALDRYNLVVRPHK--QKLSSRSAMMIALLIWVISVVVCMP--YGWYMDVEKLNGLCGEYCSEHWPLAEVRKGYTFLVLITQFLFPFATMAFCYYNIFSRLRQRVETKLKKLSERSQLLENSTTCGTTNHIVSINAEAVQNGLENKQRLAVLAQQRRTTTILSCMVLLFAFTWLPHNVVTLMIEYDGFFFHSDETSATSTDHTYIVSMTAHLISMLTNVTNPFLYAWLNPMFKEMLIKTLRGGSKSPKPADIKQTS 414
[Close]
BLAST of Rhodopsin vs. Ensembl Celegans
Match: npr-5 (NeuroPeptide Receptor family [Source:UniProtKB/TrEMBL;Acc:Q6F3C9])

HSP 1 Score: 77.0258 bits (188), Expect = 4.466e-15
Identity = 81/374 (21.66%), Postives = 163/374 (43.58%), Query Frame = 2 
Query:   95 IYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNR-----YVLEGLQISCSFDMFDTSWQSKSY-----TMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTE--KGSVLIVAIPAY-FAKSFTICNPVIYI-LNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENLRGNRNSISETLIKMDCE 1174
            +YG ++  +G+FG   NG V+    R+K L +  N+F+ +L+ +D ++     P     +  + W F    C++   S S +   + + L  I++++F  +  P  T + V++++++      W +  +I++P L+ +       YV  G    C     + +WQS++      T +++  F++ +  I  CY KI  KV   +      + +S    QR   +  ++K+ Y+   + + F+  W P  ++ ++       E  K      AI A+  A S  + NP+++  L   Q +  L K+L              +T+ +S+    V              N+IR S     R N + + +  + +DCE
Sbjct:   61 LYG-FLFVLGIFG---NGGVLWAVARNKRLQSARNVFLLNLIFTDLILVFTAIPVTPWYAMTKDWAFGSVMCHLVPLSNSCSVFVTSWSLTAISLDKFLHINDP--TKQPVSIRQALAITFLIWIVSTLINLPYLMSFEHVDGSFYVQPGETPYCGHFCDEANWQSENSRKIYGTTVMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQFCQSLTQKQRSDATSRKKKVNYILIAMVVTFIGCWLPLTLLNLVKDFKKEPEWLKRQPFFWAINAHVIAMSLVVWNPLLFFWLTRKQKRSGLSKIL-------------NSTEIVSSFASRVS-------------NSIRRSTFR--RNNIDRVRKKQVVLDCE 400
[Close]
BLAST of Rhodopsin vs. Ensembl Celegans
Match: npr-5 (NeuroPeptide Receptor family [Source:UniProtKB/TrEMBL;Acc:Q6F3C9])

HSP 1 Score: 75.0998 bits (183), Expect = 1.364e-14
Identity = 69/306 (22.55%), Postives = 141/306 (46.08%), Query Frame = 2 
Query:   95 IYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNR-----YVLEGLQISCSFDMFDTSWQSKSY-----TMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTE--KGSVLIVAIPAY-FAKSFTICNPVIYI-LNYPQFKRELYKLL 970
            +YG ++  +G+FG   NG V+    R+K L +  N+F+ +L+ +D ++     P     +  + W F    C++   S S +   + + L  I++++F  +  P  T + V++++++      W +  +I++P L+ +       YV  G    C     + +WQS++      T +++  F++ +  I  CY KI  KV   +      + +S    QR   +  ++K+ Y+   + + F+  W P  ++ ++       E  K      AI A+  A S  + NP+++  L   Q +  L K+L
Sbjct:   61 LYG-FLFVLGIFG---NGGVLWAVARNKRLQSARNVFLLNLIFTDLILVFTAIPVTPWYAMTKDWAFGSVMCHLVPLSNSCSVFVTSWSLTAISLDKFLHINDP--TKQPVSIRQALAITFLIWIVSTLINLPYLMSFEHVDGSFYVQPGETPYCGHFCDEANWQSENSRKIYGTTVMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQFCQSLTQKQRSDATSRKKKVNYILIAMVVTFIGCWLPLTLLNLVKDFKKEPEWLKRQPFFWAINAHVIAMSLVVWNPLLFFWLTRKQKRSGLSKIL 360
[Close]
BLAST of Rhodopsin vs. Ensembl Fly
Match: Rh6 (gene:FBgn0019940 transcript:FBtr0347603)

HSP 1 Score: 134.035 bits (336), Expect = 3.490e-35
Identity = 93/322 (28.88%), Postives = 154/322 (47.83%), Query Frame = 2 
Query:   77 EAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFK---RELYKLLCVLKQIPCQKKQSQTTQNLS 1030
            E   + I G  I  +G      N  V+ +F  SK L TPSN+FV +L  SDF++    FP ++L+ FY +WI     C +Y    S+ G  SI+ + +IA +R+  +   +   K +T   ++  ++  WT+    ++ PL GWNRYV EG   +C  D F   W ++SY ++  +  +L  L  II         +R+Q K+M +    S  N +  K   +E KL  +       +  +W PY ++    +   +    S L     + FAK+  +CNP++Y L++P++K   RE    L   K       ++Q T  +S
Sbjct:   43 EPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMAR-KPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFAVAAHEKAMREQAKKMNVA---SLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIFESM--HLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGKDDLTSDSRTQATAEIS 358
[Close]
BLAST of Rhodopsin vs. Ensembl Fly
Match: Rh2 (gene:FBgn0003248 transcript:FBtr0083697)

HSP 1 Score: 127.102 bits (318), Expect = 1.969e-32
Identity = 88/346 (25.43%), Postives = 170/346 (49.13%), Query Frame = 2 
Query:   29 EMKNLTMFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFF---------KVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK--LLCVLKQIPCQKKQSQTTQNLST 1033
            +M +L   + S     +  +  I G++ L I +  C  NG V+ +F  +K L TP+N+ V +L  SDF +     P ++++ +Y++W+     C +YA   S+ G  SI+ + +IA +R+N +   +     +T+K SI  ++  W + V  ++ PL+GW+ YV EG   +CS D     W  +SY ++    F+      +ICY   F           +R+Q K+M +   +S  +  +  E K+ +  +     ++L+F ++W PY ++    L  +  +  + L     A FAK+  + NP++Y +++P+++  L +   +CV       K  +  +   +T
Sbjct:   37 DMAHLVNPYWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTP-MTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSY-LITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKSAEGKLAKVALT---TISLWF-MAWTPYLVICYFGLFKI--DGLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVFGNTDEPKPDAPASDTETT 374
[Close]
BLAST of Rhodopsin vs. Ensembl Fly
Match: ninaE (gene:FBgn0002940 transcript:FBtr0083857)

HSP 1 Score: 122.479 bits (306), Expect = 7.415e-31
Identity = 82/321 (25.55%), Postives = 157/321 (48.91%), Query Frame = 2 
Query:  104 VYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFF---------KVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK--LLCVLKQIPCQKKQSQTTQNLST 1033
             Y++ IG+     NG VI +F  +K L TP+N+ V +L  SDF I     P + ++ ++++W+     C +YA   S  G  SI+ + +I+++R+  +   +   + +T+  ++  +   W +  I  + P  GW+RYV EG   SC  D  +  W  +SY ++    F+  +   +ICY   F           +R+Q K+M +   +S  + ++  E K+ +  +     +TL+F ++W PY ++  + L     E  + L     A FAKS    NP++Y +++P+++  L +    CV  ++   K     +Q  ++
Sbjct:   55 AYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSY-LIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVAL---VTITLWF-MAWTPYLVINCMGLFKF--EGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDAQSQATAS 367
[Close]
BLAST of Rhodopsin vs. Ensembl Fly
Match: Rh7 (gene:FBgn0036260 transcript:FBtr0076020)

HSP 1 Score: 118.627 bits (296), Expect = 6.551e-29
Identity = 97/365 (26.58%), Postives = 170/365 (46.58%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPL--VGWNRYVLEGLQISCSFDMFDTSWQSKSYTML-LIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKE-SKVERKLIYMGFNVTLFFVLSWGPYAMVTIL---ALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLL---CVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENLRGNRN 1138
            P++  + I       I + GC+ N  VI +F   K L TP+NI V +L   DFL+  I  P  + ++  +        C +Y F   ++G  +I  L  IA++R+N V +PLQ ++  +  RS   ++  W    + ++ P   +G + YV EG   +CSFD  +    ++ +  L  +  + + LT+I+  Y  I          +++V+T S   +Q  K+ +K E+KL ++   +   + L+W PYA+V ++    L   +T  GS+    IPA F K+    +P +Y   +P+F+ E+  L     VL+++        +T   S +TR   S         T    + +   EN   N N
Sbjct:  111 PKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLML-IKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCIPLTSIVYSYFYI----------LKVVFTAS--RIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLERHITPLGSM----IPALFCKTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRV--------STTRSSYMTRSRSSFTHRLRTSTTGEGGMGDHRMENYLMNNN 450
[Close]
BLAST of Rhodopsin vs. Ensembl Fly
Match: Rh5 (gene:FBgn0014019 transcript:FBtr0342591)

HSP 1 Score: 107.842 bits (268), Expect = 1.192e-25
Identity = 83/322 (25.78%), Postives = 153/322 (47.52%), Query Frame = 2 
Query:   47 MFHGSVVTKPEAFVYDIYGVYILFI-----GLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVG-WNRYVLEGLQISCSFDMFDTSWQSKSY-TMLLIGTFLLILTAIIICYVKIFFKVR-------DQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLL 970
            M H       EA +Y   G YI FI      +FG   NG VI +F  SK L TPSN+ + +L   D  +CT   P  ++++     +    GC +YA +  I+GM +      IA +R+  +  P+     ++  + +  ++  W      S+ PL   W RY  EG   +CSFD    + +++ +   + + ++++ +T I++ Y K+F  VR       +Q K+M +   KS +         VE ++      + + F+L+W PY++V ++  C    +  +  +  +P    KS +  +P +Y  ++P+++ EL + L
Sbjct:   36 MVHAHWRGFREAPIYYHAGFYIAFIVLMLSSIFG---NGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCT-NMPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPID--GRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNV---KSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIG-CFGEQQLITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELERRL 347
[Close]
BLAST of Rhodopsin vs. Ensembl Zebrafish
Match: opn4a (opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624])

HSP 1 Score: 175.637 bits (444), Expect = 1.055e-48
Identity = 105/315 (33.33%), Postives = 174/315 (55.24%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQK 1000
             V  P+   Y I G  IL +G+ G + N  VI  F RS+ L TP+N+F+ +L  +DFL+C    P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ KR++  ++  W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F + L  II CY  IF  +R   + + +I      ++++R +  K E K+  +   V L +V+SW PY+ V + A     ++  +  + ++PA  AK+  I NP+IY + +P+++      L + K IPC +
Sbjct:   67 TVDVPDHAHYTI-GAVILTVGITGMLGNFLVIYAFSRSRTLRTPANLFIINLAITDFLMCATQAPIFFTTSMHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGVLSQKRALLILLVAWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRSIRTTNEAVGKINGDNKRDSMKRFQRLKNEWKMAKIALIVILMYVISWSPYSTVALTAFAG-YSDFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYR------LAIAKYIPCLR 373
[Close]
BLAST of Rhodopsin vs. Ensembl Zebrafish
Match: opn4a (opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624])

HSP 1 Score: 175.637 bits (444), Expect = 1.209e-48
Identity = 105/315 (33.33%), Postives = 174/315 (55.24%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQK 1000
             V  P+   Y I G  IL +G+ G + N  VI  F RS+ L TP+N+F+ +L  +DFL+C    P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ KR++  ++  W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F + L  II CY  IF  +R   + + +I      ++++R +  K E K+  +   V L +V+SW PY+ V + A     ++  +  + ++PA  AK+  I NP+IY + +P+++      L + K IPC +
Sbjct:   68 TVDVPDHAHYTI-GAVILTVGITGMLGNFLVIYAFSRSRTLRTPANLFIINLAITDFLMCATQAPIFFTTSMHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGVLSQKRALLILLVAWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRSIRTTNEAVGKINGDNKRDSMKRFQRLKNEWKMAKIALIVILMYVISWSPYSTVALTAFAG-YSDFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYR------LAIAKYIPCLR 374
[Close]
BLAST of Rhodopsin vs. Ensembl Zebrafish
Match: opn4b (opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3])

HSP 1 Score: 171.4 bits (433), Expect = 3.005e-47
Identity = 103/317 (32.49%), Postives = 174/317 (54.89%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKS--FNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQ 985
            P+   Y I G  IL +G+ G + N  V+  F +S+ L TP+N+F+ +L  +DFL+C    P    +S ++ WIF   GC +YAF  ++ G+ S+  L +IAV+R+  +  PL ++  ++ KR++  +   W   +  S+PP  GW+ YV EGL  SCS+D    S   ++YTMLL    F + L  II CY  IF  +R+  + +  +  +    +++++I   K E K+  +   V L +V+SW PY+ V + A     ++LT      + ++PA  AK+  I NP+IY + +P+++  + K       LLCV ++
Sbjct:   64 PDHAHYTI-GSVILAVGITGMVGNLLVMYAFCKSRSLRTPANMFIINLAVTDFLMCVTQTPIFFTTSLHKRWIFGEKGCELYAFCGALFGICSMITLMIIAVDRYFVITRPLASIGVMSRKRALLILSAAWAYSMGWSLPPFFGWSAYVPEGLLTSCSWDYMTFSPSVRAYTMLLFTFVFFIPLFVIIYCYFFIFKAIRETNRAVGKINGEGGPRDSIKKIHRMKNEWKMAKIALIVILLYVISWSPYSCVALTAFAGYADMLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYRSAIAKYIPCLGVLLCVPRR 375
[Close]
BLAST of Rhodopsin vs. Ensembl Zebrafish
Match: opn4.1 (opsin 4.1 [Source:NCBI gene;Acc:352918])

HSP 1 Score: 158.688 bits (400), Expect = 4.219e-43
Identity = 98/310 (31.61%), Postives = 167/310 (53.87%), Query Frame = 2 
Query:   65 VTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNL-QRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQI 988
            V  P+   Y I G  IL +G+ G I N  V+ VF RS+ L T  N+F+ +L  +DFL+     P    +S ++ W+F    C +YAF  ++ G+ S+  L  IA +R  A+  PL  V  V+ +++   ++  W   +  S+PP  GW+ YV EGLQ SCS+D    +   ++YT+LL +  F + L  I  CY  IF  +R   KE+R +     + + +R++    E K+  +   V + F++SW PY++V + A     +   +  + ++PA  AK+  I NP+IY + +P+++  + + + VL+ I
Sbjct:   57 VDVPDHAHY-IIGSVILIVGITGVIGNALVVYVFCRSRTLRTAGNMFIVNLAVADFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLTAIAADRCLAITQPLALVSRVSRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYMTFTPSVRAYTILLFVFVFFIPLGIIGSCYFAIFQTIRAAGKEIRELDCGETHKVYERMQN---EWKMAKVALVVIVLFIISWSPYSVVALTATAG-YSHFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRVAIARYIPVLRPI 361
[Close]
BLAST of Rhodopsin vs. Ensembl Zebrafish
Match: opn4xb (opsin 4xb [Source:NCBI gene;Acc:563080])

HSP 1 Score: 154.836 bits (390), Expect = 1.923e-42
Identity = 96/295 (32.54%), Postives = 161/295 (54.58%), Query Frame = 2 
Query:   86 VYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALC---NVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKREL 958
            V+ I    IL IG  G   N  V+  F  +K L +  N F+ +L  SDFL+     P   ++  Y+ W+F   GC +YAF  ++ G+ S+  L  I+++R+  +  PLQT++  + +R+   ++C W   +  S+ PL+GW+ Y+ EGL  SC++D    S  +KSYTM+L    F + L+ I+ CY+ +F  VR   +++ ++ ++  ++  + +  + E KL  +   V + +VLSW PYA VT++A     +VLT     L    PA  AKS  I NP IY + + +++  L
Sbjct:   17 VHYIIAFLILIIGTLGVSGNALVMFAFYSNKKLRSLPNYFIMNLAVSDFLMAITQSPIFFINCLYKEWMFGELGCKIYAFCGALFGITSMINLLAISIDRYLVITKPLQTIQWNSKRRTGLAILCIWLYSLAWSLAPLIGWSSYIPEGLMTSCTWDYVSPSPANKSYTMMLCCFVFFIPLSIILYCYLFMFLSVRQASRDLEMLSSQK-SSFVKQQSMRSEWKLAKIAAVVIVVYVLSWAPYACVTLVAWAGHQDVLTPYSKTL----PAVLAKSSAIYNPFIYAIIHNKYRATL 306
[Close]
BLAST of Rhodopsin vs. Ensembl Xenopus
Match: ENSXETT00000039733.1 (melanopsin-B-like [Source:NCBI gene;Acc:100485437])

HSP 1 Score: 164.466 bits (415), Expect = 7.705e-45
Identity = 103/308 (33.44%), Postives = 167/308 (54.22%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKES-KVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLI---VAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLK 982
            P   +Y I G +IL IG  G I N  V+  F  +K L T  N F+ +L  SDFL+     P   LSS ++ WI    GC VYAF  ++ G+ S+  L  I+V R+  +  PLQ+++  + KR++  ++  W    + S+ PL+GW+ YV EGL+ISC++D   ++  +KSYTM+L    F + L  I  CY  +F  +R   + ++ +   S+     +  + K E K+  + F + + +VLSW PYA VT++A        G  L      +PA  AK+  I NP+IY + +P+++  ++K +  L+
Sbjct:   25 PAQVLYTI-GSFILIIGFVGIIGNLLVLYAFYSNKKLRTAPNYFIMNLAISDFLMSATQAPVCFLSSLHREWILGEIGCNVYAFCGALFGITSMMTLLAISVNRYIVITKPLQSIQWSSKKRTLQVIVLVWMYSFMWSLAPLLGWSSYVPEGLRISCTWDYVTSTTSNKSYTMMLCCCVFFIPLIIISHCYFFMFLAIRSTGRNVQKL--GSYGRQSFLTPTMKNEWKMAKIAFVIIIVYVLSWSPYACVTLIAWAG----HGKSLTPYSKTVPAVIAKASAIYNPIIYGIIHPKYRETIHKTVPCLR 325
[Close]
BLAST of Rhodopsin vs. Ensembl Xenopus
Match: mcf2l (MCF.2 cell line derived transforming sequence-like [Source:Xenbase;Acc:XB-GENE-6042031])

HSP 1 Score: 154.836 bits (390), Expect = 9.225e-42
Identity = 100/312 (32.05%), Postives = 172/312 (55.13%), Query Frame = 2 
Query:   83 FVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYT----KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V+ + G  IL +G+ G + N  VI  F RS+ L +P+N+F+ +L  +DFL+     P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIA++R+  +  PL ++  ++ KR++  +   W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL    F + L  II CY+ IF  +++  + ++ + T    +S    Q++K    E K+  +   V L +V+SW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + K IPC
Sbjct:   35 HVHYVVGAVILAVGITGMLGNFLVIYAFCRSRSLRSPANMFIINLAITDFLMSVTQAPVFFATSLHKRWIFGEKGCELYAFCGALFGITSMITLMVIALDRYFVITRPLTSIGVMSKKRAVLILSGVWLYSLAWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFCFVFFIPLFIIIYCYIFIFKAIKNTNRAVQKIGTDDNKESHKQYQKMKN---EWKMAKIALIVILLYVVSWSPYSTVALVAFAGYASVLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYR------MAIAKYIPC 333
[Close]
BLAST of Rhodopsin vs. Ensembl Xenopus
Match: mcf2l (MCF.2 cell line derived transforming sequence-like [Source:Xenbase;Acc:XB-GENE-6042031])

HSP 1 Score: 154.836 bits (390), Expect = 1.387e-41
Identity = 100/312 (32.05%), Postives = 172/312 (55.13%), Query Frame = 2 
Query:   83 FVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYT----KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V+ + G  IL +G+ G + N  VI  F RS+ L +P+N+F+ +L  +DFL+     P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIA++R+  +  PL ++  ++ KR++  +   W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL    F + L  II CY+ IF  +++  + ++ + T    +S    Q++K    E K+  +   V L +V+SW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + K IPC
Sbjct:   67 HVHYVVGAVILAVGITGMLGNFLVIYAFCRSRSLRSPANMFIINLAITDFLMSVTQAPVFFATSLHKRWIFGEKGCELYAFCGALFGITSMITLMVIALDRYFVITRPLTSIGVMSKKRAVLILSGVWLYSLAWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFCFVFFIPLFIIIYCYIFIFKAIKNTNRAVQKIGTDDNKESHKQYQKMKN---EWKMAKIALIVILLYVVSWSPYSTVALVAFAGYASVLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYR------MAIAKYIPC 365
[Close]
BLAST of Rhodopsin vs. Ensembl Xenopus
Match: mcf2l (MCF.2 cell line derived transforming sequence-like [Source:Xenbase;Acc:XB-GENE-6042031])

HSP 1 Score: 154.836 bits (390), Expect = 1.417e-41
Identity = 100/312 (32.05%), Postives = 172/312 (55.13%), Query Frame = 2 
Query:   83 FVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYT----KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V+ + G  IL +G+ G + N  VI  F RS+ L +P+N+F+ +L  +DFL+     P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIA++R+  +  PL ++  ++ KR++  +   W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL    F + L  II CY+ IF  +++  + ++ + T    +S    Q++K    E K+  +   V L +V+SW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + K IPC
Sbjct:   61 HVHYVVGAVILAVGITGMLGNFLVIYAFCRSRSLRSPANMFIINLAITDFLMSVTQAPVFFATSLHKRWIFGEKGCELYAFCGALFGITSMITLMVIALDRYFVITRPLTSIGVMSKKRAVLILSGVWLYSLAWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFCFVFFIPLFIIIYCYIFIFKAIKNTNRAVQKIGTDDNKESHKQYQKMKN---EWKMAKIALIVILLYVVSWSPYSTVALVAFAGYASVLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYR------MAIAKYIPC 359
[Close]
BLAST of Rhodopsin vs. Ensembl Xenopus
Match: mcf2l (MCF.2 cell line derived transforming sequence-like [Source:Xenbase;Acc:XB-GENE-6042031])

HSP 1 Score: 154.836 bits (390), Expect = 1.673e-41
Identity = 100/312 (32.05%), Postives = 172/312 (55.13%), Query Frame = 2 
Query:   83 FVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYT----KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V+ + G  IL +G+ G + N  VI  F RS+ L +P+N+F+ +L  +DFL+     P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIA++R+  +  PL ++  ++ KR++  +   W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL    F + L  II CY+ IF  +++  + ++ + T    +S    Q++K    E K+  +   V L +V+SW PY+ V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + K IPC
Sbjct:   68 HVHYVVGAVILAVGITGMLGNFLVIYAFCRSRSLRSPANMFIINLAITDFLMSVTQAPVFFATSLHKRWIFGEKGCELYAFCGALFGITSMITLMVIALDRYFVITRPLTSIGVMSKKRAVLILSGVWLYSLAWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFCFVFFIPLFIIIYCYIFIFKAIKNTNRAVQKIGTDDNKESHKQYQKMKN---EWKMAKIALIVILLYVVSWSPYSTVALVAFAGYASVLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYR------MAIAKYIPC 366
[Close]
BLAST of Rhodopsin vs. Ensembl Mouse
Match: Opn4 (opsin 4 (melanopsin) [Source:MGI Symbol;Acc:MGI:1353425])

HSP 1 Score: 156.377 bits (394), Expect = 1.878e-42
Identity = 103/315 (32.70%), Postives = 167/315 (53.02%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALC---NVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V  P+   Y + G  IL +GL G + N  VI  F R++ L TP+N+F+ +L  SDFL+     P    SS Y+ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  +  PL T+   + +R+   ++  W   +  S+PP  GW+ YV EGL  SCS+D    + Q ++YTMLL    F L L  II CY+ IF  +R+  +             ++ +  + E K+  +   V L FVLSW PY+ V ++A     ++LT      + ++PA  AK+  I NP+IY + +P+++      + + + +PC
Sbjct:   61 TVDVPDHAHYTL-GTVILLVGLTGMLGNLTVIYTFCRNRGLRTPANMFIINLAVSDFLMSVTQAPVFFASSLYKKWLFGETGCEFYAFCGAVFGITSMITLTAIAMDRYLVITRPLATIGRGSKRRTALVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMTFTPQVRAYTMLLFCFVFFLPLLIIIFCYIFIFRAIRETGRACEGCGESPLRQRRQWQRLQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTP----YMSSVPAVIAKASAIHNPIIYAITHPKYR------VAIAQHLPC 364
[Close]
BLAST of Rhodopsin vs. Ensembl Mouse
Match: Opn4 (opsin 4 (melanopsin) [Source:MGI Symbol;Acc:MGI:1353425])

HSP 1 Score: 155.992 bits (393), Expect = 5.826e-42
Identity = 103/315 (32.70%), Postives = 167/315 (53.02%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALC---NVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V  P+   Y + G  IL +GL G + N  VI  F R++ L TP+N+F+ +L  SDFL+     P    SS Y+ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  +  PL T+   + +R+   ++  W   +  S+PP  GW+ YV EGL  SCS+D    + Q ++YTMLL    F L L  II CY+ IF  +R+  +             ++ +  + E K+  +   V L FVLSW PY+ V ++A     ++LT      + ++PA  AK+  I NP+IY + +P+++      + + + +PC
Sbjct:   61 TVDVPDHAHYTL-GTVILLVGLTGMLGNLTVIYTFCRNRGLRTPANMFIINLAVSDFLMSVTQAPVFFASSLYKKWLFGETGCEFYAFCGAVFGITSMITLTAIAMDRYLVITRPLATIGRGSKRRTALVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMTFTPQVRAYTMLLFCFVFFLPLLIIIFCYIFIFRAIRETGRACEGCGESPLRQRRQWQRLQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTP----YMSSVPAVIAKASAIHNPIIYAITHPKYR------VAIAQHLPC 364
[Close]
BLAST of Rhodopsin vs. Ensembl Mouse
Match: Rho (rhodopsin [Source:MGI Symbol;Acc:MGI:97914])

HSP 1 Score: 127.102 bits (318), Expect = 1.225e-32
Identity = 89/355 (25.07%), Postives = 168/355 (47.32%), Query Frame = 2 
Query:   23 YLEMKNLTMFHGSVVTKP-----EAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTM---LLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGS---VLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPS 1054
            Y+   N+T    S   +P     E + + +   Y+  + + G   N   + V ++ K L TP N  + +L  +D  +   GF   + +S +  ++F  +GC +  F  ++ G  +++ L V+A+ER+  V  P+   +      +I  V+  W + +  + PPLVGW+RY+ EG+Q SC  D +    +  + +    + +  F + +  I  CY ++ F V++   + +          +     K E+++  M   + +FF++ W PYA V       + T +GS    + + +PA+FAKS +I NPVIYI+   QF+  +   LC  K  P     +  T + +  ++  P+
Sbjct:   10 YVPFSNVTGVVRSPFEQPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVVFTWIMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQ----------ESATTQKAEKEVTRMVIIMVIFFLICWLPYASVAFY----IFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMLNKQFRNCMLTTLCCGKN-PLGDDDASATASKTETSQVAPA 348
[Close]
BLAST of Rhodopsin vs. Ensembl Mouse
Match: Rrh (retinal pigment epithelium derived rhodopsin homolog [Source:MGI Symbol;Acc:MGI:1097709])

HSP 1 Score: 117.472 bits (293), Expect = 3.993e-29
Identity = 87/340 (25.59%), Postives = 159/340 (46.76%), Query Frame = 2 
Query:   53 HGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLI-GTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTP 1069
             GSV ++ E   + +   Y++  G+   + N  V+ +FI+ K L TP+N  + +L  +D  + +IG+P    S  + SW F  +GC +YA      GM SI +L V+A++R+  +  P    + +T    +  ++  W  G+  ++ P++GW  Y  +    +C+ +  +      SYTM++I   F++ LT +  CY  +   +R        +Y  S       ++   +  +  M   + L F+L+W PY++V + A C    +K    +  I   FAKS T  NP IY+  + +F++ +      L    CQ   +      ST+   +P +   P
Sbjct:   16 EGSVFSRTE---HSVIAAYLIVAGITSILSNVVVLGIFIKYKELRTPTNAVIINLAFTDIGVSSIGYPMSAASDLHGSWKFGHAGCQIYAGLNIFFGMVSIGLLTVVAMDRYLTISCP-DVGRRMTTNTYLSMILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRNNDTSFVSYTMMVIVVNFIVPLTVMFYCYYHVSRSLR--------LYAASDCTAHLHRDWADQADVTKMSVIMILMFLLAWSPYSIVCLWA-CFGNPKKIPPSMAIIAPLFAKSSTFYNPCIYVAAHKKFRKAM------LAMFKCQPHLA--VPEPSTLPMDMPQSSLAP 334
[Close]
BLAST of Rhodopsin vs. Ensembl Mouse
Match: Rrh (retinal pigment epithelium derived rhodopsin homolog [Source:MGI Symbol;Acc:MGI:1097709])

HSP 1 Score: 117.472 bits (293), Expect = 3.993e-29
Identity = 87/340 (25.59%), Postives = 159/340 (46.76%), Query Frame = 2 
Query:   53 HGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLI-GTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTP 1069
             GSV ++ E   + +   Y++  G+   + N  V+ +FI+ K L TP+N  + +L  +D  + +IG+P    S  + SW F  +GC +YA      GM SI +L V+A++R+  +  P    + +T    +  ++  W  G+  ++ P++GW  Y  +    +C+ +  +      SYTM++I   F++ LT +  CY  +   +R        +Y  S       ++   +  +  M   + L F+L+W PY++V + A C    +K    +  I   FAKS T  NP IY+  + +F++ +      L    CQ   +      ST+   +P +   P
Sbjct:   16 EGSVFSRTE---HSVIAAYLIVAGITSILSNVVVLGIFIKYKELRTPTNAVIINLAFTDIGVSSIGYPMSAASDLHGSWKFGHAGCQIYAGLNIFFGMVSIGLLTVVAMDRYLTISCP-DVGRRMTTNTYLSMILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRNNDTSFVSYTMMVIVVNFIVPLTVMFYCYYHVSRSLR--------LYAASDCTAHLHRDWADQADVTKMSVIMILMFLLAWSPYSIVCLWA-CFGNPKKIPPSMAIIAPLFAKSSTFYNPCIYVAAHKKFRKAM------LAMFKCQPHLA--VPEPSTLPMDMPQSSLAP 334
[Close]
BLAST of Rhodopsin vs. UniProt/SwissProt
Match: sp|O15973|OPSD1_MIZYE (Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN=SCOP1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.157e-53
Identity = 108/319 (33.86%), Postives = 181/319 (56.74%), Query Frame = 2 
Query:   95 IYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTI-GFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYT--KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK----LLCVLKQIPCQKKQSQTT 1018
            I GVYI  +GL G + N  V+ +F  +K L +PSN+FV +L  SD +   + GFP L +SSF+Q WIF    C +Y F   + G+ SI  L  I+++R+  +  PLQ  +T+T ++    ++  W L +++SIPP  GW  Y+ EG Q SC+FD    + ++++Y ++L +  FL+ L  I +CYV I   VR   ++M  +    K+ +     K ++ E ++  +   VT  F++SW PYA++ ++A     + +T     L+  +P   AKS ++ NPV+Y L++P+F++ LY+    L C  K  P +K   +T+
Sbjct:   53 IIGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMKTEDARANNKRARSELRISKIAMTVTCLFIISWSPYAIIALIAQFGPAHWITP----LVSELPMMLAKSSSMHNPVVYALSHPKFRKALYQRVPWLFCCCK--PKEKADFRTS 365
[Close]
BLAST of Rhodopsin vs. UniProt/SwissProt
Match: sp|Q5XXP2|OPN4_PHOSU (Melanopsin OS=Phodopus sungorus OX=10044 GN=OPN4 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.796e-48
Identity = 101/304 (33.22%), Postives = 164/304 (53.95%), Query Frame = 2 
Query:   95 IYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALC---NVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
            I G  IL +GL G + N  VI  F RS+ L TP+N+ + +L  SDFL+     P    SS Y+ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  +  PL T+   + +R+   ++  W   +  S+PP  GW+ YV EGL  SCS+D    + Q ++YTMLL    F L L  II CY+ IF  +R+  +     +++S    ++    + E K+  +   V L FVLSW PY+ V ++A     ++LT      + ++PA  AK+  I NP++Y + +P+++        + + +PC
Sbjct:   71 ILGTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMLIINLAVSDFLMSFTQAPVFFASSLYKKWLFGETGCEFYAFCGAVLGITSMITLTAIALDRYLVITRPLATIGMGSKRRTALVLLGIWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYVTFTPQVRAYTMLLFCFVFFLPLLVIIFCYISIFRAIRETGRACE-GWSESPQRRRQWHRLQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTP----YMSSVPAVIAKASAIHNPIVYAITHPKYR------AAIAQHLPC 363
[Close]
BLAST of Rhodopsin vs. UniProt/SwissProt
Match: sp|Q2KNE5|OPN4A_DANRE (Melanopsin-A OS=Danio rerio OX=7955 GN=opn4a PE=2 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 7.968e-48
Identity = 105/315 (33.33%), Postives = 174/315 (55.24%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQK 1000
             V  P+   Y I G  IL +G+ G + N  VI  F RS+ L TP+N+F+ +L  +DFL+C    P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ KR++  ++  W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F + L  II CY  IF  +R   + + +I      ++++R +  K E K+  +   V L +V+SW PY+ V + A     ++  +  + ++PA  AK+  I NP+IY + +P+++      L + K IPC +
Sbjct:   67 TVDVPDHAHYTI-GAVILTVGITGMLGNFLVIYAFSRSRTLRTPANLFIINLAITDFLMCATQAPIFFTTSMHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGVLSQKRALLILLVAWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRSIRTTNEAVGKINGDNKRDSMKRFQRLKNEWKMAKIALIVILMYVISWSPYSTVALTAFAG-YSDFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYR------LAIAKYIPCLR 373
[Close]
BLAST of Rhodopsin vs. UniProt/SwissProt
Match: sp|Q5YKK9|OPN4_FELCA (Melanopsin OS=Felis catus OX=9685 GN=OPN4 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.064e-47
Identity = 105/320 (32.81%), Postives = 172/320 (53.75%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYT-----KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
             V  P+   Y + G  IL +GL G + N  VI  F RS+ L TP+N+F+ +L  SDF +     P    SS ++ W+F  +GC  YAF  ++ G+ S+  L  IA++R+  + +PL T+  V+ +R+   ++  W   +  S+PP  GW+ YV EGL  SCS+D    +   ++YTMLL    F L L  I+ CY+ IF  +R+  + ++         +S    QR++    E K+  +   V L FVLSW PY++V ++A     +VLT      + ++PA  AK+  I NP+IY + +P+++      + + + +PC
Sbjct:   57 TVDVPDHAHYTL-GTVILLVGLTGILGNLMVIYTFCRSRGLRTPANMFIINLAVSDFFMSFTQAPVFFASSLHKRWLFGEAGCEFYAFCGALFGITSMITLMAIALDRYLVITHPLATIGVVSKRRAALVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPSVRAYTMLLFCFVFFLPLLVIVYCYIFIFRAIRETGQALQTFRACEGGGRSPRQRQRLQR---EWKMAKIELLVILLFVLSWAPYSIVALMAFAGYAHVLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYR------MAIAQHLPC 362
[Close]
BLAST of Rhodopsin vs. UniProt/SwissProt
Match: sp|O57422|OPN4B_XENLA (Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.498e-47
Identity = 116/373 (31.10%), Postives = 197/373 (52.82%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKES-KVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLI---VAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQS-------QTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENLRGNRNSISETL 1156
            P+  +Y I G +IL IG  G I N  V+  F R+K L T  N F+ +L  SDFL+     P   LSS ++ WI    GC VYAF  ++ G+ S+  L  I++ R+  +  PLQ+++  + KR+   ++  W   ++ S+ PL+GW+ YV EGL+ISC++D   ++  ++SYTM+L    F + L  I  CY+ +F  +R   + ++ +   S+     + +S K E K+  + F + + FVLSW PYA VT++A        G  L      +PA  AK+  I NP+IY + +P+++  ++K +  L+ +  + K+         +     + +R   S + T     T  + I + N+ N   +R S+S+T+
Sbjct:   23 PDQVLYTI-GSFILIIGSVGIIGNMLVLYAFYRNKKLRTAPNYFIINLAISDFLMSATQAPVCFLSSLHREWILGDIGCNVYAFCGALFGITSMMTLLAISINRYIVITKPLQSIQWSSKKRTSQIIVLVWMYSLMWSLAPLLGWSSYVPEGLRISCTWDYVTSTMSNRSYTMMLCCCVFFIPLIVISHCYLFMFLAIRSTGRNVQKL--GSYGRQSFLSQSMKNEWKMAKIAFVIIIVFVLSWSPYACVTLIAWAG----HGKSLTPYSKTVPAVIAKASAIYNPIIYGIIHPKYRETIHKTVPCLRFLIREPKKDIFESSVRGSIYGRQSASRKKNSFISTVSTAETVSSHIWD-NTPNGHWDRKSLSQTM 387
[Close]
BLAST of Rhodopsin vs. TrEMBL
Match: A0A5N5PR44 (Uncharacterized protein OS=Pangasianodon hypophthalmus OX=310915 GN=PHYPO_G00176680 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.219e-51
Identity = 114/367 (31.06%), Postives = 191/367 (52.04%), Query Frame = 2 
Query:   65 VTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYT-KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENLRGNRN 1138
            V  P+   Y I G  I  IG+ G + N  VI  F RS+ L TP+N+F+ +L  +DF +C    P   ++S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ KR++  + C W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F + L  II CYV IF  + +  +++R +    + + ++R  + K E K+  +   V L +V+SW PY++V + A      +  +  + ++PA  AK+  I NP+IY + +P+++  + K       LLCV ++       S  +  LST+T              T  + I  ++     GN +
Sbjct:   54 VDVPDHAHYTI-GAVIFAIGITGIVGNFLVIYAFTRSRTLRTPANMFIINLAITDFFMCATQTPIFFITSMHKKWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLSSIGMLSEKRALLVLTCAWVYSLGWSLPPFFGWSAYVPEGLMTSCTWDYMTFTPSVRAYTMLLFIFVFFIPLIVIIYCYVFIFHAIHNSNQDVRKMNRYNTRDKVKRFNKMKKEWKMAKVALIVILLYVISWSPYSIVALTAFAG-YADMLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRVAIAKYIPCLRVLLCVPQRELHSLHSSFISTRLSTVTNRASDVSGNLSQNSTGKSYISSASDSESEGNDS 418
[Close]
BLAST of Rhodopsin vs. TrEMBL
Match: A0A2D0QJ35 (melanopsin OS=Ictalurus punctatus OX=7998 GN=opn4 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 9.020e-51
Identity = 116/373 (31.10%), Postives = 198/373 (53.08%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENLRGNRNSISETLIKM 1165
            P+   Y I GV I  IG+ G + N  VI  F RS+ L TP+N+F+ +L  +DF +C    P   ++S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ KR++  + C W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F + L  I+ CYV IF  +R+  +++ ++    + + ++R  + K E K+  +   V + +V+SW PY++V + A      +  +  + ++PA  AK+  I NP+IY + +P+++  + K       LLCV ++       S  +  LST+T     A        T  + I  S S+N     +S+    I++
Sbjct:   72 PDHAHYTIGGV-IFAIGITGIMGNFLVIYAFTRSRTLRTPANMFIINLAITDFFMCATQTPIFFITSMHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLSSIGMLSEKRALLVLTCAWLYSLGWSLPPFFGWSAYVPEGLMTSCTWDYMTFTPSVRAYTMLLFISVFFIPLIIIVYCYVFIFRAIRNSNQDVTKMNRHNNRHTVKRFNKMKKEWKMAKVALIVIMLYVISWSPYSVVALTAFAG-YADMLTPYMKSVPAVIAKASAIHNPIIYAITHPKYRVAIVKYIPCLRVLLCVPQRELHSLHSSFISTRLSTVTTRASDASGNLSQSSTGKSYI-SSVSDNESEGSDSMDSATIQI 441
[Close]
BLAST of Rhodopsin vs. TrEMBL
Match: A0A210QIB3 (Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT05889 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.928e-50
Identity = 108/319 (33.86%), Postives = 181/319 (56.74%), Query Frame = 2 
Query:   95 IYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTI-GFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYT--KSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK----LLCVLKQIPCQKKQSQTT 1018
            I GVYI  +GL G + N  V+ +F  +K L +PSN+FV +L  SD +   + GFP L +SSF+Q WIF    C +Y F   + G+ SI  L  I+++R+  +  PLQ  +T+T ++    ++  W L +++SIPP  GW  Y+ EG Q SC+FD    + ++++Y ++L +  FL+ L  I +CYV I   VR   ++M  +    K+ +     K ++ E ++  +   VT  F++SW PYA++ ++A     + +T     L+  +P   AKS ++ NPV+Y L++P+F++ LY+    L C  K  P +K   +T+
Sbjct:   97 IIGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYIVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMKTEDARANNKRARSELRISKIAMTVTCLFIISWSPYAIIALIAQFGPAHWITP----LVSELPMMLAKSSSMHNPVVYALSHPKFRKALYQRVPWLFCCCK--PKEKADFRTS 409
[Close]
BLAST of Rhodopsin vs. TrEMBL
Match: A0A0F8CMZ7 (Melanopsin-A OS=Larimichthys crocea OX=215358 GN=EH28_03736 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.387e-50
Identity = 122/357 (34.17%), Postives = 191/357 (53.50%), Query Frame = 2 
Query:   20 RYLEMKNLTMFHGSVVT----KPEAFVYD----IYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQIPCQKKQSQTTQNLSTIT 1039
            R +E+  +T   GS+VT     P A V D      GV IL +G+ G + N  VI  F RS+ L TPSNIF+ +L  +DFL+C    P   ++S ++ WIF   GC VYAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ K+++  V   W   +  S+PP  GW+ YV EGL  SCS+D    +   +SYTMLL    F + L  II  Y  IF  +R  ++ + +I    S ++ +R  + K E K+  +   V L +V+SW PY+ V + A      +  +  + ++PA  AK+  I NP++Y + +P+++ EL K       LLCV  +         +T+  ST+T
Sbjct:   31 RLMELSPVTTA-GSMVTGHPFPPVADVPDHAHYTIGVVILAVGITGMLGNFLVIYAFCRSRSLRTPSNIFIINLAVTDFLMCLTQTPTFFINSMHKRWIFGKKGCEVYAFCGALFGICSMMTLMVIAVDRYVVITRPLASLGAMSRKKALGIVAAAWVYSMGWSLPPFFGWSAYVPEGLMTSCSWDYMTFTPSVRSYTMLLFTFVFFIPLAIIIFSYCCIFRAIRHTVRAITKISCEGSRDSAKRFHKMKKEWKMAKIALIVILLYVISWAPYSCVALTAFAG-YADMVTPYMHSVPAVIAKASAIYNPIVYAITHPRYRSELSKYIPYLGVLLCVAGRDRLSSSSFHSTRR-STLT 384
[Close]
BLAST of Rhodopsin vs. TrEMBL
Match: A0A3Q3AEH9 (Opsin 4b OS=Kryptolebias marmoratus OX=37003 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.710e-50
Identity = 114/340 (33.53%), Postives = 188/340 (55.29%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQIPCQKKQSQTTQNLSTITRH 1045
             V  P+   Y I GV IL +G+ G + N  VI  F RS+ L TPSNIF+ +L  +DFL+C    P   ++S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ ++++ FV   W   +  S+PP  GW+ YV EGL  SCS+D    S   +SYTMLL    F + L+ II CY  IF  +R   + + +I    + +++++ ++ + E K+  +   V L FV+SW PY+   + A     ++LT      + ++PA  AK+  I NP+IY + +P+++  + +       LLC+  +    +   Q+T+  ST+T H
Sbjct:   52 TVNVPDHAHY-IIGVVILAVGITGMLGNFLVIYAFCRSRGLRTPSNIFIINLAVTDFLMCLTQTPIFFITSMHKQWIFGKKGCELYAFCGALFGICSMMTLMVIAVDRYVVITRPLASLGAMSHRKALSFVAVAWLYSIGWSLPPFFGWSAYVPEGLMTSCSWDYMTFSPSVRSYTMLLFTFVFFIPLSVIIFCYCCIFRAIRHTTRAIAKINCGGTKDSVKKFRKMRSEWKMAKIALIVILLFVISWAPYSCTALTAFAGYADLLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYRSAISRYVPYLGMLLCITGRDRYSRSSLQSTRR-STLTSH 385
[Close]
BLAST of Rhodopsin vs. Ensembl Cavefish
Match: opn4b (opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3])

HSP 1 Score: 179.104 bits (453), Expect = 1.353e-51
Identity = 110/354 (31.07%), Postives = 190/354 (53.67%), Query Frame = 2 
Query:   65 VTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENL 1123
            V  P+   Y I G  IL IG+ G   N  V+  F +S+ L TPSN+F+ +L  +DF++C    P   ++S  + WIF   GC +YAF  ++ GM S+  L VIAV+R+  +  PL ++  ++ KR+++ ++  W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL +  F + L  II CY  IF  +R+  +  +     + N++++    K E K+  +   V L +V+SW PY+ V + A      +  +  + ++PA  AK+  I NP+IY + +P+++  L K +  L  + C  ++ + T +    TR   S V +  ++ +  N +R ++   L
Sbjct:   20 VDVPDHAHYTI-GFVILVIGITGIAGNFLVMYAFCKSRSLRTPSNMFIINLAITDFMMCITQTPIFFITSMNKRWIFGEKGCELYAFCGALFGMCSMITLMVIAVDRYFVITRPLASIGKMSHKRALFILVIAWLYTMCWSLPPFFGWSAYVPEGLMTSCTWDYMTFTPSVRAYTMLLFVFVFFIPLFVIIYCYFCIFRAIRNTTRSWQCFGCLT-NSIKKFHRMKSEWKMAKVALIVILLYVISWSPYSCVALTAFAG-YADMLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSALVKYIPCLGVLLCVPRRDRFTSSSFMSTRR--STVTSQSSETS--NNLRHTSKSRL 366
[Close]
BLAST of Rhodopsin vs. Ensembl Cavefish
Match: opn4a (opsin 4 [Source:NCBI gene;Acc:103023553])

HSP 1 Score: 177.948 bits (450), Expect = 9.997e-50
Identity = 111/337 (32.94%), Postives = 186/337 (55.19%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC-QKKQSQTTQNLSTITRHVPSAVQT 1066
            P+   Y I G  IL IG+ G + N  VI  F RS+ L TP+N+F+ +L  +DFL+C    P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIAV+R+  +  PL ++  ++ KR++  + C W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F + L  II CY  IF  +R   +++ +I    + + +++ +  + E K+  +   V L +V+SW PY+ V + A     ++LT      + ++PA  AK+  I NP+IY + +P+++  + K +  L+ + C  K++ Q+ Q+    TR      QT
Sbjct:   59 PDHAHYTI-GAVILAIGITGMVGNFLVIYAFSRSRTLRTPANMFIINLAITDFLMCATQSPIFFTTSMHKRWIFGEKGCELYAFCGALFGICSMITLTVIAVDRYFVITRPLASIGVLSQKRALLILTCAWAYSLGWSLPPFFGWSAYVPEGLLTSCTWDYVTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRAIRITNQDVEKINGNNTRDTIKKFQRLRNEWKMAKVALIVILLYVISWSPYSSVALTAFAGYADMLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYRLAIAKYIPFLRVLLCVPKRELQSLQSSFMSTRRSTVTSQT 390
[Close]
BLAST of Rhodopsin vs. Ensembl Cavefish
Match: opn4.1 (melanopsin-like [Source:NCBI gene;Acc:103036973])

HSP 1 Score: 165.236 bits (417), Expect = 1.680e-45
Identity = 101/318 (31.76%), Postives = 168/318 (52.83%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNL-QRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQS 1009
             V  P+   Y I G  IL +G+ G I N  VI VF RS+ L TP NI V +L  +D  +     P   ++S ++ W+F    C +YAF   + G+ S+  L  IA +R  A+  PL  +  V+ +R+   ++  W   +  S+PP  GW+ YV EGLQ SCS+D    +   ++YT+LL I  F + L  I  CY+ IF  +R   +E++ + +   + + QR+K    E K+  +   V   FV+SW PY++V + A         +  + ++PA  AK+  I NP+IY + +P+++  + + + +L+ I C  ++ 
Sbjct:   60 TVDVPDHAHY-IIGSVILLVGVTGVIGNALVIYVFCRSRSLRTPGNILVVNLAVADLFMSLTQSPVFFVASLHRRWVFGEKACELYAFCGGLFGICSMMTLTAIAADRCLAITRPLALLGRVSRRRAGAVLVLVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYMSFTPSVRAYTILLFIFVFFIPLGIIGGCYLAIFQAIRSARREVKELDSGETHKMFQRMKS---EWKMAKVALLVISLFVISWSPYSIVALTATAG-YAHHLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRAAIARYVPILRAILCVGEKD 372
[Close]
BLAST of Rhodopsin vs. Ensembl Cavefish
Match: opn4xa (melanopsin-B-like [Source:NCBI gene;Acc:103043301])

HSP 1 Score: 157.918 bits (398), Expect = 1.052e-42
Identity = 100/328 (30.49%), Postives = 175/328 (53.35%), Query Frame = 2 
Query:   32 MKNLTMFHG--SVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTK-SFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALC---NVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
            M+ + M  G    V  P+   Y I   +++ IG  G + N  V+  F  +K L TP N F+ +L  SDFL+     P   ++  Y+ W+F  +GC +YAF  ++ G+ S+  L  I+++R+  +  PLQ ++  + +R++  ++  W   +  S+ PL+GW+ Y+ EGL  SC++D   ++  +KSYT++L    F + L  I  CY  +F  +R+  +++  + T      L + +  + E KL  + F V + +VLSW PYA VT++A     ++LT        A+PA  AK+  I NP+IY + + +++  L       ++IPC
Sbjct:    1 MEGVDMDRGFFRKVDVPDHAHY-IVAFFVVVIGAVGVMGNALVMYAFFCNKKLRTPPNYFIMNLAVSDFLMAITQSPIFFVNCMYKEWVFGETGCKMYAFCGALFGITSMINLLAISIDRYIVITKPLQAIRWTSKRRTLLSILLVWMYSLAWSLAPLLGWSSYIPEGLMTSCTWDYVTSTPANKSYTLMLCCFVFFIPLGIISYCYFFMFLAIRNTSRDVERLGTHVRKTTLIQQQSIRTEWKLAKVAFVVIIVYVLSWSPYAFVTLIAWAGYSSILTPYSK----AVPAVIAKASAIYNPIIYAIIHSKYRNTL------AEKIPC 317
[Close]
BLAST of Rhodopsin vs. Ensembl Cavefish
Match: tmtops3a (opsin-3-like [Source:NCBI gene;Acc:103022827])

HSP 1 Score: 135.961 bits (341), Expect = 8.408e-36
Identity = 102/349 (29.23%), Postives = 167/349 (47.85%), Query Frame = 2 
Query:   89 YDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTM-LLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVA--IPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQS-QTTQNLSTITRHVPSAVQTPPNQVTA*NAIRESNSENL 1123
            + +  V + FI  FGC  N  V+LVF R + LWTP N+ + ++  SD L+C  G PF   SS Y  W+   SGC  Y F+ S+ G+ S+  L V++ ER+ AV    +   T   +++   V   W   ++ ++PP +GW+ Y  EG   +CS      S  S SY + L I   +L L  ++ CY KI F ++   K            +  +   + E  ++ M   +   ++L W PY +V+++A      ++G +  VA  +P+  AKS T+ NPVIY+L    F  + Y+  C +  + C  + S QT           P++    P   +  +  RE  + +L
Sbjct:   41 HSVVAVCLGFILFFGCFNNLLVLLVFARFRSLWTPINVVLLNISASDMLVCLFGTPFSFASSLYGRWLLGQSGCEWYGFANSLFGIVSLVSLSVLSYERYMAVLRATKP-DTSDFRKAWRCVAGAWLYSLVWTLPPFLGWSSYGPEGPGTTCSVQWHQRSPSSVSYVVCLFIFCLVLPLLLMVYCYGKILFIIKGVTK------------INLLSAQRRENHILLMVLTMVSCYLLCWMPYGVVSLMA---TFGKQGLITPVASVVPSVLAKSSTVINPVIYVL----FNNQFYR--CFIAFVKCGAEPSIQTLNPPHNSKEEAPASSFCRPWSHSKLSPARECRTLSL 367
[Close]
BLAST of Rhodopsin vs. Ensembl Sea Lamprey
Match: opn4a (opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624])

HSP 1 Score: 172.94 bits (437), Expect = 6.662e-50
Identity = 106/330 (32.12%), Postives = 177/330 (53.64%), Query Frame = 2 
Query:   86 VYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESK-------VERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQI-PCQKKQSQTTQNLS-TITRH 1045
            V+   G  ++ IG  G I N  VI VF RSK L +P+NIF+ +L  +DF +     P   ++S ++ WIF   GC +YAF  ++ G+ S+  L VIA +R+  +  PL ++  ++ +R++Y     W   +  S+PP  GW+ YV EGL  SC++D    +   +SYTMLL    F + L  II CYV+IF  +++  + +     K+  +    KES+        E KL  +   V L +V+SW PY+ V ++A      +  +  + ++PA  AK+  I NP++Y + +P++++ + K +  L+ +    +K S+T    S   TRH
Sbjct:   13 VHHTIGSVVIAIGFTGIIGNFLVIYVFCRSKSLRSPANIFIINLAFADFFMSITQTPIFFVTSLHKRWIFGEKGCELYAFCGALFGIASMVTLMVIATDRYLVLTRPLASIGAMSKRRAMYITAAVWFYSLAWSLPPFFGWSAYVPEGLMTSCTWDYVTFTPAVRSYTMLLFCFVFFIPLIVIIFCYVRIFAAIKNTNRAV-----KTLGDAHDSKESQKQQQRMNAEWKLAKIALIVILLYVVSWSPYSCVALVAWAG-YADMLTPYMNSVPAIIAKASAIHNPIVYAITHPKYRQAIGKYVPCLRSLFGVVRKGSRTLSGSSFQSTRH 336
[Close]
BLAST of Rhodopsin vs. Ensembl Sea Lamprey
Match: qrfpr4 (pyroglutamylated RFamide peptide receptor 4 [Source:ZFIN;Acc:ZDB-GENE-091204-354])

HSP 1 Score: 100.523 bits (249), Expect = 7.832e-24
Identity = 79/324 (24.38%), Postives = 143/324 (44.14%), Query Frame = 2 
Query:   71 KPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY-----TMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVER---KLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSV--------LIVAIPAYFAKSFTICNPVIYILNYPQFKRELY-KLLCVLKQIP 991
            +P    + + G  +  + L G   N  VI V  R K L T +N+FV  L  SD +I     P  ++ +F+ +WI  ++ C +  F        S+  +  IAVERF  + +PL++    T  R+   +   W +G+ ++ P        V   +    S       W    +     T LL+ TF+L L  +   Y ++  ++  + +    V+   FN LQR + +K+ R   + + M   V + F + W P+ +V      N L  KG++        + +A+   F  S ++ NP++Y      +K++L   L C++ + P
Sbjct:   42 QPLRLAFAVVGALVFTLALSG---NALVIFVVARRKALHTVANVFVCSLAVSDLMITVFCIPITLMQNFFSNWIAGVALCKLVPFIQVTAVTTSMLTMACIAVERFQGILHPLRSRSRYTTARAASMLCGVWLVGLCVAAPMFYAHTVQVTYDVLYDVSHTGCSEQWSHAEHRQAYTTTLLLVTFVLPLLTMTALYTRLAHELWVKTR----VHDAVFNALQRSEINKITRSKKRAVKMMVIVVILFAVCWAPFHVV------NSLVPKGNLEMSFDMEAITLAMVQLFGFSNSLWNPIVYAALNQNYKKQLAIALSCLMCRRP 352
[Close]
BLAST of Rhodopsin vs. Ensembl Sea Lamprey
Match: parapinopsina (parapinopsin a [Source:ZFIN;Acc:ZDB-GENE-101129-1])

HSP 1 Score: 97.4413 bits (241), Expect = 9.036e-24
Identity = 73/231 (31.60%), Postives = 105/231 (45.45%), Query Frame = 2 
Query:  341 GMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY-TMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQ-KKQSQTTQNL 1027
            GM ++  + V+AVER+  V  PL  V   T +  +  V   WT  +  S PPL GW RY  EG+  SC+ D  D+S   +SY T   I  F L +  I+ CY K+   +               + L        ERK+  M   +   F L W PYA + I A+      K S +  +IP Y AKS    NP+IYI  + QF+  + ++ C  +    + K +  T Q L
Sbjct:    1 GMTALITVCVLAVERYVVVCKPLGGVHFGT-QHGLCGVAISWTWALAWSAPPLFGWGRYHYEGVGTSCAPDWADSSPSGRSYMTTYFIFCFALPMIIILFCYTKLMIAIHK------------VSKLGLSANDTAERKVGIMVVVMVFAFFLCWLPYAALAI-AVVIKPDLKVSPVTASIPVYLAKSSGAYNPIIYIFMHRQFREHISRIFCDHRNQSSRIKPEENTMQRL 217
[Close]
BLAST of Rhodopsin vs. Ensembl Sea Lamprey
Match: opn3 (opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16])

HSP 1 Score: 98.9821 bits (245), Expect = 3.613e-23
Identity = 81/322 (25.16%), Postives = 145/322 (45.03%), Query Frame = 2 
Query:  119 IGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKES-KVERKLIYMGFNVTLFFVLSWGPYAMVTILALC---NVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPP 1072
            IG+ G + N  ++ +F+  K L TP+N+ + ++  SD L+   G    ++S   + W++   GC    FS S+ G+ SI  L  ++ ER+ A     Q +      R++ +    W      +  PL+GW+RYVLE   + CS D   ++    ++ +     FL  L A ++     F ++   I + R ++    +   R+ ++ + E +   +   V   F+L W PYA++ +L      +++    SV    IP++FAKS    NP++Y+    + +  L    C   QI C              T HV     +PP
Sbjct:   16 IGVAGFLNNLLLVALFVGFKRLQTPTNLLLVNISLSDLLVSVFGNTLTLVSCVRRRWVWGNGGCVWDGFSNSLFGIVSISTLTALSYERY-ARLIKAQVLDFSWAWRAVTYT---WLYSAAWTGAPLLGWSRYVLEKHGLGCSIDWASSNPPDAAFVLFF---FLGCLAAPLLVMGFCFGRIALAITQFRYLHVAQVHTAGRMAQTLRGESRAARLALLVVATFLLCWMPYAVLALLTAAGNGDLINPATSV----IPSFFAKSSIAYNPILYVFLNKRVRPALAVTWCS-AQIDC--------------TTHVEPYPPSPP 311
[Close]
BLAST of Rhodopsin vs. Ensembl Sea Lamprey
Match: sstr1a (somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1])

HSP 1 Score: 81.2629 bits (199), Expect = 3.095e-17
Identity = 76/291 (26.12%), Postives = 128/291 (43.99%), Query Frame = 2 
Query:  110 ILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTV--KTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCV 976
            +  +GLFG   N  VI V +R   + T +NI++ +L  +D L   +  PFL  S+    W F  S C +      I    S+F L V+  +R+ AV +P++    +  +V ++I   +  W L ++I +P +V  +  V     + C+       W +          FLL + AI +CY  I       + +MR V  ++    Q+ K S  ERK+  M   V   FV  W P+ +V    L NV   +    +  +      + +  NP++Y      F+    ++LCV
Sbjct:   23 VCLVGLFG---NSMVIYVILRYAKMKTATNIYILNLAVADELF-MMSVPFLATSTALHHWPFGSSLCRLVLSVDGINMFTSVFCLTVLTFDRYVAVVHPIKAARYRRPSVAKTINAAV--WALSMVIILPIVVYADTRVNADGTVVCNLLWPRPEWSAAFVVYTFTVGFLLPVAAICLCYALI-------VAKMRAVALRA--GWQQRKRS--ERKVTLMVTMVVAVFVACWMPFYVVQ---LVNVFEGQQGATVNQLAVILGYANSCANPILYGFLSDSFRHSFQRVLCV 293
[Close]
BLAST of Rhodopsin vs. Ensembl Nematostella
Match: NVOP5 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI24])

HSP 1 Score: 103.605 bits (257), Expect = 1.632e-24
Identity = 87/340 (25.59%), Postives = 162/340 (47.65%), Query Frame = 2 
Query:   77 EAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYF-VICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSW--QSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLF---FVLSWGPYAMVTILALCNV-LTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQS-----QTTQNLSTITRHVPSAV 1060
            + F  D   +Y+  + + G + N  V++V +R         IF+  +  SDFL C +G P  + +S   +W + + GC  +AF +   G+ S+  L ++A E++  +F  +        KR     V+  W   +  ++PPL GW  Y LE   ++CS   FD+        Y ++ IG F + L  I+  Y  I     +++K    V   + N++ R+  + + R + Y    + L    ++LSW PY+++T L +  V L+++     V +P+ FAK+  + NP +Y++ +  F+++L+  L   +    ++++          N ST T H   AV
Sbjct:   33 DIFAMDGVTLYLSLVSVCGGLANLLVLVVLLRHLRSLRVPEIFILSITLSDFLSCAVGIPLAIHASIAGTWPYCLEGCKAHAFFIYTFGLVSLVHLAIMAFEKYLTIFKHMSKWGNFLSKRGASLIVVGLWVYCLFFTVPPLFGWAAYGLENGNLTCSIK-FDSRHPVDISYYVVMYIGGFFIPLGLILYSYYHI-----NKVKHRVAVRKYASNDVNRV--AHIRRNVKY-AVKLALLIGGYLLSWAPYSVITFLIVLQVELSDQA----VYVPSLFAKTSFMYNPFLYLVFFRSFRKKLFVTLTTREYRARRRRKMLLEYFPHLTNESTSTSHTAGAV 359
[Close]
BLAST of Rhodopsin vs. Ensembl Nematostella
Match: NVOP42 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWR8])

HSP 1 Score: 100.138 bits (248), Expect = 6.071e-24
Identity = 81/279 (29.03%), Postives = 136/279 (48.75%), Query Frame = 2 
Query:  110 ILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY-TMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQ 943
            ILF+  FG + N  V+LVF  SK L   +++ +  L  SD+L   +G P ++  +    W  D + C  Y  S +  G  S+  L  +A +R+ A+  P+      T KR    V   W  G++ ++ P++GW+ Y LE  +  C+    D S  +KSY  ++    FLL +T +I CY  +    R+      I    S   L+  KE+     ++++G      F+++W PYA+V++ +   +  E+ S     IP   AKS +  NP+IY+  Y +
Sbjct:   19 ILFV--FGLVANSTVLLVFAFSKSLQNTTDVLLISLSISDWLQAVLGKPVVIYGNVVGWWNADRALCVFYGLSTAALGFVSLLHLAALAFQRWLAITKPM------TYKRIYPLVGTLWAWGMLWAVFPVLGWSGYELEPGETGCAITWNDQSTTNKSYIFIIFGIFFLLPITLVIGCYAWVAKLARN------IDAAASQATLRSEKENAWTSFVMFLG------FLIAWLPYAIVSLYS--AITGERVSPEAATIPGMLAKSASCYNPLIYVFLYSR 275
[Close]
BLAST of Rhodopsin vs. Ensembl Nematostella
Match: NVOP465 (Opsin; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZI5])

HSP 1 Score: 99.3673 bits (246), Expect = 1.497e-23
Identity = 75/283 (26.50%), Postives = 136/283 (48.06%), Query Frame = 2 
Query:  107 YILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPF-LMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLI-LTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFK 949
            Y + I + G + N  V+++FI S+ L T  N+ +F +   D+L+ T+     +  ++ Y   +  ++ C  YAF+ S  G  SI  L  +AVE+  AV  P+    +   +R +  +   W   ++ ++ PL+GW+ Y  E   +SCS   + T   + SY + +   F LI +  +  C+  I+  +R+   E    +       Q    +K   K   M F + + F+ +W PYA+V++       T +   L+  +P+ FAK  +  NP+IY   Y +F+
Sbjct:   17 YYIAIFVIGFVTNTIVVIIFISSQRLHTTPNLILFSMSVCDWLMATMAKSVGIYGNARYWPTVGKVT-CDYYAFATSAIGYASILHLAALAVEKRMAVVSPM--TNSFNGRRMLVIIATLWGFAILWAVFPLIGWSSYGPEPGYVSCSITWYTTDHNNVSYIICVSVLFFLIPIVTMTFCFASIYHTIRNLSHEATARWGSDARATQETIRAKA--KTAKMAFLMVMCFLFAWTPYAVVSLWTTFGD-THRIPALLGVLPSLFAKLSSCYNPIIYFFMYTKFR 293
[Close]
BLAST of Rhodopsin vs. Ensembl Nematostella
Match: NVOP377 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SXB7])

HSP 1 Score: 96.2857 bits (238), Expect = 1.405e-22
Identity = 78/256 (30.47%), Postives = 129/256 (50.39%), Query Frame = 2 
Query:  197 NIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKT-VTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGT-FLLILTAIIICYVKIFFKVR---DQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFK 949
            +IF+  +   DFL  ++  P  + ++   SW F +SGC V+AF +   G+ SI  L  +A+E+F  +   L + +   T  ++I  V   W   ++I+IPPL GW RY LE    +CS    D      +Y  ++ G  F+L L  ++  Y +I FKV     Q K+ ++ + K    L++  +S V   L+  G      ++++W PY   TI  L  V   K S   + IP+ FAK+  + NP++Y L   +F+
Sbjct:   37 DIFLVSISTGDFLASSVAIPIALKAALSSSWPFGLSGCQVHAFLIYTLGLVSITNLAALALEKFLTIVKCLYSDEHFFTRLQAICVVAGLWVYCLLITIPPLFGWARYGLEPGNKTCSLRWDDDGPADDAYYGVMFGGYFILPLALMVFSYFRI-FKVECHDRQCKKWQLSHNKR-ALLRKHIQSAVFFLLLIAG------YLMAWTPY---TIATLSMVSGAKVSDNGLMIPSLFAKTSFVLNPILYTLVSKRFR 281
[Close]
BLAST of Rhodopsin vs. Ensembl Nematostella
Match: NVOP11 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL78])

HSP 1 Score: 92.8189 bits (229), Expect = 2.623e-21
Identity = 74/271 (27.31%), Postives = 133/271 (49.08%), Query Frame = 2 
Query:  143 NGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISG-CYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIII-CYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFK 949
            NG V+++F+ ++ L T  N+ +  +  +D+L+  +       ++   +W   + G C  Y F  +  G+ S+  L  ++VERF  V  P+   + +T  + +  V   W    + +I PLVGW+ Y  E    +CS   +     + SY + L   F  +   I+I C+  I+F VR   ++    +  S ++ Q+   +  ERK  +M F + L F+ +W PYA+V++ A    +T     L+  +PA  AK+    NP+IY   Y +F+
Sbjct:   25 NGIVLIIFLATRSLRTIPNMILLSMAWADWLMACLADAVGAYAN-ANNWPSMVGGLCVYYGFITTALGLTSMIHLTALSVERFVTVTIPM--TRPITETQMLLVVTFLWAFSFLWAIFPLVGWSSYGPEPGYAACSIAWYRQDLNNMSYILCLFMFFFFLPIVIMIACFSSIYFTVRKLTRDSMRRWGASSDSTQQTLAA--ERKTAWMSFIMVLAFLFAWVPYAVVSLYASFGGVTTIPK-LMSTLPAMLAKTSACYNPIIYFFMYSKFR 289
[Close]
BLAST of Rhodopsin vs. Ensembl Medaka
Match: opn4b (melanopsin-A-like [Source:NCBI gene;Acc:101157094])

HSP 1 Score: 177.178 bits (448), Expect = 1.093e-49
Identity = 122/377 (32.36%), Postives = 197/377 (52.25%), Query Frame = 2 
Query:   74 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEM-RIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQIPCQKKQSQTTQNLSTITRHV----PSAVQTPPNQVTA*NAIRESNSENLRGNRNSISETL 1156
            P+   Y I GV IL +G+ G + N  VI  F RS+ L TPSNIF+ +L  +DFL+C    P   ++S Y+ WIF   GC +YAF  ++ G+ S+  L VIAV+R   +  PL ++  ++ K+++ FV   W   +  S+PP  GW+ YV EGL  SCS+D    +   +SYTMLL    F + L  II CY +IF  +R   + + +I    + ++ ++  + + E K+  +   V L FV+SW PY+   + A     ++LT      + ++PA  AK+  I NP+IY + +P+++  + +       LLCV  +         +T+  ST+T       PS  QT     +  ++   S++E+   +R   S  L
Sbjct:   56 PDHAHYTI-GVVILAVGITGMVGNFLVIYAFSRSRSLRTPSNIFIINLAVTDFLMCLTQTPIFFITSMYKHWIFGKKGCELYAFCGALFGICSMMTLMVIAVDRCVVITRPLASLGAMSNKKALSFVAAAWVYSMGWSLPPFFGWSAYVPEGLMTSCSWDYMTFTPSVRSYTMLLFTFVFFIPLFIIIFCYCRIFRAIRHTTRAIAKINCEGTRDSAKKFHKMRSEWKMAKIALIVILLFVISWAPYSCAALTAFAGYADLLTP----YMNSVPAVIAKASAIHNPIIYAITHPKYRSAISRYVPYLGALLCVTGRERYSSSSIHSTRR-STLTSQSECRGPSRPQTSSQSES--DSAHFSDTEDDCSSRTPASRQL 424
[Close]
BLAST of Rhodopsin vs. Ensembl Medaka
Match: opn4a (melanopsin-A [Source:NCBI gene;Acc:101165418])

HSP 1 Score: 172.555 bits (436), Expect = 2.499e-48
Identity = 117/343 (34.11%), Postives = 178/343 (51.90%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLL-IGTFLLILTAIIICYVKIFFKVRDQIKEMRIV------YTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILAL---CNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYK-------LLCVLKQIPCQKKQSQTTQNLSTIT 1039
             V  P+   Y I G  IL IG+ G I N  VI  F RS+ L TP+N+F+ +L  +D L+C    P    +S ++ WIF   GC +YAF  ++ G+ S+  L VIA++R+  +  PL ++  ++ KR++  +   W   +  S+PP  GW+ YV EGL  SC++D    +   ++YTMLL I  F L L  II CYV IF  +R   + +  +        KSFN LQ       E K+  +   V L +V+SW PY+ V + A     ++LT      + +IPA  AK+  I NP+IY + +P+++  L K       LLC+  +       S  +   ST+T
Sbjct:   11 TVDVPDHAHYTI-GSVILAIGITGIIGNFLVIYAFSRSRSLRTPANMFIINLAITDLLMCVTQSPIFFTTSMHKRWIFGEKGCELYAFCGALFGICSMITLTVIAIDRYFVITRPLTSIGVLSRKRALLILSAAWAYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFVFFLPLFIIIYCYVFIFRAIRSTNRAVGKINGNTRDAVKSFNRLQN------EWKMAKIALIVILLYVISWSPYSTVALTAFAGYADMLTP----YMNSIPAVIAKASAIHNPIIYAITHPKYRMALAKYIPGLGVLLCIHPKDLRSASSSFVSTRRSTVT 342
[Close]
BLAST of Rhodopsin vs. Ensembl Medaka
Match: opn4.1 (opsin 4.1 [Source:NCBI gene;Acc:352918])

HSP 1 Score: 163.696 bits (413), Expect = 1.734e-45
Identity = 100/311 (32.15%), Postives = 165/311 (53.05%), Query Frame = 2 
Query:   62 VVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYT-MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNL-QRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQI 988
             V  P+   Y I G  IL +G+ G + N  VI VF RSK L +PSN+ V +L  +DFL+     P   ++S ++ W+F    C +YAF  ++ G+ S+  L  IAV+R   +  P+  +  ++ KR    ++  W   +  S+PP  GW+ YV EGLQ SCS+D    +   ++YT ML +  F L LT I  CY  IF  V+   +E+  +     N   +R++    E K+  +   V + FV+SW PY++V + A      +  +  + ++PA  AK+  I NP+IY L +P+++  + +   +L+ +
Sbjct:   21 TVDVPDHAHY-IIGCVILLVGMTGMLGNALVIYVFCRSKALRSPSNLLVVNLAAADFLMSVTQSPAFFVASLHRGWVFGEFACELYAFCGALFGITSMMTLTAIAVDRCLVITRPVALLGGMSRKRVYVAMVAVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYMTFTTSVRTYTIMLFVFVFFLPLTLIAACYWAIFRAVQQAGREVARLNCGEINKAYERLRS---EWKMAKVALGVIMLFVVSWAPYSVVALTATAG-YAQLLTPYMNSVPAVIAKASAIHNPIIYALTHPKYRIAIGRQFPLLRGV 326
[Close]
BLAST of Rhodopsin vs. Ensembl Medaka
Match: opn4xa (melanopsin-B [Source:NCBI gene;Acc:101158465])

HSP 1 Score: 158.688 bits (400), Expect = 8.160e-44
Identity = 96/308 (31.17%), Postives = 165/308 (53.57%), Query Frame = 2 
Query:   86 VYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTK-SFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVL---IVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPC 994
            V+ I   ++L IG  G   N  V+  F  +K L TP N F+ +L  SDFL+     P   ++  Y+ WIF  +GC +YAF  ++ G+ S+  L  I+++R+  +  PLQ++   + +R+ + +   W   +  S+ PL+GW+ Y+ EGL  SC++D    +  +KSYT++L    F + L  I  CY+ +F  +R   +++  + ++   + L + +  + E KL  + F V + FVLSW PYA VT++A         S+L     A+PA  AK+  I NP IY + + +++  L       +++PC
Sbjct:   17 VHYIIAFFVLVIGTVGVTGNALVMYAFSCNKKLRTPPNFFIMNLAVSDFLMAITQSPIFFINCLYKGWIFGETGCKMYAFCGALFGISSMINLLAISIDRYIVITKPLQSIAWTSARRTCFIIALVWLYSLFWSLAPLLGWSSYIPEGLMTSCTWDYVTATPSNKSYTLMLCCFVFFIPLGIISYCYLCMFLAIRHTSRDVTQLGSQVRKSTLIQQQSIRTEWKLAKIAFVVIIVFVLSWSPYACVTLIAWAGY----ASILNPYSKAVPAVIAKASAIYNPFIYAITHSKYRETL------AEKVPC 314
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BLAST of Rhodopsin vs. Ensembl Medaka
Match: opn4xb (melanopsin-A [Source:NCBI gene;Acc:101173945])

HSP 1 Score: 154.836 bits (390), Expect = 1.122e-41
Identity = 98/318 (30.82%), Postives = 172/318 (54.09%), Query Frame = 2 
Query:   53 HGSVVTK---PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIG-TFLLILTAIIICYVKIFFKVRDQIKEMRIVYTK-SFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILA---LCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLK 982
             GS+++K   P+   Y I  +++  IG  G   N  V+  F  +K L    N F+ +L  SDFL+     P   ++  Y+ W+F  +GC VYAF  ++ G+ S+  L  I+VER+  +  PLQT+   + +++   +   W   +  S+ PLVGW+ Y+ EGL  SC++D    +  ++SYTM+L    F + L  I+ CY+++F  +R   + +  + T+   + + + K  + E KL  + F V + +VLSW PYA VT+++     ++L+        A+PA  AK+ TI NP+IY + + +++  L + +  L+
Sbjct:    7 QGSLLSKVNVPDHAHY-IVAMFVFVIGALGITGNALVMFAFYSNKKLRNLPNYFIMNLAISDFLMAFTQSPIFFINCLYREWMFGETGCKVYAFCGALFGISSMINLLAISVERYLVITKPLQTIHWSSKRKTTLAIFLVWFYSLAWSLAPLVGWSSYIPEGLMTSCTWDYVTYTPANRSYTMMLCCFVFFIPLGIILYCYLRMFLSIRKTTRAVERLGTQVRKSTVIQQKTIRSEWKLAKIAFVVIVVYVLSWSPYACVTLISWAGHADILSPYSK----AVPAVIAKASTIYNPIIYAIIHNKYRMTLAEKVSCLR 319
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BLAST of Rhodopsin vs. Planmine SMEST
Match: SMESG000025307.1 (SMESG000025307.1)

HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0
Identity = 349/352 (99.15%), Postives = 351/352 (99.72%), Query Frame = 2 
Query:   32 MKNLTMFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 1087
            MKNLTMFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLC+LKQIPC+KKQSQTTQNLSTITRHVPSAVQTPPNQVTA
Sbjct:    1 MKNLTMFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCILKQIPCKKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 352
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BLAST of Rhodopsin vs. Planmine SMEST
Match: SMESG000025307.1 (SMESG000025307.1)

HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 344/347 (99.14%), Postives = 346/347 (99.71%), Query Frame = 2 
Query:   47 MFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 1087
            MFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLC+LKQIPC+KKQSQTTQNLSTITRHVPSAVQTPPNQVTA
Sbjct:    1 MFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCILKQIPCKKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 347
[Close]
BLAST of Rhodopsin vs. Planmine SMEST
Match: SMESG000025307.1 (SMESG000025307.1)

HSP 1 Score: 507.679 bits (1306), Expect = 0.000e+0
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 2 
Query:  329 MSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 1087
            MSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLC+LKQIPC+KKQSQTTQNLSTITRHVPSAVQTPPNQVTA
Sbjct:    1 MSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCILKQIPCKKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 253
[Close]
BLAST of Rhodopsin vs. Planmine SMEST
Match: SMESG000025307.1 (SMESG000025307.1)

HSP 1 Score: 498.434 bits (1282), Expect = 1.033e-178
Identity = 245/248 (98.79%), Postives = 247/248 (99.60%), Query Frame = 2 
Query:  344 MHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 1087
            MHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSY MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLC+LKQIPC+KKQSQTTQNLSTITRHVPSAVQTPPNQVTA
Sbjct:    1 MHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCILKQIPCKKKQSQTTQNLSTITRHVPSAVQTPPNQVTA 248
[Close]
BLAST of Rhodopsin vs. Planmine SMEST
Match: SMESG000025308.1 (SMESG000025308.1)

HSP 1 Score: 309.686 bits (792), Expect = 5.963e-104
Identity = 148/253 (58.50%), Postives = 189/253 (74.70%), Query Frame = 2 
Query:  182 LWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYP 940
            +WTPSN+F+FDL  SD LIC +GFPFL +S F + WIF  +GC  YAFSMS+TGMHSIFIL ++AVER   +  PL+ VK V+ KRS   V+  WT  + +SIPPL+GWNRYVLEGL ISCS+DMFD SW+SKSY + LIG FL++L  II CY+ +F KV+ Q   MR++   S  +L   +E + E KLI+MG N+TL FVLSWGPYA+VTIL++  VL EK S++IV  P++FAKSFTI NP+IYI +YP
Sbjct:    1 MWTPSNVFIFDLALSDLLICILGFPFLTISGFCKEWIFSEAGCSAYAFSMSVTGMHSIFILTILAVERLKVISRPLKMVKIVSKKRSFLLVLISWTFAIFVSIPPLLGWNRYVLEGLHISCSYDMFDGSWRSKSYIVFLIGIFLVVLLIIIFCYLALFLKVQRQATSMRVMIKDS-RDLLAERERQRENKLIWMGCNITLAFVLSWGPYALVTILSIFKVLNEKNSLIIVTFPSFFAKSFTIYNPIIYIFSYP 252
The following BLAST results are available for this feature:
BLAST of Rhodopsin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
OPN41.297e-4231.99opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449][more]
OPN41.310e-3931.01opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449][more]
OPN41.733e-3931.07opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449][more]
RRH8.876e-3127.95retinal pigment epithelium-derived rhodopsin homol... [more]
RHO9.050e-2725.75rhodopsin [Source:HGNC Symbol;Acc:HGNC:10012][more]
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BLAST of Rhodopsin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
npr-21.886e-1722.65NeuroPeptide Receptor family [Source:UniProtKB/Tr... [more]
npr-22.696e-1722.65NeuroPeptide Receptor family [Source:UniProtKB/Tr... [more]
npr-23.541e-1722.65NeuroPeptide Receptor family [Source:UniProtKB/Tr... [more]
npr-54.466e-1521.66NeuroPeptide Receptor family [Source:UniProtKB/Tr... [more]
npr-51.364e-1422.55NeuroPeptide Receptor family [Source:UniProtKB/Tr... [more]
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BLAST of Rhodopsin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rh63.490e-3528.88gene:FBgn0019940 transcript:FBtr0347603[more]
Rh21.969e-3225.43gene:FBgn0003248 transcript:FBtr0083697[more]
ninaE7.415e-3125.55gene:FBgn0002940 transcript:FBtr0083857[more]
Rh76.551e-2926.58gene:FBgn0036260 transcript:FBtr0076020[more]
Rh51.192e-2525.78gene:FBgn0014019 transcript:FBtr0342591[more]
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BLAST of Rhodopsin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
opn4a1.055e-4833.33opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624... [more]
opn4a1.209e-4833.33opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624... [more]
opn4b3.005e-4732.49opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3][more]
opn4.14.219e-4331.61opsin 4.1 [Source:NCBI gene;Acc:352918][more]
opn4xb1.923e-4232.54opsin 4xb [Source:NCBI gene;Acc:563080][more]
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BLAST of Rhodopsin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSXETT00000039733.17.705e-4533.44melanopsin-B-like [Source:NCBI gene;Acc:100485437][more]
mcf2l9.225e-4232.05MCF.2 cell line derived transforming sequence-like... [more]
mcf2l1.387e-4132.05MCF.2 cell line derived transforming sequence-like... [more]
mcf2l1.417e-4132.05MCF.2 cell line derived transforming sequence-like... [more]
mcf2l1.673e-4132.05MCF.2 cell line derived transforming sequence-like... [more]
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BLAST of Rhodopsin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Opn41.878e-4232.70opsin 4 (melanopsin) [Source:MGI Symbol;Acc:MGI:13... [more]
Opn45.826e-4232.70opsin 4 (melanopsin) [Source:MGI Symbol;Acc:MGI:13... [more]
Rho1.225e-3225.07rhodopsin [Source:MGI Symbol;Acc:MGI:97914][more]
Rrh3.993e-2925.59retinal pigment epithelium derived rhodopsin homol... [more]
Rrh3.993e-2925.59retinal pigment epithelium derived rhodopsin homol... [more]
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BLAST of Rhodopsin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|O15973|OPSD1_MIZYE3.157e-5333.86Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis O... [more]
sp|Q5XXP2|OPN4_PHOSU7.796e-4833.22Melanopsin OS=Phodopus sungorus OX=10044 GN=OPN4 P... [more]
sp|Q2KNE5|OPN4A_DANRE7.968e-4833.33Melanopsin-A OS=Danio rerio OX=7955 GN=opn4a PE=2 ... [more]
sp|Q5YKK9|OPN4_FELCA1.064e-4732.81Melanopsin OS=Felis catus OX=9685 GN=OPN4 PE=2 SV=... [more]
sp|O57422|OPN4B_XENLA3.498e-4731.10Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE... [more]
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BLAST of Rhodopsin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5N5PR443.219e-5131.06Uncharacterized protein OS=Pangasianodon hypophtha... [more]
A0A2D0QJ359.020e-5131.10melanopsin OS=Ictalurus punctatus OX=7998 GN=opn4 ... [more]
A0A210QIB33.928e-5033.86Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis O... [more]
A0A0F8CMZ78.387e-5034.17Melanopsin-A OS=Larimichthys crocea OX=215358 GN=E... [more]
A0A3Q3AEH99.710e-5033.53Opsin 4b OS=Kryptolebias marmoratus OX=37003 PE=3 ... [more]
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BLAST of Rhodopsin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
opn4b1.353e-5131.07opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3][more]
opn4a9.997e-5032.94opsin 4 [Source:NCBI gene;Acc:103023553][more]
opn4.11.680e-4531.76melanopsin-like [Source:NCBI gene;Acc:103036973][more]
opn4xa1.052e-4230.49melanopsin-B-like [Source:NCBI gene;Acc:103043301][more]
tmtops3a8.408e-3629.23opsin-3-like [Source:NCBI gene;Acc:103022827][more]
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BLAST of Rhodopsin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
opn4a6.662e-5032.12opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624... [more]
qrfpr47.832e-2424.38pyroglutamylated RFamide peptide receptor 4 [Sourc... [more]
parapinopsina9.036e-2431.60parapinopsin a [Source:ZFIN;Acc:ZDB-GENE-101129-1][more]
opn33.613e-2325.16opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16][more]
sstr1a3.095e-1726.12somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE... [more]
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BLAST of Rhodopsin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Rhodopsin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
NVOP51.632e-2425.59Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
NVOP426.071e-2429.03Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
NVOP4651.497e-2326.50Opsin; Predicted protein [Source:UniProtKB/TrEMBL... [more]
NVOP3771.405e-2230.47Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
NVOP112.623e-2127.31Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Rhodopsin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
opn4b1.093e-4932.36melanopsin-A-like [Source:NCBI gene;Acc:101157094][more]
opn4a2.499e-4834.11melanopsin-A [Source:NCBI gene;Acc:101165418][more]
opn4.11.734e-4532.15opsin 4.1 [Source:NCBI gene;Acc:352918][more]
opn4xa8.160e-4431.17melanopsin-B [Source:NCBI gene;Acc:101158465][more]
opn4xb1.122e-4130.82melanopsin-A [Source:NCBI gene;Acc:101173945][more]
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BLAST of Rhodopsin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000025307.10.000e+099.15SMESG000025307.1[more]
SMESG000025307.10.000e+099.14SMESG000025307.1[more]
SMESG000025307.10.000e+098.81SMESG000025307.1[more]
SMESG000025307.11.033e-17898.79SMESG000025307.1[more]
SMESG000025308.15.963e-10458.50SMESG000025308.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032702 ID=SMED30032702|Name=Rhodopsin|organism=Schmidtea mediterranea sexual|type=transcript|length=1271bp
CTCATTTATTGTGTAATTAAGATATTTGGAAATGAAGAACCTAACAATGT
TTCACGGATCTGTTGTTACCAAACCAGAGGCATTTGTGTATGACATTTAC
GGAGTCTACATTCTTTTTATTGGATTATTCGGATGCATTGAGAACGGATG
CGTTATTCTTGTTTTTATCAGATCAAAACTTTTGTGGACTCCATCAAATA
TATTTGTTTTCGATTTGGTTTGTTCAGATTTTTTAATATGTACAATTGGA
TTCCCGTTTCTTATGCTGAGTTCATTTTATCAGAGCTGGATTTTTGATAT
TTCGGGTTGTTACGTTTATGCTTTTTCCATGTCTATTACTGGAATGCACT
CCATATTCATCCTTTTTGTAATTGCCGTTGAGCGGTTCAATGCTGTATTC
TATCCCTTACAAACTGTCAAAACTGTCACAGTTAAAAGATCTATTTATTT
TGTCATTTGCTGTTGGACGCTTGGAGTGATTATCTCCATTCCTCCTCTAG
TTGGTTGGAATCGATATGTTTTGGAAGGTCTACAGATATCTTGCAGTTTT
GATATGTTTGACACTTCATGGCAAAGCAAAAGCTACACCATGTTGCTTAT
CGGAACGTTTCTCCTGATTTTGACAGCAATTATCATCTGCTACGTAAAAA
TATTTTTCAAAGTCCGGGATCAGATAAAGGAAATGAGAATTGTCTATACA
AAATCATTCAATAATTTGCAAAGAATTAAAGAGAGCAAAGTAGAAAGAAA
ATTAATATACATGGGATTCAATGTGACATTATTCTTTGTTTTATCATGGG
GACCATATGCAATGGTCACAATTTTGGCTCTTTGTAATGTGCTGACCGAG
AAAGGCTCTGTGCTAATTGTAGCCATCCCGGCTTATTTCGCAAAATCATT
CACCATTTGTAATCCCGTCATTTACATTTTAAACTATCCGCAATTCAAAA
GAGAACTTTATAAGTTATTATGTGTTTTGAAGCAGATACCCTGTCAAAAG
AAACAAAGTCAAACAACTCAAAACCTGTCCACAATCACAAGGCATGTCCC
AAGTGCTGTACAAACACCACCAAATCAAGTAACAGCTTAGAACGCAATTC
GAGAAAGCAATTCAGAAAATCTACGAGGTAACAGAAATTCTATATCAGAA
ACTTTGATAAAAATGGATTGTGAATAAATTATTTATGTTTTCTAGTGTAA
TTTAGTTGCGATTTCACATTTTCCATTTAAATTTGTATTTTTTTGCTTTT
AAATAATAAATTCTAGTTCGA
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protein sequence of SMED30032702-orf-1

>SMED30032702-orf-1 ID=SMED30032702-orf-1|Name=SMED30032702-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=353bp
MKNLTMFHGSVVTKPEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKL
LWTPSNIFVFDLVCSDFLICTIGFPFLMLSSFYQSWIFDISGCYVYAFSM
SITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVI
ISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYTMLLIGTFLLILTAI
IICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTL
FFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYIL
NYPQFKRELYKLLCVLKQIPCQKKQSQTTQNLSTITRHVPSAVQTPPNQV
TA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0001750photoreceptor outer segment
GO:0042995cell projection
GO:0097381photoreceptor disc membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: molecular function
TermDefinition
GO:000550211-cis retinal binding
GO:0004930G-protein coupled receptor activity
GO:0004871signal transducer activity
GO:0008020G-protein coupled photoreceptor activity
GO:0009881photoreceptor activity
Vocabulary: biological process
TermDefinition
GO:0016038absorption of visible light
GO:0016056rhodopsin mediated signaling pathway
GO:0007186G-protein coupled receptor signaling pathway
GO:0007601visual perception
GO:0007165signal transduction
GO:0007602phototransduction
GO:0009584detection of visible light
GO:0018298protein-chromophore linkage
GO:0050896response to stimulus
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000418head
PLANA:0002075pigment cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR001760Opsin
IPR017452GPCR_Rhodpsn_7TM
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 185..208
score: 25.69
coord: 241..265
score: 24.2
coord: 55..76
score: 24.11
coord: 280..306
score: 25.2
coord: 22..46
score: 22.57
coord: 136..157
score: 21.69
coord: 100..122
score: 28.37
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 37..298
e-value: 9.7E-36
score: 123.4
IPR001760OpsinPRINTSPR00238OPSINcoord: 43..55
score: 37.46
coord: 277..289
score: 46.53
coord: 158..170
score: 58.79
NoneNo IPR availableGENE3DG3DSA:1.20.1070.10coord: 4..337
e-value: 1.0E-71
score: 243.4
NoneNo IPR availablePANTHERPTHR24240OPSINcoord: 23..315
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..35
score: 5.0
NoneNo IPR availableCDDcd149697tmA_Opsins_type2_animalscoord: 22..309
e-value: 8.49683E-71
score: 220.541
NoneNo IPR availableSUPERFAMILYSSF81321Family A G protein-coupled receptor-likecoord: 18..330
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 278..300
NoneNo IPR availableTMHMMTMhelixcoord: 241..263
NoneNo IPR availableTMHMMTMhelixcoord: 22..44
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 37..298
score: 36.079