TNF receptor-associated factor
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032686 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 17Note: Hover over icons to view figure legend
Homology
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 119.783 bits (299), Expect = 2.421e-28 Identity = 91/341 (26.69%), Postives = 164/341 (48.09%), Query Frame = 1 Query: 415 PSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQL----WKIEDK------LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 PS C F GC Q +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + +LSR D+ L ++ D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 229 PSTCSFKRYGCVF-QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGL--LESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 563
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 119.783 bits (299), Expect = 2.421e-28 Identity = 91/341 (26.69%), Postives = 164/341 (48.09%), Query Frame = 1 Query: 415 PSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQL----WKIEDK------LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 PS C F GC Q +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + +LSR D+ L ++ D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 229 PSTCSFKRYGCVF-QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGL--LESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 563
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 115.931 bits (289), Expect = 3.723e-27 Identity = 90/354 (25.42%), Postives = 166/354 (46.89%), Query Frame = 1 Query: 406 KSNPSDCPFSYIGCRNK---------QPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIED-----------KLETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 K +DCP + C +K + +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + +LSR D Q+ + D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 191 KHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGL--LESQLSRHD-QMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 538
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 115.931 bits (289), Expect = 3.723e-27 Identity = 90/354 (25.42%), Postives = 166/354 (46.89%), Query Frame = 1 Query: 406 KSNPSDCPFSYIGCRNK---------QPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIED-----------KLETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 K +DCP + C +K + +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + +LSR D Q+ + D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 191 KHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGL--LESQLSRHD-QMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 538
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 110.153 bits (274), Expect = 2.662e-25 Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 904 LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 326 LETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 480
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-1 (TNF Receptor Associated Factor (TRAF) homolog; TRF-1 [Source:UniProtKB/TrEMBL;Acc:G5EG80]) HSP 1 Score: 63.1586 bits (152), Expect = 1.850e-10 Identity = 34/106 (32.08%), Postives = 53/106 (50.00%), Query Frame = 1 Query: 874 DRQLWKIEDKLETVN--FG-EFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQS 1182 DRQ +I ET FG + +W + Q+ NEA+ +T +S F +H+ GYKM G G +++Y L++G FD L WP + +L+DQ+ Sbjct: 245 DRQT-RILSAAETCTEMFGPQLIWKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLYVLLLKGEFDPTLEWPFHRAIKISLLDQN 349
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-2 (TNF Receptor Associated Factor (TRAF) homolog [Source:UniProtKB/TrEMBL;Acc:Q9N586]) HSP 1 Score: 60.4622 bits (145), Expect = 8.664e-10 Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 964 NEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALI 1173 N++ +SI YS F++H GYKM P G + +++ CLM+G +D+IL WP + DVTF+++ Sbjct: 177 NKSHRSI----YSQPFYSHGYGYKMMAVAAPYGDGLAFREYFSVFVCLMKGEWDDILEWPFRCDVTFSIL 242
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf4 (gene:FBgn0026319 transcript:FBtr0334401) HSP 1 Score: 75.8702 bits (185), Expect = 2.356e-14 Identity = 45/171 (26.32%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 865 SRFDRQLWKIEDKLE--TVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNK-KIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 SR +Q+ ++ + ++N+ G +W + D+S K+ EAR E S F+T + GYK+ + G G+ +H+++Y ++ G +D +L WP +TF L +Q F P + +P+ ++G+G+ +FI ELL + + D +F++ V Sbjct: 300 SRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFIS-HELLHSRPFIKGDTVFLRVKV 469
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf4 (gene:FBgn0026319 transcript:FBtr0077429) HSP 1 Score: 75.8702 bits (185), Expect = 2.485e-14 Identity = 45/171 (26.32%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 865 SRFDRQLWKIEDKLE--TVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNK-KIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 SR +Q+ ++ + ++N+ G +W + D+S K+ EAR E S F+T + GYK+ + G G+ +H+++Y ++ G +D +L WP +TF L +Q F P + +P+ ++G+G+ +FI ELL + + D +F++ V Sbjct: 309 SRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFIS-HELLHSRPFIKGDTVFLRVKV 478
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf6 (gene:FBgn0265464 transcript:FBtr0071188) HSP 1 Score: 55.0694 bits (131), Expect = 8.509e-8 Identity = 39/164 (23.78%), Postives = 71/164 (43.29%), Query Frame = 1 Query: 868 RFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKI-GYGYHKFIEIEELLKNPSIFQEDRIFIK 1356 R RQ ++ + G VW ++ + R + N + YS +T +GYK C R++ I K L+++ LMQ D L WP K + ++ + + T P+ A++KP G+G+ ++ I +++ +DR+ IK Sbjct: 315 RLARQQAPVDPRYSN---GTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLN---IQPRKPHVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDT--IMTKPEILAFHKPREAISTRGFGFLEYANISNIIQL-GFCADDRLLIK 469
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf-like (gene:FBgn0030748 transcript:FBtr0308606) HSP 1 Score: 54.6842 bits (130), Expect = 9.820e-8 Identity = 38/147 (25.85%), Postives = 64/147 (43.54%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGY----HKFIEIEELLKNPSIFQEDRIF 1350 G +W +KD+S+K+ E+ K +T +S F GY + L + G KG ++ ++ G +D +L+WP + + DQ T A +D+ K + + Y HK I L+N S+F E R+ Sbjct: 255 GHLIWRIKDYSKKLEES-KQYDTILHSAMFSNKAFGYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQCTN------VADAEDYVKTIFVRKKSDDFIQSNQYFHIPHKVITSRNYLRNDSMFIEVRVL 394
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf-like (gene:FBgn0030748 transcript:FBtr0074274) HSP 1 Score: 54.6842 bits (130), Expect = 9.820e-8 Identity = 38/147 (25.85%), Postives = 64/147 (43.54%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGY----HKFIEIEELLKNPSIFQEDRIF 1350 G +W +KD+S+K+ E+ K +T +S F GY + L + G KG ++ ++ G +D +L+WP + + DQ T A +D+ K + + Y HK I L+N S+F E R+ Sbjct: 255 GHLIWRIKDYSKKLEES-KQYDTILHSAMFSNKAFGYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQCTN------VADAEDYVKTIFVRKKSDDFIQSNQYFHIPHKVITSRNYLRNDSMFIEVRVL 394
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf3 (TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]) HSP 1 Score: 118.242 bits (295), Expect = 5.236e-28 Identity = 95/339 (28.02%), Postives = 177/339 (52.21%), Query Frame = 1 Query: 424 CPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITN--------SKRENKKLKKEIEIMKFDSERKEALIS-DLLMNDRM-KTEQIEYLFQQLH--QSDSDSDETQYTHVDD-KSEVSS-----VRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKL---ETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 C F GC K +++E+ +H ++ H +++ +L+ +++ +KSE+ S R + ++ E+ + + + ++ L+S +LM+ K ++E ++L ++ + ET V+ +S VSS V + S S + + ++ +++ +D +S D +L +++ KL ET +F G +W ++D+ ++ EA S YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ H+ F P + ++ +PT I G F+ + +L+N + ++D IFIK TV T+ Sbjct: 234 CSFIRYGCSYKG-LNQEMREHESSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEVERQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRAMREEVETLRGSVESMRSMVSSLDSSCVNSASGSHTLASLEQQLTRHDDLMSVHDVRLAEMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTLMLMDQGPARKHL--GDAFKPDPSSSSFRRPTGEMNIASGCPLFV-AQTVLENGTYIKDDTIFIKVTVDTS 568
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf4a (tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]) HSP 1 Score: 102.064 bits (253), Expect = 8.401e-23 Identity = 56/166 (33.73%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 898 DKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 ++L + G +W + D+S+K+ EA+ N EF+S F+TH+ GYK+ + G G+GSHL+IY ++ G +DN+L WP + VTF+++DQS + H+ T F+ P+ + KP +++ +G+GY KFI EE+ K + +++ IF+K ++ Sbjct: 300 EELSVSHDGVLIWKLTDYSRKLQEAKLRNNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHI--TETFNPDPNWKNFQKPCSSRNSLDESTLGFGYPKFISHEEIKKR-NYIRDNSIFLKASI 462
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf4a (tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]) HSP 1 Score: 102.064 bits (253), Expect = 8.401e-23 Identity = 56/166 (33.73%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 898 DKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 ++L + G +W + D+S+K+ EA+ N EF+S F+TH+ GYK+ + G G+GSHL+IY ++ G +DN+L WP + VTF+++DQS + H+ T F+ P+ + KP +++ +G+GY KFI EE+ K + +++ IF+K ++ Sbjct: 300 EELSVSHDGVLIWKLTDYSRKLQEAKLRNNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHI--TETFNPDPNWKNFQKPCSSRNSLDESTLGFGYPKFISHEEIKKR-NYIRDNSIFLKASI 462
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: BX901915.1 (pep chromosome:GRCz11:CHR_ALT_CTG5_1_18:28764891:28768979:-1 gene:ENSDARG00000109857.1 transcript:ENSDART00000191629.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX901915.1) HSP 1 Score: 98.5969 bits (244), Expect = 1.198e-22 Identity = 79/303 (26.07%), Postives = 135/303 (44.55%), Query Frame = 1 Query: 469 EEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNF----GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 E+I DH + H LL+ I +K L+S++ ++ R ++L E+++ F++ I +L + ++ + + H+ D D E V +R D + ++E K+ ++ G FVW + DFS+K +A +S +F+T K GYKMCLR+ G G+G+HL+++F +M+G D +L WP VT L+DQ+ H+ R D +F +P ++ I G F + +L S ++D IFIK V Sbjct: 4 EKIHDHEQACSYEHLNLLLHFIMGIKVNLESLQPQMVELSRRCQEL--ELKVNTFEN------IVCVLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLR-------------------------DLSIVEMEAKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNRE-HIIDAFRPDISSSSF--QRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIV 270
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: AL844899.1 (pep chromosome:GRCz11:CHR_ALT_CTG5_2_4:28756846:28760787:-1 gene:ENSDARG00000111038.1 transcript:ENSDART00000183806.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AL844899.1) HSP 1 Score: 98.5969 bits (244), Expect = 1.198e-22 Identity = 79/303 (26.07%), Postives = 135/303 (44.55%), Query Frame = 1 Query: 469 EEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNF----GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 E+I DH + H LL+ I +K L+S++ ++ R ++L E+++ F++ I +L + ++ + + H+ D D E V +R D + ++E K+ ++ G FVW + DFS+K +A +S +F+T K GYKMCLR+ G G+G+HL+++F +M+G D +L WP VT L+DQ+ H+ R D +F +P ++ I G F + +L S ++D IFIK V Sbjct: 4 EKIHDHEQACSYEHLNLLLHFIMGIKVNLESLQPQMVELSRRCQEL--ELKVNTFEN------IVCVLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLR-------------------------DLSIVEMEAKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNRE-HIIDAFRPDISSSSF--QRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIV 270
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 117.087 bits (292), Expect = 1.574e-27 Identity = 98/390 (25.13%), Postives = 182/390 (46.67%), Query Frame = 1 Query: 256 CENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRE-----NKKLKKEIEIMKFDSERK--EALISDL---LMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKIN---DKLSRFDRQLWKIEDK---LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 C NQ+ +E D S V++ P S + ++ + PS C F GC K +++I H + + H L+ + L+ ++ +++E + + N+ EIEI + + + EA I L + K + ++ + L Q+ ++D + + ++ +S + M+ + ++ + ++IN LS D +L ++ + LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K V+ L+DQ H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 175 CRNQVPLVEMQKHEDVDCPS----VVISCPHMCSVKSLLRSELNAHLLECVNAPSTCSFKRYGCTFKG-TNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYESLQNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 556
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 110.538 bits (275), Expect = 2.482e-25 Identity = 87/344 (25.29%), Postives = 165/344 (47.97%), Query Frame = 1 Query: 421 DCPFSYIGCRN---------KQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRE-----NKKLKKEIEIMKFDSERK--EALISDL---LMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKIN---DKLSRFDRQLWKIEDK---LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 DCP I C + + +++I H + + H L+ + L+ ++ +++E + + N+ EIEI + + + EA I L + K + ++ + L Q+ ++D + + ++ +S + M+ + ++ + ++IN LS D +L ++ + LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K V+ L+DQ H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 191 DCPSVVISCPHMCSVKSLLRSEGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYESLQNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 531
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: sytl2 (synaptotagmin like 2 [Source:Xenbase;Acc:XB-GENE-945155]) HSP 1 Score: 99.3673 bits (246), Expect = 7.810e-22 Identity = 57/172 (33.14%), Postives = 100/172 (58.14%), Query Frame = 1 Query: 880 QLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +L K ++L + G +W + D+S+K+ EA+ N E +S F+THK GYK+ + G G+GS+L++Y ++ G +DN+L WP + VTF+L+DQS + H+ T F+ P+ + KPT ++ +G+GY KFI E++ K + +++ IF++ +V Sbjct: 294 ELRKQVEELSVSSEGVLIWKISDYSRKVQEAKVRGNFESFSPPFYTHKYGYKLQVSAFLNGNGSGEGSYLSVYIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHI--TETFNPDPNWKNFQKPTGSRNSLDESTLGFGYPKFISHEDIRKR-NYVRDNAIFLRASV 462
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: hspb6 (heat shock protein family B (small) member 6 [Source:Xenbase;Acc:XB-GENE-876273]) HSP 1 Score: 94.3597 bits (233), Expect = 2.033e-20 Identity = 51/156 (32.69%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDD-HPD--NFAWNKPTTNKKIGYGYHKFIEIEELLKNP--SIFQEDRIFIKCTVHTN 1374 G F+W + D + K ++A YS +F+T K GYK+CLR+ G GKG+H++++F +M+G +D +L WP K VTF L+D + R + FD PD + ++ +P + + G F I + L +P + +E+ ++I+C + TN Sbjct: 230 GVFLWKISDLTNKSHDAVTGRAISLYSPAFYTAKYGYKVCLRIYLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTFVLVDHNN------RDSVFDAFRPDVTSASFQRPINDMNVASGCPLFCPIAK-LNSPKHAYIRENTLYIRCIIDTN 378
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: slc12a1 (solute carrier family 12 member 1 [Source:Xenbase;Acc:XB-GENE-479925]) HSP 1 Score: 95.5153 bits (236), Expect = 2.129e-20 Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEEL--LKNPSIFQEDRIFIKCTV 1365 G+ +W + D+ +K EA + +S F+T GY++C R G GKGS L++YF +M+G FD+IL WP K VT L+DQS H+ R D P++ ++ +P + I G +F +L KN ++D +FIK V Sbjct: 384 GKLIWKITDYERKKREAMEGRAVSIFSQHFYTSWCGYRLCARAYLNGDGSGKGSFLSLYFVVMKGEFDSILLWPFKQKVTLMLLDQSGKKNHITDVFRAD--PNSSSFKRPDSEMNIASGCPRFASHAQLENPKNGCYIKDDTLFIKIVV 531
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 120.553 bits (301), Expect = 9.962e-29 Identity = 91/342 (26.61%), Postives = 164/342 (47.95%), Query Frame = 1 Query: 415 PSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIED-----------KLETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 PS C F GC Q +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + + +LSR D Q+ + D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 228 PSTCSFKRYGCVF-QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGL--LESQLSRHD-QMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 562
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 116.701 bits (291), Expect = 1.591e-27 Identity = 89/349 (25.50%), Postives = 167/349 (47.85%), Query Frame = 1 Query: 418 SDCPFSYIGCRNK---------QPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQL----WKIEDK------LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 +DCP + C +K + +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + + +LSR D+ L ++ D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 194 TDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGL--LESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 537
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 116.701 bits (291), Expect = 1.591e-27 Identity = 89/349 (25.50%), Postives = 167/349 (47.85%), Query Frame = 1 Query: 418 SDCPFSYIGCRNK---------QPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQL----WKIEDK------LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 +DCP + C +K + +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + + +LSR D+ L ++ D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 194 TDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGL--LESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 537
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf5 (TNF receptor-associated factor 5 [Source:MGI Symbol;Acc:MGI:107548]) HSP 1 Score: 98.2117 bits (243), Expect = 9.271e-23 Identity = 48/149 (32.21%), Postives = 82/149 (55.03%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIF-QEDRIFIKCTV 1365 G+ +W V D+ K EA + +S F+T + GY++C R G GKG+HL++YF +M+G FD++L WP + VT L+DQS H+ T + D P++ ++ +P I G +F+ L + + + ++D +F+K V Sbjct: 96 GKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAV 242
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf5 (TNF receptor-associated factor 5 [Source:MGI Symbol;Acc:MGI:107548]) HSP 1 Score: 98.2117 bits (243), Expect = 9.271e-23 Identity = 48/149 (32.21%), Postives = 82/149 (55.03%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIF-QEDRIFIKCTV 1365 G+ +W V D+ K EA + +S F+T + GY++C R G GKG+HL++YF +M+G FD++L WP + VT L+DQS H+ T + D P++ ++ +P I G +F+ L + + + ++D +F+K V Sbjct: 96 GKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAV 242
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q60803|TRAF3_MOUSE (TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN=Traf3 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.968e-28 Identity = 91/342 (26.61%), Postives = 164/342 (47.95%), Query Frame = 1 Query: 415 PSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIED-----------KLETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 PS C F GC Q +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + + +LSR D Q+ + D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 228 PSTCSFKRYGCVF-QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGL--LESQLSRHD-QMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 562
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q13114|TRAF3_HUMAN (TNF receptor-associated factor 3 OS=Homo sapiens OX=9606 GN=TRAF3 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.162e-27 Identity = 91/341 (26.69%), Postives = 164/341 (48.09%), Query Frame = 1 Query: 415 PSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQL----WKIEDK------LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 PS C F GC Q +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + Q+ ++D + + ++ V+ + ++ S + + +LSR D+ L ++ D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 229 PSTCSFKRYGCVF-QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGL--LESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHL--GDAFKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 563
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|P70191|TRAF5_MOUSE (TNF receptor-associated factor 5 OS=Mus musculus OX=10090 GN=Traf5 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.093e-22 Identity = 87/347 (25.07%), Postives = 155/347 (44.67%), Query Frame = 1 Query: 379 RIQNRIISIKSNPSDCPFSYIGCRNKQP----IDEE---IDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDL--LMNDRMKTE----QIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNF----GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIF-QEDRIFIKCTV 1365 R+ + DCPF + GC K ++ E + DH+ L + L I L L+ +S+I KK +KE++ R +S++ L + K+ Q+ L Q ++Q S D D + + + + + SK + ++ QL K E++ + + G+ +W V D+ K EA + +S F+T + GY++C R G GKG+HL++YF +M+G FD++L WP + VT L+DQS H+ T + D P++ ++ +P I G +F+ L + + + ++D +F+K V Sbjct: 207 RVNEHLTVCPEAEQDCPFKHYGCTVKGKRGNLLEHERAALQDHML-LVLEKNYQLEQRISDLYQSLEQKESKIQQLAETVKKFEKELKQFTQMFGRNGTFLSNVQALTSHTDKSAWLEAQVRQLLQIVNQQPSRLDLRSLVDAVDSVKQRITQLEASDQRLVLLEGETSKHDAHINIHKAQLNKNEERFKQLEGACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAV 550
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q61382|TRAF4_MOUSE (TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN=Traf4 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 3.052e-21 Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 862 LSRFDRQLWKIEDKLETVNFGE---FVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNF----AWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +SR ++L ++ +LE ++ G +W + + +++ EA+ N E +S +F+THK GYK+ + G G+G+HL+IY ++ G FDN+L WP VTF+L+DQS + H+ T D + NF W +G+GY KFI +++ K + ++D +FI+ +V Sbjct: 285 VSRQRQELQELRRELEELSIGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRKR-NYVRDDAVFIRASV 462
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q9BUZ4|TRAF4_HUMAN (TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN=TRAF4 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.487e-21 Identity = 56/179 (31.28%), Postives = 98/179 (54.75%), Query Frame = 1 Query: 862 LSRFDRQLWKIEDKLETVNFGE---FVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNF----AWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +SR ++L ++ +LE ++ G +W + + +++ EA+ N E +S +F+THK GYK+ + G G+G+HL++Y ++ G FDN+L WP VTF+L+DQS + H+ T D + NF W +G+GY KFI +++ K + ++D +FI+ V Sbjct: 285 VSRQRQELQELRRELEELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRKR-NYVRDDAVFIRAAV 462
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1E101 (TRAF-6 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 9.585e-40 Identity = 123/485 (25.36%), Postives = 229/485 (47.22%), Query Frame = 1 Query: 43 MANGKSENLTKIISNGVAENNHDSFEDDL-CVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDS--------------------DSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNFG--------------------EFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDN-FAWNKPTTNKK-IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVH 1368 M K +N+ +++S + +S +DL C++CN + + C S CGC YC+ CI YL+ CPG +C+ LN+E D+ + L++RISR++VK P ++ ++ R++ + +CP IGC + + +E+ HLT+Q L H++L++ S C+ +KSEI ++ N+ K++I S KE L +ND KT Q+E+L ++L D+ S E++ + KS++ R + I +++ ++++ I+ +++ N +F+W ++++S+K R+++ T+ YSDSF +H YK CL + + G +L ++ +M+G D+ L WPM+ VT ++I+Q + H ++D + N A+++P + G + + + P I D I + C VH Sbjct: 1 MIPSKLDNVQELLSKYNVKRVDESVNNDLLCILCNKLMRDACESACGCHYCYTCIRIYLSQNHNYCPGDKTECKEDYLNLEGDVFRNIRLSTRISRIVVKCPNIRCNYTSELLRLKEHLDKCTPESVECPCVTIGCEEEPLLKDEMAKHLTDQVLRHTQLIM-SFCN------ELKSEINHN---NETTKEDI------SHLKEVLRVQKALNDE-KTAQMEFLIEELRNKDNMILVLSQDIQEVKNEMITLLTSKESELKKL--KSDIQIFRQEIEFMKNDLEVVGSTDIKNQVKDLKKEIFGIKMNIDSNNEERERKMNNLIRLNKLCPNVDMDFMWRIEEYSKK----RRTV-TDVYSDSFQSH--NYKFCLNL------YIYGDNLGLWCVIMKGEKDDFLEWPMRRTVTLSIIEQDSLKTHKTTVFQYDTYQRNKKAFDRPKDERNDYCIGTDSLVRYSYIKETPMILVNDSIIVACVVH 453
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A291RBW5 (TRAF3 OS=Sinanodonta woodiana OX=1069815 GN=TRAF3 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.896e-27 Identity = 94/374 (25.13%), Postives = 165/374 (44.12%), Query Frame = 1 Query: 376 KRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLL--------------IDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDS-----------------ERK--EALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKIND---KLSRFDRQLWKIEDKL----------ETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIK 1356 + IQ + S P +C F IGC +EE+ +H N + H ++L I+ I + E +K + K E LK ++E +K S ERK + + D++ +T +++ ++L + + + T V VR ++ND +L+ DRQ ++ +L ET ++ G +W ++D++++ EA YS F++ + GYKMC RV G GK +H++++F +M+G +D +L WP + VT L+DQ +G H+ T F P + ++ +PTT I G F+ +L+ P+ ++D IFIK Sbjct: 191 REIQGHLESCPRKPKECRFKVIGC-TYMATEEEVSNHEINDGVHHMEILSIFVTNSGLNRLQLINQIQEIAAERDGLKRRLEQHKEELASLKSQVEALKTASKDAKMRMVSQTERIIQLERKSEDTVKRDVMERCEQQTRELQVTIRELREKLTLLERRPATGVGSSEAGVQVRP--------------EELNDMKQQLTMHDRQFHNLDVRLAELDLRFQVLETASYDGILLWKIRDYTRRKQEAITGKTLSLYSQPFYSSRFGYKMCARVYLNGDGMGKNTHMSLFFVVMRGEYDALLPWPFQQKVTLMLLDQQSGQRHLSDT--FKPDPASSSFKRPTTEMNIASGCPLFVS-HSVLETPTYIKDDIIFIK 546
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A5N4E4B7 (TNF receptor-associated factor 3 OS=Camelus dromedarius OX=9838 GN=Cadr_000006503 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.010e-27 Identity = 93/342 (27.19%), Postives = 164/342 (47.95%), Query Frame = 1 Query: 415 PSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALI----SDLLMNDRMKTEQIEYL------FQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIED-----------KLETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 PS C F GC Q +++I H + + H LL + SL+ ++ +++E + + L +I + + ER++ ++ S +L R+ Q E L + QS ++D + + +S V+ + ++ S + + + +LSR D Q+ + D LET ++ G +W ++D+ ++ EA YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ + H+ F P++ ++ KPT I G F+ + +L+N + ++D IFIK V T+ Sbjct: 32 PSTCSFKRYGCVF-QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQSWEEADSVKSSVESLQSRVTELESVDKSAGQAARNTGL--LESQLSRHD-QMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDA--FKPDPNSSSFKKPTGEMNIASGCPVFV-AQTVLENGTYIKDDTIFIKVIVDTS 366
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: C3Y0R3 (Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_237984 PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.891e-27 Identity = 99/341 (29.03%), Postives = 163/341 (47.80%), Query Frame = 1 Query: 418 SDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSL-------KHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDD-KSEVSSVRTMXXXXXXXXXXXXXXK-----INDKLSRFDRQLWKIEDK-----------LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 ++C FS GC K + DH + H +L+ S+ SL K ELQ +E K + K+ + E+ MK + ++EA I+ L +M Q + +Q++ + VD K E+SSV+ + + + +L+ DRQL I D LET +F G +W +KD++++ +EA YS F+T + GYKMC RV G GKG+H++++F +M+G +D +L WP + VT L+DQ G H+ T R D P + ++ +PT++ I G F+ + + ++ + +D IFIK V Sbjct: 195 AECSFSSHGCPFKGR-RSALQDHESQSMTEHFELVTRSLGSLELEHSRTKRELQEKNNETEVLKEKVKQQEAEVASMKQSNSKQEAKIAAL---QKMMASQTD---RQINIEQGLGSTAKKEEVDQQKRELSSVKEQVKRLDNRVNTGNTVDFLSGVMETQLNAHDRQLG-IHDVRLAEMDLRFQILETASFDGTLLWKIKDYTRRKHEAVTGRTLSLYSQPFYTSQFGYKMCARVYLNGDGMGKGTHMSLFFVVMRGEYDALLPWPFRQKVTLMLLDQDQGRRHLSDTFRPD--PTSSSFKRPTSDMNIASGCPLFVS-QSVAESKTYLNDDTIFIKVIV 524
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1DBK6 (TRAF-4 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.548e-26 Identity = 109/440 (24.77%), Postives = 196/440 (44.55%), Query Frame = 1 Query: 130 CVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNL------SHSKLLI---------------------DSICSLKHELQSIKSEITNSKR-ENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 CV+C +I ++ + CGC+YC +CI+NYL +K C DC + I + D++ IS + VK + F D +K I+ + + C C + I EE +HL N+ L + + L+ ++IC +S + + + K ENK L+ + + FD ++ LI M + + T E+ + ++ E Q H++++ + + + + + K + +SR D L + + G+++W +K FS+ A + N S++F+T GYKMC+++ P G GKG+HL+I+F +M+G +D+IL WP K V + D + ++ T F P + + +P I G KFI EL + ++D ++I+ V Sbjct: 31 CVMCQDILLDAIQTDCGCRYCKECIDNYLENGEKECVAEYEDCRSVI----TSYIYDRATNKEISLLKVKCLYEGCVFEDTLKSIKGHLDFCEYRNEMCSL----CGMEYIIKEE-SNHLANECLLREVLCQYCRTLLTFKEYNESHLCFESRDLCGKYEAICPYGCTGESKVNLLHHRKSCENKPLECPLHV--FDCKQ---LIPKDQMTEHLNTSSYEHTLTIV--TELRKLEKQNKHMEERMNILIEENQLLKATLEVMKLDLPKNSGSISR-DTSLKRANKTI--FRNGKYMWKIKSFSKLRENAMRGKNPTILSEAFYTSDFGYKMCMKIYPCGDGVGKGTHLSIFFVIMKGDYDDILPWPFKNKVIITIFDDFSKSTNLSDT--FKPDPKSICYQRPEEEYNIASGSPKFISFSEL---KNFLKKDTLYIQINV 446
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: ENSAMXT00000035169.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:3354744:3362219:1 gene:ENSAMXG00000029095.1 transcript:ENSAMXT00000035169.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 103.605 bits (257), Expect = 9.730e-26 Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 922 GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 G +W ++D+ ++ EA S YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ H+ F P++ ++ +PT I G F+ + +L+N + ++D IFIK TV T+ Sbjct: 4 GTLIWKIRDYKRRKAEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDA--FKPDPNSSSFRRPTGEMNIASGCPLFVA-QTVLENGTYIKDDTIFIKVTVDTS 151
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf4a (TNF receptor associated factor 4 [Source:NCBI gene;Acc:103024022]) HSP 1 Score: 100.908 bits (250), Expect = 1.549e-22 Identity = 55/166 (33.13%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 898 DKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 ++L + G +W + D+S+K+ EA+ N EF+S F+TH+ GYK+ + G G+GSHL+IY ++ G +DN+L WP + VTF+++DQS + H+ T F+ P+ + KP++++ +G+GY KFI +E+ K + +++ IF+K ++ Sbjct: 300 EELSVSHDGVLIWKLNDYSRKLQEAKLHNNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFAYKVTFSILDQSDPSLSKPQHI--TETFNPDPNWKNFQKPSSSRNSLDESTLGFGYPKFISHDEIRKR-NYIRDNAIFLKASI 462
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:103028261]) HSP 1 Score: 100.908 bits (250), Expect = 1.933e-22 Identity = 59/177 (33.33%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 847 KINDKLSRFDRQLWKIEDKLETVNF----GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 ++ L+ D QL + E L + F G FVW + DFS++ +A +S +F++ K GYKMCLR+ G G+GSHL+++F +M+G +D +L WP VT L+DQ+ H+ R D +F +P + I G F + +L S ++D IFIK V Sbjct: 353 QLERTLTMRDLQLAESEQALRELQFCTYDGVFVWKISDFSRRRQDALAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNN-REHIIDAFRPDISSTSF--QRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIV 526
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf1 (TNF receptor-associated factor 1-like [Source:NCBI gene;Acc:103045252]) HSP 1 Score: 100.523 bits (249), Expect = 2.697e-22 Identity = 58/175 (33.14%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 859 KLSRFDRQLWKIEDKLET---VNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNP--SIFQEDRIFIKCTV 1365 +L R D Q+ ++ + V++ G F+W + D SQK+ EA + YS +F+T + G+K+C+R+ G GKG+H++++F +M+G +D +LSWP K VTF LIDQ+ H+ R D +F +P + + G F + + L++P + ++D +FIKC V Sbjct: 367 RLIRKDLQISSLQQSISAQQDVSYDGTFLWRICDVSQKLKEAATGQKSSQYSPAFYTSRYGFKVCMRLYMYGDGVGKGTHISLFFVIMKGDYDPLLSWPFKQKVTFFLIDQNQ-REHVVDAFRPDLRSASF--QRPVSEMNVASGCPLFFPLSK-LRSPKHAYVKDDTLFIKCVV 537
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf1 (TNF receptor-associated factor 1-like [Source:NCBI gene;Acc:103045252]) HSP 1 Score: 100.523 bits (249), Expect = 3.098e-22 Identity = 58/175 (33.14%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 859 KLSRFDRQLWKIEDKLET---VNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNP--SIFQEDRIFIKCTV 1365 +L R D Q+ ++ + V++ G F+W + D SQK+ EA + YS +F+T + G+K+C+R+ G GKG+H++++F +M+G +D +LSWP K VTF LIDQ+ H+ R D +F +P + + G F + + L++P + ++D +FIKC V Sbjct: 344 RLIRKDLQISSLQQSISAQQDVSYDGTFLWRICDVSQKLKEAATGQKSSQYSPAFYTSRYGFKVCMRLYMYGDGVGKGTHISLFFVIMKGDYDPLLSWPFKQKVTFFLIDQNQ-REHVVDAFRPDLRSASF--QRPVSEMNVASGCPLFFPLSK-LRSPKHAYVKDDTLFIKCVV 514
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 121.324 bits (303), Expect = 3.966e-30 Identity = 86/348 (24.71%), Postives = 173/348 (49.71%), Query Frame = 1 Query: 418 SDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKREN---------KKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLH----QSDSDS-----DETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKL----------ETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 ++C FS GC+ K + + + +H + H L+ +L+ ++ ++S++ ++R N ++L+KE+ + + + E+++ + ++TE++ L + + ++D D+ D T T + + V+++ S + S + ++ ++ LSR D QL+ + +L ET ++ G+ VW ++D++++ +A YS F+T GY+MC R G G+G+HL+++F +M+G +D +L WP + VT L+DQ + T F P + ++ +PT++ I G F+ L++ S Q+D IFIK V T Sbjct: 131 AECFFSQFGCKYKGTL-QGLKEHESGATQQHLSLVTARSANLELKVSMLQSQL--AERANSADLLGTRVRELEKELISVGQTASKNESVLCVVQRMLAVQTERLLRLQESMQGTTRRADHDALRGDLDGTAATLHELGTRVAAIEESGGSVTHSSTPTRLAALDSALSRHDTQLFAHDTRLAEMDLRFQVLETASYNGKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLDQGAARRQLSDT--FKPDPASSSFRRPTSDMNIASGCPLFVS-HVALESASYLQDDTIFIKVVVDTG 472
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 110.153 bits (274), Expect = 1.350e-26 Identity = 80/330 (24.24%), Postives = 148/330 (44.85%), Query Frame = 1 Query: 424 CPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKT---------EQIE--YLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKIND-KLSRFDRQLWKIEDK---LETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 C F +GC KQ E + +H + SH L+I L+ + ++ I + ++ L + + ++ D L N R+ + EQ++ ++ Q+ Q D+D T D + +R + + +++ +L+ D L E + LET + G+ VW ++D++++ EA YS F+T GYKMC R G G+G+HL+++F +M+G +D +L WP + VT +L+DQ H+ T F P + ++ +P + + G F+ L+ S +D +F++ V Sbjct: 91 CGFHMLGCTFKQGTSESVREHEESAVRSHFTLVISRNSELELQCARLQCSIEDHTNMSEMLTQRVAQLEQDLSHWSTLTGS--NNTRLGSTLEMLTQHNEQLQSLHVAQRAPQRDAD---TAALRRDMATLRERLRALEAALGNPGPCEERCHMHEQRLTMHDGLLDTAERRLQVLETAGYSGKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLLDQGAARRHLSDT--FTPDPASGSFRRPDGDMNVASGCPLFVS-HVALEGSSYLVDDTVFVRVVV 412
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 73.9442 bits (180), Expect = 2.913e-14 Identity = 52/196 (26.53%), Postives = 91/196 (46.43%), Query Frame = 1 Query: 865 SRFDRQL-WKIEDKLETVNFGEFVWIVKDFSQKINEARKS----------INTEFYSDSFFTHKNGYKMCLRVD-------PIGIS------FGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQS-TGYVHMCRTARFDDHPDNFAWNKPTTNKKI-GYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 +R R L ++ + + G F W V+ FS+ + S +S F+T GY++CLR+ P G + G+ HLA++ L+QG +D+ L WP K + +++DQ VH+ T D P A+ +P+ ++ G+GY F++I L + S ++D + ++C V T Sbjct: 373 TRLVRSLEARVAESESRLCAGIFTWRVERFSRLLPGGLASGFASDGMHPDAPAVMHSSGFYTGVPGYRLCLRLQVLSGREVPAGAASPSVLLAGRQPHLALFVHLLQGDYDHRLPWPFKGRIRISVVDQCERDSVHV--TEMMDADPQLSAFQRPSVHRNPKGFGYMNFMDINT-LHHRSYLRDDCLVVRCEVVTT 565
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008091.1 (pep scaffold:Pmarinus_7.0:GL477915:34322:50582:-1 gene:ENSPMAG00000007312.1 transcript:ENSPMAT00000008091.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.447 bits (119), Expect = 5.432e-7 Identity = 28/96 (29.17%), Postives = 47/96 (48.96%), Query Frame = 1 Query: 871 FDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSIN--TEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKF 1152 R+L ++E+ T G F+W +K ++ EA + S +FFT + GY++ LR+ G H++ Y L GP+D L+WP + Sbjct: 311 LTRRLAELEN---TAYNGMFLWKIKHVINRLREAGNGAERPPQIDSPAFFTTRYGYRLRLRL------CRSGEHVSAYAMLGPGPYDATLAWPYQL 397
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO35237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM27]) HSP 1 Score: 110.538 bits (275), Expect = 4.983e-26 Identity = 98/415 (23.61%), Postives = 186/415 (44.82%), Query Frame = 1 Query: 226 DKCCPGLLVDCENQILNIENDILLDQSLTSRISRVI---VKYPEQAGQFSDDIKRIQNRIISIKSNP-----SDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKF----------DSERKEALISDLLMNDRMKTEQI------EYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKL----------ETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +K CP L+ C + +ND+ +++L + + ++ P + G +KRI+ + +S + +DC FS +GC K + +H + H LL + + L +++++ EN K E+E K+ D + ++ + N + +I E L ++ D T + + +S M SQ + +K+N +LS+ + + + KL + +++ G F+W + F+++ EA+ T YS F+TH+ GYK+C R+ P G + ++L+I+ LM+G +D+IL WP + +T LIDQ G M + FD P + ++ +PT N + G +F + +L+ E+ +F+K V Sbjct: 127 EKECPFRLITC----VYCQNDVP-ERTLIEHLKKCPAFPIECPNECG-----VKRIERKKLSAHTRECPNALTDCRFSPLGCTYKVK-KIALREHQNKHVIKHMILLGRTTGEPQPNLLELENQLERFDGENTSFKTELERHKYEFAQMKERFNDQNARLGIVEKTVANQKGDIAEIWMRFDQENLVGEVRMRDKLKKFKVKTKANKECLLS---LMKRLEVQDDSQTNPNKLNRRLSQLESSITIHKTKLFQEDLRIQIQQAISYDGTFLWKIDKFTERYAEAKSGNATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYLSIFIALMRGEYDSILPWPFQETITITLIDQDNG---MNISETFDPDPCSISFQRPTRNINVASGCPRFCS-QTVLRTRGYMNENCVFVKVVV 523
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO49464 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG36]) HSP 1 Score: 102.449 bits (254), Expect = 2.490e-23 Identity = 93/367 (25.34%), Postives = 165/367 (44.96%), Query Frame = 1 Query: 328 VIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEI----EIMKFDSERKEALISDLLMNDRMKTEQIEYLFQ-----QLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDK----LSRFDRQLWKIEDKLETVNF----GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVH-MCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 V+ + G D++ Q I P C F+ GC K E ++ H +Q H LL+ + + + + ++++ ++E K ++++ E + ++ L + +R EQ L + QL + ++ E ++E S S + ++ + D+ L+ D QL + + KL+ + G ++W + +++++ E YS F+ + GYK C RV P G GKGSHL+++F LM+G FD +L WP + VTF L+DQ VH + T R D P + ++ +PT+N I G FI L+ + ++D +FIK V T Sbjct: 166 VVCPHCGAEGICRDELLHHQTNICEQAELP--CSFAKHGCHFKG-TREALETHFRDQASVHVNLLLTATQNEEKARSEMAAKLSQMEKERAKQQEQMYEQREALAVANQNLRTYQGKLNVIERSVAEQRRELAELKERIQLQEVEAAIREQDRRLGMIENEASRGAAPSSGPGSMGGTMALERRQDRNEHQLALHDIQLAEHDLKLQMLEATSYDGTYIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYPNGDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLLDQDR--VHDIGDTFRPD--PTSSSFKRPTSNMNIASGCPLFISHTN-LQTRAYVRDDTMFIKIAVDTT 524
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO32851 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STV5]) HSP 1 Score: 96.6709 bits (239), Expect = 1.435e-21 Identity = 55/181 (30.39%), Postives = 98/181 (54.14%), Query Frame = 1 Query: 847 KINDKLSRFDRQLWKIEDKL---ETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWN-----KPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 + ++KLS + K E +L E + + +W ++D+++K+ EA+ +S +F T K+GY++C V G GKG+H++++ +++G FD +L WP + VTF L+DQ+ + RF P+ A N +P K +G KF + EE++ + +ED IF+K +V Sbjct: 274 RFSEKLSEHGTLIEKHEKRLNDLEKIAHSQLIWRIEDYTRKMKEAKAGNTDTLFSPTFTTSKHGYRLCASVCLNGDGKGKGTHMSVFISVLKGAFDALLKWPFDYRVTFVLLDQNDDPAQR-KHIRFSIKPNPCADNEPFLGRPRLEKNASFGGAKFAKHEEIVSR-NYIKEDTIFLKISV 452
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO32849 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STV3]) HSP 1 Score: 91.6633 bits (226), Expect = 7.033e-20 Identity = 47/158 (29.75%), Postives = 91/158 (57.59%), Query Frame = 1 Query: 904 LETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTG---YVHMCRTARFDDHPDNFAW-NKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 LE + + +W ++D+++K+ EA+ +S +F T K+GY++C V G GKG+H++++ +++G FD +L WP + VTF L++Q H+ + + + PDN + +P K +G KFI+ EE +++ + ++D +F+K +V Sbjct: 300 LEKIAHSQIIWRIEDYTRKLKEAKAGNAETLFSPTFTTSKHGYRLCASVCLNGDGKGKGTHMSVFVSVLKGAFDALLKWPFHYRVTFFLLNQHENPEERKHVKFSIKPNPIPDNEPFLGRPRLEKNASFGGAKFIKHEE-IESGNFIKDDTVFLKVSV 456
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO38873 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBN4]) HSP 1 Score: 89.3521 bits (220), Expect = 3.929e-19 Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 892 IEDKLETVNFGEF----VWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +E++L T+ F +W + + + K +EA T FYS FFT +GYKMC R+ G G+ H++++F +M+G FD +L WP + VT L+DQ H+ R D P + ++ +P I G F E+L ++ I ++D +F+K V Sbjct: 319 LEERLNTLQGTTFDSVLLWKITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIYLNGDGMGRNHHVSLFFVIMRGEFDALLRWPFRQKVTLMLLDQDN-VEHVIDAFRPD--PSSSSFQRPRAEMNIASGCPLFCSHEQLTQHAYI-RDDTMFLKIIV 476
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601]) HSP 1 Score: 107.457 bits (267), Expect = 7.360e-25 Identity = 112/475 (23.58%), Postives = 188/475 (39.58%), Query Frame = 1 Query: 79 ISNGVAENNHDSFEDDLCVICNNIPINLCS---SLCGCKYCWDCIENYLNGKDKCCPGLL-----------VDCENQILNIE-------NDILLDQSLTSRISRVIV----KYPEQAGQFSDDIKR---IQNRIISIKSNPSDCPFSYIGCRNKQPIDE--------------EIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNF-GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 + G ++ ++ E C C + LC + CG ++C+ CI + L+ + CP + V C +I+ ++ N SL V V + P G+ + + R ++ K S C F C+NK P+ E +H T+ +L S+ L+ S H + ++ R ++L+ E+E + R + + L Q S ETQ DD V +R + D RF LET ++ G +W ++D+ ++ +A YS F+T GYKMC RV G GKG+HL+++F +M+G +D +L WP K VT L+DQ H+ F P + ++ +P I G F+ + +L++ + ++D IFIK TV T+ Sbjct: 30 VRGGFRDHFVEAPEAKYC--CEACRLVLCQPRQTECGHRFCYSCINDILSCPNPVCPADMEPLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHVNVCPFFEVPCPLGKCKERMMRKEIPEHLAWKCKYRESTCEF----CKNKMPLTELQKHKETVCPAFPVSCPNHCTSSSLPRSEKLMSS-----HTEKLLEL--ELELRSLRQLRDEMESL------------------RGTLDTVRTRLSALEQGGRASLETQLNRHDDMLSVHEIR-----------------LADMDLRFQ--------VLETASYNGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHL--GDAFKPDPSSSSFRRPVAEMNIASGCPLFVS-QSVLESGTYIKDDTIFIKVTVDTS 445
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf4a (TNF receptor associated factor 4 [Source:NCBI gene;Acc:101161428]) HSP 1 Score: 102.449 bits (254), Expect = 5.638e-23 Identity = 58/181 (32.04%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 862 LSRFDRQLWKIEDKLETVNF---GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +SR +++ ++ ++E ++ G +W + D+S+K+ EA+ N EF+S F+TH+ GYK+ + G G+GSHL++Y ++ G +DN+L WP + VTF+++DQS + H+ T F+ P+ + KP + + +G+GY KFI EE+ K + +++ IFIK ++ Sbjct: 285 VSRQRQEILELRREMEELSVSHDGVLIWKLNDYSRKLQEAKLRSNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHI--TETFNPDPNWKNFQKPCSTRNSLDESTLGFGYPKFISHEEIKKR-NYIRDNCIFIKASI 462
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf4a (TNF receptor associated factor 4 [Source:NCBI gene;Acc:101161428]) HSP 1 Score: 102.064 bits (253), Expect = 5.879e-23 Identity = 58/181 (32.04%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 862 LSRFDRQLWKIEDKLETVNF---GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +SR +++ ++ ++E ++ G +W + D+S+K+ EA+ N EF+S F+TH+ GYK+ + G G+GSHL++Y ++ G +DN+L WP + VTF+++DQS + H+ T F+ P+ + KP + + +G+GY KFI EE+ K + +++ IFIK ++ Sbjct: 285 VSRQRQEILELRREMEELSVSHDGVLIWKLNDYSRKLQEAKLRSNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHI--TETFNPDPNWKNFQKPCSTRNSLDESTLGFGYPKFISHEEIKKR-NYIRDNCIFIKASI 462
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf4a (TNF receptor associated factor 4 [Source:NCBI gene;Acc:101161428]) HSP 1 Score: 102.064 bits (253), Expect = 6.368e-23 Identity = 58/181 (32.04%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 862 LSRFDRQLWKIEDKLETVNF---GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYV----HMCRTARFDDHPDNFAWNKPTTNKK------IGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 +SR +++ ++ ++E ++ G +W + D+S+K+ EA+ N EF+S F+TH+ GYK+ + G G+GSHL++Y ++ G +DN+L WP + VTF+++DQS + H+ T F+ P+ + KP + + +G+GY KFI EE+ K + +++ IFIK ++ Sbjct: 278 VSRQRQEILELRREMEELSVSHDGVLIWKLNDYSRKLQEAKLRSNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHI--TETFNPDPNWKNFQKPCSTRNSLDESTLGFGYPKFISHEEIKKR-NYIRDNCIFIKASI 455
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 95.1301 bits (235), Expect = 1.721e-20 Identity = 79/330 (23.94%), Postives = 147/330 (44.55%), Query Frame = 1 Query: 400 SIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIE----YLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNF----GEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 S + S CPFS +GC++ + +I +H + + H +LL+ + S+ ++ + S + + + + + A S ++ K +E L +++ +S + + H D+ ++ ++ I ++ L+ D QL + E + + + G FVW + DFS + EA +S +F++ K GYKMCLR+ G G+G+HL+++F +M+ +D +L WP VT L+DQ+ H+ R D +F +P + I G F + +L ++D IFIK V Sbjct: 204 SCAKSKSACPFSEVGCKSVVE-NGKISEHEHSSTMEHLRLLLPMVLSM------TRTRLDTSPSGEWQEDSGLGLYRAPDDGCGAAASVPSVDLDKKVSALENIVCVLNREVERSSLTLEAFSHQHRLDQEKIENLSN------------KIRQLERSLTVKDLQLSEAEQMVRELQYCTYDGIFVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQNN-REHIIDAFRPDITSTSF--QRPVSEMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIV 511
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000026628.1 (SMESG000026628.1) HSP 1 Score: 884.404 bits (2284), Expect = 0.000e+0 Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1 Query: 43 MANGKSENLTKIISNGVAENNHDSFEDDLCVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTNC 1377 MANGKSENLTKIISNGV ENNHDSFEDDLCVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMSISRSASHSQRSISKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTNC Sbjct: 1 MANGKSENLTKIISNGVVENNHDSFEDDLCVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMSISRSASHSQRSISKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTNC 445
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000067216.1 (SMESG000067216.1) HSP 1 Score: 285.804 bits (730), Expect = 3.625e-91 Identity = 151/437 (34.55%), Postives = 264/437 (60.41%), Query Frame = 1 Query: 130 CVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDL--LMNDRMK--------TEQIEYLFQQLHQSDSDSDETQYTHVDD-KSEVSSVRTMXXXXXXXXXXXX---XXKINDK--------LSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTVHTN 1374 C+IC +I IN S CGC YC++CI YL+ + CPG +C+ + LNI DI++D+S +S+++VK P + F D++++I+N + CP+ IGC+ + EE+ H+ + ++HSKLL++SI +L++E++S+K + + E K+L +E+E++ D KE + L M++++ +++ +++ + + +++ET + K + +S + M S + SK DK + Q+ KIE LE N+GEF+WI++++ +K ++A+ I + F+SD+FFTHK GYK+CLR+ P+GI GKGSHL+++F +M G FDN L WP K D+TF + DQ +GY H+ ++ ++ P++ ++ KPT++K IG G KFIEI+EL N ++ ++++FI+C+V+ N Sbjct: 25 CLICKSIVINAHSGPCGCLYCFECIVTYLSKGIRFCPGNTEECQVKTLNINEDIVVDRSSNVSVSKLVVKCPNKNCSFKDELRQIENHLRICNMKCEKCPYFEIGCKESEISTEELSGHILQEIVNHSKLLLESIDNLRNEVESLKRTVEKLQVEKKQLTEEVELVMIDKIVKEMVREQLKQAMDEKVGGFNENTQISKKEDFVLYKCEKKLINANETSNEAANRVKGKSNSEQPMKDKSSNEVTGAQCEGFSKFTDKSNKSLVIDVQNLQSQILKIESNLEKENYGEFLWILENWWEKFHQAKLGIQSSFFSDAFFTHKYGYKLCLRIYPVGIGEGKGSHLSVFFHVMSGQFDNTLPWPCKLDITFKMSDQESGYDHVVQSCSYESKPNSSSYRKPTSDKNIGIGIPKFIEIKELFSNINLSSDNKLFIRCSVNIN 461
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000025558.1 (SMESG000025558.1) HSP 1 Score: 269.626 bits (688), Expect = 4.651e-85 Identity = 141/403 (34.99%), Postives = 240/403 (59.55%), Query Frame = 1 Query: 175 CGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYLFQQLHQSDSDSDETQYTHVD------DKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 CGC++C+ CI +L+G +K CPG +C+ +ILN++ +I +DQ + +ISR+ VK PE++ +F D+++++++ K + CP+S IGC +++ DHL ++ L+H+KLL++ + + +E++ +K+ + L+ EI +K D ER+ I++L +N + + + + + SD + Q D D+ E + + + S + +KI+ + DR+L ++ GEFVW + F+ K+ +A+ IN YS+SF THKNG+KMCL V P G S GKG+HL +YF LM+G FD IL WP + VTFALI+Q T H+ +T + ++P+N A+ +P T++ G+G+H+F+ EELL NP + + ++IFIKC+V Sbjct: 43 CGCRFCFSCISGFLDGGNKICPGFTEECKLEILNLDKNIYVDQPMNIKISRLKVKCPEKSCEFVDELRKMEDHSRMCKYRSAACPYSNIGCDKCNISQDKVSDHLQSEILAHTKLLMNFVGNFNNEMEMLKANNNGLSAVIELLRNEINDLKLDGERRREEIAELQVNIICLNGENVAMRENVDKLISDGERNQVEIGDLQRKCADQVEEIKLLNLEMPTSRKNLTEISNKIDKSMDNVDRKLLEMAANQNQRINGEFVWKLDKFTDKMADAKNGINAIIYSESFLTHKNGFKMCLCVYPDGFSDGKGTHLPVYFHLMKGEFDGILEWPFRHSVTFALINQRTRLPHVSKTVKCANNPNNEAFIQP-TDRNTGWGFHQFVSHEELLSNPDLMRNNQIFIKCSV 444
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000025566.1 (SMESG000025566.1) HSP 1 Score: 267.7 bits (683), Expect = 1.977e-84 Identity = 149/448 (33.26%), Postives = 256/448 (57.14%), Query Frame = 1 Query: 43 MANGKSENLTKIISNGVAENNHDSFEDDLCVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMN-------DRMKTEQIEYLFQQLHQSDSDSDETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 MA K EN+ +II N E+ + D C++C + IN ++ CGC++C+ CI +L+ ++K CPG C+ + L++ +I +D + +IS++ VK E++ +F D++ ++++ + K + CP+S IGC +++ DHL ++ L+H+KLL+D + +E++ +K+ + ENK L+ EI +K D ER+ I++L N + E + L ++ + + Q D E+ + + + S + +KI+ + DR+L ++E +N+GEF W + F+ K+ A+ INT+ YS+SF THKN YKMCL V+P G GKG+HL + F LM+G FD IL WP ++ VT ALI+Q T H+C+T ++P++ A +P T++ G G+ +F+ EEL NP + + ++IFIKC+V Sbjct: 1 MAFSKLENVWQIIINNKYESLAEIQHDMQCLLCKKLLINARNAPCGCRFCFSCISGFLDNENKICPGNTEFCKLEKLDMNINICVDNPINIKISQIKVKCAEKSCEFVDELIKMEDHSRTCKYRSAACPYSNIGCDKCNISLDKVADHLQSEILTHTKLLMDFFGNFNNEMEMLKTNNYGLRAENKLLRNEINELKLDGERRREEIAELQRNIICLNGENVAMREIMNKLISDWERNRVEIGDLQRKCADQVEEIK-LLNLEMPTSRKNLTEISNKIDKSMDNVDRKLLEMEANQNQLNYGEFAWKLDKFTDKMAHAKNGINTDIYSESFLTHKNSYKMCLSVNPDGFGDGKGTHLTVGFHLMKGEFDEILEWPFRYSVTLALINQRTRLPHVCKTTNCANNPNSKALIQP-TDRNGGMGFPQFVSHEELASNPDLMRNNQIFIKCSV 446
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000025794.1 (SMESG000025794.1) HSP 1 Score: 267.314 bits (682), Expect = 3.622e-84 Identity = 147/448 (32.81%), Postives = 256/448 (57.14%), Query Frame = 1 Query: 43 MANGKSENLTKIISNGVAENNHDSFEDDLCVICNNIPINLCSSLCGCKYCWDCIENYLNGKDKCCPGLLVDCENQILNIENDILLDQSLTSRISRVIVKYPEQAGQFSDDIKRIQNRIISIKSNPSDCPFSYIGCRNKQPIDEEIDDHLTNQNLSHSKLLIDSICSLKHELQSIKSEITNSKRENKKLKKEIEIMKFDSERKEALISDLLMNDRMKTEQIEYL------FQQLHQSDSDS-DETQYTHVDDKSEVSSVRTMXXXXXXXXXXXXXXKINDKLSRFDRQLWKIEDKLETVNFGEFVWIVKDFSQKINEARKSINTEFYSDSFFTHKNGYKMCLRVDPIGISFGKGSHLAIYFCLMQGPFDNILSWPMKFDVTFALIDQSTGYVHMCRTARFDDHPDNFAWNKPTTNKKIGYGYHKFIEIEELLKNPSIFQEDRIFIKCTV 1365 M+ K EN+ +I+ + E+ + D LC +C + +N + CGC++C+ CI ++L+ K+K CPG +C+ ++L++ +I +D + +IS++ VK E + + D+++++++ + K CP+S IGC +++ DHL ++ +H+KLL+D + + +E++ +K+ N+ L+ EI +K D ER+ I+DL + E+IE L + + ++ SD D Q ++ E+ ++ +KI+ DR+L ++ GEF+W + F+ K+ +A+ INT YS+SF THKNG+KMCLRVDP G GKG+HL+++F LM+G FD IL WP + VTFALI+Q T H+ +T + ++P++ A +P T++ G G+ KF+ EEL NP + + ++IFIKC+V Sbjct: 1 MSGSKLENVWQIMRDYNYESVTEIQNDMLCFLCKKLLVNARCAPCGCRFCFTCISDFLDHKEKICPGDTEECKQEMLHLNENICVDYPMNIKISKLQVKCKEMSCVYVDELRKMEDHSRTCKYRSVACPYSNIGCDKCNISQDKVTDHLQSEIFAHTKLLMDFVVNFNNEMEMLKANNNGLSAVNELLRNEINELKLDGERRRVEIADLQRKCADQAEEIELLNEDIPALRNVDRNVSDRLDGLQLIIEGNQKELIDKIGQMENKQKVDLTEMSNKIDKLSGNVDRKLLEMAANQNQRINGEFMWKLDKFTDKMADAKNGINTRIYSESFLTHKNGFKMCLRVDPDGNGGGKGTHLSVFFHLMKGEFDGILEWPFRHSVTFALINQRTRLPHVSKTVKCANYPNDKALIQP-TDRNAGLGFPKFVSHEELSSNPDLMRNNQIFIKCSV 447 The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TNF receptor-associated factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of TNF receptor-associated factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032686 ID=SMED30032686|Name=TNF receptor-associated factor|organism=Schmidtea mediterranea sexual|type=transcript|length=1457bpback to top protein sequence of SMED30032686-orf-1 >SMED30032686-orf-1 ID=SMED30032686-orf-1|Name=SMED30032686-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=446bp MANGKSENLTKIISNGVAENNHDSFEDDLCVICNNIPINLCSSLCGCKYCback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|