26S proteasome regulatory subunit 6A homolog

Overview


Name	26S proteasome regulatory subunit 6A homolog
Smed ID	SMED30032589
Length (bp)	1349

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of 26S proteasome regulatory subunit 6A homolog (SMED30032589) t-SNE clustered cells

Violin plots show distribution of expression levels for 26S proteasome regulatory subunit 6A homolog (SMED30032589) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 26S proteasome regulatory subunit 6A homolog (SMED30032589) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30032589

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
posterior side	SMED30032589	h1SMcG0004870	dd_Smed_v4_1855_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
posterior muscle cell	SMED30032589	h1SMcG0004870	dd_Smed_v4_1855_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

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Homology

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Human
Match: PSMC3 (proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549])

HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0
Identity = 343/425 (80.71%), Postives = 380/425 (89.41%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   16 KMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439

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Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   16 KMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Human
Match: PSMC3 (proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549])

HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0
Identity = 340/412 (82.52%), Postives = 376/412 (91.26%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   13 IGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 423

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Human
Match: PSMC3 (proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549])

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 306/376 (81.38%), Postives = 339/376 (90.16%), Query Frame = 1

Query:  181 KTQQDKIKENKSKIKLNKAL--PYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            + +QD I E   K+   + +    L+ + I+LLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   23 EAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKLLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 397

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Human
Match: PSMC3 (proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549])

HSP 1 Score: 497.278 bits (1279), Expect = 2.259e-176
Identity = 246/323 (76.16%), Postives = 275/323 (85.14%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDR 1035
            I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAME                     L+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDR
Sbjct:   11 IGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME---------------------LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 311

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
Match: rpt-5 (26S protease regulatory subunit 6A [Source:UniProtKB/Swiss-Prot;Acc:O76371])

HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0
Identity = 337/412 (81.80%), Postives = 373/412 (90.53%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            ID EI +MS ++L SR  LLDNEIRIM+SE+  ++H   T +++IKEN  +IK+NK LPYLVSNV+ELLD+E   + EE+G ++DLD+Q K KCAVIKTSTR TYFLP++GLV+P ELKPGDLVGVNKDSYLILEKLPAE+DSRVKAMEVDERP+EQYSDIGG DKQIQELIEAVVLPMTHKDRF  +GI PPKGVL+YGPPGTGKT++ARA AAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN DIKVIAATNR+D+LDPALLRSGRLDRKIE P PNE+ARARIMQIHSRKMNV KDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR A  ++HEDFMDAILEVQA+KK +LNYYA
Sbjct:   22 IDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLE--DNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
Match: rpt-2 (Probable 26S proteasome regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368])

HSP 1 Score: 340.502 bits (872), Expect = 2.534e-113
Identity = 158/311 (50.80%), Postives = 228/311 (73.31%), Query Frame = 1

Query:  349 AVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKK 1281
            A++ T+    +++ I+  V+  +L+PG  V +N  ++ ++  L  + D  V  M++++ P E Y+D+GGLD+QIQE+ EAV LP+TH + ++ +GI+PPKGV+LYG PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG K+VR+ F++A+E AP+I+FIDE+DA+GTKR+DS   G+RE+QRTMLELLNQLDGF    D+KV+ ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M + K+VN EE     D+ +GA  KA+C EAG++ALR    RV  EDF  +   V  RKK
Sbjct:  124 AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
Match: F56F11.4 (pep chromosome:WBcel235:III:2858558:2865497:1 gene:WBGene00018991.1 transcript:F56F11.4a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F56F11.4)

HSP 1 Score: 325.865 bits (834), Expect = 5.333e-108
Identity = 162/323 (50.15%), Postives = 223/323 (69.04%), Query Frame = 1

Query:  301 EDGGHI-DLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEV 1266
            E G H+ ++      K  ++K      Y + +   V+ S L  G  V +  D+Y I E LP++ D  V  M V++ P   Y  +GGLD QI+E+ E + LP+ H + F A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +  + GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFPAP+E+ARA+I++IHSRKMN+ + +  +++A      +GA+ K+VC EAGM ALR     V  EDF  A+ +V
Sbjct:   73 EQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKV 395

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
Match: F56F11.4 (pep chromosome:WBcel235:III:2858709:2865386:1 gene:WBGene00018991.1 transcript:F56F11.4a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F56F11.4)

HSP 1 Score: 325.865 bits (834), Expect = 5.333e-108
Identity = 162/323 (50.15%), Postives = 223/323 (69.04%), Query Frame = 1

Query:  301 EDGGHI-DLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEV 1266
            E G H+ ++      K  ++K      Y + +   V+ S L  G  V +  D+Y I E LP++ D  V  M V++ P   Y  +GGLD QI+E+ E + LP+ H + F A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +  + GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFPAP+E+ARA+I++IHSRKMN+ + +  +++A      +GA+ K+VC EAGM ALR     V  EDF  A+ +V
Sbjct:   73 EQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKV 395

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
Match: F56F11.4 (pep chromosome:WBcel235:III:2855554:2865386:1 gene:WBGene00018991.1 transcript:F56F11.4b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F56F11.4)

HSP 1 Score: 325.479 bits (833), Expect = 1.586e-107
Identity = 162/326 (49.69%), Postives = 224/326 (68.71%), Query Frame = 1

Query:  301 EDGGHI-DLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            E G H+ ++      K  ++K      Y + +   V+ S L  G  V +  D+Y I E LP++ D  V  M V++ P   Y  +GGLD QI+E+ E + LP+ H + F A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +  + GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFPAP+E+ARA+I++IHSRKMN+ + +  +++A      +GA+ K+VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   94 EQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQK 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
Match: Rpt5 (gene:FBgn0028684 transcript:FBtr0084452)

HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0
Identity = 341/409 (83.37%), Postives = 372/409 (90.95%), Query Frame = 1

Query:   76 EINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            E+ +MS DE+ SR RL+DNEI+IMKSE+  ++HE + Q +KIK+N  KIK+NK LPYLVSNVIELLDV+PQ +EE+DG    LD+QRKGKCAVIKTSTRQ YFLP+IGLV+  +LKPGDLVGVNKDSYLILE LPAE+D+RVKAMEVDERP+EQYSDIGGLDKQIQELIEAVVLPMTHK++FK +GI PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF    DIKVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVNFEEL+R TDDFNGAQCKAVCVEAGMIALRR A+ V HEDFMDAI+EVQA+KK  LNYYA
Sbjct:   21 EVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQ-EEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 428

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
Match: Rpt2 (gene:FBgn0015282 transcript:FBtr0084520)

HSP 1 Score: 352.829 bits (904), Expect = 5.836e-118
Identity = 176/380 (46.32%), Postives = 253/380 (66.58%), Query Frame = 1

Query:  142 IMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKK 1281
            +M+ E        K Q +K +E +SK+   +  P  V N+ E++D                D+      A++ TS    +++ I+  V+  +L+PG  V +N   + ++  L  + D  V  M++++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DA+GTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI  IH+ +M +A+DVN  EL    DD +GA  KA+C EAG++ALR    +V +EDF  +   V  RKK
Sbjct:   72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIID----------------DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
Match: Rpt2 (gene:FBgn0015282 transcript:FBtr0346154)

HSP 1 Score: 352.829 bits (904), Expect = 5.836e-118
Identity = 176/380 (46.32%), Postives = 253/380 (66.58%), Query Frame = 1

Query:  142 IMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKK 1281
            +M+ E        K Q +K +E +SK+   +  P  V N+ E++D                D+      A++ TS    +++ I+  V+  +L+PG  V +N   + ++  L  + D  V  M++++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DA+GTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI  IH+ +M +A+DVN  EL    DD +GA  KA+C EAG++ALR    +V +EDF  +   V  RKK
Sbjct:   72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIID----------------DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
Match: Rpt6 (gene:FBgn0020369 transcript:FBtr0077189)

HSP 1 Score: 324.324 bits (830), Expect = 2.075e-107
Identity = 156/291 (53.61%), Postives = 209/291 (71.82%), Query Frame = 1

Query:  403 VEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            ++ +++ P   V +  +SY + + LP + D  V  M V++ P   Y  +GGLDKQI+E+ E + LP+ H + F A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+GS++VR+ F +A+E AP+IIF+DE+D+IG+ R +S   GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILDPALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:  102 IDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 392

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
Match: Rpt6R (gene:FBgn0039788 transcript:FBtr0085680)

HSP 1 Score: 317.005 bits (811), Expect = 1.456e-104
Identity = 156/309 (50.49%), Postives = 212/309 (68.61%), Query Frame = 1

Query:  349 AVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
             ++K      Y + +   +   ++ P   V +  +SY + + LP + D  V  M V++ P   Y  +GGLDKQIQE+ E + LP+ H + F A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+GS++VR+ F +A+E AP+IIF+DE+D+IG+ R ++   GD EVQRTMLELLNQLDGF+   +IKVI ATNR+D+LD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   79 VLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLET-GTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMK 386

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666])

HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0
Identity = 341/412 (82.77%), Postives = 375/412 (91.02%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV  DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   17 IGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 427

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666])

HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0
Identity = 339/405 (83.70%), Postives = 371/405 (91.60%), Query Frame = 1

Query:   88 MSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV  DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:    1 MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 404

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
Match: psmc1a (proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730])

HSP 1 Score: 343.584 bits (880), Expect = 2.621e-114
Identity = 174/382 (45.55%), Postives = 250/382 (65.45%), Query Frame = 1

Query:  112 RIRLLDNE----IRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            R++LL  E      +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYG PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M VA DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   59 RLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
Match: psmc1b (proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69])

HSP 1 Score: 343.584 bits (880), Expect = 3.220e-114
Identity = 170/368 (46.20%), Postives = 246/368 (66.85%), Query Frame = 1

Query:  142 IMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYG PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M VA+DV+ ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547])

HSP 1 Score: 320.087 bits (819), Expect = 1.270e-105
Identity = 157/311 (50.48%), Postives = 214/311 (68.81%), Query Frame = 1

Query:  343 KCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            K  ++K      + + +   ++ +++ P   V +  DSY + + LP + D  V  M V++ P   Y  IGGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
Match: cd248 (CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999])

HSP 1 Score: 713.375 bits (1840), Expect = 0.000e+0
Identity = 341/417 (81.77%), Postives = 378/417 (90.65%), Query Frame = 1

Query:   52 TEIMDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            TE   +  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   25 TEADGLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 440

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
Match: cd248 (CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999])

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 319/391 (81.59%), Postives = 354/391 (90.54%), Query Frame = 1

Query:   43 SKMTEIMD-IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 1212
            +K  EI D +  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEA  +  R
Sbjct:    2 AKKQEIADGLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAVKVGCR 391

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
Match: cd248 (CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999])

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 301/352 (85.51%), Postives = 329/352 (93.47%), Query Frame = 1

Query:  247 LVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            L+ + I+LLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   33 LLDSEIKLLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 383

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
Match: psmc1 (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:733980])

HSP 1 Score: 345.125 bits (884), Expect = 6.340e-115
Identity = 170/368 (46.20%), Postives = 245/368 (66.58%), Query Frame = 1

Query:  142 IMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M +A DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   55 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 401

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
Match: psmc1 (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:733980])

HSP 1 Score: 345.125 bits (884), Expect = 9.854e-115
Identity = 170/368 (46.20%), Postives = 245/368 (66.58%), Query Frame = 1

Query:  142 IMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M +A DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
Match: Psmc3 (proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754])

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 343/425 (80.71%), Postives = 380/425 (89.41%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   19 KMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
Match: Psmc3 (proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754])

HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0
Identity = 324/413 (78.45%), Postives = 357/413 (86.44%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEV 1266
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEA   A         H D  D  L V
Sbjct:   19 KMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAMCWAA-----FTAHRDTCDPKLRV 425

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
Match: Psmc3 (proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754])

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 314/425 (73.88%), Postives = 346/425 (81.41%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+                                          LLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   19 KMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIK------------------------------------------LLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 400

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
Match: Psmc3 (proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754])

HSP 1 Score: 498.819 bits (1283), Expect = 2.757e-177
Identity = 240/294 (81.63%), Postives = 269/294 (91.50%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 948
            I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ
Sbjct:   13 IGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 305

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
Match: Psmc1 (protease (prosome, macropain) 26S subunit, ATPase 1 [Source:MGI Symbol;Acc:MGI:106054])

HSP 1 Score: 345.125 bits (884), Expect = 7.463e-115
Identity = 170/368 (46.20%), Postives = 245/368 (66.58%), Query Frame = 1

Query:  142 IMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M +A DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
Match: sp|Q63569|PRS6A_RAT (26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1)

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 343/425 (80.71%), Postives = 380/425 (89.41%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   16 KMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
Match: sp|O88685|PRS6A_MOUSE (26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2)

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 343/425 (80.71%), Postives = 380/425 (89.41%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   19 KMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
Match: sp|O42587|PR6AA_XENLA (26S proteasome regulatory subunit 6A-A OS=Xenopus laevis OX=8355 GN=psmc3-a PE=2 SV=2)

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 341/417 (81.77%), Postives = 378/417 (90.65%), Query Frame = 1

Query:   52 TEIMDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            TE   +  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:    8 TEADGLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 423

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
Match: sp|P17980|PRS6A_HUMAN (26S proteasome regulatory subunit 6A OS=Homo sapiens OX=9606 GN=PSMC3 PE=1 SV=3)

HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0
Identity = 343/425 (80.71%), Postives = 380/425 (89.41%), Query Frame = 1

Query:   46 KMTEIMD------IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            KM  + D      I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:   16 KMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
Match: sp|O42586|PR6AB_XENLA (26S proteasome regulatory subunit 6A-B OS=Xenopus laevis OX=8355 GN=psmc3-b PE=2 SV=1)

HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0
Identity = 335/405 (82.72%), Postives = 370/405 (91.36%), Query Frame = 1

Query:   88 MSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIG KRFDSEKAGDREVQRTMLELLNQLDGFQP   +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAG+IALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:    1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
Match: C1L5L4 (Proteasome (Prosome, macropain) 26S subunit, ATPase, 3 OS=Schistosoma japonicum OX=6182 GN=PSMC3 PE=2 SV=1)

HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0
Identity = 358/410 (87.32%), Postives = 389/410 (94.88%), Query Frame = 1

Query:   73 NEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +E+ +MS +EL+SR RLLD+EIR M+SEL HVSHE  T+Q K+K++KSKIK+NKALPYLV+ V+ELL+VEPQ DE E+G ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLV P ELKPGDLVGV+KDSYLILEKLP EFDSRVKAMEVDERP+E+YSDIGGLDKQIQELIEAVVLPMTH+DRF+A+GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEKAP IIFIDELDAIGTKRF+SEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGR+DRKIEFPAPNEEARARIMQIHSRKMNV KDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA  V HED+MDAILEVQA+K+T LNYYA
Sbjct:   19 DEVMRMSTEELTSRARLLDSEIRFMQSELKHVSHEINTKQTKVKDSKSKIKMNKALPYLVATVVELLNVEPQEDEVEEGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVPPEELKPGDLVGVHKDSYLILEKLPPEFDSRVKAMEVDERPTERYSDIGGLDKQIQELIEAVVLPMTHRDRFEALGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPAIIFIDELDAIGTKRFNSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRVDRKIEFPAPNEEARARIMQIHSRKMNVDKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGASEVTHEDYMDAILEVQAKKRTNLNYYA 428

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
Match: A0A4Z2D4S9 (26S proteasome regulatory subunit 6A isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_004558 PE=3 SV=1)

HSP 1 Score: 749.584 bits (1934), Expect = 0.000e+0
Identity = 358/410 (87.32%), Postives = 389/410 (94.88%), Query Frame = 1

Query:   73 NEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +E+ +MS +EL+SR RLLD+EIR M+SEL HVSHE  T+Q K+K++KSKIK+NKALPYLV+ V+ELL+VEPQ DE E+G ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLV P ELKPGDLVGV+KDSYLILEKLP EFDSRVKAMEVDERP+E+YSDIGGLDKQIQELIEAVVLPMTH+DRF+A+GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEKAP IIFIDELDAIGTKRF+SEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGR+DRKIEFPAPNEEARARIMQIHSRKMNV KDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA  V HED+MDAILEVQA+K+T LNYYA
Sbjct:   19 DEVMRMSTEELTSRARLLDSEIRFMQSELKHVSHEINTKQTKVKDSKSKIKMNKALPYLVATVVELLNVEPQEDEIEEGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVPPEELKPGDLVGVHKDSYLILEKLPPEFDSRVKAMEVDERPTERYSDIGGLDKQIQELIEAVVLPMTHRDRFEALGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPAIIFIDELDAIGTKRFNSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRVDRKIEFPAPNEEARARIMQIHSRKMNVDKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGASEVTHEDYMDAILEVQAKKRTNLNYYA 428

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
Match: T1FM20 (AAA domain-containing protein OS=Helobdella robusta OX=6412 GN=20209869 PE=3 SV=1)

HSP 1 Score: 748.814 bits (1932), Expect = 0.000e+0
Identity = 360/413 (87.17%), Postives = 385/413 (93.22%), Query Frame = 1

Query:   64 DIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +++ EI +MSNDEL SR RLLDNEI+IM+SE+  +SHE + Q+DKIKEN  KIK+NK LPYLVSNVIELLDV+PQ   EE+G +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+P +LKPGDLVGVNKDSYLILE LPAE+DSRVKAMEVDERP+EQYSDIGGLDKQIQELIEAVVLPMTHKDRF A+GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ NHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNV  DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+MDAILEVQA+KK  LNYYA
Sbjct:   10 NLEKEILRMSNDELVSRTRLLDNEIKIMRSEVMRISHELQAQKDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQDQAEEEGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPEQLKPGDLVGVNKDSYLILETLPAEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKDRFTALGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQSNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVNNDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMDAILEVQAKKKANLNYYA 422

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
Match: A0A3Q0KF02 (26S protease regulatory subunit 6a, putative OS=Schistosoma mansoni OX=6183 PE=3 SV=1)

HSP 1 Score: 748.429 bits (1931), Expect = 0.000e+0
Identity = 357/410 (87.07%), Postives = 388/410 (94.63%), Query Frame = 1

Query:   73 NEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +E+ +MS +EL+SR RLLD+EIR M+SEL HV+HE  T+Q K+K++KSKIK+NKALPYLV+ V+ELLDVEPQ DE E+G ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLV P ELKPGDLVGV+KDSYLILEKLP EFDSRVKAMEVDERP+E+YSDIGGLDKQIQELIEAVVLPMTH+DRF+A+GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEKAP IIFIDELDAIGTKRF+SEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGR+DRKIEFPAPNEEARARIMQIHSRKMNV KDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR A  V HED+MDAILEVQA+K+T LNYYA
Sbjct:    3 DEVMRMSTEELTSRARLLDSEIRFMQSELKHVNHEINTKQTKVKDSKSKIKMNKALPYLVATVVELLDVEPQEDEIEEGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVPPEELKPGDLVGVHKDSYLILEKLPPEFDSRVKAMEVDERPTERYSDIGGLDKQIQELIEAVVLPMTHRDRFEALGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPAIIFIDELDAIGTKRFNSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRVDRKIEFPAPNEEARARIMQIHSRKMNVQKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRSASEVTHEDYMDAILEVQAKKRTNLNYYA 412

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
Match: G4M0R9 (26S protease regulatory subunit 6a, putative OS=Schistosoma mansoni OX=6183 GN=Smp_042270.2 PE=3 SV=1)

HSP 1 Score: 748.429 bits (1931), Expect = 0.000e+0
Identity = 357/410 (87.07%), Postives = 388/410 (94.63%), Query Frame = 1

Query:   73 NEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +E+ +MS +EL+SR RLLD+EIR M+SEL HV+HE  T+Q K+K++KSKIK+NKALPYLV+ V+ELLDVEPQ DE E+G ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLV P ELKPGDLVGV+KDSYLILEKLP EFDSRVKAMEVDERP+E+YSDIGGLDKQIQELIEAVVLPMTH+DRF+A+GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAFQLAKEKAP IIFIDELDAIGTKRF+SEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGR+DRKIEFPAPNEEARARIMQIHSRKMNV KDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR A  V HED+MDAILEVQA+K+T LNYYA
Sbjct:   19 DEVMRMSTEELTSRARLLDSEIRFMQSELKHVNHEINTKQTKVKDSKSKIKMNKALPYLVATVVELLDVEPQEDEIEEGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVPPEELKPGDLVGVHKDSYLILEKLPPEFDSRVKAMEVDERPTERYSDIGGLDKQIQELIEAVVLPMTHRDRFEALGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPAIIFIDELDAIGTKRFNSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRVDRKIEFPAPNEEARARIMQIHSRKMNVQKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRSASEVTHEDYMDAILEVQAKKRTNLNYYA 428

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:103037375])

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 326/386 (84.46%), Postives = 357/386 (92.49%), Query Frame = 1

Query:  145 MKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            MKSE+  V+HE +  +DKIK+N  KIK+NK LPYLVSNVIELLDV+P  D+EEDG +IDLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KK  L YYA
Sbjct:    1 MKSEVLRVTHELQAMKDKIKDNTEKIKVNKTLPYLVSNVIELLDVDPN-DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 385

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
Match: psmc1a (26S proteasome regulatory subunit 4 [Source:NCBI gene;Acc:103036290])

HSP 1 Score: 346.665 bits (888), Expect = 1.343e-115
Identity = 175/382 (45.81%), Postives = 251/382 (65.71%), Query Frame = 1

Query:  112 RIRLLDNE----IRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            R++LL  E      +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M VA DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   59 RLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
Match: psmc1b (26S proteasome regulatory subunit 4-like [Source:NCBI gene;Acc:103037200])

HSP 1 Score: 346.665 bits (888), Expect = 2.864e-115
Identity = 176/382 (46.07%), Postives = 253/382 (66.23%), Query Frame = 1

Query:  112 RIRLLDNE----IRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            R++LL  E      +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                D+      A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M VA DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   79 RLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID----------------DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 439

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:103027731])

HSP 1 Score: 320.472 bits (820), Expect = 4.749e-106
Identity = 155/284 (54.58%), Postives = 202/284 (71.13%), Query Frame = 1

Query:  424 PGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            P   V +  DSY + + LP + D  V  M V++ P   Y  IGGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   91 PNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 374

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:103027731])

HSP 1 Score: 320.087 bits (819), Expect = 7.647e-106
Identity = 155/287 (54.01%), Postives = 204/287 (71.08%), Query Frame = 1

Query:  415 ELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            ++ P   V +  DSY + + LP + D  V  M V++ P   Y  IGGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   88 KVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 374

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010299.1 (pep scaffold:Pmarinus_7.0:GL479893:343:6144:1 gene:ENSPMAG00000009320.1 transcript:ENSPMAT00000010299.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 341/412 (82.77%), Postives = 374/412 (90.78%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            I  EI +M  +E+  R RLLDNEI+IMKSE   ++HE    ++KIKEN  KIK+NK LPYLVSNVIELLDV+P  ++EEDG ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSD+GGLDKQIQEL+EA+VLPMTHK+RF+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+MD ILEVQA+KK  L YYA
Sbjct:    5 IAEEILKMGTEEIIQRTRLLDNEIKIMKSETMRINHELTAMKEKIKENTEKIKVNKTLPYLVSNVIELLDVDPT-EQEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDVGGLDKQIQELVEAIVLPMTHKERFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMDGILEVQAKKKANLQYYA 415

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547])

HSP 1 Score: 325.479 bits (833), Expect = 1.941e-108
Identity = 160/311 (51.45%), Postives = 216/311 (69.45%), Query Frame = 1

Query:  343 KCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            K  ++K      + + I   ++ +++ P   V +  DSY + + LP + D  V  M V++ P   Y  IGGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+GS++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILDPALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   87 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 397

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001244.1 (pep scaffold:Pmarinus_7.0:GL482260:6416:9764:-1 gene:ENSPMAG00000001115.1 transcript:ENSPMAT00000001244.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 301.597 bits (771), Expect = 1.250e-98
Identity = 145/288 (50.35%), Postives = 204/288 (70.83%), Query Frame = 1

Query:  403 VEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEV 1266
            V P++++ G  VGV+++ Y I   LP + D  V  M+V+E+P   YSD+GG  +QI++L E V  P+ H +RF  +GI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G+++VR+ F++A++    +IF DE+DAIG  RFD    GD EVQRTMLEL+NQLDGF P  +IKV+ ATNR D LDPAL+R GRLDRKIEF  P+ E R  I +IH+R M+V +D+ FE LAR   +  GA+ ++VC EAGM A+R        +DF++A+ +V
Sbjct:  139 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARKAC--LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKV 424

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006168.1 (pep scaffold:Pmarinus_7.0:GL486395:211235:217029:-1 gene:ENSPMAG00000005566.1 transcript:ENSPMAT00000006168.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 283.108 bits (723), Expect = 4.761e-93
Identity = 132/263 (50.19%), Postives = 185/263 (70.34%), Query Frame = 1

Query:  346 CAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEE 1134
              ++ ++T   Y++ I+  ++   LKP   V ++K S  +++ LP E DS +  +  D++P   Y DIGG+D Q QE+ EAV LP+TH D +K IGI PP+GVL+YGPPG GKT+LA+A A  T + F+++ G + VQ ++G+G ++VRD F+LAKE AP IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF    ++KVI ATNR D LDPALLR GRLDRKIEFP P+   +  I    + KMN++++V+ E+
Sbjct:   55 TGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSITMLTADQKPDVTYVDIGGMDIQKQEVREAVELPLTHFDLYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTVTAKMNLSEEVDLED 317

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
Match: vcp (valosin containing protein [Source:NCBI gene;Acc:327197])

HSP 1 Score: 199.134 bits (505), Expect = 3.621e-59
Identity = 97/233 (41.63%), Postives = 148/233 (63.52%), Query Frame = 1

Query:  514 VDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 1212
            V E P+  + DIGGL+   +EL E V  P+ H ++F   G+ P KGVL YGPPG GKTLLA+A A + ++ F+ + GP+L+ M+ G+    VRD F  A++ +PT++F+DELD+I   R      G     R + ++L ++DG   N ++ +I ATNR DI+DPA+LR GRLD+ I  P P+E++R  I++ + RK  +AKDV+   L++ T+ F+GA    +C  A  +A+R
Sbjct:  108 VVEVPNVTWEDIGGLESVKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQASPTVLFLDELDSIAKARGGGVGDGGGAADRVINQILTEMDGMGVNKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRTAILKANLRKSPIAKDVDIGYLSKTTNGFSGADLMEICQRACKLAIR 340

HSP 2 Score: 55.8398 bits (133), Expect = 9.181e-9
Identity = 26/74 (35.14%), Postives = 44/74 (59.46%), Query Frame = 1

Query: 1021 GRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHED 1242
            GR DR+++   P+   R  I+QIH++ M ++ DV+ E++A  T    GA   A+C EA + A+R+  D +  +D
Sbjct:    1 GRFDREVDIGIPDSTGRLEILQIHTKNMKLSVDVDLEQIANQTHGHVGADLAALCSEAALQAIRKKMDVIDLDD 74

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
Match: RPT5 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription; similar to human TBP1 [Source:SGD;Acc:S000005643])

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 288/418 (68.90%), Postives = 350/418 (83.73%), Query Frame = 1

Query:   64 DIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEED-----GGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            ++D EI  +S  EL +R +LLDNEIRI +SEL  +SHE     +KIK+NK KIK N+ LPYLV+NV+E++D+    D+E       GG+++LD+   GK AV+KTS+RQT FLP++GLV+P +LKP DLVGVNKDSYLIL+ LP+EFDSRVKAMEVDE+P+E YSD+GGLDKQI+EL+EA+VLPM   D+FK +GI+ PKG L+YGPPGTGKTLLARACAAQT +TFLKLA PQLVQM+IG+G+KLVRDAF LAKEKAPTIIFIDELDAIGTKRFDSEK+GDREVQRTMLELLNQLDGF  +  +KV+AATNRVD+LDPALLRSGRLDRKIEFP P+E++RA+I+QIHSRKM    D+N++ELAR TD+FNGAQ KAV VEAGMIALR G   V HEDF++ I EVQARK  ++++YA
Sbjct:   17 ELDQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA 434

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
Match: RPT2 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle; N-myristoylation of Rpt2p at Gly2 is involved in regulating the proper intracellular distribution of proteasome activity by controlling the nuclear localization of the 26S proteasome [Source:SGD;Acc:S000002165])

HSP 1 Score: 323.939 bits (829), Expect = 1.384e-107
Identity = 153/302 (50.66%), Postives = 217/302 (71.85%), Query Frame = 1

Query:  349 AVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDA 1254
            A++ + T   Y++ I+  V+   L+PG  V ++  +  I+  L  + D  V  M++D+ P+E YSDIGGL+ QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYG PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG +L R  F++A E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATN+++ LDPAL+R GR+DRKI F  P+   + +I+ IH+ KMN+++DVN E L    DD +GA  +A+C EAG++ALR    +V  EDF  A
Sbjct:  118 AIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQA 419

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
Match: RPT6 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003016])

HSP 1 Score: 309.301 bits (791), Expect = 2.775e-102
Identity = 152/315 (48.25%), Postives = 213/315 (67.62%), Query Frame = 1

Query:  343 KCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTT 1287
            K  ++K      Y + +   +   +LK    V +  DSY++ + L  + D  V  M V++ P   Y  +GGL KQI+E+ E + LP+ H + F+++GI  PKGV+LYGPPGTGKTLLARA A  T   F++++G +LVQ +IG+GS++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+ + +IK+I ATNR+DILDPALLR GR+DRKIEFP P+  ARA I++IHSRKMN+ + +N  ++A   +  +GA  K VC EAGM ALR     V  EDF  A+ +V  + + T
Sbjct:   82 KKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQET 396

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
Match: RPT1 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance [Source:SGD;Acc:S000001628])

HSP 1 Score: 297.745 bits (761), Expect = 5.348e-97
Identity = 143/295 (48.47%), Postives = 202/295 (68.47%), Query Frame = 1

Query:  391 IIGL---VEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEV 1266
            ++GL   V P++++ G  VGV++  Y I   LP   D  V  M V+E+P   YSD+GG   QI++L E V LP+   +RF  +GI PPKG+LLYGPPGTGKTL ARA A +T +TF+++ G +LVQ ++G+G+++VR+ F++A+ K   IIF DE+DA+G  RFD    GD EVQRTMLEL+ QLDGF P  +IKV+ ATNR + LDPALLR GR+DRK+EF  P+ E RA I +IHS+ M+V + + +E ++R   +  GA+ ++VC EAGM A+R        +DF+ A+ +V
Sbjct:  156 VVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 450

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
Match: RPT3 (ATPase of the 19S regulatory particle of the 26S proteasome; one of ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B [Source:SGD;Acc:S000002802])

HSP 1 Score: 283.493 bits (724), Expect = 6.166e-92
Identity = 146/388 (37.63%), Postives = 238/388 (61.34%), Query Frame = 1

Query:   94 NDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARAR-IMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDA 1254
            N ++  +++ L+ E  ++  +  ++  E +  + ++K  + ++K  +++P ++   +E +D                  Q  G   ++ ++T  +Y + I+  ++   LKP   V +++ S  +++ LP + DS +  M  +E+P   Y+D+GGLD Q QE+ EAV LP+   D ++ IGI PP+GVLLYGPPGTGKT+L +A A  TK+ F+++ G + V  ++G+G ++VRD F+LA+E AP+IIFIDE+D+I TKRFD++   DREVQR ++ELL Q+DGF  + ++KVI ATNR D LDPALLR GRLDRKIEFP+  +    R I    + KM++A + + + L    D  +GA   A+  EAG+ A+R+    ++  D  +A
Sbjct:   44 NSDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPID------------------QNTG---IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
Match: EDO37502 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFP4])

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 339/413 (82.08%), Postives = 373/413 (90.31%), Query Frame = 1

Query:   64 DIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            ++  E+ +MS DE+ SR RLLDNEI+IMKSE+  +SHE +  ++KIKEN  KIK+NK LPYLVSNVIELLDV+PQ   EEDG ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLVEP  L PGDLVGVNKDSYLILEKLPAE+DSRVKAMEVDERP+EQYSDIGGLD+QIQEL+EA+VLPMTHKDRF+ +GI PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF  +HDIKVIAATNRVDILDPALLRSGRLDRKIEFP P++EARARI+QIHSRKMNV+ DVNF+EL+RCTDDFNGA  KAVCVEAGMIALRR A  V HED+MD I+EV A+KK  L YYA
Sbjct:   16 EMGEEVLRMSTDEIVSRARLLDNEIKIMKSEIMRISHEQQAMKEKIKENSEKIKVNKTLPYLVSNVIELLDVDPQDYAEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQELVEAIVLPMTHKDRFENLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRREATEVCHEDYMDGIMEVNAKKKANLVYYA 428

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
Match: EDO49524 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGH4])

HSP 1 Score: 323.553 bits (828), Expect = 1.366e-107
Identity = 158/311 (50.80%), Postives = 216/311 (69.45%), Query Frame = 1

Query:  343 KCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            K  ++K      + + I   ++ +E+ P   V +  DSY + + LP + D  V  M V++ P   Y  +GGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N +++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   75 KKVLVKVHPEGKFVVDIDKGIDMAEVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARQDILKIHSRKMNLTRGINLKKIAELMPGASGAEIKGVCTEAGMYALRERRVHVTQEDFEMAVTKVMQK 385

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
Match: EDO43481 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYL2])

HSP 1 Score: 310.457 bits (794), Expect = 3.972e-102
Identity = 157/383 (40.99%), Postives = 241/383 (62.92%), Query Frame = 1

Query:   97 DELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            D+L    + L+ ++  ++ +  ++  E K  + ++   + ++K  +++P ++   +E +D                  Q  G   ++ ++T   Y++ I+  ++   LKP   V ++K S  +++ LP E DS +  +  +E+P+  Y++IGG+D Q QE+ EAV LP+TH + +K IGI PP+GVLLYGPPG GKT+LA+A A  T + F+++ G + VQ ++G+G ++VRD F+LAKE AP IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N ++KVI ATNR D LDPALLR GRLDRKIEFP P+   +  I    + KMN++++V+ E+     D  +GA   AVC EAGM A+R     ++ +DF
Sbjct:   37 DDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEAVD------------------QNTG---IVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLEDYVARPDKISGADINAVCQEAGMQAVRENRYIILAKDF 398

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
Match: EDO37473 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFJ3])

HSP 1 Score: 306.605 bits (784), Expect = 2.140e-100
Identity = 146/288 (50.69%), Postives = 204/288 (70.83%), Query Frame = 1

Query:  403 VEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEV 1266
            V P++++ G  VGV+++ Y I   LP + D  V  M+V+E+P   YSDIGG  +QI +L E V  P+ H +RF  +GI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G+++VR+ F++A+ K   I+F DE+DAIG  RFD    GD EVQRTMLEL+NQLDGF P  +IKV+ ATNR D LDPAL+R GRLDRK+EF  P+ E RA I +IH+R M+V +D+ +E LAR   +  GA+ ++VC EAGM A+R        +DF++A+ +V
Sbjct:  130 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRAHIFKIHARSMSVERDIRYELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKV 417

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
Match: EDO34160 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ60])

HSP 1 Score: 291.967 bits (746), Expect = 2.349e-95
Identity = 145/317 (45.74%), Postives = 210/317 (66.25%), Query Frame = 1

Query:  352 VIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKK--TTLNY 1296
            ++K +    Y +     V+ ++LK G  V ++  +  I+  LP E D  V  M  ++  +  YSD+GGL +QI+EL E + LP+T+ + F+ +GI PPKG LL+GPPGTGKTLLARA A+Q  + FLK+    +V  +IG+ ++L+R+ F  A++  P IIF+DE+DAIG +RF    + DRE+QRT++ELLNQ+DGF     +K+I ATNR D LDPALLR GRLDRKIE   PNE+AR  I++IHS ++    ++++E + + +D FNGA  + VC EAGM A+R   D V+ EDFM A+ +V   KK  + L+Y
Sbjct:   72 IVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFGYARDHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDVLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIALPNEQARMDILKIHSSRITKHGEIDYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEEDFMKAVRKVSDNKKLESKLDY 388

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:100301600])

HSP 1 Score: 712.99 bits (1839), Expect = 0.000e+0
Identity = 340/412 (82.52%), Postives = 377/412 (91.50%), Query Frame = 1

Query:   67 IDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            I  E+ +MS +E+  R RLLD+EI+IMKSE+  V+HE +  +DKIKEN  KIK+NK LPYLVSNVIELLDV+P  D+EEDG ++DLDSQRKGKCAVIKTSTRQTYFLP+IGLV+  +LKPGDLVGVNKDSYLILE LP E+DSRVKAMEVDERP+EQYSDIGGLDKQIQEL+EA+VLPM HK++F+ +GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG+KLVRDAF LAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN  +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNV+ DVN+EELARCTDDFNGAQCKAVCVEAGMIALRRGA  + HED+M+ ILEVQA+KKT L YYA
Sbjct:   17 IGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDP-NDQEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKTNLQYYA 427

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BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
Match: psmc1a (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:101161360])

HSP 1 Score: 347.051 bits (889), Expect = 1.194e-115
Identity = 175/382 (45.81%), Postives = 251/382 (65.71%), Query Frame = 1

Query:  112 RIRLLDNE----IRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDF 1245
            R++LL  E      +M+ E      + K  ++K +E +SK+   +  P  V  + E++D                        A++ TS    +++ I+  V+   L+PG  V +N   + ++  L  + D  V  M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH + ++ +GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F++A+E AP+I+FIDE+DAIGTKR+DS   G+RE+QRTMLELLNQLDGF    D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+ + RI QIH+ +M VA DV  ++L    DD +GA  KA+C EAG++ALR    +V +EDF
Sbjct:   62 RLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID---------------------DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 422

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:101158979])

HSP 1 Score: 320.472 bits (820), Expect = 6.840e-106
Identity = 157/311 (50.48%), Postives = 214/311 (68.81%), Query Frame = 1

Query:  343 KCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            K  ++K      + + +   ++ +++ P   V +  DSY + + LP + D  V  M V++ P   Y  IGGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   75 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 385

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:101158979])

HSP 1 Score: 320.087 bits (819), Expect = 1.070e-105
Identity = 157/311 (50.48%), Postives = 214/311 (68.81%), Query Frame = 1

Query:  343 KCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQAR 1275
            K  ++K      + + +   ++ +++ P   V +  DSY + + LP + D  V  M V++ P   Y  IGGLDKQI+E+ E + LP+ H + F+A+GI  PKGVLLYGPPGTGKTLLARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +    GD EVQRTMLELLNQLDGF+   +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR  I++IHSRKMN+ + +N  ++A      +GA+ K VC EAGM ALR     V  EDF  A+ +V  +
Sbjct:   83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:NCBI gene;Acc:101162317])

HSP 1 Score: 317.39 bits (812), Expect = 1.939e-104
Identity = 159/401 (39.65%), Postives = 246/401 (61.35%), Query Frame = 1

Query:   97 DELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYY 1299
            ++L SR + L  E+  ++ +  ++  E K  + +    + ++K  +++P ++   +E +D                        A++ ++T   Y++ I+  ++   LKP   V ++K S  +++ LP E DS +  +  D++P   Y+DIGG+D Q QE+ EAV LP+TH + +K IGI PP+GVL+YGPPG GKT+LA+A A  T + F+++ G + VQ ++G+G ++VRD F+LAKE AP IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N ++KVI ATNR D LDPALLR GRLDRKIEFP P+   +  +    + KMN++++V+ E+     D  +GA   ++C EAGM+A+R     V+ +DF  A   V  + +    +Y
Sbjct:   37 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD---------------------QNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 416

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST
Match: SMESG000005152.1 (SMESG000005152.1)

HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0
Identity = 417/418 (99.76%), Postives = 418/418 (100.00%), Query Frame = 1

Query:   49 MTEIMDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            MTEIMDIDNE+NQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA
Sbjct:    1 MTEIMDIDNEVNQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 418

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST
Match: SMESG000005152.1 (SMESG000005152.1)

HSP 1 Score: 846.269 bits (2185), Expect = 0.000e+0
Identity = 413/414 (99.76%), Postives = 414/414 (100.00%), Query Frame = 1

Query:   61 MDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            MDIDNE+NQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA
Sbjct:    1 MDIDNEVNQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 414

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST
Match: SMESG000008674.1 (SMESG000008674.1)

HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0
Identity = 300/417 (71.94%), Postives = 358/417 (85.85%), Query Frame = 1

Query:   52 TEIMDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +E M+ID EI  +S  +L  R+++LDNEI IM SE+     E K + + I   K  I+  K  P+LVS ++E+L++EP  +E EDG +++LDS+  GKC VIKTS R+T FLP  GL++  EL PGD+V VNKDS++++EKLP+E D RVKAME+DE+P+E+YSDIGGLD QIQELIEAVVLP+ HKD+FKAIGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TF+KLAGPQLVQM+IGDG+KLVRDAF+LAK+KAPTIIFIDELDAIGTKRFD+EK+GDREVQRTMLELLNQLDGFQPN DIKVIAATNR+D LDPALLRSGR+DRKIEFPAPNEEARARIMQIH+R MNV+K VNFEEL+R T+DFNGAQCKAVCVEAGMIALR G+  +VHEDF+DAILEV ++KK TLNY+ 
Sbjct:    3 SEHMEIDEEILNLSPRDLEFRLQMLDNEISIMNSEIRQNKFELKEKLENINSIKKMIEKQKVAPFLVSTIVEILNIEPDEEECEDGANVNLDSKTSGKCVVIKTSNRKTIFLPNTGLIDCEELNPGDVVAVNKDSFILIEKLPSEIDPRVKAMEIDEKPTEKYSDIGGLDSQIQELIEAVVLPVIHKDQFKAIGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFIKLAGPQLVQMYIGDGAKLVRDAFELAKQKAPTIIFIDELDAIGTKRFDNEKSGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDTLDPALLRSGRIDRKIEFPAPNEEARARIMQIHARNMNVSKAVNFEELSRSTEDFNGAQCKAVCVEAGMIALRNGSKEIVHEDFIDAILEVSSKKKPTLNYFG 419

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST
Match: SMESG000008702.1 (SMESG000008702.1)

HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0
Identity = 299/417 (71.70%), Postives = 356/417 (85.37%), Query Frame = 1

Query:   52 TEIMDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDKIKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            +E M+ID EI  +S   L  R+++LDNEI IM SE+     E K + + I   K  I+  K  P+LVS ++E+L++EP  +E EDG +++LDS+  GKC VIKTS R+T FLP  GL++  EL PGD+V VNKDS++++EKLP+E D RVKAME+DE+P+E+YSDIGGLD QIQELIEAVVLP+ HKD+FKAIGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TF+KLAGPQLVQM+IGDG+KLVRDAF+LAK+KAPTIIFIDELDAIGTKRFD+EK+GDREVQRTMLELLNQLDGFQPN DIKVIAATNR+D LDPALLRSGR+DRKIEFPAPNEEARARIMQIH+R MNV+K VNFEEL+R T+DFNGAQCKAVCVEAGMIA R G+  +VHEDF+DAILEV ++KK TLNY+ 
Sbjct:    3 SEHMEIDEEILNLSPRNLEFRLQMLDNEISIMNSEIRQNKFELKEKLENINSIKKMIEKQKVAPFLVSTIVEILNIEPDEEECEDGANVNLDSKTSGKCVVIKTSNRKTIFLPNTGLIDCEELNPGDVVAVNKDSFILIEKLPSEIDPRVKAMEIDEKPTEKYSDIGGLDSQIQELIEAVVLPVIHKDQFKAIGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFIKLAGPQLVQMYIGDGAKLVRDAFELAKQKAPTIIFIDELDAIGTKRFDNEKSGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDTLDPALLRSGRIDRKIEFPAPNEEARARIMQIHARNMNVSKAVNFEELSRSTEDFNGAQCKAVCVEAGMIAFRNGSKEIVHEDFIDAILEVSSKKKPTLNYFG 419

[Close]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST
Match: SMESG000008674.1 (SMESG000008674.1)

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 278/361 (77.01%), Postives = 326/361 (90.30%), Query Frame = 1

Query:  220 IKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKCAVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSRVKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDAFQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSRKMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFMDAILEVQARKKTTLNYYA 1302
            I+  K  P+LVS ++E+L++EP  +E EDG +++LDS+  GKC VIKTS R+T FLP  GL++  EL PGD+V VNKDS++++EKLP+E D RVKAME+DE+P+E+YSDIGGLD QIQELIEAVVLP+ HKD+FKAIGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TF+KLAGPQLVQM+IGDG+KLVRDAF+LAK+KAPTIIFIDELDAIGTKRFD+EK+GDREVQRTMLELLNQLDGFQPN DIKVIAATNR+D LDPALLRSGR+DRKIEFPAPNEEARARIMQIH+R MNV+K VNFEEL+R T+DFNGAQCKAVCVEAGMIALR G+  +VHEDF+DAILEV ++KK TLNY+ 
Sbjct:    2 IEKQKVAPFLVSTIVEILNIEPDEEECEDGANVNLDSKTSGKCVVIKTSNRKTIFLPNTGLIDCEELNPGDVVAVNKDSFILIEKLPSEIDPRVKAMEIDEKPTEKYSDIGGLDSQIQELIEAVVLPVIHKDQFKAIGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFIKLAGPQLVQMYIGDGAKLVRDAFELAKQKAPTIIFIDELDAIGTKRFDNEKSGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDTLDPALLRSGRIDRKIEFPAPNEEARARIMQIHARNMNVSKAVNFEELSRSTEDFNGAQCKAVCVEAGMIALRNGSKEIVHEDFIDAILEVSSKKKPTLNYFG 362

The following BLAST results are available for this feature:

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Human
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PSMC3	0.000e+0	80.71	proteasome 26S subunit, ATPase 3 [Source:HGNC Symb...	[more]
PSMC3	0.000e+0	80.71	proteasome 26S subunit, ATPase 3 [Source:HGNC Symb...	[more]
PSMC3	0.000e+0	82.52	proteasome 26S subunit, ATPase 3 [Source:HGNC Symb...	[more]
PSMC3	0.000e+0	81.38	proteasome 26S subunit, ATPase 3 [Source:HGNC Symb...	[more]
PSMC3	2.259e-176	76.16	proteasome 26S subunit, ATPase 3 [Source:HGNC Symb...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rpt-5	0.000e+0	81.80	26S protease regulatory subunit 6A [Source:UniPro...	[more]
rpt-2	2.534e-113	50.80	Probable 26S proteasome regulatory subunit 4 [Sou...	[more]
F56F11.4	5.333e-108	50.15	pep chromosome:WBcel235:III:2858558:2865497:1 gene...	[more]
F56F11.4	5.333e-108	50.15	pep chromosome:WBcel235:III:2858709:2865386:1 gene...	[more]
F56F11.4	1.586e-107	49.69	pep chromosome:WBcel235:III:2855554:2865386:1 gene...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rpt5	0.000e+0	83.37	gene:FBgn0028684 transcript:FBtr0084452	[more]
Rpt2	5.836e-118	46.32	gene:FBgn0015282 transcript:FBtr0084520	[more]
Rpt2	5.836e-118	46.32	gene:FBgn0015282 transcript:FBtr0346154	[more]
Rpt6	2.075e-107	53.61	gene:FBgn0020369 transcript:FBtr0077189	[more]
Rpt6R	1.456e-104	50.49	gene:FBgn0039788 transcript:FBtr0085680	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc3	0.000e+0	82.77	proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:...	[more]
psmc3	0.000e+0	83.70	proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:...	[more]
psmc1a	2.621e-114	45.55	proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc...	[more]
psmc1b	3.220e-114	46.20	proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc...	[more]
psmc5	1.270e-105	50.48	proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cd248	0.000e+0	81.77	CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999]	[more]
cd248	0.000e+0	81.59	CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999]	[more]
cd248	0.000e+0	85.51	CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999]	[more]
psmc1	6.340e-115	46.20	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
psmc1	9.854e-115	46.20	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Psmc3	0.000e+0	80.71	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc3	0.000e+0	78.45	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc3	0.000e+0	73.88	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc3	2.757e-177	81.63	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc1	7.463e-115	46.20	protease (prosome, macropain) 26S subunit, ATPase ...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q63569\|PRS6A_RAT	0.000e+0	80.71	26S proteasome regulatory subunit 6A OS=Rattus nor...	[more]
sp\|O88685\|PRS6A_MOUSE	0.000e+0	80.71	26S proteasome regulatory subunit 6A OS=Mus muscul...	[more]
sp\|O42587\|PR6AA_XENLA	0.000e+0	81.77	26S proteasome regulatory subunit 6A-A OS=Xenopus ...	[more]
sp\|P17980\|PRS6A_HUMAN	0.000e+0	80.71	26S proteasome regulatory subunit 6A OS=Homo sapie...	[more]
sp\|O42586\|PR6AB_XENLA	0.000e+0	82.72	26S proteasome regulatory subunit 6A-B OS=Xenopus ...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
C1L5L4	0.000e+0	87.32	Proteasome (Prosome, macropain) 26S subunit, ATPas...	[more]
A0A4Z2D4S9	0.000e+0	87.32	26S proteasome regulatory subunit 6A isoform 1 OS=...	[more]
T1FM20	0.000e+0	87.17	AAA domain-containing protein OS=Helobdella robust...	[more]
A0A3Q0KF02	0.000e+0	87.07	26S protease regulatory subunit 6a, putative OS=Sc...	[more]
G4M0R9	0.000e+0	87.07	26S protease regulatory subunit 6a, putative OS=Sc...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc3	0.000e+0	84.46	proteasome 26S subunit, ATPase 3 [Source:NCBI gene...	[more]
psmc1a	1.343e-115	45.81	26S proteasome regulatory subunit 4 [Source:NCBI g...	[more]
psmc1b	2.864e-115	46.07	26S proteasome regulatory subunit 4-like [Source:N...	[more]
psmc5	4.749e-106	54.58	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc5	7.647e-106	54.01	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000010299.1	0.000e+0	82.77	pep scaffold:Pmarinus_7.0:GL479893:343:6144:1 gene...	[more]
psmc5	1.941e-108	51.45	proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:...	[more]
ENSPMAT00000001244.1	1.250e-98	50.35	pep scaffold:Pmarinus_7.0:GL482260:6416:9764:-1 ge...	[more]
ENSPMAT00000006168.1	4.761e-93	50.19	pep scaffold:Pmarinus_7.0:GL486395:211235:217029:-...	[more]
vcp	3.621e-59	41.63	valosin containing protein [Source:NCBI gene;Acc:3...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RPT5	0.000e+0	68.90	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT2	1.384e-107	50.66	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT6	2.775e-102	48.25	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT1	5.348e-97	48.47	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT3	6.166e-92	37.63	ATPase of the 19S regulatory particle of the 26S p...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO37502	0.000e+0	82.08	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49524	1.366e-107	50.80	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO43481	3.972e-102	40.99	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37473	2.140e-100	50.69	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34160	2.349e-95	45.74	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc3	0.000e+0	82.52	proteasome 26S subunit, ATPase 3 [Source:NCBI gene...	[more]
psmc1a	1.194e-115	45.81	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
psmc5	6.840e-106	50.48	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc5	1.070e-105	50.48	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc4	1.939e-104	39.65	proteasome 26S subunit, ATPase 4 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 6A homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000005152.1	0.000e+0	99.76	SMESG000005152.1	[more]
SMESG000005152.1	0.000e+0	99.76	SMESG000005152.1	[more]
SMESG000008674.1	0.000e+0	71.94	SMESG000008674.1	[more]
SMESG000008702.1	0.000e+0	71.70	SMESG000008702.1	[more]
SMESG000008674.1	0.000e+0	77.01	SMESG000008674.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30032589 ID=SMED30032589|Name=26S proteasome regulatory subunit 6A homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1349bp
AATTACTCGTCTTTTGAAGTATTTAAATAATTTTTAACATTCAGCAAAAT
GACAGAAATTATGGATATTGACAACGAGATAAATCAAATGAGCAATGATG
AACTATCCAGTCGTATTAGACTTTTAGATAATGAAATAAGAATTATGAAA
TCTGAATTAACGCATGTGAGCCATGAAACCAAAACTCAGCAAGACAAAAT
AAAAGAAAATAAGAGCAAAATAAAATTGAATAAAGCATTACCCTATCTGG
TCTCAAATGTCATTGAATTATTAGATGTGGAACCTCAGGGAGATGAAGAA
GAAGACGGTGGTCATATTGATTTAGATTCTCAAAGAAAAGGGAAATGCGC
TGTTATTAAAACAAGCACTAGGCAAACTTATTTTCTTCCAATTATTGGAT
TAGTAGAACCAAGTGAATTGAAGCCCGGAGATTTAGTTGGAGTAAATAAA
GATTCGTATTTAATTCTTGAAAAACTTCCAGCTGAGTTTGATTCCCGTGT
CAAAGCAATGGAAGTAGATGAGAGACCATCTGAACAATACAGTGACATTG
GTGGATTGGATAAGCAAATCCAAGAACTTATTGAAGCAGTAGTATTACCA
ATGACACATAAAGATAGATTCAAAGCTATTGGAATTCAGCCCCCAAAAGG
GGTTTTACTTTATGGTCCTCCAGGAACAGGAAAAACCTTATTGGCAAGAG
CATGTGCTGCTCAAACTAAATCAACTTTTTTAAAATTAGCTGGCCCTCAA
TTAGTACAAATGTTTATAGGAGACGGTTCAAAATTAGTTAGAGATGCATT
TCAATTAGCGAAGGAAAAAGCTCCAACAATTATTTTTATTGACGAATTGG
ATGCAATTGGTACGAAAAGGTTTGACAGCGAGAAAGCTGGAGATCGAGAA
GTTCAACGAACAATGTTGGAATTATTAAATCAATTGGATGGGTTTCAACC
AAATCATGATATCAAAGTAATTGCTGCGACTAATCGCGTTGATATTCTTG
ATCCCGCATTATTGAGAAGTGGTAGGCTGGATAGAAAAATCGAATTTCCT
GCTCCTAATGAAGAAGCAAGAGCAAGAATTATGCAAATACATTCTCGTAA
AATGAATGTAGCTAAAGATGTAAATTTTGAAGAGCTTGCTCGTTGTACCG
ATGATTTTAATGGGGCACAGTGCAAAGCTGTATGTGTTGAAGCTGGTATG
ATTGCTTTACGACGTGGTGCTGACCGAGTTGTTCATGAAGATTTTATGGA
CGCAATACTAGAAGTACAAGCCAGAAAGAAAACCACGCTTAACTATTATG
CTTAAATTCGTTTGTTAATAATAAATAATTTTAAAACTTCAAAAAAAGT

protein sequence of SMED30032589-orf-1

>SMED30032589-orf-1 ID=SMED30032589-orf-1|Name=SMED30032589-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=419bp
MTEIMDIDNEINQMSNDELSSRIRLLDNEIRIMKSELTHVSHETKTQQDK
IKENKSKIKLNKALPYLVSNVIELLDVEPQGDEEEDGGHIDLDSQRKGKC
AVIKTSTRQTYFLPIIGLVEPSELKPGDLVGVNKDSYLILEKLPAEFDSR
VKAMEVDERPSEQYSDIGGLDKQIQELIEAVVLPMTHKDRFKAIGIQPPK
GVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGSKLVRDA
FQLAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ
PNHDIKVIAATNRVDILDPALLRSGRLDRKIEFPAPNEEARARIMQIHSR
KMNVAKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGADRVVHEDFM
DAILEVQARKKTTLNYYA*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0000502	proteasome complex
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0008540	proteasome regulatory particle, base subcomplex
GO:0031595	nuclear proteasome complex
GO:0031597	cytosolic proteasome complex

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell
PLANA:0000142	posterior region of the whole animal

Vocabulary: **INTERPRO**
Term	Definition
IPR005937	26S_Psome_P45-like
IPR032501	Prot_ATP_ID_OB
IPR041569	AAA_lid_3
IPR003593	AAA+_ATPase
IPR003959	ATPase_AAA_core
IPR027417	P-loop_NTPase
IPR003960	ATPase_AAA_CS

Vocabulary: **molecular function**
Term	Definition
GO:0005524	ATP binding
GO:0000166	nucleotide binding
GO:0008233	peptidase activity
GO:0016787	hydrolase activity
GO:0017025	TBP-class protein binding
GO:0036402	proteasome-activating ATPase activity

Vocabulary: **biological process**
Term	Definition
GO:0006508	proteolysis
GO:0030163	protein catabolic process
GO:0030433	ubiquitin-dependent ERAD pathway
GO:0045899	positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:1901800	positive regulation of proteasomal protein catabolic process

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..36
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 336..406 e-value: 1.2E-22 score: 81.4
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 30..153 e-value: 5.0E-19 score: 70.2
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 154..335 e-value: 9.4E-64 score: 216.5
None	No IPR available	PANTHER	PTHR23073:SF90	26S PROTEASOME REGULATORY SUBUNIT 6A	coord: 6..417
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 6..417
None	No IPR available	CDD	cd00009	AAA	coord: 168..334 e-value: 9.52991E-25 score: 97.2167
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 198..337 e-value: 3.6E-22 score: 89.7
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 26..405 e-value: 2.7E-126 score: 419.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 202..334 e-value: 5.4E-42 score: 143.3
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 68..144 e-value: 3.9E-19 score: 68.4
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 357..401 e-value: 7.4E-11 score: 41.7
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 305..323
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 161..408